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error hicorr analysis for hicpro validpairs

Status: Open.

#12 In JinLabBioinfo/HiCorr;

· asaki1986 opened on Aug 19, 2025

The link to download the HindIII_HiCorr_ref.tar.gz seems to be dead

Status: Open.

#11 In JinLabBioinfo/HiCorr;

· YitingLi6 opened on Mar 31, 2025

Some trouble when converting HiCPro-format allValidPairs by reads_2_cis_frag_loop.pl

Status: Open.

#9 In JinLabBioinfo/HiCorr;

· mixOmix123 opened on Jan 25, 2024

Missing parameter in reads_2_cis_frag_loop.pl

Status: Open.

#8 In JinLabBioinfo/HiCorr;

· burgeng opened on Jan 18, 2024

reference genome issue

Status: Open.

#7 In JinLabBioinfo/HiCorr;

· LeeYEAH2 opened on Oct 18, 2023

call loop with micro-C

Status: Open.

#6 In JinLabBioinfo/HiCorr;

· ZianFang opened on Sep 29, 2023

HiCorr/bin/preprocess/pairing_two_SAM_reads.pl: No such file or directory

Status: Open.

#5 In JinLabBioinfo/HiCorr;

· PhilicJone opened on Jun 20, 2023

Error with Arima and HiC Pro

Status: Open.

#4 In JinLabBioinfo/HiCorr;

· aaronyangs opened on May 31, 2023

Apply to DNase Hi-C

Status: Open.

#1 In JinLabBioinfo/HiCorr;

· yongjieliu opened on Sep 17, 2020