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dead code cleanup #36

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Merged
eascarrunz merged 1 commit into from
Jun 19, 2025
Merged

dead code cleanup #36

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10 changes: 0 additions & 10 deletions bin/stats/utils.py
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Original file line number Diff line number Diff line change
Expand Up @@ -2,7 +2,6 @@
from numpy.typing import NDArray
from dataclasses import dataclass
import itertools
from itertools import permutations

BASE_TYPES = ["A", "C", "G", "T"]

Expand Down Expand Up @@ -40,15 +39,6 @@ def argmax(collection) -> int:

nucs = ('A', 'C', 'G', 'T')

def make_variant_header_dict():
nuc_pairs = permutations(nucs, 2)
keys = ((x, NUC_STR_TO_IND[y]) for x, y in nuc_pairs)
return {k:v for v, k in enumerate(keys)}

header_dict = make_variant_header_dict()

for item in header_dict.items():
print(item)

@dataclass(frozen=True, slots=True)
class SiteVariantData:
Expand Down