HNSCC_Heterogeneity

Utilizing methylation arrays to explore tumour heterogeneity in Head and Neck Cancer

List of Rmd files with description:

1. CNV_Analysis.RDM: The file contains code to generate the CNV plots
2. HNSCC_NoHPV.RMD: The file contains code for differential methylation analysis between Non-HPV patient samples
3. HNSCC_allsamples.RMD: The file contains code for differential methylation analysis between all samples
4. HPV_NHPV DMR.RMD: The file contains code for differential methylation analysis based on HPV status