diff --git a/.gitignore b/.gitignore new file mode 100644 index 000000000..a273eef19 --- /dev/null +++ b/.gitignore @@ -0,0 +1,101 @@ +# Byte-compiled / optimized / DLL files +__pycache__/ +*.py[cod] +*$py.class + +# C extensions +*.so + +# Distribution / packaging +.Python +env/ +build/ +develop-eggs/ +dist/ +downloads/ +eggs/ +.eggs/ +lib/ +lib64/ +parts/ +sdist/ +var/ +*.egg-info/ +.installed.cfg +*.egg + +# PyInstaller +# Usually these files are written by a python script from a template +# before PyInstaller builds the exe, so as to inject date/other infos into it. +*.manifest +*.spec + +# Installer logs +pip-log.txt +pip-delete-this-directory.txt + +# Unit test / coverage reports +htmlcov/ +.tox/ +.coverage +.coverage.* +.cache +nosetests.xml +coverage.xml +*,cover +.hypothesis/ + +# Translations +*.mo +*.pot + +# Django stuff: +*.log +local_settings.py + +# Flask stuff: +instance/ +.webassets-cache + +# Scrapy stuff: +.scrapy + +# Sphinx documentation +docs/_build/ + +# PyBuilder +target/ + +# IPython Notebook +.ipynb_checkpoints + +# pyenv +.python-version + +# celery beat schedule file +celerybeat-schedule + +# dotenv +.env + +# virtualenv +venv/ +ENV/ + +# Spyder project settings +.spyderproject + +# Rope project settings +.ropeproject + +# PyCharm project settings +.idea/* + +*.pickle +*.gpickle + +scratch +scratch/* + +.pytest_cache +.DS_Store diff --git a/.travis.yml b/.travis.yml index 04320e5bb..dc7b60aba 100644 --- a/.travis.yml +++ b/.travis.yml @@ -4,25 +4,21 @@ python: before_install: - sudo apt-get install graphviz - pwd - - pip install future requests pygraphviz - - if [[ "$TRAVIS_PYTHON_VERSION" == "2.7" ]]; then - pip install functools32; - fi + - pip install future requests pygraphviz bel_resources - git clone https://github.com/sorgerlab/indra.git script: - pwd - echo $TRAVIS_BUILD_DIR - export PYTHONPATH=$PYTHONPATH:$TRAVIS_BUILD_DIR/indra - - python check_references.py - - python export/relations_graph.py + - python famplex/check_references.py + - python famplex/export/export_relations_graph.py # test if exports have been updated # bel_resources must be installed to generate belns exports # generate exports then take git diff and look only at lines that changed # lines containing date, timestamp, or version should be ignored - - pip install bel_resources - - python export/obo.py - - python export/hgnc_ids.py - - python export/belns.py + - python famplex/export/export_obo.py + - python famplex/export/hgnc_ids.py + - python famplex/export/export_belns.py - export belns_diff=$(git diff -U0 export/famplex.belns | egrep "^[\+-][^\+-]") - export belns=$(echo "$belns_diff" | egrep -v "^[\+-](VersionString|CreatedDateTime)") - export obo_diff=$(git diff -U0 export/famplex.obo | egrep "^[\+-][^\+-]") diff --git a/README.md b/README.md index 93996b60c..c9ce4320e 100644 --- a/README.md +++ b/README.md @@ -31,6 +31,10 @@ the FamPlex namespace. * ```entities.csv```. A registry of the families and complexes defined in the FamPlex namespace. + +* ```descriptions.csv```. Descriptions and citations of some entities. Contains + three columns: the FamPlex name, comma separated reference CURIEs, and a + textual description. * ```grounding_map.csv```. Explicit mapping of text strings to identifiers in biological databases. @@ -61,7 +65,7 @@ relationships, including sub-families (families within families) and complexes consisting of families of related subunits (e.g., PI3K, NF-kB). The ```relations.csv``` file consists of five columns: (1) the namespace for -the subject (e.g., ```HGNC``` for gene names, ```UP``` for Uniprot, or +the subject (e.g., ```HGNC``` for gene names, ```UP``` for UniProt, or ```FPLX``` for the FamPlex namespace), (2) the identifier for the subject, (3) the relationship (```isa``` or ```partof```), (4) the namespace for the object, and (5) the identifier for the object. @@ -87,10 +91,10 @@ cancer. Entities are grounded to the following databases: -* Genes/proteins: [Uniprot](http://www.uniprot.org) +* Genes/proteins: [UniProt](http://www.uniprot.org) * Chemicals: [PubChem](https://pubchem.ncbi.nlm.nih.gov/), - [CHEBI](https://www.ebi.ac.uk/chebi/), and [HMDB](http://www.hmdb.ca/) (for + [ChEBI](https://www.ebi.ac.uk/chebi/), and [HMDB](http://www.hmdb.ca/) (for metabolites) * Biological processes: [GO](http://geneontology.org/) and @@ -99,7 +103,7 @@ Entities are grounded to the following databases: * Protein families and named complexes: grounded to entities defined within the FamPlex repository in the ```entities.csv``` and ```relations.csv``` files, and to identifiers in [PFAM](http://pfam.xfam.org/) - and [Interpro](https://www.ebi.ac.uk/interpro/) when possible. + and [InterPro](https://www.ebi.ac.uk/interpro/) when possible. ## Gene prefixes diff --git a/check_references.py b/check_references.py deleted file mode 100644 index 93d80912d..000000000 --- a/check_references.py +++ /dev/null @@ -1,322 +0,0 @@ -from __future__ import print_function, unicode_literals -import csv -import sys -from collections import Counter - - -def read_csv(fh, delimiter, quotechar): - if sys.version_info.major < 3: - csvreader = csv.reader(fh, delimiter=bytes(delimiter), - quotechar=bytes(quotechar)) - rows = [[cell.decode('utf-8') for cell in row] for row in csvreader] - else: - csvreader = csv.reader(fh, delimiter=delimiter, quotechar=quotechar) - rows = [row for row in csvreader] - return rows - - -def load_csv(filename): - with open(filename) as f: - rows = read_csv(f, ',', '"') - return rows - - -def load_grounding_map(filename): - gm_rows = load_csv(filename) - gm_tuples = [] - check_rows(gm_rows, 7, filename) - g_map = {} - for row in gm_rows: - gm_tuples.append(tuple(row)) - key = row[0] - db_refs = {'TEXT': key} - keys = [entry for entry in row[1::2] if entry != ''] - values = [entry for entry in row[2::2] if entry != ''] - if len(keys) != len(values): - print('ERROR: Mismatched keys and values in row %s' % str(row)) - continue - else: - db_refs.update(dict(zip(keys, values))) - if len(db_refs.keys()) > 1: - g_map[key] = db_refs - else: - g_map[key] = None - return g_map, tuple(gm_tuples) - - -def check_file_rows(filename, row_length): - with open(filename) as f: - rows = read_csv(f, ',', '"') - check_rows(rows, row_length, filename) - - -def check_rows(rows, row_length, filename): - for ix, row in enumerate(rows): - if len(row) != row_length: - print("ERROR: Line %d in file %s has %d columns, should be %d" % - ((ix + 1), filename, len(row), row_length)) - - -def load_entity_list(filename): - with open(filename) as f: - rows = read_csv(f, ',', '"') - check_rows(rows, 1, filename) - entities = [row[0] for row in rows] - return entities - - -def load_relationships(filename): - relationships = [] - with open(filename) as f: - rows = read_csv(f, ',', '"') - check_rows(rows, 5, filename) - for row in rows: - relationships.append(((row[0], row[1]), row[2], (row[3], row[4]))) - return relationships - - -def load_equivalences(filename): - equivalences = [] - with open(filename) as f: - rows = read_csv(f, ',', '"') - check_rows(rows, 3, filename) - for row in rows: - equivalences.append((row[0], row[1], row[2])) - return equivalences - - -def update_id_prefixes(filename): - gm_rows = load_csv(filename) - updated_rows = [] - for row in gm_rows: - key = row[0] - keys = [entry for entry in row[1::2]] - values = [entry for entry in row[2::2]] - if 'GO' in keys: - go_ix = keys.index('GO') - values[go_ix] = 'GO:%s' % values[go_ix] - if 'CHEBI' in keys: - chebi_ix = keys.index('CHEBI') - values[chebi_ix] = 'CHEBI:%s' % values[chebi_ix] - if 'CHEMBL' in keys: - chembl_ix = keys.index('CHEMBL') - values[chembl_ix] = 'CHEMBL%s' % values[chembl_ix] - updated_row = [key] - for pair in zip(keys, values): - updated_row += pair - updated_rows.append(updated_row) - return updated_rows - - -def pubchem_and_chebi(db_refs): - pubchem_id = db_refs.get('PUBCHEM') - chebi_id = db_refs.get('CHEBI') - if pubchem_id and not chebi_id: - return 'chebi_missing' - if chebi_id and not pubchem_id: - return 'pubchem_missing' - return None - - -def check_duplicates(entries, entry_label): - ent_counter = Counter(entries) - print("-- Checking for duplicate %s --" % entry_label) - found_duplicates = False - for ent, freq in ent_counter.items(): - if freq > 1: - print("ERROR: Duplicate %s in %s." % (str(ent), entry_label)) - found_duplicates = True - print() - return found_duplicates - - -if __name__ == '__main__': - signal_error = False - entities = load_entity_list('entities.csv') - relationships = load_relationships('relations.csv') - equivalences = load_equivalences('equivalences.csv') - gm, gm_tuples = load_grounding_map('grounding_map.csv') - check_file_rows('gene_prefixes.csv', 3) - - for entries, entry_label in ((entities, 'entities'), - (relationships, 'relationships'), - (equivalences, 'equivalences'), - (gm_tuples, 'groundings')): - if check_duplicates(entries, entry_label): - signal_error = True - - print("-- Checking for undeclared FamPlex IDs in grounding map --") - # Look through grounding map and find all instances with an FPLX db key - entities_missing_gm = [] - for text, db_refs in gm.items(): - if db_refs is not None: - for db_key, db_id in db_refs.items(): - if db_key == 'FPLX' and db_id not in entities: - entities_missing_gm.append(db_id) - print("ERROR: ID %s referenced in grounding map " - "is not in entities list." % db_id) - signal_error = True - - print() - print("-- Checking for CHEBI/PUBCHEM IDs--") - chebi_id_missing = [] - pubchem_id_missing = [] - for text, db_refs in gm.items(): - if db_refs is not None: - p_and_c = pubchem_and_chebi(db_refs) - if p_and_c == 'chebi_missing': - chebi_id_missing.append(db_refs['PUBCHEM']) - print("WARNING: %s has PUBCHEM ID (%s) but no CHEBI ID." - % (text, db_refs['PUBCHEM'])) - if p_and_c == 'pubchem_missing': - pubchem_id_missing.append(db_refs['CHEBI']) - print("WARNING: %s has CHEBI ID (%s) but no PUBCHEM ID." % - (text, db_refs['CHEBI'])) - - print() - print("-- Checking for undeclared FamPlex IDs in relationships file --") - # Load the relationships - # Check the relationships for consistency with entities - entities_missing_rel = [] - for subj, rel, obj in relationships: - for term in (subj, obj): - term_ns = term[0] - term_id = term[1] - if term_ns == 'FPLX' and term_id not in entities: - entities_missing_rel.append(term_id) - print("ERROR: ID %s referenced in relations " - "is not in entities list." % term_id) - signal_error = True - print() - print("-- Checking for valid namespaces in relations --") - for ix, (subj, rel, obj) in enumerate(relationships): - for term in (subj, obj): - term_ns = term[0] - if term_ns not in ('FPLX', 'HGNC', 'UP'): - print("ERROR: row %d: Invalid namespace in relations.csv: %s" % - (ix+1, term_ns)) - signal_error = True - - # This check requires the indra package - try: - from indra.databases import hgnc_client - print() - print("-- Checking for invalid HGNC IDs in relationships file --") - for subj, rel, obj in relationships: - for term in (subj, obj): - term_ns = term[0] - term_id = term[1] - if term_ns == 'HGNC': - hgnc_id = hgnc_client.get_hgnc_id(term_id) - if not hgnc_id: - print("ERROR: ID %s referenced in relations is " - "not a valid HGNC ID." % term_id) - signal_error = True - except ImportError as e: - print('HGNC check could not be performed because of import error') - print(e) - signal_error = True - pass - - # This check requires the indra package - try: - from indra.databases import hgnc_client - print() - print("-- Checking for invalid HGNC IDs in grounding map --") - for text, db_refs in gm.items(): - if db_refs is not None: - for db_key, db_id in db_refs.items(): - if db_key == 'HGNC': - hgnc_id = hgnc_client.get_hgnc_id(db_id) - if not hgnc_id: - print("ERROR: ID %s in grounding map is " - "not a valid HGNC ID." % db_id) - signal_error = True - except ImportError: - print('HGNC check could not be performed because of import error') - print(e) - signal_error = True - pass - - # This check requires a ChEBI resource file to be available. You - # can obtain it from here: ftp://ftp.ebi.ac.uk/pub/databases/ - # chebi/Flat_file_tab_delimited/compounds.tsv.gz - try: - with open('chebi_compounds.tsv', 'rt') as fh: - chebi_ids = [lin.split('\t')[2] for lin in fh.readlines()] - print() - print("-- Checking for invalid ChEBI IDs in grounding map --") - for text, db_refs in gm.items(): - if db_refs is not None: - for db_key, db_id in db_refs.items(): - if db_key == 'CHEBI': - if db_id not in chebi_ids: - print("ERROR: ID %s in grounding map is " - "not a valid CHEBI ID." % db_id) - except IOError: - pass - - print() - print("-- Checking for FamPlexes whose relationships are undefined --") - # Check the relationships for consistency with entities - rel_missing_entities = [] - for ent in entities: - found = False - for subj, rel, obj in relationships: - subj_ns = subj[0] - subj_id = subj[1] - obj_ns = obj[0] - obj_id = obj[1] - if subj_ns == 'FPLX' and subj_id == ent: - found = True - break - if obj_ns == 'FPLX' and obj_id == ent: - found = True - break - if not found: - rel_missing_entities.append(ent) - print("WARNING: ID %s has no known relations." % ent) - - print() - print("-- Checking for non-existent FamPlexes in equivalences --") - entities_missing_eq = [] - for eq_ns, eq_id, be_id in equivalences: - if be_id not in entities: - signal_error = True - entities_missing_eq.append(be_id) - print("ERROR: ID %s referenced in equivalences " - "is not in entities list." % be_id) - print() - print("-- Checking for duplicate equivalences --") - equiv_counter = Counter(equivalences) - duplicate_eq = [item for item, count in equiv_counter.items() - if count > 1] - if duplicate_eq: - print("ERROR: Duplicate equivalences found:") - for dup in duplicate_eq: - print(dup) - - # This check requires the requests package to be installed - try: - import requests - import logging - logging.getLogger('requests').setLevel(logging.CRITICAL) - logging.getLogger('urllib3').setLevel(logging.CRITICAL) - print() - print("-- Checking for invalid PUBCHEM CIDs in grounding map --") - pubchem_url = 'https://pubchem.ncbi.nlm.nih.gov/rest/pug/compound/' + \ - 'cid/%s/description/XML' - for text, db_refs in gm.items(): - if db_refs is not None: - for db_key, db_id in db_refs.items(): - if db_key == 'PUBCHEM': - res = requests.get(pubchem_url % db_id) - if res.status_code != 200: - print("ERROR: ID %s in grounding map is " - "not a valid PUBCHEM ID." % db_id) - except ImportError: - pass - - if signal_error: - sys.exit(1) - sys.exit(0) diff --git a/descriptions.csv b/descriptions.csv new file mode 100644 index 000000000..2b014b150 --- /dev/null +++ b/descriptions.csv @@ -0,0 +1 @@ +CBF3,interpro:IPR016072,"SKP1 (together with SKP2) was identified as an essential component of the cyclin A-CDK2 S phase kinase complex" diff --git a/export/__init__.py b/export/__init__.py deleted file mode 100644 index e69de29bb..000000000 diff --git a/export/famplex.belns b/export/famplex.belns index 4d18c7c15..23b26d4eb 100644 --- a/export/famplex.belns +++ b/export/famplex.belns @@ -2,8 +2,8 @@ Keyword=FPLX NameString=FamPlex DomainString=Gene and Gene Products -VersionString=20190714 -CreatedDateTime=2019-07-14T13:17:44 +VersionString=20190721 +CreatedDateTime=2019-07-21T18:50:59 DescriptionString=FamPlex is a collection of resources for grounding biological entities from text and describing their hierarchical relationships. QueryValueURL=http://identifiers.org/fplx/ [Author] diff --git a/export/famplex.obo b/export/famplex.obo index 8a87d7777..9aba29ba7 100644 --- a/export/famplex.obo +++ b/export/famplex.obo @@ -1,40 +1,59 @@ format-version: 1.2 -date: 14:07:2019 13:17 +date: 21:07:2019 18:51 + +[Typedef] +id: part_of +name: part of +namespace: external +xref: BFO:0000050 +is_transitive: true + +[Typedef] +id: inverse_is_a +name: inverse is_a + +[Typedef] +id: has_part +name: has part + +[Term] +id: FPLX:000000 +name: famplex [Term] -id: FPLX:9_1_1 +id: FPLX:000001 name: 9-1-1 synonym: "(9-1-1) complex" EXACT [] synonym: "9-1-1 complex" EXACT [] synonym: "9-1-1" EXACT [] synonym: "h9-1-1 complex" EXACT [] xref: BEL:"9-1-1 Complex" -is_a: FPLX:root -has_part: HGNC:HUS1 -has_part: HGNC:RAD1 -has_part: HGNC:RAD9A +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:5309 ! HUS1 +relationship: has_part HGNC:9806 ! RAD1 +relationship: has_part HGNC:9827 ! RAD9A [Term] -id: FPLX:A4GALT_family +id: FPLX:000002 name: A4GALT-family -is_a: FPLX:Glycosyltransferase -inverse_is_a: HGNC:A4GALT -inverse_is_a: HGNC:A4GNT +is_a: FPLX:000198 ! Glycosyltransferase +relationship: inverse_is_a HGNC:18149 ! A4GALT +relationship: inverse_is_a HGNC:17968 ! A4GNT [Term] -id: FPLX:ABL_family +id: FPLX:000003 name: ABL-family synonym: "ABL family" EXACT [] synonym: "ABL" EXACT [] xref: IP:IPR015015 xref: MEDSCAN:urn:agi-aopfc:0000567 xref: RE:R-HSA-376002 -is_a: FPLX:root -inverse_is_a: HGNC:ABL1 -inverse_is_a: HGNC:ABL2 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:76 ! ABL1 +relationship: inverse_is_a HGNC:77 ! ABL2 [Term] -id: FPLX:ACAD +id: FPLX:000004 name: ACAD synonym: "ACAD" EXACT [] synonym: "acyl CoA dehydrogenase" EXACT [] @@ -42,21 +61,21 @@ synonym: "acyl-CoA dehydrogenase" EXACT [] xref: BEL:"ACAD Family" xref: ECCODE:1.3.8.7 xref: NEXTPROT-FAMILY:00093 -is_a: FPLX:root -inverse_is_a: HGNC:ACAD8 -inverse_is_a: HGNC:ACAD9 -inverse_is_a: HGNC:ACADL -inverse_is_a: HGNC:ACADM -inverse_is_a: HGNC:ACADS -inverse_is_a: HGNC:ACADVL -inverse_is_a: HGNC:ACAD10 -inverse_is_a: HGNC:ACAD11 -inverse_is_a: HGNC:ACADSB -inverse_is_a: HGNC:GCDH -inverse_is_a: HGNC:IVD - -[Term] -id: FPLX:ACC +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:87 ! ACAD8 +relationship: inverse_is_a HGNC:21497 ! ACAD9 +relationship: inverse_is_a HGNC:88 ! ACADL +relationship: inverse_is_a HGNC:89 ! ACADM +relationship: inverse_is_a HGNC:90 ! ACADS +relationship: inverse_is_a HGNC:92 ! ACADVL +relationship: inverse_is_a HGNC:21597 ! ACAD10 +relationship: inverse_is_a HGNC:30211 ! ACAD11 +relationship: inverse_is_a HGNC:91 ! ACADSB +relationship: inverse_is_a HGNC:4189 ! GCDH +relationship: inverse_is_a HGNC:6186 ! IVD + +[Term] +id: FPLX:000005 name: ACC synonym: "ACC" EXACT [] synonym: "ACCs" EXACT [] @@ -67,12 +86,12 @@ xref: BEL:"Acetyl CoA Carboxylase Complex" xref: ECCODE:6.4.1.2 xref: IP:IPR013537 xref: RE:R-HSA-200563 -is_a: FPLX:root -has_part: HGNC:ACACA -has_part: HGNC:ACACB +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:84 ! ACACA +relationship: has_part HGNC:85 ! ACACB [Term] -id: FPLX:Acetyl_CoA_synthetase +id: FPLX:000006 name: Acetyl-CoA-synthetase synonym: "Acetate-CoA ligase" EXACT [] synonym: "acetyl CoA ligase" EXACT [] @@ -82,43 +101,43 @@ synonym: "acetyl-CoA synthetase" EXACT [] synonym: "acetyl-coenzyme A synthase" EXACT [] synonym: "ACS" EXACT [] xref: BEL:"Acetyl-CoA Synthetase Family" -is_a: FPLX:root -inverse_is_a: HGNC:SLC27A2 -inverse_is_a: HGNC:ACSL1 -inverse_is_a: HGNC:ACSL3 -inverse_is_a: HGNC:ACSL4 -inverse_is_a: HGNC:ACSL5 -inverse_is_a: HGNC:ACSL6 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:10996 ! SLC27A2 +relationship: inverse_is_a HGNC:3569 ! ACSL1 +relationship: inverse_is_a HGNC:3570 ! ACSL3 +relationship: inverse_is_a HGNC:3571 ! ACSL4 +relationship: inverse_is_a HGNC:16526 ! ACSL5 +relationship: inverse_is_a HGNC:16496 ! ACSL6 [Term] -id: FPLX:ACOX +id: FPLX:000007 name: ACOX synonym: "Acyl-CoA Oxidase" EXACT [] synonym: "acyl-CoA oxidases" EXACT [] xref: BEL:"ACOX Family" xref: IP:IPR002655 xref: XFAM:PF01756 -is_a: FPLX:root -inverse_is_a: HGNC:ACOX1 -inverse_is_a: HGNC:ACOX2 -inverse_is_a: HGNC:ACOX3 -inverse_is_a: HGNC:ACOXL +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:119 ! ACOX1 +relationship: inverse_is_a HGNC:120 ! ACOX2 +relationship: inverse_is_a HGNC:121 ! ACOX3 +relationship: inverse_is_a HGNC:25621 ! ACOXL [Term] -id: FPLX:ACSL +id: FPLX:000008 name: ACSL synonym: "Acsl" EXACT [] synonym: "long-chain acyl-CoA synthetase" EXACT [] xref: BEL:"ACSL Family" -is_a: FPLX:root -inverse_is_a: HGNC:ACSL1 -inverse_is_a: HGNC:ACSL3 -inverse_is_a: HGNC:ACSL4 -inverse_is_a: HGNC:ACSL5 -inverse_is_a: HGNC:ACSL6 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:3569 ! ACSL1 +relationship: inverse_is_a HGNC:3570 ! ACSL3 +relationship: inverse_is_a HGNC:3571 ! ACSL4 +relationship: inverse_is_a HGNC:16526 ! ACSL5 +relationship: inverse_is_a HGNC:16496 ! ACSL6 [Term] -id: FPLX:Actin +id: FPLX:000009 name: Actin synonym: "actin filament" EXACT [] synonym: "actin" EXACT [] @@ -131,17 +150,17 @@ xref: MESH:D000199 xref: NCIT:C16258 xref: NEXTPROT-FAMILY:00078 xref: XFAM:PF00022 -is_a: FPLX:root -inverse_is_a: HGNC:ACTA1 -inverse_is_a: HGNC:ACTA2 -inverse_is_a: HGNC:ACTB -inverse_is_a: HGNC:ACTC1 -inverse_is_a: HGNC:ACTG1 -inverse_is_a: HGNC:ACTG2 -inverse_is_a: FPLX:F_actin +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:129 ! ACTA1 +relationship: inverse_is_a HGNC:130 ! ACTA2 +relationship: inverse_is_a HGNC:132 ! ACTB +relationship: inverse_is_a HGNC:143 ! ACTC1 +relationship: inverse_is_a HGNC:144 ! ACTG1 +relationship: inverse_is_a HGNC:145 ! ACTG2 +relationship: inverse_is_a FPLX:000178 ! F_actin [Term] -id: FPLX:Activin +id: FPLX:000010 name: Activin synonym: "activin protein" EXACT [] synonym: "Activin" EXACT [] @@ -152,13 +171,13 @@ xref: NCIT:C20456 xref: RE:R-HSA-2470478 xref: RE:R-HSA-2470491 xref: RE:R-HSA-2470494 -is_a: FPLX:root -inverse_is_a: FPLX:Activin_A -inverse_is_a: FPLX:Activin_AB -inverse_is_a: FPLX:Activin_B +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a FPLX:000011 ! Activin_A +relationship: inverse_is_a FPLX:000012 ! Activin_AB +relationship: inverse_is_a FPLX:000013 ! Activin_B [Term] -id: FPLX:Activin_A +id: FPLX:000011 name: Activin-A synonym: "Activin A protein" EXACT [] synonym: "Activin A" EXACT [] @@ -168,44 +187,44 @@ synonym: "activinA" EXACT [] xref: GO:0043509 xref: IP:IPR000491 xref: RE:R-HSA-206893 -is_a: FPLX:Activin -has_part: HGNC:INHBA +is_a: FPLX:000010 ! Activin +relationship: has_part HGNC:6066 ! INHBA [Term] -id: FPLX:Activin_AB +id: FPLX:000012 name: Activin-AB synonym: "activin AB" EXACT [] xref: RE:R-HSA-1449698 xref: RE:R-HSA-2470478 xref: RE:R-HSA-2470491 xref: RE:R-HSA-2470494 -is_a: FPLX:Activin -has_part: HGNC:INHBA -has_part: HGNC:INHBB +is_a: FPLX:000010 ! Activin +relationship: has_part HGNC:6066 ! INHBA +relationship: has_part HGNC:6067 ! INHBB [Term] -id: FPLX:Activin_B +id: FPLX:000013 name: Activin-B synonym: "activin-B" EXACT [] xref: IP:IPR000381 xref: RE:R-HSA-1449672 -is_a: FPLX:Activin -has_part: HGNC:INHBB +is_a: FPLX:000010 ! Activin +relationship: has_part HGNC:6067 ! INHBB [Term] -id: FPLX:ACTN +id: FPLX:000014 name: ACTN synonym: "actinin" EXACT [] xref: BEL:"ACTN Family" xref: RE:R-HSA-451402 -is_a: FPLX:root -inverse_is_a: HGNC:ACTN1 -inverse_is_a: HGNC:ACTN2 -inverse_is_a: HGNC:ACTN3 -inverse_is_a: HGNC:ACTN4 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:163 ! ACTN1 +relationship: inverse_is_a HGNC:164 ! ACTN2 +relationship: inverse_is_a HGNC:165 ! ACTN3 +relationship: inverse_is_a HGNC:166 ! ACTN4 [Term] -id: FPLX:Adaptor_protein_II +id: FPLX:000015 name: Adaptor-protein-II synonym: "Adaptor Protein 2 complex" EXACT [] synonym: "adaptor protein complex 2" EXACT [] @@ -218,27 +237,27 @@ synonym: "AP2 complex" EXACT [] synonym: "AP2" EXACT [] xref: BEL:"Adaptor Protein II Complex" xref: GO:0030122 -is_a: FPLX:root -has_part: HGNC:AP2B1 -has_part: HGNC:AP2M1 -has_part: HGNC:AP2S1 -has_part: FPLX:AP2A +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:563 ! AP2B1 +relationship: has_part HGNC:564 ! AP2M1 +relationship: has_part HGNC:565 ! AP2S1 +relationship: has_part FPLX:000049 ! AP2A [Term] -id: FPLX:Adaptor_protein_III +id: FPLX:000016 name: Adaptor-protein-III synonym: "adaptor protein complex 3" EXACT [] synonym: "AP-3" EXACT [] synonym: "AP3" EXACT [] xref: BEL:"Adaptor Protein III Complex" -is_a: FPLX:root -has_part: HGNC:AP3B1 -has_part: HGNC:AP3D1 -has_part: HGNC:AP3S1 -has_part: HGNC:AP3S2 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:566 ! AP3B1 +relationship: has_part HGNC:568 ! AP3D1 +relationship: has_part HGNC:2013 ! AP3S1 +relationship: has_part HGNC:571 ! AP3S2 [Term] -id: FPLX:ADCY +id: FPLX:000017 name: ADCY synonym: "adenylate cyclase" EXACT [] synonym: "adenylyl cyclase" EXACT [] @@ -246,38 +265,38 @@ xref: BEL:"ADCY Family" xref: NCIT:C16264 xref: RE:R-HSA-5610577 xref: RE:R-HSA-5610578 -is_a: FPLX:root -inverse_is_a: HGNC:ADCY1 -inverse_is_a: HGNC:ADCY2 -inverse_is_a: HGNC:ADCY3 -inverse_is_a: HGNC:ADCY4 -inverse_is_a: HGNC:ADCY5 -inverse_is_a: HGNC:ADCY6 -inverse_is_a: HGNC:ADCY7 -inverse_is_a: HGNC:ADCY8 -inverse_is_a: HGNC:ADCY9 -inverse_is_a: HGNC:ADCY10 - -[Term] -id: FPLX:ADH +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:232 ! ADCY1 +relationship: inverse_is_a HGNC:233 ! ADCY2 +relationship: inverse_is_a HGNC:234 ! ADCY3 +relationship: inverse_is_a HGNC:235 ! ADCY4 +relationship: inverse_is_a HGNC:236 ! ADCY5 +relationship: inverse_is_a HGNC:237 ! ADCY6 +relationship: inverse_is_a HGNC:238 ! ADCY7 +relationship: inverse_is_a HGNC:239 ! ADCY8 +relationship: inverse_is_a HGNC:240 ! ADCY9 +relationship: inverse_is_a HGNC:21285 ! ADCY10 + +[Term] +id: FPLX:000018 name: ADH synonym: "alcohol dehydrogenase" EXACT [] xref: BEL:"ADH Family" xref: ECCODE:1.1.1.1 xref: NCIT:C16272 xref: XFAM:PF00465 -is_a: FPLX:root -inverse_is_a: HGNC:ADH1A -inverse_is_a: HGNC:ADH1B -inverse_is_a: HGNC:ADH1C -inverse_is_a: HGNC:ADH4 -inverse_is_a: HGNC:ADH5 -inverse_is_a: HGNC:ADH6 -inverse_is_a: HGNC:ADH7 -inverse_is_a: HGNC:ADHFE1 - -[Term] -id: FPLX:ADRA +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:249 ! ADH1A +relationship: inverse_is_a HGNC:250 ! ADH1B +relationship: inverse_is_a HGNC:251 ! ADH1C +relationship: inverse_is_a HGNC:252 ! ADH4 +relationship: inverse_is_a HGNC:253 ! ADH5 +relationship: inverse_is_a HGNC:255 ! ADH6 +relationship: inverse_is_a HGNC:256 ! ADH7 +relationship: inverse_is_a HGNC:16354 ! ADHFE1 + +[Term] +id: FPLX:000019 name: ADRA synonym: "a-adrenoreceptor" EXACT [] synonym: "alpha adrenoceptor" EXACT [] @@ -291,16 +310,16 @@ synonym: "α-adrenoreceptors" EXACT [] xref: BEL:"ADRA Family" xref: GO:0004936 xref: GO:0004937 -is_a: FPLX:root -inverse_is_a: HGNC:ADRA1A -inverse_is_a: HGNC:ADRA1B -inverse_is_a: HGNC:ADRA1D -inverse_is_a: HGNC:ADRA2A -inverse_is_a: HGNC:ADRA2B -inverse_is_a: HGNC:ADRA2C +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:277 ! ADRA1A +relationship: inverse_is_a HGNC:278 ! ADRA1B +relationship: inverse_is_a HGNC:280 ! ADRA1D +relationship: inverse_is_a HGNC:281 ! ADRA2A +relationship: inverse_is_a HGNC:282 ! ADRA2B +relationship: inverse_is_a HGNC:283 ! ADRA2C [Term] -id: FPLX:ADRA2 +id: FPLX:000020 name: ADRA2 synonym: "alpha(2)-adrenoceptors" EXACT [] synonym: "alpha(2)-ARs" EXACT [] @@ -315,13 +334,13 @@ xref: BEL:"ADRA2 Family" xref: GO:0004938 xref: RE:R-HSA-390664 xref: RE:R-HSA-390700 -is_a: FPLX:root -inverse_is_a: HGNC:ADRA2A -inverse_is_a: HGNC:ADRA2B -inverse_is_a: HGNC:ADRA2C +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:281 ! ADRA2A +relationship: inverse_is_a HGNC:282 ! ADRA2B +relationship: inverse_is_a HGNC:283 ! ADRA2C [Term] -id: FPLX:ADRB +id: FPLX:000021 name: ADRB synonym: "b-adrenergic receptor" EXACT [] synonym: "b-receptors" EXACT [] @@ -335,13 +354,13 @@ xref: BEL:"ADRB Family" xref: NCIT:C17062 xref: RE:R-HSA-390643 xref: RE:R-HSA-390670 -is_a: FPLX:root -inverse_is_a: HGNC:ADRB1 -inverse_is_a: HGNC:ADRB2 -inverse_is_a: HGNC:ADRB3 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:285 ! ADRB1 +relationship: inverse_is_a HGNC:286 ! ADRB2 +relationship: inverse_is_a HGNC:288 ! ADRB3 [Term] -id: FPLX:ADRBK +id: FPLX:000022 name: ADRBK synonym: "BARK" EXACT [] synonym: "beta adrenergic receptor kinase" EXACT [] @@ -350,12 +369,12 @@ synonym: "β adrenergic receptor kinase" EXACT [] synonym: "βARK" EXACT [] xref: BEL:"ADRBK Family" xref: RE:R-HSA-8866229 -is_a: FPLX:GRK -inverse_is_a: HGNC:GRK2 -inverse_is_a: HGNC:GRK3 +is_a: FPLX:000192 ! GRK +relationship: inverse_is_a HGNC:289 ! GRK2 +relationship: inverse_is_a HGNC:290 ! GRK3 [Term] -id: FPLX:AKT +id: FPLX:000023 name: AKT synonym: "AKT family" EXACT [] synonym: "AKT" EXACT [] @@ -376,13 +395,13 @@ xref: RE:R-HSA-2317329 xref: RE:R-HSA-2400006 xref: RE:R-HSA-2400013 xref: SIGNOR:SIGNOR-PF24 -is_a: FPLX:root -inverse_is_a: HGNC:AKT1 -inverse_is_a: HGNC:AKT2 -inverse_is_a: HGNC:AKT3 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:391 ! AKT1 +relationship: inverse_is_a HGNC:392 ! AKT2 +relationship: inverse_is_a HGNC:393 ! AKT3 [Term] -id: FPLX:ALDH +id: FPLX:000024 name: ALDH synonym: "aldehyde dehydrogenase (NAD+)" EXACT [] synonym: "Aldehyde dehydrogenase" EXACT [] @@ -391,20 +410,20 @@ synonym: "ALDH" EXACT [] xref: BEL:"ALDH Family" xref: ECCODE:1.2.1.3 xref: NCIT:C118481 -is_a: FPLX:root -inverse_is_a: HGNC:ALDH1A1 -inverse_is_a: HGNC:ALDH1A2 -inverse_is_a: HGNC:ALDH1A3 -inverse_is_a: HGNC:ALDH2 -inverse_is_a: HGNC:ALDH3A1 -inverse_is_a: HGNC:ALDH3A2 -inverse_is_a: HGNC:ALDH3B1 -inverse_is_a: HGNC:ALDH5A1 -inverse_is_a: HGNC:ALDH7A1 -inverse_is_a: HGNC:ALDH9A1 - -[Term] -id: FPLX:ALDO +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:402 ! ALDH1A1 +relationship: inverse_is_a HGNC:15472 ! ALDH1A2 +relationship: inverse_is_a HGNC:409 ! ALDH1A3 +relationship: inverse_is_a HGNC:404 ! ALDH2 +relationship: inverse_is_a HGNC:405 ! ALDH3A1 +relationship: inverse_is_a HGNC:403 ! ALDH3A2 +relationship: inverse_is_a HGNC:410 ! ALDH3B1 +relationship: inverse_is_a HGNC:408 ! ALDH5A1 +relationship: inverse_is_a HGNC:877 ! ALDH7A1 +relationship: inverse_is_a HGNC:412 ! ALDH9A1 + +[Term] +id: FPLX:000025 name: ALDO synonym: "ALDO" EXACT [] synonym: "fructose-bisphosphate aldolase" EXACT [] @@ -413,54 +432,54 @@ xref: ECCODE:4.1.2.13 xref: IP:IPR000741 xref: IP:IPR029768 xref: RE:R-HSA-179508 -is_a: FPLX:root -inverse_is_a: HGNC:ALDOA -inverse_is_a: HGNC:ALDOB -inverse_is_a: HGNC:ALDOC +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:414 ! ALDOA +relationship: inverse_is_a HGNC:417 ! ALDOB +relationship: inverse_is_a HGNC:418 ! ALDOC [Term] -id: FPLX:ALG10 +id: FPLX:000026 name: ALG10 synonym: "ALG10" EXACT [] synonym: "Alpha-1,2-glucosyltransferase" EXACT [] synonym: "Alpha-1,2-glucosyltransferases" EXACT [] synonym: "alpha-1,2-glucosyltransferase" EXACT [] synonym: "alpha-1,2-glucosyltransferases" EXACT [] -is_a: FPLX:Glycosyltransferase -inverse_is_a: HGNC:ALG10 -inverse_is_a: HGNC:ALG10B +is_a: FPLX:000198 ! Glycosyltransferase +relationship: inverse_is_a HGNC:23162 ! ALG10 +relationship: inverse_is_a HGNC:31088 ! ALG10B [Term] -id: FPLX:ALG1_family +id: FPLX:000027 name: ALG1-family -is_a: FPLX:Glycosyltransferase -inverse_is_a: HGNC:ALG1 -inverse_is_a: HGNC:ALG1L -inverse_is_a: HGNC:ALG1L2 -inverse_is_a: HGNC:ALG2 -inverse_is_a: HGNC:ALG11 -inverse_is_a: HGNC:GLT1D1 -inverse_is_a: HGNC:GTDC1 -inverse_is_a: HGNC:GYS1 -inverse_is_a: HGNC:GYS2 -inverse_is_a: HGNC:PIGA - -[Term] -id: FPLX:ALG3_family +is_a: FPLX:000198 ! Glycosyltransferase +relationship: inverse_is_a HGNC:18294 ! ALG1 +relationship: inverse_is_a HGNC:33721 ! ALG1L +relationship: inverse_is_a HGNC:37258 ! ALG1L2 +relationship: inverse_is_a HGNC:23159 ! ALG2 +relationship: inverse_is_a HGNC:32456 ! ALG11 +relationship: inverse_is_a HGNC:26483 ! GLT1D1 +relationship: inverse_is_a HGNC:20887 ! GTDC1 +relationship: inverse_is_a HGNC:4706 ! GYS1 +relationship: inverse_is_a HGNC:4707 ! GYS2 +relationship: inverse_is_a HGNC:8957 ! PIGA + +[Term] +id: FPLX:000028 name: ALG3-family -is_a: FPLX:Glycosyltransferase -inverse_is_a: HGNC:ALG3 -inverse_is_a: HGNC:ALG9 -inverse_is_a: HGNC:ALG12 -inverse_is_a: HGNC:PIGB -inverse_is_a: HGNC:PIGM -inverse_is_a: HGNC:PIGV -inverse_is_a: HGNC:PIGZ -inverse_is_a: HGNC:POMT1 -inverse_is_a: HGNC:POMT2 - -[Term] -id: FPLX:ALG6_family +is_a: FPLX:000198 ! Glycosyltransferase +relationship: inverse_is_a HGNC:23056 ! ALG3 +relationship: inverse_is_a HGNC:15672 ! ALG9 +relationship: inverse_is_a HGNC:19358 ! ALG12 +relationship: inverse_is_a HGNC:8959 ! PIGB +relationship: inverse_is_a HGNC:18858 ! PIGM +relationship: inverse_is_a HGNC:26031 ! PIGV +relationship: inverse_is_a HGNC:30596 ! PIGZ +relationship: inverse_is_a HGNC:9202 ! POMT1 +relationship: inverse_is_a HGNC:19743 ! POMT2 + +[Term] +id: FPLX:000029 name: ALG6-family synonym: "Alpha-1,3-glucosyltransferase" EXACT [] synonym: "Alpha-1,3-glucosyltransferases" EXACT [] @@ -470,19 +489,19 @@ synonym: "Alpha-1,4-glucosyltransferase" EXACT [] synonym: "Alpha-1,4-glucosyltransferases" EXACT [] synonym: "alpha-1,4-glucosyltransferase" EXACT [] synonym: "alpha-1,4-glucosyltransferases" EXACT [] -is_a: FPLX:Glycosyltransferase -inverse_is_a: HGNC:ALG6 -inverse_is_a: HGNC:ALG8 +is_a: FPLX:000198 ! Glycosyltransferase +relationship: inverse_is_a HGNC:23157 ! ALG6 +relationship: inverse_is_a HGNC:23161 ! ALG8 [Term] -id: FPLX:ALG13_family +id: FPLX:000030 name: ALG13-family -is_a: FPLX:Glycosyltransferase -inverse_is_a: HGNC:ALG13 -inverse_is_a: HGNC:ALG14 +is_a: FPLX:000198 ! Glycosyltransferase +relationship: inverse_is_a HGNC:30881 ! ALG13 +relationship: inverse_is_a HGNC:28287 ! ALG14 [Term] -id: FPLX:AMPK +id: FPLX:000031 name: AMPK synonym: "AMPK" EXACT [] xref: BEL:"AMP Activated Protein Kinase Complex" @@ -494,25 +513,25 @@ xref: RE:R-HSA-380931 xref: RE:R-HSA-380934 xref: RE:R-HSA-380961 xref: RE:R-HSA-6805467 -is_a: FPLX:root -inverse_is_a: FPLX:AMPK_A1B1G1 -inverse_is_a: FPLX:AMPK_A1B1G2 -inverse_is_a: FPLX:AMPK_A1B1G3 -inverse_is_a: FPLX:AMPK_A1B2G1 -inverse_is_a: FPLX:AMPK_A1B2G2 -inverse_is_a: FPLX:AMPK_A1B2G3 -inverse_is_a: FPLX:AMPK_A2B1G1 -inverse_is_a: FPLX:AMPK_A2B1G2 -inverse_is_a: FPLX:AMPK_A2B1G3 -inverse_is_a: FPLX:AMPK_A2B2G1 -inverse_is_a: FPLX:AMPK_A2B2G2 -inverse_is_a: FPLX:AMPK_A2B2G3 -has_part: FPLX:AMPK_alpha -has_part: FPLX:AMPK_beta -has_part: FPLX:AMPK_gamma - -[Term] -id: FPLX:AMPK_A1B1G1 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a FPLX:000032 ! AMPK_A1B1G1 +relationship: inverse_is_a FPLX:000033 ! AMPK_A1B1G2 +relationship: inverse_is_a FPLX:000034 ! AMPK_A1B1G3 +relationship: inverse_is_a FPLX:000035 ! AMPK_A1B2G1 +relationship: inverse_is_a FPLX:000036 ! AMPK_A1B2G2 +relationship: inverse_is_a FPLX:000037 ! AMPK_A1B2G3 +relationship: inverse_is_a FPLX:000038 ! AMPK_A2B1G1 +relationship: inverse_is_a FPLX:000039 ! AMPK_A2B1G2 +relationship: inverse_is_a FPLX:000040 ! AMPK_A2B1G3 +relationship: inverse_is_a FPLX:000041 ! AMPK_A2B2G1 +relationship: inverse_is_a FPLX:000042 ! AMPK_A2B2G2 +relationship: inverse_is_a FPLX:000043 ! AMPK_A2B2G3 +relationship: has_part FPLX:000044 ! AMPK_alpha +relationship: has_part FPLX:000045 ! AMPK_beta +relationship: has_part FPLX:000046 ! AMPK_gamma + +[Term] +id: FPLX:000032 name: AMPK-A1B1G1 synonym: "AMPK (alpha 1, beta 1, gamma 1)" EXACT [] synonym: "AMPK (α 1, β 1, γ 1)" EXACT [] @@ -522,13 +541,13 @@ synonym: "AMPK a1b1g1" EXACT [] synonym: "AMPK alpha1beta1gamma1" EXACT [] synonym: "AMPK α1β1γ1" EXACT [] synonym: "α1β1γ1" EXACT [] -is_a: FPLX:AMPK -has_part: HGNC:PRKAA1 -has_part: HGNC:PRKAB1 -has_part: HGNC:PRKAG1 +is_a: FPLX:000031 ! AMPK +relationship: has_part HGNC:9376 ! PRKAA1 +relationship: has_part HGNC:9378 ! PRKAB1 +relationship: has_part HGNC:9385 ! PRKAG1 [Term] -id: FPLX:AMPK_A1B1G2 +id: FPLX:000033 name: AMPK-A1B1G2 synonym: "AMPK (alpha 1, beta 1, gamma 2)" EXACT [] synonym: "AMPK (α 1, β 1, γ 2)" EXACT [] @@ -538,13 +557,13 @@ synonym: "AMPK a1b1g2" EXACT [] synonym: "AMPK alpha1beta1gamma2" EXACT [] synonym: "AMPK α1β1γ2" EXACT [] synonym: "α1β1γ2" EXACT [] -is_a: FPLX:AMPK -has_part: HGNC:PRKAA1 -has_part: HGNC:PRKAB1 -has_part: HGNC:PRKAG2 +is_a: FPLX:000031 ! AMPK +relationship: has_part HGNC:9376 ! PRKAA1 +relationship: has_part HGNC:9378 ! PRKAB1 +relationship: has_part HGNC:9386 ! PRKAG2 [Term] -id: FPLX:AMPK_A1B1G3 +id: FPLX:000034 name: AMPK-A1B1G3 synonym: "AMPK (alpha 1, beta 1, gamma 3)" EXACT [] synonym: "AMPK (α 1, β 1, γ 3)" EXACT [] @@ -554,13 +573,13 @@ synonym: "AMPK a1b1g3" EXACT [] synonym: "AMPK alpha1beta1gamma3" EXACT [] synonym: "AMPK α1β1γ3" EXACT [] synonym: "α1β1γ3" EXACT [] -is_a: FPLX:AMPK -has_part: HGNC:PRKAA1 -has_part: HGNC:PRKAB1 -has_part: HGNC:PRKAG3 +is_a: FPLX:000031 ! AMPK +relationship: has_part HGNC:9376 ! PRKAA1 +relationship: has_part HGNC:9378 ! PRKAB1 +relationship: has_part HGNC:9387 ! PRKAG3 [Term] -id: FPLX:AMPK_A1B2G1 +id: