PhenoDocs

VitePress Federation Hub — Aggregate documentation from multiple projects into a unified portal

Live Demo: https://kooshapari.github.io/phenodocs/

Shipping / full turn

Every merged wave should land via pull request to main (or a release branch), update CHANGELOG.md when the change is user-visible, and keep bun run build green for doc config changes. See docs/guides/full-turn-delivery.md and docs/guides/tooling.md.

Overview

PhenoDocs solves the problem of maintaining multiple documentation sites by providing a federation layer that:

• Aggregates docs from multiple projects into one searchable portal
• Auto-generates navigation from project structures
• Maintains separate views for different audiences (lab, docs, audit, kb)
• Indexes content for both human and AI consumption

Features

• 🚀 Fast — Static site generation with VitePress
• 🔗 Federated — Pull docs from multiple repositories
• 🤖 AI-Ready — .llms.txt generation for LLM context
• 🔍 Searchable — Full-text search across all projects
• 📊 Layered — Separate views for ideas, specs, audits, knowledge
• ⚙️ Automated — Git hooks for automatic updates

Quick Start

Installation

# Clone the repository
git clone https://github.com/yourorg/phenodocs.git
cd phenodocs

# Install JS deps (Bun) and Python tooling (uv, CPython 3.14+)
curl -fsSL https://bun.sh/install | bash   # if Bun not installed
curl -LsSf https://astral.sh/uv/install.sh | sh   # if uv not installed
bun install
uv sync --group dev

After cloning, use gh pr list / gh pr view (GitHub CLI) to see open PRs and merge status; gh pr view --web opens the current branch’s PR in the browser.

Running Locally

# Development server
bun run dev

# Build for production
bun run build

# Preview production build
bun run preview

# Oxlint + vue-tsc + link stub
bun run check

Generating the Hub

From a project using docs_engine:

docs hub --hub-dir ../phenodocs

Or programmatically:

from docs_engine.hub.generator import HubGenerator

projects = {
    "thegent": "/path/to/thegent/docs",
    "pheno-sdk": "/path/to/pheno-sdk/docs",
    "cliproxy": "/path/to/cliproxy/docs"
}

gen = HubGenerator(
    hub_dir="phenodocs",
    projects=projects
)
gen.generate()

Project Structure

phenodocs/
├── .vitepress/
│   ├── config.ts          # VitePress configuration
│   └── theme/
│       └── index.ts       # Custom theme
├── docs/                  # Hub documentation
│   ├── index.md          # Hub landing page
│   ├── guide/
│   │   └── getting-started.md
│   └── reference/
│       └── api.md
├── projects/             # Aggregated project docs (git submodule or external)
├── package.json
└── README.md

Documentation Layers

PhenoDocs organizes content into five layers:

Layer	View	Content Type
0	(internal)	Raw/ephemeral (conversation dumps, scratch notes)
1	/lab/	Ideas, research, debug logs
2	/docs/	PRDs, ADRs, specifications
3	/audit/	Changelogs, completion reports
4	/kb/	Retrospectives, knowledge extracts

Configuration

VitePress Config

// .vitepress/config.ts
import { defineConfig } from 'vitepress'

export default defineConfig({
  title: 'PhenoDocs',
  description: 'Federated documentation hub',
  themeConfig: {
    nav: [
      { text: 'Lab', link: '/lab/' },
      { text: 'Docs', link: '/docs/' },
      { text: 'Audit', link: '/audit/' },
      { text: 'KB', link: '/kb/' }
    ],
    sidebar: {
      '/docs/': [
        {
          text: 'Specifications',
          items: [
            { text: 'PRD', link: '/docs/prd' },
            { text: 'ADRs', link: '/docs/adr' }
          ]
        }
      ]
    }
  }
})

Adding a New Project

1. Add project to HubGenerator projects dict
2. Ensure project has proper frontmatter
3. Regenerate hub: docs hub
4. Commit changes

Integration with Docs Engine

PhenoDocs works with the docs_engine Python package:

# CLI
docs hub --hub-dir ../phenodocs

# MCP Tool
thegent_doc_hub_generate(hub_dir="../phenodocs")

Contributing

1. Fork the repository
2. Create a feature branch
3. Make your changes
4. Submit a PR

Building

bun run build
bun run preview

License

MIT License — see LICENSE for details.

Related Projects

• docs_engine — Agent-driven documentation lifecycle
• thegent — AI agent system
• pheno-sdk — SDK for Pheno APIs