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AlignBio2025

Current approach: training a hybrid CNN>GNN model for predicting properties of PETase variants.

Quickstart (in dev) 1 - create venv & install requirements:

python3 -m venv .venv
source .venv/bin/activate
pip install -r requirements.txt

2 - EDA & preprocess data + conduct demo training?

3 - training with GPU

python3 src/train.py --epochs 100 --batch_size 32 --device cuda

4 - evaluate

python3 src/evaluate.py --model 

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