Skip to content

Output file format comments #4

@fanch1122

Description

@fanch1122

I noticed that most of the output files have no header. Can you give a format comment? I got this:

SM	Contig12261.0	517	Contig12261.0	AUGUSTUS	exon	434	1837	0.98	+	.	transcript_id "g12501";	distance:83	Contig12261.0	1289	Contig12261.0	AUGUSTUS	exon	434	1837	0.98	+	.	transcript_id "g12501";	distance:855
SM	OXYTRI_MIC_93187	11205	 	 	 	 	 	 	 	 	 	 	OXYTRI_MIC_93187	11327	 	 	 	 	 	 	 	 	 	 
SM	OXYTRI_MIC_89755	42639	 	 	 	 	 	 	 	 	 	 	OXYTRI_MIC_89755	43203	 	 	 	 	 	 	 	 	 	 
SM	OXYTRI_MIC_89755	43122	 	 	 	 	 	 	 	 	 	 	OXYTRI_MIC_89755	43208	 	 	 	 	 	 	 	 	 	 
SM	Contig12261.0v1	1246	Contig12261.0v1	AUGUSTUS	exon	425	1828	1	+	.	transcript_id "g18530";	distance:821	Contig12261.0v1	1312	Contig12261.0v1	AUGUSTUS	exon	425	1828	1	+	.	transcript_id "g18530";	distance:887

I don't know how to interpret this result, or what process to follow to continue.

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Type

    No type

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions