1 add dkl surrogates

.env

@@ -1,3 +1,3 @@
 MODS_MOCK_AGENT_VERSION=0.7.0
-SIM_CMCL_MODS_WRAPPER_VERSION=0.10.0
+SIM_CMCL_MODS_WRAPPER_VERSION=0.11.0
 MODS_AGENT_BASE_URL=https://kg.cmclinnovations.com/mods-agent

examples/dkl.py

@@ -0,0 +1,82 @@
+import logging
+from osp.core.namespaces import mods, cuba
+from osp.core.utils import pretty_print
+import osp.core.utils.simple_search as search
+import osp.wrappers.sim_cmcl_mods_wrapper.mods_session as ms
+from dotenv import load_dotenv
+
+logger = logging.getLogger(__name__)
+logger.setLevel(logging.DEBUG)
+logger.addHandler(logging.StreamHandler())
+logger.handlers[0].setFormatter(
+    logging.Formatter("%(levelname)s %(asctime)s [%(name)s]: %(message)s")
+)
+
+
+def HDMR_example():
+    logger.info("################  Start: MoDS HDMR Example ################")
+    logger.info("Setting up the simulation inputs")
+
+    dkl_simulation = mods.DeepKernelLearningSimulation()
+    dkl_algorithm = mods.Algorithm(
+        name="algorithm1", type="GenSurrogateAlg", saveSurrogate=True)
+    dkl_algorithm.add(
+        mods.Variable(name="var1", type="input"),
+        mods.Variable(name="var2", type="input"),
+        mods.Variable(name="var3", type="input"),
+        mods.Variable(name="var4", type="output"),
+        mods.Variable(name="var5", type="output"),
+        mods.Variable(name="var6", type="output"),
+    )
+
+    dkl_simulation.add(dkl_algorithm)
+
+    example_data = [
+        ["var1", "var2", "var3", "var4", "var5", "var6"],
+        [0.1, 0.4, 0.5, 0.1, 1.2, 2.5],
+        [0.3, 0.9, 0.1, 0.9, 2.0, 3.0],
+        [0.6, 0.0, 0.2, 0.1, 1.0, 1.2],
+        [0.1, 0.1, 0.3, 0.7, 1.6, 2.1],
+        [0.2, 0.8, 0.5, 0.1, 1.7, 4.0],
+    ]
+
+    example_data_header = example_data[0]
+    example_data_values = example_data[1:]
+
+    input_data = mods.InputData()
+
+    for row in example_data_values:
+        data_point = mods.DataPoint()
+        for header, value in zip(example_data_header, row):
+            data_point.add(
+                mods.DataPointItem(name=header, value=value),
+                rel=mods.hasPart,
+            )
+        input_data.add(data_point, rel=mods.hasPart)
+
+    dkl_simulation.add(input_data)
+
+    logger.info("Invoking the wrapper session")
+    # Construct a wrapper and run a new session
+    with ms.MoDS_Session() as session:
+        load_dotenv()
+        wrapper = cuba.wrapper(session=session)
+        wrapper.add(dkl_simulation, rel=cuba.relationship)
+        wrapper.session.run()
+
+        job_id = search.find_cuds_objects_by_oclass(
+            mods.JobID, wrapper, rel=None
+        )
+
+    logger.info("Printing the simulation results.")
+
+    if job_id:
+        pretty_print(job_id[0])
+
+    logger.info("################  End: MoDS HDMR Example ################")
+
+    return job_id
+
+
+if __name__ == "__main__":
+    HDMR_example()