FPLX:000035 name: AMPK-A1B2G1 synonym: "AMPK (alpha 1, beta 2, gamma 1)" EXACT [] synonym: "AMPK (α 1, β 2, γ 1)" EXACT [] @@ -570,13 +589,13 @@ synonym: "AMPK a1b2g1" EXACT [] synonym: "AMPK alpha1beta2gamma1" EXACT [] synonym: "AMPK α1β2γ1" EXACT [] synonym: "α1β2γ1" EXACT [] -is_a: FPLX:AMPK -has_part: HGNC:PRKAA1 -has_part: HGNC:PRKAB2 -has_part: HGNC:PRKAG1 +is_a: FPLX:000031 ! AMPK +relationship: has_part HGNC:9376 ! PRKAA1 +relationship: has_part HGNC:9379 ! PRKAB2 +relationship: has_part HGNC:9385 ! PRKAG1 [Term] -id: FPLX:AMPK_A1B2G2 +id: FPLX:000036 name: AMPK-A1B2G2 synonym: "AMPK (alpha 1, beta 2, gamma 2)" EXACT [] synonym: "AMPK (α 1, β 2, γ 2)" EXACT [] @@ -586,26 +605,26 @@ synonym: "AMPK a1b2g2" EXACT [] synonym: "AMPK alpha1beta2gamma2" EXACT [] synonym: "AMPK α1β2γ2" EXACT [] synonym: "α1β2γ2" EXACT [] -is_a: FPLX:AMPK -has_part: HGNC:PRKAA1 -has_part: HGNC:PRKAB2 -has_part: HGNC:PRKAG2 +is_a: FPLX:000031 ! AMPK +relationship: has_part HGNC:9376 ! PRKAA1 +relationship: has_part HGNC:9379 ! PRKAB2 +relationship: has_part HGNC:9386 ! PRKAG2 [Term] -id: FPLX:AMPK_A1B2G3 +id: FPLX:000037 name: AMPK-A1B2G3 synonym: "AMPK (alpha 1, beta 2, gamma 3)" EXACT [] synonym: "AMPK (α 1, β 2, γ 3)" EXACT [] synonym: "AMPK (A1/B2/G3)" EXACT [] synonym: "AMPK alpha1beta2gamma3" EXACT [] synonym: "AMPK α1β2γ3" EXACT [] -is_a: FPLX:AMPK -has_part: HGNC:PRKAA1 -has_part: HGNC:PRKAB2 -has_part: HGNC:PRKAG3 +is_a: FPLX:000031 ! AMPK +relationship: has_part HGNC:9376 ! PRKAA1 +relationship: has_part HGNC:9379 ! PRKAB2 +relationship: has_part HGNC:9387 ! PRKAG3 [Term] -id: FPLX:AMPK_A2B1G1 +id: FPLX:000038 name: AMPK-A2B1G1 synonym: "AMPK (alpha 2, beta 1, gamma 1)" EXACT [] synonym: "AMPK (α 2, β 1, γ 1)" EXACT [] @@ -615,39 +634,39 @@ synonym: "AMPK a2b1g1" EXACT [] synonym: "AMPK alpha2beta1gamma1" EXACT [] synonym: "AMPK α2β1γ1" EXACT [] synonym: "α2β1γ1" EXACT [] -is_a: FPLX:AMPK -has_part: HGNC:PRKAA2 -has_part: HGNC:PRKAB1 -has_part: HGNC:PRKAG1 +is_a: FPLX:000031 ! AMPK +relationship: has_part HGNC:9377 ! PRKAA2 +relationship: has_part HGNC:9378 ! PRKAB1 +relationship: has_part HGNC:9385 ! PRKAG1 [Term] -id: FPLX:AMPK_A2B1G2 +id: FPLX:000039 name: AMPK-A2B1G2 synonym: "AMPK (alpha 2, beta 1, gamma 2)" EXACT [] synonym: "AMPK (α 2, β 1, γ 2)" EXACT [] synonym: "AMPK (A2/B1/G2)" EXACT [] synonym: "AMPK alpha2beta1gamma2" EXACT [] synonym: "AMPK α2β1γ2" EXACT [] -is_a: FPLX:AMPK -has_part: HGNC:PRKAA2 -has_part: HGNC:PRKAB1 -has_part: HGNC:PRKAG2 +is_a: FPLX:000031 ! AMPK +relationship: has_part HGNC:9377 ! PRKAA2 +relationship: has_part HGNC:9378 ! PRKAB1 +relationship: has_part HGNC:9386 ! PRKAG2 [Term] -id: FPLX:AMPK_A2B1G3 +id: FPLX:000040 name: AMPK-A2B1G3 synonym: "AMPK (alpha 2, beta 1, gamma 3)" EXACT [] synonym: "AMPK (α 2, β 1, γ 3)" EXACT [] synonym: "AMPK (A2/B1/G3)" EXACT [] synonym: "AMPK alpha2beta1gamma3" EXACT [] synonym: "AMPK α2β1γ3" EXACT [] -is_a: FPLX:AMPK -has_part: HGNC:PRKAA2 -has_part: HGNC:PRKAB1 -has_part: HGNC:PRKAG3 +is_a: FPLX:000031 ! AMPK +relationship: has_part HGNC:9377 ! PRKAA2 +relationship: has_part HGNC:9378 ! PRKAB1 +relationship: has_part HGNC:9387 ! PRKAG3 [Term] -id: FPLX:AMPK_A2B2G1 +id: FPLX:000041 name: AMPK-A2B2G1 synonym: "AMPK (alpha 2, beta 2, gamma 1)" EXACT [] synonym: "AMPK (α 2, β 2, γ 1)" EXACT [] @@ -657,13 +676,13 @@ synonym: "AMPK a2b2g1" EXACT [] synonym: "AMPK alpha2beta2gamma1" EXACT [] synonym: "AMPK α2β2γ1" EXACT [] synonym: "α2β2γ1" EXACT [] -is_a: FPLX:AMPK -has_part: HGNC:PRKAA2 -has_part: HGNC:PRKAB2 -has_part: HGNC:PRKAG1 +is_a: FPLX:000031 ! AMPK +relationship: has_part HGNC:9377 ! PRKAA2 +relationship: has_part HGNC:9379 ! PRKAB2 +relationship: has_part HGNC:9385 ! PRKAG1 [Term] -id: FPLX:AMPK_A2B2G2 +id: FPLX:000042 name: AMPK-A2B2G2 synonym: "AMPK (alpha 2, beta 2, gamma 2)" EXACT [] synonym: "AMPK (α 2, β 2, γ 2)" EXACT [] @@ -677,13 +696,13 @@ xref: RE:R-HSA-163679 xref: RE:R-HSA-163736 xref: RE:R-HSA-163747 xref: RE:R-HSA-200408 -is_a: FPLX:AMPK -has_part: HGNC:PRKAA2 -has_part: HGNC:PRKAB2 -has_part: HGNC:PRKAG2 +is_a: FPLX:000031 ! AMPK +relationship: has_part HGNC:9377 ! PRKAA2 +relationship: has_part HGNC:9379 ! PRKAB2 +relationship: has_part HGNC:9386 ! PRKAG2 [Term] -id: FPLX:AMPK_A2B2G3 +id: FPLX:000043 name: AMPK-A2B2G3 synonym: "AMPK (alpha 2, beta 2, gamma 3)" EXACT [] synonym: "AMPK (α 2, β 2, γ 3)" EXACT [] @@ -693,13 +712,13 @@ synonym: "AMPK a2b2g3" EXACT [] synonym: "AMPK alpha2beta2gamma3" EXACT [] synonym: "AMPK α2β2γ3" EXACT [] synonym: "α2β2γ3" EXACT [] -is_a: FPLX:AMPK -has_part: HGNC:PRKAA2 -has_part: HGNC:PRKAB2 -has_part: HGNC:PRKAG3 +is_a: FPLX:000031 ! AMPK +relationship: has_part HGNC:9377 ! PRKAA2 +relationship: has_part HGNC:9379 ! PRKAB2 +relationship: has_part HGNC:9387 ! PRKAG3 [Term] -id: FPLX:AMPK_alpha +id: FPLX:000044 name: AMPK-alpha synonym: "AMPKalpha" EXACT [] synonym: "AMPKα" EXACT [] @@ -711,12 +730,12 @@ xref: RE:R-HSA-2151213 xref: RE:R-HSA-381844 xref: RE:R-HSA-381845 xref: SIGNOR:SIGNOR-PF6 -part_of: FPLX:AMPK -inverse_is_a: HGNC:PRKAA1 -inverse_is_a: HGNC:PRKAA2 +relationship: part_of FPLX:000031 ! AMPK +relationship: inverse_is_a HGNC:9376 ! PRKAA1 +relationship: inverse_is_a HGNC:9377 ! PRKAA2 [Term] -id: FPLX:AMPK_beta +id: FPLX:000045 name: AMPK-beta synonym: "PRKAB" EXACT [] xref: BEL:"PRKAB Family" @@ -724,25 +743,25 @@ xref: IP:IPR006828 xref: IP:IPR032640 xref: RE:R-HSA-2151208 xref: RE:R-HSA-381854 -part_of: FPLX:AMPK -inverse_is_a: HGNC:PRKAB1 -inverse_is_a: HGNC:PRKAB2 +relationship: part_of FPLX:000031 ! AMPK +relationship: inverse_is_a HGNC:9378 ! PRKAB1 +relationship: inverse_is_a HGNC:9379 ! PRKAB2 [Term] -id: FPLX:AMPK_gamma +id: FPLX:000046 name: AMPK-gamma synonym: "PRKAG" EXACT [] xref: BEL:"PRKAG Family" xref: RE:R-HSA-2151212 xref: RE:R-HSA-2316451 xref: RE:R-HSA-381851 -part_of: FPLX:AMPK -inverse_is_a: HGNC:PRKAG1 -inverse_is_a: HGNC:PRKAG2 -inverse_is_a: HGNC:PRKAG3 +relationship: part_of FPLX:000031 ! AMPK +relationship: inverse_is_a HGNC:9385 ! PRKAG1 +relationship: inverse_is_a HGNC:9386 ! PRKAG2 +relationship: