diff --git a/.gitignore b/.gitignore
new file mode 100644
index 0000000..84d8ed9
--- /dev/null
+++ b/.gitignore
@@ -0,0 +1,120 @@
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+.coverage
+htmlcov/
+coverage.xml
+.tox/
+.nox/
+.coverage.*
+
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+.claude/*
+
+# Python
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+*.py[cod]
+*$py.class
+*.so
+.Python
+env/
+venv/
+ENV/
+env.bak/
+venv.bak/
+.env
+.venv
+
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+.Python
+build/
+develop-eggs/
+dist/
+downloads/
+eggs/
+.eggs/
+lib/
+lib64/
+parts/
+sdist/
+var/
+wheels/
+*.egg-info/
+.installed.cfg
+*.egg
+MANIFEST
+
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+.virtualenv/
+venv/
+virtualenv/
+ENV/
+env/
+
+# IDE
+.vscode/
+.idea/
+*.swp
+*.swo
+*~
+.DS_Store
+
+# Jupyter Notebook
+.ipynb_checkpoints
+
+# PyTorch
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+*.pt
+checkpoints/
+logs/
+runs/
+
+# Data directories (project specific)
+data/
+concode/
+models/
+outputs/
+
+# Temporary files
+*.tmp
+*.temp
+.tmp/
+.temp/
+
+# OS generated files
+.DS_Store
+.DS_Store?
+._*
+.Spotlight-V100
+.Trashes
+ehthumbs.db
+Thumbs.db
+
+# Logs
+*.log
+logs/
+
+# Cache
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+.mypy_cache/
+.dmypy.json
+dmypy.json
+
+# Documentation builds
+docs/_build/
+site/
+
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+*.spec
+
+# Unit test / coverage reports
+htmlcov/
+.tox/
+.coverage
+.coverage.*
+.cache
+nosetests.xml
+coverage.xml
+*.cover
+.hypothesis/
\ No newline at end of file
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index 0000000..3bde86b
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+test = ["argcomplete (>=3.0.3)", "mypy (>=1.7.0)", "pre-commit", "pytest (>=7.0,<8.2)", "pytest-mock", "pytest-mypy-testing"]
+
+[[package]]
+name = "triton"
+version = "3.1.0"
+description = "A language and compiler for custom Deep Learning operations"
+optional = false
+python-versions = "*"
+groups = ["main"]
+markers = "platform_system == \"Linux\" and platform_machine == \"x86_64\" and python_version == \"3.8\""
+files = [
+    {file = "triton-3.1.0-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl", hash = "sha256:6b0dd10a925263abbe9fa37dcde67a5e9b2383fc269fdf59f5657cac38c5d1d8"},
+    {file = "triton-3.1.0-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl", hash = "sha256:0f34f6e7885d1bf0eaaf7ba875a5f0ce6f3c13ba98f9503651c1e6dc6757ed5c"},
+    {file = "triton-3.1.0-cp312-cp312-manylinux_2_17_x86_64.manylinux2014_x86_64.whl", hash = "sha256:c8182f42fd8080a7d39d666814fa36c5e30cc00ea7eeeb1a2983dbb4c99a0fdc"},
+    {file = "triton-3.1.0-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl", hash = "sha256:6dadaca7fc24de34e180271b5cf864c16755702e9f63a16f62df714a8099126a"},
+    {file = "triton-3.1.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl", hash = "sha256:aafa9a20cd0d9fee523cd4504aa7131807a864cd77dcf6efe7e981f18b8c6c11"},
+]
+
+[package.dependencies]
+filelock = "*"
+
+[package.extras]
+build = ["cmake (>=3.20)", "lit"]
+tests = ["autopep8", "flake8", "isort", "llnl-hatchet", "numpy", "pytest", "scipy (>=1.7.1)"]
+tutorials = ["matplotlib", "pandas", "tabulate"]
+
+[[package]]
+name = "triton"
+version = "3.3.1"
+description = "A language and compiler for custom Deep Learning operations"
+optional = false
+python-versions = "*"
+groups = ["main"]
+markers = "platform_system == \"Linux\" and platform_machine == \"x86_64\" and python_version >= \"3.9\""
+files = [
+    {file = "triton-3.3.1-cp310-cp310-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl", hash = "sha256:b74db445b1c562844d3cfad6e9679c72e93fdfb1a90a24052b03bb5c49d1242e"},
+    {file = "triton-3.3.1-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl", hash = "sha256:b31e3aa26f8cb3cc5bf4e187bf737cbacf17311e1112b781d4a059353dfd731b"},
+    {file = "triton-3.3.1-cp312-cp312-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl", hash = "sha256:9999e83aba21e1a78c1f36f21bce621b77bcaa530277a50484a7cb4a822f6e43"},
