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Add omics runtime skill pack#27

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zongtingwei wants to merge 7 commits intoRunchuan-BU:mainfrom
zongtingwei:skills/add-omics-runtime-pack-rebuilt
Closed

Add omics runtime skill pack#27
zongtingwei wants to merge 7 commits intoRunchuan-BU:mainfrom
zongtingwei:skills/add-omics-runtime-pack-rebuilt

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@zongtingwei
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Summary

This PR adds a curated omics runtime skill pack for BioClaw and updates the repository README files to clarify the skills contribution path.

Included runtime skills:

  • scrna-preprocessing-clustering
  • cell-annotation
  • chip-seq
  • atac-seq
  • differential-expression
  • proteomics
  • metagenomics
  • structural-biology

Each runtime skill is placed under container/skills/<skill-name>/ with a flat layout that matches the current container sync behavior:

  • SKILL.md
  • technical_reference.md
  • commands_and_thresholds.md

This PR also updates README.md and README.zh-CN.md to state that new BioClaw-compatible skills should first be contributed to Bioclaw_Skills_Hub, and that validated skills may later be promoted into the main BioClaw repository.

Notes

  • The installer skill remains at .claude/skills/add-omics-runtime-pack/SKILL.md
  • The eight runtime skill folders live under container/skills/
  • The README updates are limited to contribution-path messaging in the project header area

@zongtingwei zongtingwei reopened this Mar 25, 2026
@zongtingwei
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Closing this PR because it was opened from the wrong branch and includes unrelated runtime-skill-pack changes. A clean README-only replacement has been opened as #28.

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