Skip to content

Conversation

@dependabot
Copy link

@dependabot dependabot bot commented on behalf of github Jul 28, 2022

Updates the requirements on snakemake to permit the latest version.

Release notes

Sourced from snakemake's releases.

v7.11.0

7.11.0 (2022-07-27)

Features

  • improved resource handling in groups and ability to define resource scopes (global or per node), see docs and --help (#1218) (a8014d0)

Bug Fixes

  • fixed conda frontend detection and checking to also work with latest mambaforge (#1781) (225e68c)
Changelog

Sourced from snakemake's changelog.

7.11.0 (2022-07-27)

Features

  • improved resource handling in groups and ability to define resource scopes (global or per node), see docs and --help (#1218) (a8014d0)

Bug Fixes

  • fixed conda frontend detection and checking to also work with latest mambaforge (#1781) (225e68c)

7.10.0 (2022-07-26)

Features

  • Support conda environment definitions to be passed as function pointers, similar to input, params, and resources (#1300) (6f582f1)

Bug Fixes

  • fix regression in workflow source acquisition of google life science executor (#1773) (c07732e)
  • limit filename length of temporary files generated by the persistence backend (metadata, incomplete markers, etc.) (#1780) (59053e7)

7.9.0 (2022-07-19)

Features

  • make it possible to exclude rules that will be imported when using 'use rule' statement (#1717) (d9e0611)

Bug Fixes

  • add lock free mechanism for avoiding race conditions when writing persistence information; consider corrupt metadata records as non-existent (#1745) (71fe952)
  • conda python interpreter path on Windows (#1711) (155c9d6)
  • ensures that REncoder also checks for numpy.bool_ in encode_value (#1749) (10a6e1d)
  • Move quiet default after profile parsing (#1764) (6ade76d)

7.8.5 (2022-06-30)

Documentation

  • fix long description type for pypi (set to markdown) (d8d9b8f)

7.8.4 (2022-06-30)

... (truncated)

Commits
  • d01e777 chore(main): release 7.11.0 (#1783)
  • fbe5820 chore: fix version number in docs
  • a8014d0 feat: Group resources (#1218)
  • 225e68c fix: fixed conda frontend detection and checking to also work with latest mam...
  • 19cc2f4 chore(main): release 7.10.0 (#1770)
  • 59053e7 fix: limit filename length of temporary files generated by the persistence ba...
  • c07732e fix: fix regression in workflow source acquisition of google life science exe...
  • 6f582f1 feat: Support conda environment definitions to be passed as function pointers...
  • 9da571f chore(main): release 7.9.0 (#1768)
  • 155c9d6 fix: conda python interpreter path on Windows (#1711)
  • Additional commits viewable in compare view

Dependabot will resolve any conflicts with this PR as long as you don't alter it yourself. You can also trigger a rebase manually by commenting @dependabot rebase.


Dependabot commands and options

You can trigger Dependabot actions by commenting on this PR:

  • @dependabot rebase will rebase this PR
  • @dependabot recreate will recreate this PR, overwriting any edits that have been made to it
  • @dependabot merge will merge this PR after your CI passes on it
  • @dependabot squash and merge will squash and merge this PR after your CI passes on it
  • @dependabot cancel merge will cancel a previously requested merge and block automerging
  • @dependabot reopen will reopen this PR if it is closed
  • @dependabot close will close this PR and stop Dependabot recreating it. You can achieve the same result by closing it manually
  • @dependabot ignore this major version will close this PR and stop Dependabot creating any more for this major version (unless you reopen the PR or upgrade to it yourself)
  • @dependabot ignore this minor version will close this PR and stop Dependabot creating any more for this minor version (unless you reopen the PR or upgrade to it yourself)
  • @dependabot ignore this dependency will close this PR and stop Dependabot creating any more for this dependency (unless you reopen the PR or upgrade to it yourself)

Updates the requirements on [snakemake](https://github.com/snakemake/snakemake) to permit the latest version.
- [Release notes](https://github.com/snakemake/snakemake/releases)
- [Changelog](https://github.com/snakemake/snakemake/blob/main/CHANGELOG.md)
- [Commits](snakemake/snakemake@v7.8.0...v7.11.0)

---
updated-dependencies:
- dependency-name: snakemake
  dependency-type: direct:development
...

Signed-off-by: dependabot[bot] <support@github.com>
@dependabot dependabot bot added dependencies Pull requests that update a dependency file python Pull requests that update Python code labels Jul 28, 2022
@dependabot @github
Copy link
Author

dependabot bot commented on behalf of github Aug 1, 2022

Superseded by #12.

@dependabot dependabot bot closed this Aug 1, 2022
@dependabot dependabot bot deleted the dependabot/pip/snakemake-gte-7.8-and-lt-7.12 branch August 1, 2022 11:11
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

dependencies Pull requests that update a dependency file python Pull requests that update Python code

Projects

None yet

Development

Successfully merging this pull request may close these issues.

0 participants