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This repository was archived by the owner on Apr 19, 2023. It is now read-only.
Importing the VEP annotated vcf file using docker exec bravo_web_1 python manage.py variants hangs if "start_retained_variant" is present in the CSQ field.
Adding the consequence "start_retained_variant" to utils.py fixes the error:
Importing the VEP annotated vcf file using
docker exec bravo_web_1 python manage.py variantshangs if "start_retained_variant" is present in the CSQ field.Adding the consequence "start_retained_variant" to utils.py fixes the error: