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Create Dockerfile for this project. #12

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170b418
Create Dockerfile with steps in README.md
kur4mot0 May 12, 2019
208ab18
Correct dockerfile
kur4mot0 May 12, 2019
5ddd34d
Update README with Docker commands.
kur4mot0 May 12, 2019
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11 changes: 11 additions & 0 deletions Dockerfile
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FROM centos:latest
WORKDIR /opt
COPY . .
RUN yum install -y https://centos7.iuscommunity.org/ius-release.rpm
RUN yum update -y
RUN yum install -y python36u python36u-libs python36u-devel python36u-pip python36u-setuptools gcc bzip2
RUN pip3.6 install --upgrade pip
RUN curl -O https://repo.anaconda.com/archive/Anaconda3-2019.03-Linux-x86_64.sh | bash
RUN pip3.6 install networkx fa2 python-louvain
EXPOSE 8000
ENTRYPOINT ["./start_server.sh"]
9 changes: 9 additions & 0 deletions README.md
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Expand Up @@ -54,3 +54,12 @@ Place the main directory somehwere inside folder that contains this README and t
3. Open web browser (preferably Chrome; best to use incognito mode to ensure no cached data is used).
4. View data set by navigating to corresponding URL: http://localhost:8000/springViewer_1_6_dev.html?path_to/main/subplot. In the example above, if you wanted to view a SPRING plot called `HSC` in the main directory `human_bone_marrow`, then you would navigate to http://localhost:8000/springViewer_1_6_dev.html?datasets/human_bone_marrow/HSC

### Build image with Dockerfile

1. Opem Terminal (Mac) or PowerShell (Windows) or Terminal (Linux) and change directories (`cd`) to the directory containing this README file (`SPRING_dev/`).
2. Execute:
`docker build -t <changethenamewithyouwant> .`
3. After build execute:
`docker run -d -p <localport>:8000 <changethenamewithyouwant>`
4. Open browser with http://localhost:<localport>.
5. Enjoy.