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This repository was archived by the owner on Jul 16, 2025. It is now read-only.
A Suffix-Tree-Based Database for Sequence Alignment
mstrdb, short for Mines Suffix Tree Database, is a database that constructs suffix trees on-disk for more efficient
sequence alignment. See the report for a more detailed explanation.
A sample usage can be seen in main.py.
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mstrdb (Mines Suffix Tree Database), a database using on-disk suffix trees for more efficient DNA sequence alignment.