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Brief explanation

This repository contains some python files that I used for a pilot analysis to quantify beating and contractility in IPS-CMs using microscopy data (ie movies of beating IPS-CMs with high acquisition rate).

Currently, many project files reside in the ./dev directory, as this repository is under development.

(Update 2024/03.) I now moved most of the actual analysis code to functions, and there's an example on how to run this pipeline in the main_analysis_example.py file.

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  • Python 83.9%
  • Shell 16.1%