add an option to handle the number of output poses #6
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
Update: Flexible Docking with Multiple Output Poses
Summary
Added the
inference_multiple_posesfunction insideinference_base.py, allowing users to specify the number of desired docking poses directly from the command line.🛠️ Usage
Users can now generate multiple docking poses by running:
Each docking pose is saved as a separate PDB file inside the output_poses/ directory.
A structured list of energy scores and file paths is also returned for downstream analysis.