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Releases: BrentLab/fishnet

FISHNET v1.0.3

29 Sep 23:24

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FISHNET release v1.0.3

Minor updates:

  • Update default number of permutations to 200.
  • Update docs to reflect.
  • Add extra warnings and notes for running FISHNET on non-SLURM environments.

Full Changelog: v1.0.2...v1.0.3

FISHNET v1.0.2

25 Sep 04:02

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What's Changed

MAJOR:

  • Full restructuring of FISHNET pipeline to handle multiple traits.
  • This complete changes the way FISHNET handles input parameters and formats the output files

DETAILS:

  • added random seed to scripts/phase1/generate_uniform_pvals.py to fix … by @wsjung in #16
  • hotfix file path concat bug by @wsjung in #18
  • Dev by @wsjung in #19
  • FISHNET update v1.0.2 by @wsjung in #22

Full Changelog: v1.0.0...v1.0.2

fishnet v1.0.0

29 Jan 15:38
f709309

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fishnet release v1.0.0 for FISHNET paper

Works out of the box with Docker and HPC SLURM container environments.
Requires installation of (Docker/Singularity) and Nextflow.