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stacking-1004.py
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346 lines (266 loc) · 14 KB
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import os
import time
import warnings
import traceback
import logging
import numpy as np
import pandas as pd
from sklearn.base import BaseEstimator, clone
from sklearn.ensemble import RandomForestRegressor
from sklearn.linear_model import LinearRegression
from sklearn.metrics import mean_squared_error, mean_absolute_error
from sklearn.model_selection import TimeSeriesSplit
from sklearn.neural_network import MLPRegressor
from sklearn.preprocessing import MinMaxScaler
from xgboost import XGBRegressor
from typing import Dict
warnings.filterwarnings('ignore')
def calculate_rmse(y_true, y_pred):
return np.sqrt(mean_squared_error(y_true, y_pred))
def calculate_nse(y_true, y_pred):
mean_y_true = np.mean(y_true)
numerator = np.sum((y_true - y_pred) ** 2)
denominator = np.sum((y_true - mean_y_true) ** 2)
return 1 - (numerator / denominator) if denominator != 0 else float('inf')
def calculate_r2(y_true, y_pred):
mean_y_true = np.mean(y_true)
mean_y_pred = np.mean(y_pred)
numerator = np.sum((y_true - mean_y_true) * (y_pred - mean_y_pred)) ** 2
denominator = np.sum((y_true - mean_y_true) ** 2) * np.sum((y_pred - mean_y_pred) ** 2)
return numerator / denominator if denominator != 0 else float('inf')
def calculate_bias(y_true, y_pred):
return np.mean(y_pred - y_true)
def blocked_bootstrap_ci(y_true, y_pred, metric_func, n_bootstrap=1000,
alpha=0.05, block_size=60, seed=42):
rng = np.random.default_rng(seed)
stats = []
n = len(y_true)
y_true, y_pred = np.asarray(y_true), np.asarray(y_pred)
if n < block_size:
return np.nan, np.nan, np.nan
num_blocks = n - block_size + 1
for _ in range(n_bootstrap):
num_samples = (n + block_size - 1) // block_size
start_indices = rng.choice(num_blocks, size=num_samples, replace=True)
idx = [i for start in start_indices for i in range(start, start + block_size)]
idx = idx[:n]
if len(idx) != n:
continue
stat_val = metric_func(y_true[idx], y_pred[idx])
if np.isfinite(stat_val):
stats.append(stat_val)
if len(stats) < 100:
return np.nan, np.nan, np.nan
lower = np.percentile(stats, 100 * alpha / 2)
upper = np.percentile(stats, 100 * (1 - alpha / 2))
width = upper - lower
return lower, upper, width
def assign_season(month):
if month in [12, 1, 2]: return "winter"
if month in [3, 4, 5]: return "spring"
if month in [6, 7, 8]: return "summer"
return "autumn"
class TimeSeriesStacking:
def __init__(self, base_models: Dict[str, BaseEstimator], meta_model: BaseEstimator, cv_splits=5):
self.base_models = base_models
self.meta_model = meta_model
self.cv_splits = cv_splits
self.fitted_base_models = {}
self.fitted_meta_model = None
def fit(self, X, y):
tscv = TimeSeriesSplit(n_splits=self.cv_splits)
meta_features_list, meta_target_list = [], []
for train_idx, val_idx in tscv.split(X):
X_train, X_val = X[train_idx], X[val_idx]
y_train, y_val = y[train_idx], y[val_idx]
fold_meta_features = []
for name, model in self.base_models.items():
model_clone = clone(model)
model_clone.fit(X_train, y_train)
y_pred_val = model_clone.predict(X_val)
fold_meta_features.append(y_pred_val)
meta_features_list.append(np.column_stack(fold_meta_features))
meta_target_list.append(y_val)
meta_features = np.vstack(meta_features_list)
meta_target = np.concatenate(meta_target_list)
self.fitted_meta_model = clone(self.meta_model).fit(meta_features, meta_target)
for name, model in self.base_models.items():
self.fitted_base_models[name] = clone(model).fit(X, y)
return self
def predict(self, X):
base_preds = [model.predict(X) for model in self.fitted_base_models.values()]
meta_features = np.column_stack(base_preds)
return self.fitted_meta_model.predict(meta_features)
def evaluate_models_for_site(file_path, site_hyperparams_df, features, input_set_name, seed):
file_name = os.path.splitext(os.path.basename(file_path))[0]
logging.info(f" -> Processing site: {file_name:15s} | Input: {input_set_name}")
data = pd.read_excel(file_path)
data['date'] = pd.to_datetime(data['date'])
data['year'] = data['date'].dt.year
data['month'] = data['date'].dt.month
data['season'] = data['month'].apply(assign_season)
years = sorted(data['year'].unique())
split_idx = int(len(years) * 0.8)
train_years, test_years = years[:split_idx], years[split_idx:]
train_data = data[data['year'].isin(train_years)]
test_data = data[data['year'].isin(test_years)]
X_train_df, y_train = train_data[features], train_data['ET'].values
X_test_df, y_test = test_data[features], test_data['ET'].values
scaler = MinMaxScaler()
X_train = scaler.fit_transform(X_train_df)
X_test = scaler.transform(X_test_df)
try:
rf_hyperparams = site_hyperparams_df[site_hyperparams_df['模型'] == 'RF'].iloc[0]
xgb_hyperparams = site_hyperparams_df[site_hyperparams_df['模型'] == 'XGB'].iloc[0]
mlp_hyperparams = site_hyperparams_df[site_hyperparams_df['模型'] == 'MLP'].iloc[0]
except IndexError:
logging.error(f" [ERROR] Missing one or more model hyperparameters for site {file_name}. Skipping.")
