diff --git a/Strata/Languages/Python/Verify.lean b/Strata/Languages/Python/Verify.lean
new file mode 100644
index 000000000..453d00704
--- /dev/null
+++ b/Strata/Languages/Python/Verify.lean
@@ -0,0 +1,63 @@
+/-
+  Copyright Strata Contributors
+
+  SPDX-License-Identifier: Apache-2.0 OR MIT
+-/
+
+import Strata.DDM.Ion
+import Strata.Util.IO
+import Strata.Languages.Python.Python
+import Strata.Languages.Boogie.Verifier
+import StrataTest.Transform.ProcedureInlining
+
+namespace Strata.Languages.Python
+
+structure CommandFlags where
+  verbose : Bool := false
+  noinline : Bool := false
+
+def exitFailure {α} (message : String) : IO α := do
+  IO.eprintln (message  ++ "\n\nRun strata --help for additional help.")
+  IO.Process.exit 1
+
+def readPythonStrata (path : String) : IO Strata.Program := do
+  let bytes ← Strata.Util.readBinInputSource path
+  if ! bytes.startsWith Ion.binaryVersionMarker then
+    exitFailure s!"pyAnalyze expected Ion file"
+  match Strata.Program.fromIon Strata.Python.Python_map Strata.Python.Python.name bytes with
+  | .ok p => pure p
+  | .error msg => exitFailure msg
+
+def pyTranslate (path : String) : IO Unit := do
+  let pgm ← readPythonStrata path
+  let preludePgm := Strata.Python.Internal.Boogie.prelude
+  let bpgm := Strata.pythonToBoogie pgm
+  let newPgm : Boogie.Program := { decls := preludePgm.decls ++ bpgm.decls }
+  IO.print newPgm
+
+def pyAnalyze (path : String) (flags : CommandFlags) : IO Unit := do
+  let verbose := flags.verbose
+  let inline := !flags.noinline
+  let pgm ← readPythonStrata path
+  if verbose then
+    IO.print pgm
+  let preludePgm := Strata.Python.Internal.Boogie.prelude
+  let bpgm := Strata.pythonToBoogie pgm
+  let newPgm : Boogie.Program := { decls := preludePgm.decls ++ bpgm.decls }
+  if verbose then
+    IO.print newPgm
+  let newPgm := if inline then runInlineCall newPgm else newPgm
+  if verbose && inline then
+    IO.println "Inlined: "
+    IO.print newPgm
+  let vcResults ← EIO.toIO (fun f => IO.Error.userError (toString f))
+                      (Boogie.verify "z3" newPgm { Options.default with stopOnFirstError := false,
+                                                                        verbose,
+                                                                        removeIrrelevantAxioms := true }
+                                               (moreFns := Strata.Python.ReFactory))
+  let mut s := ""
+  for vcResult in vcResults do
+    s := s ++ s!"\n{vcResult.obligation.label}: {Std.format vcResult.result}\n"
+  IO.println s
+
+end Strata.Languages.Python
diff --git a/StrataMain.lean b/StrataMain.lean
index 54d994a3e..c900fb8f3 100644
--- a/StrataMain.lean
+++ b/StrataMain.lean
@@ -9,8 +9,7 @@ import Strata.DDM.Elab
 import Strata.DDM.Ion
 import Strata.Util.IO
 
-import Strata.Languages.Python.Python
-import StrataTest.Transform.ProcedureInlining
+import Strata.Languages.Python.Verify
 
 def exitFailure {α} (message : String) : IO α := do
   IO.eprintln (message  ++ "\n\nRun strata --help for additional help.")
@@ -113,6 +112,7 @@ structure Command where
   args : List String
   help : String
   callback : Strata.DialectFileMap → Vector String args.length → IO Unit
+  flagsCallback : Option (Strata.DialectFileMap → Vector String args.length → Strata.Languages.Python.CommandFlags → IO Unit) := none
 
 def checkCommand : Command where
   name := "check"
@@ -168,52 +168,21 @@ def diffCommand : Command where
     | _, _ =>
       exitFailure "Cannot compare dialect def with another dialect/program."
 
-def readPythonStrata (path : String) : IO Strata.Program := do
-  let bytes ← Strata.Util.readBinInputSource path
-  if ! bytes.startsWith Ion.binaryVersionMarker then
-    exitFailure s!"pyAnalyze expected Ion file"
-  match Strata.Program.fromIon Strata.Python.Python_map Strata.Python.Python.name bytes with
-  | .ok p => pure p
-  | .error msg => exitFailure msg
-
 def pyTranslateCommand : Command where
   name := "pyTranslate"
   args := [ "file" ]
   help := "Translate a Strata Python Ion file to Strata.Boogie. Write results to stdout."
   callback := fun _ v => do
-    let pgm ← readPythonStrata v[0]
-    let preludePgm := Strata.Python.Internal.Boogie.prelude
-    let bpgm := Strata.pythonToBoogie pgm
-    let newPgm : Boogie.Program := { decls := preludePgm.decls ++ bpgm.decls }
-    IO.print newPgm
+    Strata.Languages.Python.pyTranslate v[0]
 
