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convertingNRRD
Ander Arbelaiz edited this page Jul 1, 2014
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The convertNRRD.py script allows you to convert a NRRD file into an atlas. It does not search recursively for several NRRD files.
The script requires the following python packages:
- PIL
- pynrrd
- NumPy
- ndimage, misc from SciPy library
The script takes two input arguments. The <InputFile> containing the volume data .nrrd file and the <OutputFile> name where the atlas will be stored. In case the output path does not exists, it will be created.
python convertDICOM.py <InputFile> <OutputFileName>