Benchmark for DNA sequence-based model

Genomic Benchmark is a Python package for benchmarking DNA sequence-based models. The package provides dataset download and processing for various genomic tasks, including enhancer prediction and eQTL prediction.

Installation

pip install git+https://github.com/regulatory-genomics/Genomic_Benchmark.git

Documentation

• Data Download Guide: docs/data/download.md

Supported Task Types

Currently supports the following task types:

• Enhancer Prediction
• eQTL Prediction