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Updated Docs Site with new Active Release Manifest #288

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@cpreid2 cpreid2 commented Apr 9, 2020

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wwysoc2 and others added 30 commits January 30, 2025 10:37
@wwysoc2
Merge pull request #450 from NCI-GDC/dr42_manifests
fa1c5af 
DR42 manifests
@wwysoc2
VCF issue notes
94adbe3
@wwysoc2
Removed varscan line
ca168d3
@wwysoc2
Removed extra return
0970f09
@wwysoc2
Merge pull request #451 from NCI-GDC/bioinfo_note
411c2be 
Bioinfo note
@clsackett
Updating link
3c95d61 
Updating link
@clsackett
Fixing URL again
2cc1b4c 
Fixing URL again
@wwysoc2
Merge pull request #452 from NCI-GDC/quick_fixes
2450749 
Updating link
@clsackett
Update Data_Release_Notes.md
1aed838
@wwysoc2
Merge pull request #453 from NCI-GDC/quick_fixes
a92ab40 
Update Data_Release_Notes.md
@wwysoc2
Merge pull request #454 from NCI-GDC/develop
be8fec1 
DR42 Prod Deployment
@clsackett
Remove AWG portal documentation
6790fcb 
Remove AWG portal documentation per https://gdc-ctds.atlassian.net/browse/DOC-446
@clsackett
Merge pull request #455 from NCI-GDC/remove_AWG_portal_doc
19225b7 
Remove AWG portal documentation
@wwysoc2
Changed markdown to HTML - will not render in table
5646a01
@wwysoc2
Merge pull request #456 from NCI-GDC/fix_video
0206579 
Changed markdown to HTML - will not render in table
@wwysoc2
Merge pull request #457 from NCI-GDC/develop
42327f0 
Fix video page - mkdown to HTML
@clsackett
Update MAF_Format doc
a13750c 
Update MAF_Format doc per https://gdc-ctds.atlassian.net/browse/DOC-420
@clsackett
Updating API User's Guide
3965759 
Updating API User's Guide per https://gdc-ctds.atlassian.net/browse/DOC-229
@clsackett
Updating API Appendix A
f2eacd9 
Updating API Appendix A per https://gdc-ctds.atlassian.net/browse/DOC-200
@clsackett
Add cnv_change_5_category to API documentation
97ce9c6 
Add cnv_change_5_category to API documentation
@amlehman
PEAR-2284 - Add the GDC Apps menu to the documentation site (#439)
0d9cd3b 
* PEAR-2284 - add apps menu to doc site

* PEAR-2284 - Move app menu out to its own partial

* PEAR-2284 - move extra js to mkdocs.yml
@wwysoc2
Merge branch 'develop' into update_API_doc
13c389e
@wwysoc2
Merge pull request #460 from NCI-GDC/update_API_doc
c140bb0 
Updating API User's Guide
@clsackett
Fix typo
2381a02 
Fix typo
@clsackett
Merge pull request #462 from NCI-GDC/cnv_5_cat_api_doc
44752bd 
Add cnv_change_5_category to API documentation
@clsackett
Merge pull request #461 from NCI-GDC/update_API_AppendixA
353f366 
Updating API Appendix A
@ebusygina
scRNA-Seq Gene Expression Endpoints - Data Analysis API doc
f166cee
@ebusygina
Added info that scRNA-Seq API supports up to 10 genes
e9eac9a
@ebusygina
Deleted info about HDF5 files and changed examples values to float
4a2176b
@wteouchicago
first draft of roentgen release notes
bac843e
wwysoc2 and others added 30 commits October 29, 2025 09:22
@wwysoc2
Merge pull request #535 from NCI-GDC/DOC-503_move_page_to_archive
97306b7 
Removes old files from search, skips false positives for detect secrets
@wwysoc2
Mistake with experimental strategy
a6dc1c2
@wwysoc2
Merge pull request #541 from NCI-GDC/dr44-rns
3925b98 
Mistake with experimental strategy
@wwysoc2
Added correct IDs
a42beee
@wwysoc2
Merge pull request #543 from NCI-GDC/dr44_manifest_fix
8052549 
Added correct IDs
@wwysoc2
Slide Image correction
8e91172
@wwysoc2
Merge pull request #545 from NCI-GDC/dr44-rn-correction
d199856 
Slide Image correction
@wteouchicago
DOC-507 properly hide old docs from view
faad982
@wteouchicago
DOC-494 adds section on Annotations Browser to Quick Start
598bae8
@wteouchicago
adds link to encyclopedia entry on annotations
eb9595b
@wteouchicago
updates encyclopedia page
73b0ebf
@wwysoc2
Merge pull request #548 from NCI-GDC/DOC-494_add_annotations_browser_…
1aad209 
…info

DOC 494 add annotations browser info
@ebusygina
DOC-281: Encyclopedia TCGA_Barcode table fix
e90ca47
@ebusygina
DOC-119: added excludeifany desc to API docs
9fe93ed
@ebusygina
Updated excludeifany API operator description
7dcb1ec
@ebusygina
updated exclude and excludeifany API operators description and added …
3259e23 
…examples
@ebusygina
Added links to Code Tables Report
84162f3
@ebusygina
Fixed typo in the Barcode Types table header
f7b4fc2
@ebusygina
Merge pull request #549 from NCI-GDC/evgeniia_DOC-281_Encyclopedia_TC…
8d4ac55 
…GA_Barcode

DOC-281: Encyclopedia TCGA_Barcode fix
@ebusygina
Changed the example description according to Wendy's comment
bfbf807
@ebusygina
Merge pull request #550 from NCI-GDC/evgeniia_DOC-119_excludeifany_ap…
8eb06d3 
…i_operator

DOC-119: excludeifany api operator
@ebusygina
DOC-480: Update the One_Consequence definition in the MAF Format docu…
0280b66 
…mentation
@ebusygina
Merge pull request #551 from NCI-GDC/evgeniia_DOC-480_One_Consequence…
2cca657 
…_MAF_format_documentation

DOC-480: Update the One_Consequence definition in the MAF Format documentation
@wwysoc2
First draft release notes
ac1bfcc
@wwysoc2
Added ALCHEMIST treatment arm lists
6c90761
@wteouchicago
Merge pull request #547 from NCI-GDC/DOC-507_properly_remove_old_pages
f670b32 
DOC-507 properly hide old docs from view
@wwysoc2
Removed extra info and case lists
8a51584
@wwysoc2
Added manifest links
72e91c4
@wwysoc2
Added line about added HCMI case
b0fe3fa
@wwysoc2
Merge pull request #552 from NCI-GDC/DR45-notes
ea661a7 
DR45 release notes
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