Allow Installation on newer Python versions and ARM64 Mac#9
Open
robertschweizer wants to merge 2 commits intoMIC-DKFZ:developfrom
Open
Allow Installation on newer Python versions and ARM64 Mac#9robertschweizer wants to merge 2 commits intoMIC-DKFZ:developfrom
robertschweizer wants to merge 2 commits intoMIC-DKFZ:developfrom
Conversation
- Add missing dependencies - Stop duplicating dependency definition in requirements.txt - Add requirements-py39.txt with a fixed, working version set - Allow running tests on GPU
This allows installation on Python 3.12. For safety, this includes a requirements-py312.txt with a proven-to-work set of dependencies. I ran the tests: test_npy_inference find tiny differences (less than 0.01%) in the exact prediction scores. This is probably acceptable.
|
Just tested locally by cloning, taking the present branch, and installing using Works perfectly on
There was just an error related to the Numpy version that was installed that was not the one of the requirement (2.1.3 instead of 1.26.4). Easily fixed by manually reinstalling the good version with |
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
2 participants
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
Installing and using bpreg from PyPI would become easier with this, but it introduces the constant risk of new versions breaking something. That's why I added two new requirements files with proven-to-work version combinations.
See commit messages.