WSI-PLP: Whole Slide Image Analysis for Patient-level Predictions

The WSI-PLP repository provides tools for analyzing Whole Slide Images (WSI) with a focus on making predictions at the patient level. It's built for handling large slide images in pathology.

Installation

Start using WSI-PLP by selecting a project and following the setup instructions:

POPPSlide

1. Go to the POPPSlide folder.
2. See the README there for installation details.

MaskHIT

1. Visit the MaskHIT folder.
2. The README explains setup and configurations.

Quick Setup for MaskHIT

For a faster MaskHIT setup:

• Run requirement.sh to install needed packages

• Install MaskHIT with setup_maskhit.py