URLs

• frontend tst: https://hivelab.tst.biochemistry.gwu.edu/biomuta
• frontend prd: https://hivelab.biochemistry.gwu.edu/biomuta

Data Release Pipeline

JSON documents to be loaded into MongoDB

/data/shared/repos/biomuta/json_exports/

Load data

Note to self: implement positional argument that takes the server instead of having to edit the script

cd /data/shared/repos/biomuta
senv # alias for source env/bin/activate
# Replace 'tst' or 'prd' with the correct environment if needed in mongo_port = config['dbinfo']['port']['tst']
python json_to_MongodbCollections.py