return pd.DataFrame(), pd.DataFrame()
rf_params = {'n_estimators': int(rf_hyperparams['n_estimators']), 'max_depth': int(rf_hyperparams['max_depth']),
'min_samples_split': int(rf_hyperparams['min_samples_split']),
'min_samples_leaf': int(rf_hyperparams['min_samples_leaf']),
'random_state': seed}
xgb_params = {'n_estimators': int(xgb_hyperparams['n_estimators']), 'max_depth': int(xgb_hyperparams['max_depth']),
'learning_rate': xgb_hyperparams['learning_rate'], 'subsample': xgb_hyperparams['subsample'],
'colsample_bytree': xgb_hyperparams['colsample_bytree'],
'random_state': seed, 'seed': seed}
mlp_params = {'hidden_layer_sizes': eval(str(mlp_hyperparams['hidden_layer_sizes'])),
'learning_rate_init': mlp_hyperparams['learning_rate_init'],
'alpha': mlp_hyperparams['alpha'], 'random_state': seed, 'max_iter': 1000}
base_models = {'RF': RandomForestRegressor(**rf_params), 'XGB': XGBRegressor(**xgb_params),
'MLP': MLPRegressor(**mlp_params)}
predictions = {name: model.fit(X_train, y_train).predict(X_test) for name, model in base_models.items()}
ts_stacking = TimeSeriesStacking(base_models=base_models, meta_model=LinearRegression(), cv_splits=5)
ts_stacking.fit(X_train, y_train)
predictions['Stacking'] = ts_stacking.predict(X_test)
site_results = []
test_seasons = test_data['season'].values
for model_name, y_pred in predictions.items():
for season_name in ["Overall", "spring", "summer", "autumn", "winter"]:
mask = (np.ones_like(y_test, dtype=bool) if season_name == "Overall" else (test_seasons == season_name))
sample_size = np.sum(mask)
if sample_size < 30:
continue
y_true_s, y_pred_s = y_test[mask], y_pred[mask]
metrics = {
'RMSE': calculate_rmse(y_true_s, y_pred_s),
'R2': calculate_r2(y_true_s, y_pred_s),
'NSE': calculate_nse(y_true_s, y_pred_s),
'Bias': calculate_bias(y_true_s, y_pred_s),
'MAE': mean_absolute_error(y_true_s, y_pred_s)
}
ci_results = {}
ci_funcs = {'RMSE': calculate_rmse, 'R2': calculate_r2, 'NSE': calculate_nse, 'Bias': calculate_bias,
'MAE': mean_absolute_error}
for name, func in ci_funcs.items():
low, high, width = blocked_bootstrap_ci(y_true_s, y_pred_s, func, seed=seed)
ci_results[f'{name}_CI_low'] = low
ci_results[f'{name}_CI_high'] = high
ci_results[f'{name}_CI_width'] = width
site_results.append({
'Site': file_name, 'InputSet': input_set_name, 'Model': model_name, 'Season': season_name,
'Sample_Size': sample_size, **metrics, **ci_results
})
results_df = pd.DataFrame(site_results)
predictions_df = pd.DataFrame(
{'Date': test_data['date'], 'True_ET': y_test, **{f'{k}_Pred': v for k, v in predictions.items()}})
return results_df, predictions_df
if __name__ == "__main__":
start_time = time.time()
FOLDER_PATH = r'X:\X'
OUTPUT_FOLDER = r'X:\X'
SEED = 42
if not os.path.exists(OUTPUT_FOLDER):
os.makedirs(OUTPUT_FOLDER)
log_file_path = os.path.join(OUTPUT_FOLDER, 'evaluation_log.log')
logging.basicConfig(
level=logging.INFO,
format='%(asctime)s - %(levelname)s - %(message)s',
handlers=[
logging.FileHandler(log_file_path, mode='w', encoding='utf-8'),
logging.StreamHandler()
]
)
logging.info("=" * 80)
logging.info(" TIME-SERIES SAFE STACKING EVALUATION SYSTEM (Publication-Ready Version)")
logging.info("=" * 80 + "\n")
INPUT_SETS = {"X": ["X"], "X": ["X"],
"X": ["X"]}
HYPERPARAM_FILES = {"X": r'X:\XXXXXXX\XXXXX',
"X": r'X:\XXXXXXX\XXXXX',
"X": r'X:\XXXXXXX\XXXXX'}
logging.info("Validating hyperparameter files...")
