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2 changes: 1 addition & 1 deletion docs/tutorial/getting-started_1.rst
Original file line number Diff line number Diff line change
Expand Up @@ -235,7 +235,7 @@ After the training script is prepared, we can start the training by simply runni

.. code-block:: bash

CPtrain.py train -i input.yaml
CPtrain.py train -i train.yaml


The code generates ``stdout`` like
Expand Down
1 change: 1 addition & 0 deletions examples/CPtrain/cptrain_pred_v3/README.md
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@@ -0,0 +1 @@
CPtrain.py pred -i config.yaml
25 changes: 25 additions & 0 deletions examples/CPtrain/cptrain_pred_v3/config.yaml
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@@ -0,0 +1,25 @@
general:
bondfilename: methanol.mol
savedir: dipole_10ps/
temperature: 300
timestep: 0.484
descriptor:
calc: 1
directory: ./
xyzfilename: IONS+CENTERS+cell_sorted_merge.xyz
savedir: dipole_10ps/
descmode: 2
desctype: allinone
haswannier: 1
interval: 1
desc_coh: 0
Rcs: 4
Rc: 6
predict:
calc: 1
desc_dir: dipole_10ps/
model_dir: model_met/
device: cpu
modelmode: rotate
bondspecies: 4
save_truey: 0
26 changes: 26 additions & 0 deletions examples/CPtrain/cptrain_pred_v3/dipole_10ps_ref/input.yaml
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@@ -0,0 +1,26 @@
descriptor:
Rc: 6
Rcs: 4
calc: 1
desc_coh: 0
descmode: 2
desctype: allinone
directory: ./
haswannier: 1
interval: 1
savedir: dipole_10ps/
xyzfilename: IONS+CENTERS+cell_sorted_merge.xyz
general:
bondfilename: methanol.mol
itpfilename: methanol.acpype/input_GMX.mol
savedir: dipole_10ps/
temperature: 300
timestep: 0.484
predict:
bondspecies: 4
calc: 1
desc_dir: dipole_10ps/
device: cpu
model_dir: model_rotate_methanol/
modelmode: rotate
save_truey: 0
1,004 changes: 1,004 additions & 0 deletions examples/CPtrain/cptrain_pred_v3/dipole_10ps_ref/total_dipole.txt

Large diffs are not rendered by default.

16 changes: 16 additions & 0 deletions examples/CPtrain/cptrain_pred_v3/methanol.mol
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@@ -0,0 +1,16 @@
input_GMX.gro created by acpype (v: 2022.7.21) on Sat Dec 10 16:39:17 2022
OpenBabel08222309493D

6 5 0 0 0 0 0 0 0 0999 V2000
0.9400 0.0200 -0.0900 C 0 0 0 0 0 0 0 0 0 0 0 0
0.4700 0.2700 -1.4000 O 0 0 0 0 0 0 0 0 0 0 0 0
0.5800 -0.9500 0.2400 H 0 0 0 0 0 0 0 0 0 0 0 0
0.5700 0.8000 0.5800 H 0 0 0 0 0 0 0 0 0 0 0 0
2.0400 0.0200 -0.0900 H 0 0 0 0 0 0 0 0 0 0 0 0
0.8100 1.1400 -1.6700 H 0 0 0 0 0 0 0 0 0 0 0 0
1 5 1 0 0 0 0
1 3 1 0 0 0 0
1 4 1 0 0 0 0
2 1 1 0 0 0 0
6 2 1 0 0 0 0
M END
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