This assignment will require you to (1) build a bioconductor docker image from a dockerfile and (2) use the docker container to complete the microbiome tutorial. The microbiome package contains tools for microbiome analysis; with multiple example data sets from published studies; extending the phyloseq class. The package is in Bioconductor and aims to provide a comprehensive collection of tools and tutorials, with a particular focus on amplicon sequencing data. You will build a bioconductor docker image using a dockerfile and push the image to DockerHub. Docker Hub is a hosted repository service provided by Docker for finding and sharing container images with others.
- You can clone a GitHub repository.
- You have installed docker.
- You can pull/push to DockerHub from command-line.
| Rubric | Points |
|---|---|
| Part 1 | -/60 |
| Part 2 | -/140 |
| Total Points: -/200 |