tsantsR is an R package created for bacterial network analysis. Given different treatment groups it identifies networks of bacteria that are most changed between the groups. tsantsR provides functionality for functional profiling to explore the potential biological roles of the network of bacteria. The package supports constructing, subnetwork and downstream analysis, and visualization.
The current stable release is v0.4.0. To install this version, use the following command:
remotes::install_github("abi-am/tsantsR", ref = "v0.4.0")
To install the latest developmental version (including any recent changes made after the release), run:
remotes::install_github("abi-am/tsantsR")