Is it necessary to analyse all eight haplotypes

[jiangzy26]

Hi,
I found the tutorial, if we use all eight haplotypes, "-I 0-4,0-5,0-6,0-7,1-4,1-5,1-6,1-7,2-4,2-5,2-6,2-7,3-4,3-5,3-6,3-7", it will take too much time and memory, I got 16 haplotypes from two populations, Could you tell whether it is necessary to use all haplotypes?

Thanks.

[stschiff]

Start with a few and then see whether you get different results if you run on more.