Add binned summary statistic aggregation for genomic intervals — Closes #61#62

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conradbzura wants to merge 17 commits intomainfrom

61-binned-coverage-operator

Commits on Mar 26, 2026

feat: Add GIQLCoverage expression node and parser registration
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feat: Add CoverageTransformer for binned genome coverage
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test: Add parsing and transpilation tests for COVERAGE operator
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docs: Add COVERAGE operator reference and recipes
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feat: Support => (standard SQL) named parameter syntax in COVERAGE
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fix: Stop treating = as named parameter syntax in COVERAGE
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refactor: Remove dead code and fix LATERAL syntax for DuckDB compat
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feat: Add target parameter and default alias to COVERAGE operator
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fix: Move COVERAGE WHERE clause into LEFT JOIN ON condition
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test: Rewrite COVERAGE tests to spec with full API coverage
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test: Add unit tests for bedtools test utilities
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test: Add unit tests for GIQL parsing, generation, and transpilation
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test: Add bedtools integration tests for operator correctness
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docs: Clarify score column reference and add sample output table
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test: Add property-based tests for COVERAGE transpilation
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fix: Align unit tests with := named parameter syntax and fix CTE preservation
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fix: Compare only coordinates in merge-then-intersect workflow test
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