Issues · ArtPoon/kamphir · GitHub

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Use sequential Monte Carlo instead of MCMC

#52

· ArtPoon opened

on Nov 24, 2015

Reimplement tree shape kernel as C shared library

#51

· ArtPoon opened

on Oct 13, 2015

Subtree kernel may not be positive definite

#50

· rmcclosk opened

on Sep 29, 2015

delimiter + tipdate doesn't work as expected

#49

· rmcclosk opened

on Sep 14, 2015

Rcolgem non-fatal error

#48

· rmcclosk opened

on Jul 29, 2015

Run hangs on OS-X

#43

· ArtPoon opened

on Jul 15, 2015

Stop if a non-ultrametric tree is passed without delimiter+position

#41

· rmcclosk opened

on Jul 3, 2015

Kamphir won't run on cluster

#39

· rmcclosk opened

on Jun 1, 2015

Implement adaptive MCMC for automatically tuning proposal variances

#37

· ArtPoon opened

on May 18, 2015

Possible rcolgem off-by-one error

#35

· rmcclosk opened

on May 13, 2015

Don't create an R cluster when ncores = 1

#34

· rmcclosk opened

on May 12, 2015

using mclapply within rcolgem locking up Kamphir

#29

· ArtPoon opened

on May 1, 2015