+    {file = "triton-3.3.1-cp313-cp313-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl", hash = "sha256:b89d846b5a4198317fec27a5d3a609ea96b6d557ff44b56c23176546023c4240"},
+    {file = "triton-3.3.1-cp313-cp313t-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl", hash = "sha256:a3198adb9d78b77818a5388bff89fa72ff36f9da0bc689db2f0a651a67ce6a42"},
+    {file = "triton-3.3.1-cp39-cp39-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl", hash = "sha256:f6139aeb04a146b0b8e0fbbd89ad1e65861c57cfed881f21d62d3cb94a36bab7"},
+]
+
+[package.dependencies]
+setuptools = ">=40.8.0"
+
+[package.extras]
+build = ["cmake (>=3.20)", "lit"]
+tests = ["autopep8", "isort", "llnl-hatchet", "numpy", "pytest", "pytest-forked", "pytest-xdist", "scipy (>=1.7.1)"]
+tutorials = ["matplotlib", "pandas", "tabulate"]
+
+[[package]]
+name = "typing-extensions"
+version = "4.13.2"
+description = "Backported and Experimental Type Hints for Python 3.8+"
+optional = false
+python-versions = ">=3.8"
+groups = ["main", "test"]
+markers = "python_version == \"3.8\""
+files = [
+    {file = "typing_extensions-4.13.2-py3-none-any.whl", hash = "sha256:a439e7c04b49fec3e5d3e2beaa21755cadbbdc391694e28ccdd36ca4a1408f8c"},
+    {file = "typing_extensions-4.13.2.tar.gz", hash = "sha256:e6c81219bd689f51865d9e372991c540bda33a0379d5573cddb9a3a23f7caaef"},
+]
+
+[[package]]
+name = "typing-extensions"
+version = "4.15.0"
+description = "Backported and Experimental Type Hints for Python 3.9+"
+optional = false
+python-versions = ">=3.9"
+groups = ["main", "test"]
+files = [
+    {file = "typing_extensions-4.15.0-py3-none-any.whl", hash = "sha256:f0fa19c6845758ab08074a0cfa8b7aecb71c999ca73d62883bc25cc018c4e548"},
+    {file = "typing_extensions-4.15.0.tar.gz", hash = "sha256:0cea48d173cc12fa28ecabc3b837ea3cf6f38c6d1136f85cbaaf598984861466"},
+]
+markers = {main = "python_version >= \"3.9\"", test = "python_version >= \"3.9\" and python_version < \"3.11\""}
+
+[[package]]
+name = "wcwidth"
+version = "0.2.13"
+description = "Measures the displayed width of unicode strings in a terminal"
+optional = false
+python-versions = "*"
+groups = ["main"]
+files = [
+    {file = "wcwidth-0.2.13-py2.py3-none-any.whl", hash = "sha256:3da69048e4540d84af32131829ff948f1e022c1c6bdb8d6102117aac784f6859"},
+    {file = "wcwidth-0.2.13.tar.gz", hash = "sha256:72ea0c06399eb286d978fdedb6923a9eb47e1c486ce63e9b4e64fc18303972b5"},
+]
+
+[metadata]
+lock-version = "2.1"
+python-versions = "^3.8"
+content-hash = "39358787610ea6763b3ad7e397b437dfd68b6f5fb54ec7cd948f96def9a06e2e"
diff --git a/pyproject.toml b/pyproject.toml
new file mode 100644
index 0000000..1959d62
--- /dev/null
+++ b/pyproject.toml
@@ -0,0 +1,75 @@
+[tool.poetry]
+name = "concode-mapping"
+version = "1.0.0"
+description = "Mapping Language to Code in Programmatic Context"
+authors = ["Research Team"]
+readme = "README.md"
+packages = [{include = ".", from = "."}]
+
+[tool.poetry.dependencies]
+python = "^3.8"
+torch = ">=1.0.0"
+antlr4-python3-runtime = "==4.6"
+ipython = "^7.0.0"
+numpy = "^1.21.0"
+
+[tool.poetry.group.test.dependencies]
+pytest = "^7.0.0"
+pytest-cov = "^4.0.0"
+pytest-mock = "^3.10.0"
+
+
+[build-system]
+requires = ["poetry-core"]
+build-backend = "poetry.core.masonry.api"
+
+[tool.pytest.ini_options]
+minversion = "6.0"
+addopts = "-ra -q --strict-markers --strict-config"
+testpaths = [
+    "tests",
+]
+python_files = [
+    "test_*.py",
+    "*_test.py",
+]
+python_classes = [
+    "Test*",
+]
+python_functions = [
+    "test_*",
+]
+markers = [
+    "unit: marks tests as unit tests (deselect with '-m \"not unit\"')",
+    "integration: marks tests as integration tests (deselect with '-m \"not integration\"')",
+    "slow: marks tests as slow (deselect with '-m \"not slow\"')",
+]
+filterwarnings = [
+    "error",
+    "ignore::UserWarning",
+    "ignore::DeprecationWarning",
+]
+
+[tool.coverage.run]
+source = ["."]
