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Palmer Lab

Behavioral Genetics of Mice, Rats and Men

5 followers
United States of America
https://palmerlab.org/

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HS-Rats-Genotyping-Pipeline HS-Rats-Genotyping-Pipeline Public

Heterogeneous Stock Rats Lc-WGS Genotyping Pipeline from UCSD Palmer Lab

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Showing 10 of 17 repositories

HS-Rats-Complex-Variants-eQTL-Paper Public
Code and analysis for HS rats complex variants eQTL paper

Palmer-Lab-UCSD/HS-Rats-Complex-Variants-eQTL-Paper’s past year of commit activity

Shell 0 MIT 0 0 0 Updated Mar 6, 2026
breedHS Public
pedigree processing and breeder pairing for the HS West colony at UCSD

Palmer-Lab-UCSD/breedHS’s past year of commit activity

R 0 0 0 0 Updated Mar 2, 2026
gview Public
A web-service for visualizing genetic association studies

Palmer-Lab-UCSD/gview’s past year of commit activity

TypeScript 0 MIT 0 0 0 Updated Feb 28, 2026
palmerdb_streamlit Public
A Streamlit application for viewing database summaries.

Palmer-Lab-UCSD/palmerdb_streamlit’s past year of commit activity

Python 0 MIT 0 0 0 Updated Feb 23, 2026
rattaca_assignment Public
The algorithm used for assigning RATTACA rats to various projects based on their predicted trait values

Palmer-Lab-UCSD/rattaca_assignment’s past year of commit activity

Python 0 MIT 0 0 0 Updated Feb 9, 2026
rattaca Public
An R package for genomic prediction of phenotypes in HS rats

Palmer-Lab-UCSD/rattaca’s past year of commit activity

R 0 MIT 0 4 0 Updated Dec 22, 2025
hgrm Public
Computing genetic relationship matrix from expected haplotype counts.

Palmer-Lab-UCSD/hgrm’s past year of commit activity

C++ 0 MIT 1 0 0 Updated Dec 11, 2025
HSrat_delaydiscounting Public
Phenotypic and genetic analysis for delay discounting

Palmer-Lab-UCSD/HSrat_delaydiscounting’s past year of commit activity

0 0 0 0 Updated Aug 7, 2025
hwas Public
Palmer Lab pipeline for haplotype wide association study

Palmer-Lab-UCSD/hwas’s past year of commit activity

Python 0 MIT 0 2 0 Updated Apr 10, 2025
argparse Public
Command line argument parsing for R scripts

Palmer-Lab-UCSD/argparse’s past year of commit activity

R 0 MIT 0 0 0 Updated Mar 20, 2025

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