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CV Zebrafish — a modular software tool to track and analyze zebrafish movements from high-speed imaging. It integrates with DeepLabCut outputs to compute metrics like fin angles, movement timing, speed, and behavior classification

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CV_Zebrafish

Conda

use conda to initiate the dlc env:

conda env create -f environment.yml

Then activate the env using:

conda activate dlc

whenever you want to run the app, and deactivate the environment with conda deactivate whenever your finished.

Running the app

Cd into frontend and run python app.py

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CV Zebrafish — a modular software tool to track and analyze zebrafish movements from high-speed imaging. It integrates with DeepLabCut outputs to compute metrics like fin angles, movement timing, speed, and behavior classification

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  • Python 100.0%