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Update LIST.md and SELECTED.md #42

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hojae-m-choi May 9, 2025
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hojae-m-choi May 9, 2025
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3 changes: 3 additions & 0 deletions references/LIST.md
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Expand Up @@ -36,5 +36,8 @@ Bengio, Emmanuel, Moksh Jain, Maksym Korablyov, Doina Precup, and Yoshua Bengio.
###### ArXiv, 2024, Structure-Based Drug Design, Target-Conditioned `GFlowNet`
Shen, Tony, Seonghwan Seo, Grayson Lee, Mohit Pandey, Jason R. Smith, Artem Cherkasov, Woo Youn Kim, and Martin Ester. 2024. “TacoGFN: Target-Conditioned GFlowNet for Structure-Based Drug Design.” arXiv. http://arxiv.org/abs/2310.03223.

###### ICLR, 2025, Synthesizable and score guided drug design, `GFlowNet`
Seo, Seonghwan, Minsu Kim, Tony Shen, Martin Ester, Jinkyoo Park, Sungsoo Ahn, and Woo Youn Kim. 2024. “Generative Flows on Synthetic Pathway for Drug Design.” arXiv. http://arxiv.org/abs/2410.04542.

###### ArXiv, 2024, Synthesizable Analog Generation, `Transformer`
Luo, Shitong, Wenhao Gao, Zuofan Wu, Jian Peng, Connor W. Coley, and Jianzhu Ma. 2024. “Projecting Molecules into Synthesizable Chemical Spaces.” arXiv. http://arxiv.org/abs/2406.04628.
2 changes: 2 additions & 0 deletions references/SELECTED.md
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Expand Up @@ -13,6 +13,8 @@ Lu, Wei, Jixian Zhang, Weifeng Huang, Ziqiao Zhang, Xiangyu Jia, Zhenyu Wang, Le
###### Nature, 2023, de novo Protein Design, `Diffusion`
Watson, Joseph L., David Juergens, Nathaniel R. Bennett, Brian L. Trippe, Jason Yim, Helen E. Eisenach, Woody Ahern, et al. 2023. “De Novo Design of Protein Structure and Function with RFdiffusion.” Nature 620 (7976): 1089–1100. https://doi.org/10.1038/s41586-023-06415-8.

###### ICLR, 2025, Synthesizable and score guided drug design, `GFlowNet`
Seo, Seonghwan, Minsu Kim, Tony Shen, Martin Ester, Jinkyoo Park, Sungsoo Ahn, and Woo Youn Kim. 2024. “Generative Flows on Synthetic Pathway for Drug Design.” arXiv. http://arxiv.org/abs/2410.04542.

##### Jae Young

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