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Codex Academic Skills

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A curated list of research-oriented skills that work with OpenAI Codex.

This list is intentionally conservative. Each entry is included only when the upstream source is one of the following:

  • an official OpenAI Codex skill
  • a repository that explicitly documents Codex support
  • a repository that follows the open Agent Skills format Codex can read

Skill names below follow the upstream SKILL.md name or folder slug whenever possible, so install paths and prompt mentions stay close to the source repository.


Table of Contents


What Are Codex Skills?

Codex skills are folder-based instruction bundles that help Codex handle a task more reliably.

A typical skill usually includes:

  • a SKILL.md file with trigger rules and workflow guidance
  • optional scripts, templates, and references
  • a stable folder structure that Codex can discover from standard skill locations

In practice, a good skill works like a reusable playbook. Codex loads it when the task matches, follows the instructions, and combines that guidance with the local repository context.


Inclusion Rules

This list keeps entries that satisfy at least one of the following:

  • official OpenAI Codex skills
  • repositories that explicitly document Codex support
  • repositories built around the open Agent Skills format that Codex can consume with little or no adaptation

This list intentionally excludes:

  • skills that are exclusive to other platforms, such as Claude Code-only skills
  • document workflows that depend on platform-specific built-ins and do not translate cleanly into reusable Codex skills
  • repositories whose Codex compatibility is unclear

How To Use This List

Treat this repository as a research-workflow index, not a marketplace. The tables help narrow the search space; the upstream SKILL.md is still the source of truth.

If you are new to the list, a task-based pass is usually enough:

  • For workflow design, task decomposition, and context management, start with sections 1 and 2.
  • For paper writing, presentation work, and formal deliverables, start with sections 3 and 5.
  • For literature review and evidence synthesis, start with section 4.
  • For experiments, evaluation, fine-tuning, and reproducibility work, start with section 6.

Skill List

1. Planning and Workflow

Skill What It Does Link
project-development Helps scope LLM projects and design practical research-agent architectures. Agent-Skills-for-Context-Engineering
notion-research-documentation Researches across Notion and synthesizes cited briefs and reports. openai/skills
brainstorming-research-ideas Guides structured ideation for high-impact research directions. AI-Research-SKILLs
creative-thinking-for-research Applies creativity frameworks to generate novel research ideas. AI-Research-SKILLs
dspy Uses declarative prompt programming and optimizers to build structured research-agent workflows. AI-Research-SKILLs
instructor Produces Pydantic-validated structured outputs for extraction, labeling, and reliable research automation. AI-Research-SKILLs
outlines Constrains generation with grammars and finite-state machines for structured outputs and synthetic data workflows. AI-Research-SKILLs

2. Deep Thinking and Research Framing

Skill What It Does Link
context-fundamentals Explains how context works in agent systems. Agent-Skills-for-Context-Engineering
context-degradation Diagnoses lost-in-the-middle and other context failure modes. Agent-Skills-for-Context-Engineering
context-compression Compresses long sessions while preserving critical state. Agent-Skills-for-Context-Engineering
advanced-evaluation Covers LLM-as-a-judge and bias-aware automated evaluation. Agent-Skills-for-Context-Engineering

3. Writing and Scholarly Communication

Skill What It Does Link
doc Codex-oriented DOCX workflow with rendering checks. openai/skills
notion-research-documentation Useful for research briefs and structured evidence summaries. openai/skills
pdf Reads, creates, and reviews PDFs when layout and rendering matter. openai/skills
slides Creates and edits .pptx slide decks with editable output and layout validation. openai/skills
huggingface-paper-publisher Publishes papers on Hugging Face Hub, links them to models or datasets, and manages paper metadata. huggingface/skills
ml-paper-writing Writes publication-ready ML/AI/Systems papers. AI-Research-SKILLs

4. Literature Reading and Evidence Synthesis

Skill What It Does Link
notion-research-documentation Turns multi-source findings into cited literature notes. openai/skills
pdf Useful for paper packets, annotated drafts, and layout-sensitive reading workflows. openai/skills
transcribe Transcribes interviews, meetings, or recorded talks with optional speaker diarization. openai/skills
huggingface-papers Looks up Hugging Face paper pages and structured paper metadata for summaries or analysis. huggingface/skills
llamaindex Builds document-ingestion and retrieval pipelines for research corpora. AI-Research-SKILLs
faiss Provides high-performance dense retrieval for paper collections. AI-Research-SKILLs
sentence-transformers Generates embeddings for literature search, clustering, and retrieval. AI-Research-SKILLs

5. Visualization and Presentation

Skill What It Does Link
gradio Builds Gradio demos and interactive research interfaces in Python. huggingface/skills
huggingface-trackio Tracks training metrics, alerts, and dashboards with Hugging Face Trackio. huggingface/skills
slides Builds editable slide decks for talks, posters, and result reviews. openai/skills
langsmith Adds tracing, evaluation, and monitoring to LLM research workflows. AI-Research-SKILLs
phoenix Open-source observability for tracing, evaluation, and experiment analysis. AI-Research-SKILLs
tensorboard Visualizes scalars, embeddings, profiles, and training diagnostics. AI-Research-SKILLs
stable-diffusion Generates figures, concept art, and presentation assets for multimodal research. AI-Research-SKILLs

6. Data and Experimentation

Research workflows now depend on reproducible data handling, evaluation, and experiment tracking, so this category keeps those skills together.

