-
Notifications
You must be signed in to change notification settings - Fork 2
Expand file tree
/
Copy pathDESCRIPTION
More file actions
42 lines (42 loc) · 1.83 KB
/
DESCRIPTION
File metadata and controls
42 lines (42 loc) · 1.83 KB
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
Package: PathwaySpace
Type: Package
Title: Spatial Projection of Network Signals along Geodesic Paths
Version: 1.2.0
Authors@R:
c(person("Sysbiolab Team", role = "aut"),
person("Victor", "Apolonio", role = "ctb"),
person("Vinicius", "Chagas", role = "ctb"),
person("Mauro", "Castro", role = c("cre"),
email = "mauro.a.castro@gmail.com",
comment = c(ORCID = "0000-0003-4942-8131"))
)
Depends: R(>= 4.5), methods, RGraphSpace(>= 1.1.4)
Imports: grDevices, stats, scales, RANN, igraph, ggplot2, ggrepel, grid, colorspace, patchwork, lifecycle
Suggests: knitr, rmarkdown, testthat, RedeR
Description: For a given graph containing vertices, edges, and a signal
associated with the vertices, the PathwaySpace package performs a convolution
operation, which involves a weighted combination of neighboring vertices and
their associated signals. The package uses a decay function to project these
signals, creating geodesic paths on a 2D-image space. PathwaySpace could have
various applications, such as visualizing network data in a graphical format
that highlights the relationships and signal strengths between vertices. It
can be particularly useful for understanding the influence of signals through
complex networks. By combining graph theory, signal processing, and
visualization, the PathwaySpace package provides a way of representing
graph data.
License: Artistic-2.0
VignetteBuilder: knitr
URL: https://sysbiolab.github.io/PathwaySpace/, https://github.com/sysbiolab/PathwaySpace
BugReports: https://github.com/sysbiolab/PathwaySpace/issues
Collate:
pspaceChecks.R
pspaceSupplements.R
pspaceMisc.R
pspaceWatershed.R
pspaceDecay.R
pspaceClasses.R
pspaceGenerics.R
pspaceMethods.R
pspacePlots.R
Encoding: UTF-8
RoxygenNote: 7.3.2