Refactor API for better consistency and documentation

.python-version

@@ -0,0 +1 @@
+3.9

.readthedocs.yaml

@@ -16,7 +16,8 @@ build:
     # golang: "1.19"
   jobs:
     post_install:
-      - pip install .[docs]
+      - pip install mkdocs-material "mkdocstrings[python]" mkdocs-jupyter markdown pymdown-extensions
+      - pip install .
 
 # Build documentation in the "docs/" directory with Sphinx
 mkdocs:

mkdocs.yml

@@ -11,6 +11,7 @@ nav:
         - 'License': license.md
     - Tutorials:
         - tutorials/index.md
+        - 'Using Circumplex Instrument': tutorials/using-instruments.ipynb
         - 'Introduction to SSM': tutorials/Intro_to_SSM_Analysis.ipynb
         - 'Random Examples': tutorials/Random_exs.ipynb
     - 'API reference':

pyproject.toml

@@ -1,41 +1,44 @@
 [project]
 name = "circumplex"
-version = "0.1.3"
+version = "0.1.4"
 description = "A Python package for analyzing and visualizing circumplex data"
 authors = [
     {name = "Andrew Mitchell", email = "andrew.mitchell.18@ucl.ac.uk"},
 ]
 dependencies = [
     "numpy>=1.25.2",
-    "matplotlib>=3.8.1",
     "scipy>=1.9.3",
-    "pandas[excel]>=2.1.0",
+    "pandas[excel,performance]>=2.2.2",
+    "matplotlib>=3.9.4",
+    "seaborn>=0.13.2",
 ]
-requires-python = ">=3.11"
 readme = "README.md"
-license = {text = "GNU-GPLv3"}
+requires-python = ">= 3.9"
 
 [project.urls]
 repository = "https://github.com/MitchellAcoustics/circumplex"
 documentation = "https://circumplex.readthedocs.io/en/latest/"
 
-[project.optional-dependencies]
-test = [
-    "pytest>=7.4.3",
-    "flake8>=6.1.0",
-]
-docs = [
+[build-system]
+requires = ["hatchling"]
+build-backend = "hatchling.build"
+
+[tool.uv]
+managed = true
+dev-dependencies = [
+    "pytest>=8.2.2",
     "jupyter>=1.0.0",
-    "mkdocs>=1.5.3",
-    "mkdocs-material>=9.4.8",
-    "mkdocstrings[python]>=0.23.0",
-    "mkdocs-jupyter>=0.24.6",
-    "markdown>=3.5.1",
-    "pymdown-extensions>=10.4",
-]
-dev = [
-    "setuptools>=68.2.2",
+    "mkdocs>=1.6.0",
+    "mkdocs-material>=9.5.26",
+    "mkdocstrings[python]>=0.25.1",
+    "mkdocs-jupyter>=0.24.7",
+    "markdown>=3.6",
+    "pymdown-extensions>=10.8.1",
+    "pytest-notebook>=0.10.0",
 ]
-[build-system]
-requires = ["pdm-backend"]
-build-backend = "pdm.backend"
+
+[tool.hatch.metadata]
+allow-direct-references = true
+
+[tool.hatch.build.targets.wheel]
+packages = ["src/circumplex"]