 def pyAnalyzeCommand : Command where
   name := "pyAnalyze"
-  args := [ "file", "verbose" ]
-  help := "Analyze a Strata Python Ion file. Write results to stdout."
+  args := [ "file" ]
+  help := "Analyze a Strata Python Ion file. Write results to stdout. Use --verbose for verbose output, --noinline to disable inlining."
   callback := fun _ v => do
-    let verbose := v[1] == "1"
-    let pgm ← readPythonStrata v[0]
-    if verbose then
-      IO.print pgm
-    let preludePgm := Strata.Python.Internal.Boogie.prelude
-    let bpgm := Strata.pythonToBoogie pgm
-    let newPgm : Boogie.Program := { decls := preludePgm.decls ++ bpgm.decls }
-    if verbose then
-      IO.print newPgm
-    let newPgm := runInlineCall newPgm
-    if verbose then
-      IO.println "Inlined: "
-      IO.print newPgm
-    let vcResults ← EIO.toIO (fun f => IO.Error.userError (toString f))
-                        (Boogie.verify "z3" newPgm { Options.default with stopOnFirstError := false,
-                                                                          verbose,
-                                                                          removeIrrelevantAxioms := true }
-                                                   (moreFns := Strata.Python.ReFactory))
-    let mut s := ""
-    for vcResult in vcResults do
-      s := s ++ s!"\n{vcResult.obligation.label}: {Std.format vcResult.result}\n"
-    IO.println s
+    Strata.Languages.Python.pyAnalyze v[0] {}
+  flagsCallback := some (fun _ v flags => do
+    Strata.Languages.Python.pyAnalyze v[0] flags)
 
 def commandList : List Command := [
       checkCommand,
@@ -236,11 +205,22 @@ def main (args : List String) : IO Unit := do
       IO.println s!"  {args}: {cmd.help}"
     IO.println "\nFlags:"
     IO.println "  --include path: Adds a path to Strata for searching for dialects."
+    IO.println "  --verbose: Enable verbose output (for pyAnalyze command)."
+    IO.println "  --noinline: Disable inlining (for pyAnalyze command)."
   | cmd :: args =>
     match commandMap[cmd]? with
     | none => exitFailure s!"Unknown command {cmd}"
     | some cmd =>
       let expectedArgs := cmd.args.length
+      let rec extractFlags (args : List String) (flags : Strata.Languages.Python.CommandFlags) : (Strata.Languages.Python.CommandFlags × List String) :=
+        match args with
+        | [] => (flags, [])
+        | "--verbose" :: rest => extractFlags rest { flags with verbose := true }
+        | "--noinline" :: rest => extractFlags rest { flags with noinline := true }
+        | arg :: rest =>
+          let (f, r) := extractFlags rest flags
+          (f, arg :: r)
+      let (flags, remainingArgs) := extractFlags args {}
       let rec process (sp : Strata.DialectFileMap) args (cmdArgs : List String) : IO _ := do
             match cmdArgs with
             | cmd :: cmdArgs =>
@@ -257,9 +237,11 @@ def main (args : List String) : IO Unit := do
                 process sp (args.push cmd) cmdArgs
             | [] =>
               pure (sp, args)
-      let (sp, args) ← process {} #[] args
+      let (sp, args) ← process {} #[] remainingArgs
       if p : args.size = cmd.args.length then
-        cmd.callback sp ⟨args, p⟩
+        match cmd.flagsCallback with
+        | some flagsCb => flagsCb sp ⟨args, p⟩ flags
+        | none => cmd.callback sp ⟨args, p⟩
       else
         exitFailure s!"{cmd.name} expects {expectedArgs} argument(s)."
   | [] => do
diff --git a/StrataTest/Languages/Python/README.md b/StrataTest/Languages/Python/README.md
index 6ceb8853f..c0d42c529 100644
--- a/StrataTest/Languages/Python/README.md
+++ b/StrataTest/Languages/Python/README.md
@@ -16,3 +16,17 @@ python -m strata.gen py_to_strata ../../StrataTest/Languages/Python/test.py ../.
 ```
 lake exe strata pyAnalyze --include Tools/Python/test_results/dialects StrataTest/Languages/Python/test.python.st.ion
 ```
+
+## Run analysis with flags:
+```
+# Verbose output
+lake exe strata pyAnalyze --include Tools/Python/test_results/dialects --verbose StrataTest/Languages/Python/test.python.st.ion
+
+# Disable inlining (inlining is enabled by default)
+lake exe strata pyAnalyze --include Tools/Python/test_results/dialects --noinline StrataTest/Languages/Python/test.python.st.ion
+
+# Both flags (can appear in any order)
+lake exe strata pyAnalyze --include Tools/Python/test_results/dialects --verbose --noinline StrataTest/Languages/Python/test.python.st.ion
+```
+
+Note: Inlining is enabled by default. Use `--noinline` to disable it.
diff --git a/StrataTest/Languages/Python/run_py_analyze.sh b/StrataTest/Languages/Python/run_py_analyze.sh
index d15bac8b6..161279d91 100755
--- a/StrataTest/Languages/Python/run_py_analyze.sh
+++ b/StrataTest/Languages/Python/run_py_analyze.sh
@@ -11,7 +11,7 @@ for test_file in tests/test_*.py; do
         if [ -f "$expected_file" ]; then
             (cd ../../../Tools/Python && python -m strata.gen py_to_strata "../../StrataTest/Languages/Python/$test_file" "../../StrataTest/Languages/Python/$ion_file")
 
-            output=$(cd ../../.. && lake exe strata pyAnalyze --include Tools/Python/test_results/dialects "StrataTest/Languages/Python/${ion_file}" 0)
+            output=$(cd ../../.. && lake exe strata pyAnalyze --include Tools/Python/test_results/dialects "StrataTest/Languages/Python/${ion_file}")
 
             if ! echo "$output" | diff -q "$expected_file" - > /dev/null; then
                 echo "ERROR: Analysis output for $base_name does not match expected result"