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PM-0125/README.md

🧠 Pranjul Mishra — Machine Learning Engineer (NLP • RAG • MLOps • Data Pipelines)

Location Email LinkedIn GitHub

I design and build end-to-end ML systems, NLP/RAG pipelines, and production-grade Python/MLOps tooling.
My engineering focus is on reproducibility, structured retrieval, robust data pipelines, and clean, testable ML code.

I specialize in:

  • NLP / RAG systems (structured retrieval, SPARQL reasoning, knowledge-graphs)
  • Model reproducibility (MLflow, DVC, deterministic pipelines)
  • Python engineering (packaging, CI/CD, testing, modular design)
  • High-performance data processing (parallel pipelines, QC systems)

I care about building ML systems that are reliable, interpretable, and easy for others to run and extend.

🔭 What I’m Working On

🧬 SvPhaser — High-Performance SV Phasing Pipeline

Parallel, chromosome-aware phasing tool with confidence scoring.
Packaged as a CLI with full tests, CI, and docs.
➡️ https://github.com/SFGLab/SvPhaser

📚 INFERMed — Clinical RAG/NLP System with SPARQL Reasoning

A complete clinical retrieval assistant using DrugBank/FDA/PubChem RDF, multi-stage retrieval, and structured evidence reasoning.
➡️ https://github.com/PM-0125/INFERMed

📡 LOPHOS — Reproducible Data Processing & QC Pipeline

Format-aware parsing, QC metrics, deterministic workflows, and reproducible CLI tooling (pytest/mypy/ruff + CI).
➡️ https://github.com/SFGLab/lophos

🧰 Core Engineering Skills

Languages: Python · C++ · SQL · SPARQL
ML/AI: PyTorch · TensorFlow · XGBoost · scikit-learn · NLP · RAG · Feature Engineering
MLOps: MLflow · DVC · Docker · Conda · GitHub Actions · CI/CD · pytest · mypy · ruff · black
Data/DB: Pandas · NumPy · PostgreSQL · MySQL · RDF Knowledge Graphs · Apache Jena · QLever
Dev/Platforms: Linux · Git/GitLab · VS Code · Google Colab · GCP (Cloud Run / Vertex AI basics)

🌟 Featured Projects (ML / NLP / Data Engineering)

🧬 SvPhaser

Parallel SV phasing with confidence scoring; shipped as a reproducible CLI tool with tests/CI/docs.
➡️ https://github.com/SFGLab/SvPhaser

🧠 INFERMed — Clinical Retrieval System

RAG-style structured retrieval + reasoning over biomedical knowledge graphs.
➡️ https://github.com/PM-0125/INFERMed

📡 LOPHOS — Deterministic Data Processing

High-performance QC pipeline with reproducible environments and automation.
➡️ https://github.com/SFGLab/lophos

🔍 Structural Variant Detection

Algorithmic pipeline integrating read-depth and split-read signals.
➡️ https://github.com/PM-0125/Computational-Genomics/tree/main/Structural_Variant_Detection_Algorithm

🧪 Breast Cancer Survival Analysis

Comparative ML modelling (XGBoost/PCA/IF) on the METABRIC dataset.
➡️ https://github.com/PM-0125/AI_ML_Projects/tree/main/Advanced%20Breast%20Cancer%20Analysis

🎓 Education

  • M.Sc., Computer Science & Information Systems (AI) — Warsaw University of Technology
  • B.Tech., Computer Engineering (AI) — Marwadi University

📺 AI Pathfinders — Latest Videos

I teach ML in a practical, builder-first way.

Introduction | Artificial Intelligence | Education For All (Part 1) Decoding AI: AI vs ML vs Deep Learning The Machine Learning Landscape - Part 1

🤝 Contact

📧 Email: pranjulmishra228161@gmail.com
🔗 LinkedIn: https://www.linkedin.com/in/pranjul-mishra/
💻 GitHub: https://github.com/PM-0125

Pinned Loading

  1. AI_ML_Projects AI_ML_Projects Public

    This code snippet contains algorithms of automatic essay grading using Attention Mechanism. It is a technique of RNN in deep learning!

    Jupyter Notebook 2

  2. Computational-Genomics Computational-Genomics Public

    This repository contains my findings and my work on Genomic Data Analysis

    Python 1

  3. INFERMed INFERMed Public

    Intelligent Navigator for Fused Evidence-based Retrieval in Medicine

    Python

  4. SFGLab/SvPhaser SFGLab/SvPhaser Public

    Optimal Tool to Phase Structural Variants

    Python 1

  5. ashreya2003/Academic-Advisor-using-RAG ashreya2003/Academic-Advisor-using-RAG Public

    RAGAdvisor is a simple AI-powered academic advisor bot built using Google Gemini and Retrieval-Augmented Generation (RAG). It helps students by understanding their academic records (in JSON format)…

    CSS

  6. SFGLab/lophos SFGLab/lophos Public

    LOPHOS — LOops & Peaks HaplOtype phasing Suite Allele-specific peak & loop phasing for HiChIP data.

    Python