Install R package scalop failed

[inoriln]

Hi, thank you for your wonderful work! I have learned a lot from this paper.
However, I have a small question. In ITH_hallmarks/MPs_distribution/MP_distribution.R, Line 23:
library(scalop) # see https://rdrr.io/github/jlaffy/scalop/man/sigScores.html
I have tried many ways, including:
remotes::install_github("jlaffy/scalop")
or downloaded .zip profile from github to install locally.
devtools::install_local("~/others/scalop-master/")
None did work, could you please tell me how to fix this problem? Thanks! Maybe just my Internet did not work.

[ConDem94]

Hi, thank you for your wonderful work! I have learned a lot from this paper.

However, I have a small question. In ITH_hallmarks/MPs_distribution/MP_distribution.R, Line 23:

library(scalop) # see https://rdrr.io/github/jlaffy/scalop/man/sigScores.html

I have tried many ways, including:

remotes::install_github("jlaffy/scalop")

or downloaded .zip profile from github to install locally.

devtools::install_local("~/others/scalop-master/")

None did work, could you please tell me how to fix this problem? Thanks! Maybe just my Internet did not work.

Hi, did you find a solution to this? I am also trying to run infercna for my analysis and I am having issues with installing scalop.

[dcy-Sundar]

I have tried many ways to fix this problem, but none did work as well. Did anyone find a solution?

[JeanRadig]

For R>=4 you can install is using the following command:

install.packages("remotes")
remotes::install_github("JeanRadig/scalop") 

Which is a reference to: https://github.com/JeanRadig/scalop. Let me know if issues are encountered!