wip API overview update

[SimoneAriens]

• LR endpoints added
• prepare-mark endpoints updated with most recent info (mainly rotate_crop_and_mask_image_by_crop which now asks for a different input, which leads to a different input from the user. And rotation_angle is not necessary anymore)

will finish this in the next sprint

[github-actions]

Diff Coverage

Diff: origin/main..HEAD, staged and unstaged changes

No lines with coverage information in this diff.

[github-actions]

Package	Line Rate	Branch Rate	Health
.	96%	88%	✔
comparators	100%	100%	✔
container_models	99%	100%	✔
conversion	97%	86%	✔
conversion.export	100%	100%	✔
conversion.filter	92%	83%	✔
conversion.leveling	100%	100%	✔
conversion.leveling.solver	100%	75%	✔
conversion.plots	98%	85%	✔
conversion.preprocess_impression	99%	91%	✔
conversion.preprocess_striation	89%	58%	✔
extractors	98%	75%	✔
parsers	98%	80%	✔
parsers.patches	89%	60%	✔
preprocessors	95%	75%	✔
processors	100%	100%	✔
renders	98%	50%	✔
utils	91%	75%	✔
Summary	96% (1907 / 1980)	81% (201 / 248)	✔

Minimum allowed line rate is 50%