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Merged
hoganwr merged 3 commits into from
Dec 24, 2024
Merged

Update omrse import #257

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c1abf21
updated title annotation, added dcterms:contributer annotation, and r…
hoganwr Dec 24, 2024
e949c71
updated OMRSE import to ODK. Fixes #250
hoganwr Dec 24, 2024
1022f16
release v2024-12-24
hoganwr Dec 24, 2024
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24 changes: 14 additions & 10 deletions apollo_sv-base.json
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Original file line number Diff line number Diff line change
Expand Up @@ -26,18 +26,21 @@
}, {
"pred" : "http://purl.org/dc/elements/1.1/creator",
"val" : "Mathias Brochhausen"
}, {
"pred" : "http://purl.org/dc/elements/1.1/title",
"val" : "Apollo Structured Vocabulary (Apollo-SV)"
}, {
"pred" : "http://purl.org/dc/elements/1.1/type",
"val" : "http://purl.obolibrary.org/obo/IAO_8000001"
}, {
"pred" : "http://purl.org/dc/terms/contributor",
"val" : "https://orcid.org/0000-0002-9881-1017"
}, {
"pred" : "http://purl.org/dc/terms/description",
"val" : "An OWL2 ontology of phenomena in infectious disease epidemiology and population biology for use in epidemic simulation."
}, {
"pred" : "http://purl.org/dc/terms/license",
"val" : "https://creativecommons.org/licenses/by/4.0/"
}, {
"pred" : "http://purl.org/dc/terms/title",
"val" : "Apollo Structured Vocabulary (Apollo-SV)"
}, {
"pred" : "http://www.referent-tracking.com/RTS_00000001",
"val" : "C87985BA-6A8A-483A-A6B6-63975101F672"
Expand All @@ -49,12 +52,9 @@
"val" : "When citing Apollo-SV, use the permanent URL of the ontology: http://purl.obolibrary.org/obo/apollo_sv.owl. When referencing a specific component of the Apollo-SV such as a class, object property, annotation property, or individual, use the component's Uniform Resource Identifier (URI)."
}, {
"pred" : "http://www.w3.org/2002/07/owl#versionInfo",
"val" : "2023-01-10"
}, {
"pred" : "http://www.w3.org/2002/07/owl#versionInfo",
"val" : "2024-08-15"
"val" : "2024-12-24"
} ],
"version" : "http://purl.obolibrary.org/obo/apollo_sv/releases/2024-08-15/apollo_sv-base.json"
"version" : "http://purl.obolibrary.org/obo/apollo_sv/releases/2024-12-24/apollo_sv-base.json"
},
"nodes" : [ {
"id" : "http://purl.obolibrary.org/obo/APOLLO_SV_00000000",
Expand Down Expand Up @@ -12310,11 +12310,11 @@
"type" : "PROPERTY",
"propertyType" : "ANNOTATION"
}, {
"id" : "http://purl.org/dc/elements/1.1/title",
"id" : "http://purl.org/dc/elements/1.1/type",
"type" : "PROPERTY",
"propertyType" : "ANNOTATION"
}, {
"id" : "http://purl.org/dc/elements/1.1/type",
"id" : "http://purl.org/dc/terms/contributor",
"type" : "PROPERTY",
"propertyType" : "ANNOTATION"
}, {
Expand All @@ -12325,6 +12325,10 @@
"id" : "http://purl.org/dc/terms/license",
"type" : "PROPERTY",
"propertyType" : "ANNOTATION"
}, {
"id" : "http://purl.org/dc/terms/title",
"type" : "PROPERTY",
"propertyType" : "ANNOTATION"
}, {
"id" : "http://www.referent-tracking.com/RTS_00000001",
"type" : "PROPERTY",
Expand Down
8 changes: 4 additions & 4 deletions apollo_sv-base.obo
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Original file line number Diff line number Diff line change
@@ -1,5 +1,5 @@
format-version: 1.2
data-version: apollo_sv/releases/2024-08-15/apollo_sv-base.owl
data-version: apollo_sv/releases/2024-12-24/apollo_sv-base.owl
idspace: ace_lexicon http://attempto.ifi.uzh.ch/ace_lexicon#
idspace: dc http://purl.org/dc/elements/1.1/
idspace: doap http://usefulinc.com/ns/doap#
Expand All @@ -20,12 +20,12 @@ property_value: dc:contributor "Mike Wagner" xsd:string
property_value: dc:contributor "Shawn T. Brown" xsd:string
property_value: dc:contributor "William R. Hogan" xsd:string
property_value: dc:creator "Mathias Brochhausen" xsd:string
property_value: dc:title "Apollo Structured Vocabulary (Apollo-SV)" xsd:string
property_value: dc:type IAO:8000001
property_value: owl:versionInfo "2023-01-10" xsd:string
property_value: owl:versionInfo "2024-08-15" xsd:string
property_value: owl:versionInfo "2024-12-24" xsd:string
property_value: terms:contributor "https://orcid.org/0000-0002-9881-1017" xsd:anyURI
property_value: terms:description "An OWL2 ontology of phenomena in infectious disease epidemiology and population biology for use in epidemic simulation." xsd:string
property_value: terms:license "https://creativecommons.org/licenses/by/4.0/" xsd:string
property_value: terms:title "Apollo Structured Vocabulary (Apollo-SV)" xsd:string
property_value: www:RTS_00000001 "C87985BA-6A8A-483A-A6B6-63975101F672" xsd:string
property_value: www:RTS_00000002 "082D5D78-D916-457E-B4FD-365F86F45B30" xsd:string