+omit = [
+    "tests/*",
+    "java/*",
+    "tools/*",
+    "concode/*",
+    "data/*",
+    "*/site-packages/*",
+    "*/__pycache__/*",
+    "build.py",
+]
+
+[tool.coverage.report]
+show_missing = true
+skip_covered = false
+fail_under = 80
+
+[tool.coverage.html]
+directory = "htmlcov"
+
+[tool.coverage.xml]
+output = "coverage.xml"
\ No newline at end of file
diff --git a/tests/__init__.py b/tests/__init__.py
new file mode 100644
index 0000000..e69de29
diff --git a/tests/conftest.py b/tests/conftest.py
new file mode 100644
index 0000000..8676157
--- /dev/null
+++ b/tests/conftest.py
@@ -0,0 +1,209 @@
+import pytest
+import tempfile
+import shutil
+import os
+import json
+from pathlib import Path
+from typing import Dict, Any, List
+from unittest.mock import Mock
+
+
+@pytest.fixture
+def temp_dir():
+    """Create a temporary directory for test files."""
+    temp_path = tempfile.mkdtemp()
+    yield Path(temp_path)
+    shutil.rmtree(temp_path)
+
+
+@pytest.fixture
+def temp_file(temp_dir):
+    """Create a temporary file in the temp directory."""
+    temp_file_path = temp_dir / "test_file.txt"
+    temp_file_path.touch()
+    yield temp_file_path
+
+
+@pytest.fixture
+def sample_json_data():
+    """Sample JSON data for testing."""
+    return {
+        "id": 1,
+        "name": "test_sample",
+        "code": "def hello():\n    print('Hello, World!')",
+        "nl": "A function that prints hello world",
+        "path": "test/path.java"
+    }
+
+
+@pytest.fixture
+def sample_dataset(temp_dir, sample_json_data):
+    """Create a sample dataset file for testing."""
+    dataset_file = temp_dir / "sample.dataset"
+    with open(dataset_file, 'w') as f:
+        json.dump(sample_json_data, f)
+    return dataset_file
+
+
+@pytest.fixture
+def mock_model():
+    """Mock model for testing without actual PyTorch dependencies."""
+    mock = Mock()
+    mock.eval.return_value = None
+    mock.forward.return_value = Mock()
+    return mock
+
+
+@pytest.fixture
+def mock_encoder():
+    """Mock encoder for testing."""
+    mock = Mock()
+    mock.encode.return_value = ([1, 2, 3], [0.1, 0.2, 0.3])
+    return mock
+
+
+@pytest.fixture
+def mock_decoder():
+    """Mock decoder for testing."""
+    mock = Mock()
+    mock.decode.return_value = [1, 2, 3, 4]
+    return mock
+
+
+@pytest.fixture
+def sample_vocabulary():
+    """Sample vocabulary for testing."""
+    return {
+        'src': {'<pad>': 0, '<unk>': 1, 'def': 2, 'hello': 3, '(': 4, ')': 5, ':': 6},
+        'tgt': {'<pad>': 0, '<unk>': 1, '<s>': 2, '</s>': 3, 'public': 4, 'void': 5, 'main': 6}
+    }
+
+
+@pytest.fixture
+def sample_config():
+    """Sample configuration for model testing."""
+    return {
+        'model_type': 'concode',
+        'hidden_size': 512,
+        'num_layers': 2,
+        'dropout': 0.5,
+        'learning_rate': 0.001,
+        'batch_size': 20,
+        'max_seq_length': 100
+    }
+
+
+@pytest.fixture
+def mock_statistics():
+    """Mock statistics object for testing."""
+    mock = Mock()
+    mock.start_time = 0
+    mock.n_words = 0
+    mock.n_correct = 0
+    mock.n_src_words = 0
+    mock.loss = 0.0
+    return mock
+
+
+@pytest.fixture
+def sample_beam_data():
+    """Sample data for beam search testing."""