Skill What It Does Link
jupyter-notebook Creates clean, reproducible Jupyter notebooks for experiments and tutorials. openai/skills
spreadsheet Creates, edits, and analyzes spreadsheets with formula-aware workflows and visual checks. openai/skills
huggingface-datasets Explores Hugging Face datasets through the Dataset Viewer API, including splits, search, filters, and parquet export. huggingface/skills
huggingface-community-evals Runs local evaluations for Hugging Face Hub models with inspect-ai or lighteval, with sensible backend selection. huggingface/skills
huggingface-llm-trainer Trains or fine-tunes language models with TRL on Hugging Face Jobs, including SFT, DPO, GRPO, and reward models. huggingface/skills
huggingface-vision-trainer Trains or fine-tunes vision models for detection, classification, and segmentation on Hugging Face Jobs. huggingface/skills
huggingface-jobs Runs data processing, inference, experiments, or training jobs on Hugging Face infrastructure. huggingface/skills
peft Covers parameter-efficient fine-tuning with LoRA, QLoRA, DoRA, and related adapter methods. AI-Research-SKILLs
weights-and-biases Tracks experiments, sweeps, artifacts, and model registries. AI-Research-SKILLs
mlflow Handles experiment tracking, model registry, deployment, and autologging workflows. AI-Research-SKILLs
lm-evaluation-harness Runs standardized LLM benchmarks such as MMLU, HumanEval, GSM8K, and TruthfulQA. AI-Research-SKILLs
bigcode-evaluation-harness Benchmarks code models with HumanEval, MBPP, MultiPL-E, and pass@k workflows. AI-Research-SKILLs
vllm Serves LLMs with high-throughput inference and OpenAI-compatible endpoints. AI-Research-SKILLs

Installation and Usage

This repository is a curated list, not a unified marketplace. In most cases, you install a skill from its upstream repository and place it in a Codex skill directory.

Install a skill in Codex

Current Codex docs describe these standard skill locations:

  • repository scope: .agents/skills/<skill-name>/
  • user scope: ~/.agents/skills/<skill-name>/

For official OpenAI skills, the simplest path is usually $skill-installer.

Example 1: install an official curated skill from openai/skills

$skill-installer pdf

Example 2: install a third-party skill manually

mkdir -p ~/.agents/skills
cd /tmp
git clone --depth 1 https://github.com/huggingface/skills.git
cp -R skills/skills/huggingface-papers ~/.agents/skills/

Example 3: install a research skill from AI-Research-SKILLs

mkdir -p ~/.agents/skills
cd /tmp
git clone --depth 1 https://github.com/Orchestra-Research/AI-Research-SKILLs.git
cp -R AI-Research-SKILLs/03-fine-tuning/peft ~/.agents/skills/

Some older guides and repos still mention .codex/skills, but the current OpenAI documentation uses .agents/skills as the standard location.

Use a skill in Codex

Once the folder is available in a valid Codex skill location, you can invoke it naturally in your prompt.

Examples:

  • Use the ml-paper-writing skill to turn this repo into a NeurIPS-style draft.
  • Use dspy to prototype an optimizer-backed prompt pipeline for this ablation.
  • Use huggingface-community-evals to smoke-test this checkpoint on MMLU and GSM8K.
  • Use pdf to review these camera-ready pages for layout issues.
  • Use gradio to build a demo for this paper artifact.

Recommended usage pattern

  1. Pick one skill for one clear bottleneck.
  2. Start with a narrow task instead of a full workflow.
  3. Read the upstream SKILL.md before relying on the result.
  4. For academic work, manually check citations, claims, equations, data handling, and benchmark settings.
  5. If a skill touches remote services or external datasets, verify authentication, quotas, privacy, and licensing before running it at scale.

License

The content of this repository is released under the MIT License.

Third-party skills linked from this list keep their own licenses. Always check the original repository before installing or redistributing anything.

If you notice a dead link, a naming change, or a clearly better entry for the list, a short issue or PR is enough.


References

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A curated list of research-oriented skills usable in OpenAI Codex, covering writing, literature review, evaluation, and research workflows.

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