Post naming updates #18
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Fixed spelling of "associated" and "Auxiliary" in the database structure section.
- Switch water potential example from Sorghum to Quercus - Add tidyr library import - Improve plot aesthetics (flip axes, filter by sample size) - Add study timeline filtering for better visualization - Expand time series analysis section with daily aggregation, autocorrelation, and decomposition - Fix join conditions to include plot_id - Add data completeness checks (drop_na, sample size filtering)
…tials Modified the chamber water potential example to display only the 20 species with the lowest (most extreme) water potentials instead of all species, improving readability and adding a fill color to the bar plot.
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Vignette Improvements: Enhanced Readability and Clarity
Overview
This PR significantly improves the DuckDB vignette by fixing technical inaccuracies, clarifying database structure, and simplifying visualizations for better readability. It also represents a manual QA/QC to ensure all vignette code operates after column name changes to database schema.
Changes Made
Documentation
Visualization Improvements
Time Analysis Plot (Multi-table Block, Plot 1)
Study Timeline Plot (Multi-table Block, Plot 2)
Species Bar Chart (Visualizations Section)
Impact
These changes make the vignette more accurate as a reference document, easier to follow for new users, and provide clearer visual insights into PSInet database structure and contents. The visualizations now effectively communicate key patterns without overwhelming readers with excessive detail.