+    return {
+        'beam_size': 3,
+        'max_length': 100,
+        'n_best': 1,
+        'scores': [0.9, 0.8, 0.7],
+        'predictions': [
+            [2, 4, 5, 6, 3],
+            [2, 4, 7, 6, 3],
+            [2, 8, 5, 6, 3]
+        ]
+    }
+
+
+@pytest.fixture
+def java_code_sample():
+    """Sample Java code for testing."""
+    return """
+public class HelloWorld {
+    public static void main(String[] args) {
+        System.out.println("Hello, World!");
+    }
+}
+    """
+
+
+@pytest.fixture
+def python_code_sample():
+    """Sample Python code for testing."""
+    return """
+def hello_world():
+    print("Hello, World!")
+    return "Hello, World!"
+    """
+
+
+@pytest.fixture
+def mock_training_data():
+    """Mock training data for testing."""
+    return {
+        'train': [
+            {'src': [2, 3, 4, 5], 'tgt': [2, 4, 5, 6, 3], 'id': 1},
+            {'src': [2, 7, 4, 5], 'tgt': [2, 8, 5, 6, 3], 'id': 2},
+        ],
+        'valid': [
+            {'src': [2, 9, 4, 5], 'tgt': [2, 10, 5, 6, 3], 'id': 3},
+        ]
+    }
+
+
+@pytest.fixture
+def capture_output():
+    """Fixture to capture stdout/stderr for testing."""
+    import sys
+    from io import StringIO
+    
+    old_stdout = sys.stdout
+    old_stderr = sys.stderr
+    
+    captured_out = StringIO()
+    captured_err = StringIO()
+    
+    sys.stdout = captured_out
+    sys.stderr = captured_err
+    
+    yield captured_out, captured_err
+    
+    sys.stdout = old_stdout
+    sys.stderr = old_stderr
+
+
+@pytest.fixture(autouse=True)
+def reset_random_seeds():
+    """Reset random seeds before each test for reproducibility."""
+    import random
+    
+    random.seed(42)
+    
+    # Reset numpy seed if available
+    try:
+        import numpy as np
+        np.random.seed(42)
+    except ImportError:
+        pass
+    
+    # Reset PyTorch seed if available
+    try:
+        import torch
+        torch.manual_seed(42)
+        if torch.cuda.is_available():
+            torch.cuda.manual_seed(42)
+            torch.cuda.manual_seed_all(42)
+    except ImportError:
+        pass
+
+
+@pytest.fixture
+def project_root():
+    """Get the project root directory."""
+    return Path(__file__).parent.parent
\ No newline at end of file
diff --git a/tests/integration/__init__.py b/tests/integration/__init__.py
new file mode 100644
index 0000000..e69de29
diff --git a/tests/test_infrastructure_validation.py b/tests/test_infrastructure_validation.py
new file mode 100644
index 0000000..c2abb36
--- /dev/null
+++ b/tests/test_infrastructure_validation.py
@@ -0,0 +1,180 @@
+"""
+Validation tests to ensure the testing infrastructure is set up correctly.
+These tests verify that the testing environment works as expected.
+"""
+
+import pytest
+import json
+from pathlib import Path
+
+
+class TestInfrastructureValidation:
+    """Test suite to validate the testing infrastructure setup."""
+    
+    def test_pytest_markers_available(self):
+        """Test that custom pytest markers are available."""
+        from _pytest.config import get_config
+        
+        # This will pass if pytest is configured correctly
+        assert True
+    
+    @pytest.mark.unit
+    def test_unit_marker(self):
+        """Test that unit marker works."""
+        assert True
+    
+    @pytest.mark.integration
+    def test_integration_marker(self):
+        """Test that integration marker works."""
+        assert True
+    
+    @pytest.mark.slow
+    def test_slow_marker(self):
+        """Test that slow marker works."""
+        assert True
+    
+    def test_temp_dir_fixture(self, temp_dir):
+        """Test that temp_dir fixture works correctly."""
+        assert temp_dir.exists()
+        assert temp_dir.is_dir()
+        
+        # Create a test file
+        test_file = temp_dir / "test.txt"
+        test_file.write_text("test content")
+        
+        assert test_file.exists()
+        assert test_file.read_text() == "test content"
+    
+    def test_temp_file_fixture(self, temp_file):
+        """Test that temp_file fixture works correctly."""
+        assert temp_file.exists()
+        assert temp_file.is_file()
+        
+        # Write to the file
+        temp_file.write_text("test data")
+        assert temp_file.read_text() == "test data"
+    
+    def test_sample_json_data_fixture(self, sample_json_data):
+        """Test that sample_json_data fixture provides valid data."""
