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1. mvandenhi/sctree-public mvandenhi/sctree-public Public

   Code for scTree. To reproduce our results and run the model, we refer to the repository below

   Python

2. mvandenhi/sctree-supplementary-public mvandenhi/sctree-supplementary-public Public

   Jupyter Notebook

3. CancerFoundation CancerFoundation Public

   Forked from BoevaLab/CancerFoundation

   CancerFoundation: A single-cell RNA sequencing foundation model to decipher drug resistance in cancer

   Jupyter Notebook

4. scROSHI scROSHI Public

   Forked from ETH-NEXUS/scROSHI

   R

5. BoevaLab/CanSig-benchmark BoevaLab/CanSig-benchmark Public

   CanSig: a package to compare methods for discovering shared transcriptional states in cancer.

   Jupyter Notebook 4 1

6. BoevaLab/scSSL-Bench BoevaLab/scSSL-Bench Public

   Python 11