diff --git a/_posts/2025-10-22-tool-updates.md b/_posts/2025-10-22-tool-updates.md new file mode 100644 index 000000000..5a3ec7c63 --- /dev/null +++ b/_posts/2025-10-22-tool-updates.md @@ -0,0 +1,45 @@ +--- +site: freiburg +title: 'Galaxy Australia tool updates 2025-10-22' +tags: [tools] +supporters: + - galaxyaustralia + - melbinfo + - qcif +--- + + + + +### Tools installed + +| Section | Tool | +|---------|-----| +| **Proteomics** | constava [5975e7bd2cde](https://toolshed.g2.bx.psu.edu/view/iuc/constava/5975e7bd2cde)
rrmscorer [02b0e0f78d8a](https://toolshed.g2.bx.psu.edu/view/iuc/rrmscorer/02b0e0f78d8a)
b2btools_single_sequence [b694a77ca1e8](https://toolshed.g2.bx.psu.edu/view/iuc/b2btools_single_sequence/b694a77ca1e8) | + +### Tools updated + +| Section | Tool | +|---------|-----| +| **Annotation** | snpeff [3aae4f16ac9e](https://toolshed.g2.bx.psu.edu/view/iuc/snpeff/3aae4f16ac9e)
tb_profiler_collate [e9568d48ee11](https://toolshed.g2.bx.psu.edu/view/iuc/tb_profiler_collate/e9568d48ee11) | +| **Assembly** | busco [c5a90fa4b8dd](https://toolshed.g2.bx.psu.edu/view/iuc/busco/c5a90fa4b8dd) | +| **FASTA/FASTQ** | fastp [f875da9d433c](https://toolshed.g2.bx.psu.edu/view/iuc/fastp/f875da9d433c) | +| **Mapping** | bwa_mem2 [af91699b8d4c](https://toolshed.g2.bx.psu.edu/view/iuc/bwa_mem2/af91699b8d4c) | +| **Metagenomic Analysis** | mash [22384d3d25f4](https://toolshed.g2.bx.psu.edu/view/iuc/mash/22384d3d25f4)
mash_sketch [9de5319ad2db](https://toolshed.g2.bx.psu.edu/view/iuc/mash_sketch/9de5319ad2db) | +| **Proteomics** | fragpipe [da1531027506](https://toolshed.g2.bx.psu.edu/view/galaxyp/fragpipe/da1531027506) | +| **RNA-seq** | edger [fd9902d118e5](https://toolshed.g2.bx.psu.edu/view/iuc/edger/fd9902d118e5) |