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1. de-novo-transcriptome-assembly-pipeline de-novo-transcriptome-assembly-pipeline Public

   Combined de novo transcriptome assembly - multiple assemblers - multiple parameters

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2. Metagenomic-analysis-workshop Metagenomic-analysis-workshop Public

   The National Center for Genome Analysis Support (NCGAS) offers a three-day workshop on High Performance Computing (HPC) usage and metagenomic analysis between October 7th to 9th, 2019.

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3. Metagenomics-Workshop-Spring-2020 Metagenomics-Workshop-Spring-2020 Public

   NCGAS is hosting a metagenomics workshop, focusing on whole genome sequencing metagenome analysis between April 20th to 22nd at Indiana University, Bloominton.

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4. Transcriptome-Assembly-Workshop-Spring-2019 Transcriptome-Assembly-Workshop-Spring-2019 Public

   NCGAS national level workshop on de novo transcriptome assembly on April 29th to May 1st

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5. Useful-Scripts Useful-Scripts Public

   Some useful scripts we use all the time

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6. CEWiT-REU-Identifying-datasets-in-SRA-using-Jetstream CEWiT-REU-Identifying-datasets-in-SRA-using-Jetstream Public

   This is a workflow developed with CEWiT REU students and NCGAS (2018- 2019) to search the sequence read archive (SRA) to identify other datasets with a genome of interest.

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