+        assert isinstance(sample_json_data, dict)
+        assert "id" in sample_json_data
+        assert "name" in sample_json_data
+        assert "code" in sample_json_data
+        assert "nl" in sample_json_data
+        assert "path" in sample_json_data
+    
+    def test_sample_dataset_fixture(self, sample_dataset, sample_json_data):
+        """Test that sample_dataset fixture creates a valid dataset file."""
+        assert sample_dataset.exists()
+        
+        # Read and verify content
+        with open(sample_dataset, 'r') as f:
+            data = json.load(f)
+        
+        assert data == sample_json_data
+    
+    def test_mock_fixtures(self, mock_model, mock_encoder, mock_decoder):
+        """Test that mock fixtures are properly configured."""
+        # Test mock model
+        assert mock_model is not None
+        assert hasattr(mock_model, 'eval')
+        assert hasattr(mock_model, 'forward')
+        
+        # Test mock encoder
+        assert mock_encoder is not None
+        assert hasattr(mock_encoder, 'encode')
+        result = mock_encoder.encode()
+        assert isinstance(result, tuple)
+        assert len(result) == 2
+        
+        # Test mock decoder
+        assert mock_decoder is not None
+        assert hasattr(mock_decoder, 'decode')
+        result = mock_decoder.decode()
+        assert isinstance(result, list)
+    
+    def test_vocabulary_fixture(self, sample_vocabulary):
+        """Test that sample_vocabulary fixture provides valid vocabulary."""
+        assert isinstance(sample_vocabulary, dict)
+        assert "src" in sample_vocabulary
+        assert "tgt" in sample_vocabulary
+        assert isinstance(sample_vocabulary["src"], dict)
+        assert isinstance(sample_vocabulary["tgt"], dict)
+    
+    def test_config_fixture(self, sample_config):
+        """Test that sample_config fixture provides valid configuration."""
+        assert isinstance(sample_config, dict)
+        required_keys = ['model_type', 'hidden_size', 'num_layers', 'dropout']
+        for key in required_keys:
+            assert key in sample_config
+    
+    def test_code_samples(self, java_code_sample, python_code_sample):
+        """Test that code sample fixtures provide valid code strings."""
+        assert isinstance(java_code_sample, str)
+        assert "public class" in java_code_sample
+        assert "main" in java_code_sample
+        
+        assert isinstance(python_code_sample, str)
+        assert "def " in python_code_sample
+        assert "print" in python_code_sample
+    
+    def test_project_root_fixture(self, project_root):
+        """Test that project_root fixture points to correct directory."""
+        assert project_root.exists()
+        assert project_root.is_dir()
+        
+        # Should contain main project files
+        expected_files = ['README.md', 'pyproject.toml']
+        for file_name in expected_files:
+            assert (project_root / file_name).exists()
+    
+    def test_pytest_config_loaded(self):
+        """Test that pytest configuration is loaded correctly."""
+        import pytest
+        
+        # This test will pass if pytest can run without configuration errors
+        assert pytest is not None
+    
+    def test_coverage_can_be_imported(self):
+        """Test that coverage tools can be imported (if installed)."""
+        try:
+            import coverage
+            assert coverage is not None
+        except ImportError:
+            pytest.skip("Coverage not installed yet")
+    
+    def test_mock_can_be_imported(self):
+        """Test that pytest-mock functionality is available."""
+        try:
+            from unittest.mock import Mock
+            mock = Mock()
+            assert mock is not None
+        except ImportError:
+            pytest.skip("Mock functionality not available")
+
+
+class TestEnvironmentValidation:
+    """Test suite to validate the Python environment."""
+    
+    def test_python_version(self):
+        """Test that Python version is compatible."""
+        import sys
+        assert sys.version_info >= (3, 7), "Python 3.7+ required"
+    
+    def test_pathlib_available(self):
+        """Test that pathlib is available."""
+        from pathlib import Path
+        test_path = Path(".")
+        assert test_path.exists()
+    
+    def test_json_module_available(self):
+        """Test that json module works correctly."""
+        import json
+        test_data = {"test": "data"}
+        json_str = json.dumps(test_data)
+        parsed_data = json.loads(json_str)
+        assert parsed_data == test_data
+
+
+if __name__ == "__main__":
+    pytest.main([__file__])
\ No newline at end of file
diff --git a/tests/unit/__init__.py b/tests/unit/__init__.py
new file mode 100644
index 0000000..e69de29