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mstrdb (Mines Suffix Tree Database), a database using on-disk suffix trees for more efficient DNA sequence alignment.

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License: GPL v3

mstrdb

A Suffix-Tree-Based Database for Sequence Alignment

mstrdb, short for Mines Suffix Tree Database, is a database that constructs suffix trees on-disk for more efficient sequence alignment. See the report for a more detailed explanation.

A sample usage can be seen in main.py.

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mstrdb (Mines Suffix Tree Database), a database using on-disk suffix trees for more efficient DNA sequence alignment.

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