Expand Down
22 changes: 14 additions & 8 deletions apollo_sv-base.owl
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Original file line number Diff line number Diff line change
Expand Up @@ -25,7 +25,7 @@
xmlns:ncbitaxon="http://purl.obolibrary.org/obo/ncbitaxon#"
xmlns:ace_lexicon="http://attempto.ifi.uzh.ch/ace_lexicon#">
<owl:Ontology rdf:about="http://purl.obolibrary.org/obo/apollo_sv/apollo_sv-base.owl">
<owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/apollo_sv/releases/2024-08-15/apollo_sv-base.owl"/>
<owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/apollo_sv/releases/2024-12-24/apollo_sv-base.owl"/>
<dc:contributor>Amanda Hicks</dc:contributor>
<dc:contributor>John Levander</dc:contributor>
<dc:contributor>Josh Hanna</dc:contributor>
Expand All @@ -34,15 +34,15 @@
<dc:contributor>Shawn T. Brown</dc:contributor>
<dc:contributor>William R. Hogan</dc:contributor>
<dc:creator>Mathias Brochhausen</dc:creator>
<dc:title xml:lang="en">Apollo Structured Vocabulary (Apollo-SV)</dc:title>
<dc:type rdf:resource="http://purl.obolibrary.org/obo/IAO_8000001"/>
<terms:contributor rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">https://orcid.org/0000-0002-9881-1017</terms:contributor>
<terms:description xml:lang="en">An OWL2 ontology of phenomena in infectious disease epidemiology and population biology for use in epidemic simulation.</terms:description>
<terms:license>https://creativecommons.org/licenses/by/4.0/</terms:license>
<terms:title xml:lang="en">Apollo Structured Vocabulary (Apollo-SV)</terms:title>
<www:RTS_00000001>C87985BA-6A8A-483A-A6B6-63975101F672</www:RTS_00000001>
<www:RTS_00000002>082D5D78-D916-457E-B4FD-365F86F45B30</www:RTS_00000002>
<rdfs:comment xml:lang="en">When citing Apollo-SV, use the permanent URL of the ontology: http://purl.obolibrary.org/obo/apollo_sv.owl. When referencing a specific component of the Apollo-SV such as a class, object property, annotation property, or individual, use the component&apos;s Uniform Resource Identifier (URI).</rdfs:comment>
<owl:versionInfo>2023-01-10</owl:versionInfo>
<owl:versionInfo>2024-08-15</owl:versionInfo>
<owl:versionInfo>2024-12-24</owl:versionInfo>
</owl:Ontology>


Expand Down Expand Up @@ -234,15 +234,15 @@ For the 1982-10-17 date, we suggest the dc:created annotation.</rdfs:comment>



<!-- http://purl.org/dc/elements/1.1/title -->
<!-- http://purl.org/dc/elements/1.1/type -->

<owl:AnnotationProperty rdf:about="http://purl.org/dc/elements/1.1/title"/>
<owl:AnnotationProperty rdf:about="http://purl.org/dc/elements/1.1/type"/>



<!-- http://purl.org/dc/elements/1.1/type -->
<!-- http://purl.org/dc/terms/contributor -->

<owl:AnnotationProperty rdf:about="http://purl.org/dc/elements/1.1/type"/>
<owl:AnnotationProperty rdf:about="http://purl.org/dc/terms/contributor"/>



Expand All @@ -258,6 +258,12 @@ For the 1982-10-17 date, we suggest the dc:created annotation.</rdfs:comment>



<!-- http://purl.org/dc/terms/title -->

<owl:AnnotationProperty rdf:about="http://purl.org/dc/terms/title"/>



<!-- http://www.referent-tracking.com/RTS_00000001 -->

<owl:AnnotationProperty rdf:about="http://www.referent-tracking.com/RTS_00000001"/>
Expand Down
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