This is a collection of scripts I use (or have used in the past) to perform statistical tests for genomic surveillance studies, especially those within Global Pneumococcal Sequencing (GPS) project https://www.pneumogen.net/gps/. They are free to use by anyone else for any purpose, but come with no assurances or guarantees of correctness or functionality.
StephanieWLo/Genomic-Surveillance
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