Updates for I19 serial #343
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noemifrisina
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May 20, 2025
* Extend MRC to Nexus converter to work with TVIPS Extend ED_mrc_to_nexus command to work with TVIPS cameras (besides eBIC Ceta-D detector). The command now has an option --detector that could be set either to cetad or tvips. * Fix ruff error * Fix another ruff error * Add tests for MRC to Nexus converter * Fix failing MRC converter tests * Fix MRC to Nexus converter command line arguments * Bump h5py from 3.11.0 to 3.13.0 (#330) Bumps [h5py](https://github.com/h5py/h5py) from 3.11.0 to 3.13.0. - [Release notes](https://github.com/h5py/h5py/releases) - [Changelog](https://github.com/h5py/h5py/blob/master/docs/release_guide.rst) - [Commits](h5py/h5py@3.11.0...3.13.0) --- updated-dependencies: - dependency-name: h5py dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> Co-authored-by: Noemi Frisina <54588199+noemifrisina@users.noreply.github.com> * Bump pydantic from 2.10.3 to 2.11.4 (#339) Bumps [pydantic](https://github.com/pydantic/pydantic) from 2.10.3 to 2.11.4. - [Release notes](https://github.com/pydantic/pydantic/releases) - [Changelog](https://github.com/pydantic/pydantic/blob/main/HISTORY.md) - [Commits](pydantic/pydantic@v2.10.3...v2.11.4) --- updated-dependencies: - dependency-name: pydantic dependency-version: 2.11.4 dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump numpy from 2.2.2 to 2.2.6 (#342) Bumps [numpy](https://github.com/numpy/numpy) from 2.2.2 to 2.2.6. - [Release notes](https://github.com/numpy/numpy/releases) - [Changelog](https://github.com/numpy/numpy/blob/main/doc/RELEASE_WALKTHROUGH.rst) - [Commits](numpy/numpy@v2.2.2...v2.2.6) --- updated-dependencies: - dependency-name: numpy dependency-version: 2.2.6 dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Updates for I19 serial (#343) * Update pydantic things * A start and some notes * Replace old namedtuples * Start rethinking parameter model * Add utility function to be used by nexgen server for serial * Update changelog * Fix test * Add a couple of dumb tests * Tidy up where possible * For now comment out before refactoring * Pass timestamps as datetime * Replace deprecated function * Fix iso timestamp bug and add test * Improve validation * Small test detail * Small improvements on general writer * Tidy ups * Update changelog * Start adding to CLI to make it nicer * Update command line for i19 * Update changelog * Add docstring * Fix typo * Reorganize the MRC to Nexus converter * Fix failing tests for MRC to Nexus converter --------- Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> Co-authored-by: Noemi Frisina <54588199+noemifrisina@users.noreply.github.com>
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