spectrum_fundamentals/pyproject.toml at development · wilhelm-lab/spectrum_fundamentals · GitHub

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[tool.poetry]
name = "spectrum_fundamentals"
version = "0.10.0"
description = "Fundamental functions, annotation pipeline and constants for oktoberfest"
authors = ["Wilhelmlab at Technical University of Munich"]
license = "MIT"
readme = "README.rst"
homepage = "https://github.com/wilhelm-lab/spectrum_fundamentals"
repository = "https://github.com/wilhelm-lab/spectrum_fundamentals"
documentation = "https://spectrum-fundamentals.readthedocs.io"
packages = [
    { include = "spectrum_fundamentals" },
]
include = [
    "spectrum_fundamentals/ions/ion_dict.csv",
]
classifiers = [
    "Programming Language :: Python :: 3.10",
    "Programming Language :: Python :: 3.11",
    "Programming Language :: Python :: 3.12",
    "Programming Language :: Python :: 3.13",
]


[tool.poetry.dependencies]
python = ">=3.10,<3.14.0"
click = ">=8.0.0"
rich = ">=10.3.0"
PyYAML = ">=5.4.1"
numpy = ">=1.24.1"
pandas = ">=1.3,<3.0"
scikit-learn = "^1.5"
joblib = "^1.0.1"
moepy = "^1.1.4"

[tool.poetry.group.dev.dependencies]
pytest = ">=6.2.4"
pytest-cov = "^7.0.0"
coverage = {extras = ["toml"], version = ">=5.3"}
mypy = ">=1.19"
ruff = ">=0.4"
pre-commit = ">=4.5.1"
pre-commit-hooks = ">=4.0.1"
types-requests = ">=2.25.2"
types-attrs = ">=19.1.0"
sphinx = ">=7.0"
sphinx-autobuild = ">=2021.3.14"
sphinx-autodoc-typehints = ">=3.0"
sphinx-click = "^6.2.0"
sphinx-rtd-theme = ">=2.0"

[tool.poetry.scripts]
spectrum_fundamentals = "spectrum_fundamentals.__main__:main"

[tool.ruff]
line-length = 120

[tool.ruff.lint]
# E/W: pycodestyle  F: pyflakes  I: isort  B: bugbear  UP: pyupgrade
# Extend with S (bandit), N (pep8-naming), D (docstrings) as the codebase matures.
select = ["E", "W", "F", "I", "B", "UP"]

[tool.ruff.format]
# Matches the previous black configuration.
quote-style = "double"
indent-style = "space"

[tool.coverage.paths]
source = ["spectrum_fundamentals", "*/site-packages"]

[tool.coverage.run]
branch = true
source = ["spectrum_fundamentals"]

[tool.coverage.report]
show_missing = true

[tool.mypy]
python_version = "3.13"
warn_return_any = false
warn_unused_configs = true
disallow_untyped_defs = false
ignore_missing_imports = true

[tool.pytest.ini_options]
testpaths = ["tests"]

[build-system]
requires = ["poetry-core>=1.0.0"]
build-backend = "poetry.core.masonry.api"