for input_set, path in HYPERPARAM_FILES.items():
if os.path.exists(path):
logging.info(f" [OK] {input_set}: {path}")
else:
logging.warning(f" [NOT FOUND] {input_set}: {path}")
logging.info("")
all_results_list = []
files = [f for f in os.listdir(FOLDER_PATH) if f.endswith('.xlsx')]
logging.info(f"Found {len(files)} station files to process.\n")
for input_set_name, features in INPUT_SETS.items():
logging.info("=" * 80)
logging.info(f" Starting INPUT SET: {input_set_name} | Features: {', '.join(features)} | Seed: {SEED}")
logging.info("=" * 80)
current_hyperparam_file = HYPERPARAM_FILES[input_set_name]
if not os.path.exists(current_hyperparam_file):
logging.error(f"Hyperparameter file not found: {current_hyperparam_file}. Skipping {input_set_name}.\n")
continue
try:
hyperparams_df = pd.read_excel(current_hyperparam_file)
logging.info(f"[OK] Successfully loaded {len(hyperparams_df)} hyperparameter configurations.\n")
except Exception as e:
logging.error(f"Failed to load hyperparameter file: {e}. Skipping {input_set_name}.\n")
continue
for file in files:
file_path = os.path.join(FOLDER_PATH, file)
file_name = os.path.splitext(file)[0]
if file_name not in hyperparams_df['X'].values:
logging.warning(f" [WARNING] No hyperparameters found for site {file_name}. Skipping.")
continue
hyperparams_for_site = hyperparams_df[hyperparams_df['文件名'] == file_name]
logging.info(f" > Verifying Hyperparameters for Site: {file_name}\n{hyperparams_for_site.to_string()}")
try:
results_df, predictions_df = evaluate_models_for_site(
file_path, hyperparams_for_site, features, input_set_name, SEED
)
if not results_df.empty:
all_results_list.append(results_df)
per_site_path = os.path.join(OUTPUT_FOLDER, f"site_{file_name}_{input_set_name}_results.csv")
results_df.to_csv(per_site_path, index=False)
logging.info(f" [OK] Saved per-site results to: {os.path.basename(per_site_path)}")
if not predictions_df.empty:
per_site_pred_path = os.path.join(OUTPUT_FOLDER,
f"site_{file_name}_{input_set_name}_predictions.csv")
predictions_df.to_csv(per_site_pred_path, index=False)
logging.info(f" [OK] Saved per-site predictions to: {os.path.basename(per_site_pred_path)}")
except Exception as e:
logging.error(f" [FATAL ERROR] processing {file_name}: {e}")
logging.error(traceback.format_exc())
continue
if not all_results_list:
logging.warning("\n[ERROR] No results were generated. Please check logs for errors.")
else:
logging.info("\n" + "=" * 80)
logging.info(" AGGREGATING AND SAVING FINAL RESULTS")
logging.info("=" * 80 + "\n")
try:
final_results_df = pd.concat(all_results_list, ignore_index=True)
agg_path = os.path.join(OUTPUT_FOLDER, 'aggregated_metrics.csv')
final_results_df.to_csv(agg_path, index=False)
logging.info(f"[OK] Successfully aggregated {len(final_results_df)} records.")
logging.info(f"[OK] Final aggregated metrics saved to: {agg_path}")
except Exception as e:
logging.error(f"\n[ERROR] Aggregation failed: {e}")
logging.error(traceback.format_exc())
end_time = time.time()
logging.info("\n" + "=" * 80)
logging.info(" EXECUTION SUMMARY")
logging.info("=" * 80)
logging.info(f" Total execution time: {(end_time - start_time) / 60:.2f} minutes.")
logging.info(f" Total sites processed: {len(files)}")
logging.info(f" Input sets evaluated: {', '.join(INPUT_SETS.keys())}")
logging.info(f" Output directory: {OUTPUT_FOLDER}")
logging.info(f" Detailed log saved to: {log_file_path}")
logging.info("=" * 80)