inverse_is_a HGNC:9387 ! PRKAG3 [Term] -id: FPLX:Annexin_II_heterotetramer +id: FPLX:000047 name: Annexin-II-heterotetramer synonym: "A2t" EXACT [] synonym: "annexin A2 heterotetramer" EXACT [] @@ -750,55 +769,55 @@ synonym: "annexin II heterotetramer" EXACT [] synonym: "ANXA2 heterotetramer" EXACT [] xref: BEL:"Annexin II Heterotetramer Complex" xref: RE:R-HSA-5336141 -is_a: FPLX:root -has_part: HGNC:ANXA2 -has_part: HGNC:S100A10 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:537 ! ANXA2 +relationship: has_part HGNC:10487 ! S100A10 [Term] -id: FPLX:AP1 +id: FPLX:000048 name: AP1 synonym: "AP-1" EXACT [] synonym: "AP1" EXACT [] xref: BEL:"AP-1 Complex" xref: MESH:D018808 xref: NCIT:C17450 -is_a: FPLX:root -has_part: FPLX:FOS_family -has_part: FPLX:JUN_family +is_a: FPLX:000000 ! famplex +relationship: has_part FPLX:000173 ! FOS_family +relationship: has_part FPLX:000268 ! JUN_family [Term] -id: FPLX:AP2A +id: FPLX:000049 name: AP2A xref: IP:IPR017104 -part_of: FPLX:Adaptor_protein_II -inverse_is_a: HGNC:AP2A1 -inverse_is_a: HGNC:AP2A2 +relationship: part_of FPLX:000015 ! Adaptor_protein_II +relationship: inverse_is_a HGNC:561 ! AP2A1 +relationship: inverse_is_a HGNC:562 ! AP2A2 [Term] -id: FPLX:APC_C +id: FPLX:000050 name: APC-C synonym: "APC/C" EXACT [] xref: GO:0005680 xref: MEDSCAN:urn:agi-aopfc:0000571 xref: MEDSCAN:urn:agi-complex:prophash-dd63d0a558770b12c9149b4955828f35 -is_a: FPLX:root -has_part: HGNC:ANAPC2 -has_part: HGNC:ANAPC11 -has_part: HGNC:ANAPC1 -has_part: HGNC:CDC16 -has_part: HGNC:CDC27 -has_part: HGNC:CDC23 -has_part: HGNC:ANAPC5 -has_part: HGNC:ANAPC10 -has_part: HGNC:ANAPC15 -has_part: HGNC:ANAPC13 -has_part: HGNC:CDC26 -has_part: HGNC:ANAPC16 -has_part: HGNC:ANAPC7 -has_part: HGNC:ANAPC4 - -[Term] -id: FPLX:APOA +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:19989 ! ANAPC2 +relationship: has_part HGNC:14452 ! ANAPC11 +relationship: has_part HGNC:19988 ! ANAPC1 +relationship: has_part HGNC:1720 ! CDC16 +relationship: has_part HGNC:1728 ! CDC27 +relationship: has_part HGNC:1724 ! CDC23 +relationship: has_part HGNC:15713 ! ANAPC5 +relationship: has_part HGNC:24077 ! ANAPC10 +relationship: has_part HGNC:24531 ! ANAPC15 +relationship: has_part HGNC:24540 ! ANAPC13 +relationship: has_part HGNC:17839 ! CDC26 +relationship: has_part HGNC:26976 ! ANAPC16 +relationship: has_part HGNC:17380 ! ANAPC7 +relationship: has_part HGNC:19990 ! ANAPC4 + +[Term] +id: FPLX:000051 name: APOA synonym: "ApoA" EXACT [] synonym: "apoA" EXACT [] @@ -808,14 +827,14 @@ synonym: "apolipoprotein(A)" EXACT [] synonym: "apolipoprotein(a)" EXACT [] xref: BEL:"APOA Family" xref: NCIT:C105952 -is_a: FPLX:Apolipoprotein -inverse_is_a: HGNC:APOA1 -inverse_is_a: HGNC:APOA2 -inverse_is_a: HGNC:APOA4 -inverse_is_a: HGNC:APOA5 +is_a: FPLX:000052 ! Apolipoprotein +relationship: inverse_is_a HGNC:600 ! APOA1 +relationship: inverse_is_a HGNC:601 ! APOA2 +relationship: inverse_is_a HGNC:602 ! APOA4 +relationship: inverse_is_a HGNC:17288 ! APOA5 [Term] -id: FPLX:Apolipoprotein +id: FPLX:000052 name: Apolipoprotein synonym: "Apolipoprotein" EXACT [] synonym: "apolipoprotein" EXACT [] @@ -823,87 +842,87 @@ synonym: "apolipoproteins" EXACT [] xref: IP:IPR000074 xref: MEDSCAN:urn:agi-protfc:apolipoprotein xref: XFAM:PF01442 -is_a: FPLX:root -inverse_is_a: FPLX:APOA -inverse_is_a: HGNC:APOE +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a FPLX:000051 ! APOA +relationship: inverse_is_a HGNC:613 ! APOE [Term] -id: FPLX:ARF_GTPase_family +id: FPLX:000053 name: ARF-GTPase-family synonym: "ADP ribosylation factor" EXACT [] synonym: "ARF" EXACT [] -is_a: FPLX:root -inverse_is_a: HGNC:TRIM23 -inverse_is_a: HGNC:ARF1 -inverse_is_a: HGNC:ARF3 -inverse_is_a: HGNC:ARF4 -inverse_is_a: HGNC:ARF5 -inverse_is_a: HGNC:ARF6 -inverse_is_a: HGNC:ARL1 -inverse_is_a: HGNC:ARL2 -inverse_is_a: HGNC:ARL3 -inverse_is_a: HGNC:ARL4A -inverse_is_a: HGNC:ARL4C -inverse_is_a: HGNC:ARL4D -inverse_is_a: HGNC:ARL5A -inverse_is_a: HGNC:ARL5B -inverse_is_a: HGNC:ARL5C -inverse_is_a: HGNC:ARL6 -inverse_is_a: HGNC:ARL8A -inverse_is_a: HGNC:ARL8B -inverse_is_a: HGNC:ARL9 -inverse_is_a: HGNC:ARL10 -inverse_is_a: HGNC:ARL11 -inverse_is_a: HGNC:ARL13A -inverse_is_a: HGNC:ARL13B -inverse_is_a: HGNC:ARL14 -inverse_is_a: HGNC:ARL15 -inverse_is_a: HGNC:ARL16 -inverse_is_a: HGNC:ARL17A -inverse_is_a: HGNC:ARL17B -inverse_is_a: HGNC:ARFRP1 -inverse_is_a: HGNC:SAR1A -inverse_is_a: HGNC:SAR1B - -[Term] -id: FPLX:Arp2_3_protein +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:660 ! TRIM23 +relationship: inverse_is_a HGNC:652 ! ARF1 +relationship: inverse_is_a HGNC:654 ! ARF3 +relationship: inverse_is_a HGNC:655 ! ARF4 +relationship: inverse_is_a HGNC:658 ! ARF5 +relationship: inverse_is_a HGNC:659 ! ARF6 +relationship: inverse_is_a HGNC:692 ! ARL1 +relationship: inverse_is_a HGNC:693 ! ARL2 +relationship: inverse_is_a HGNC:694 ! ARL3 +relationship: inverse_is_a HGNC:695 ! ARL4A +relationship: inverse_is_a HGNC:698 ! ARL4C +relationship: inverse_is_a HGNC:656 ! ARL4D +relationship: inverse_is_a HGNC:696 ! ARL5A +relationship: inverse_is_a HGNC:23052 ! ARL5B +relationship: inverse_is_a HGNC:31111 ! ARL5C +relationship: inverse_is_a HGNC:13210 ! ARL6 +relationship: inverse_is_a HGNC:25192 ! ARL8A +relationship: inverse_is_a HGNC:25564 ! ARL8B +relationship: inverse_is_a HGNC:23592 ! ARL9 +relationship: inverse_is_a HGNC:22042 ! ARL10 +relationship: inverse_is_a HGNC:24046 ! ARL11 +relationship: inverse_is_a HGNC:31709 ! ARL13A +relationship: inverse_is_a HGNC:25419 ! ARL13B +relationship: inverse_is_a HGNC:22974 ! ARL14 +relationship: inverse_is_a HGNC:25945 ! ARL15 +relationship: inverse_is_a HGNC:27902 ! ARL16 +relationship: inverse_is_a HGNC:24096 ! ARL17A +relationship: inverse_is_a HGNC:32387 ! ARL17B +relationship: inverse_is_a HGNC:662 ! ARFRP1 +relationship: inverse_is_a HGNC:10534 ! SAR1A +relationship: inverse_is_a HGNC:10535 ! SAR1B + +[Term] +id: FPLX:000054 name: Arp2-3-protein synonym: "Arp2/3" EXACT [] xref: BEL:"Arp2/3 Protein Complex" -is_a: FPLX:root -has_part: HGNC:ARPC1A -has_part: HGNC:ARPC1B -has_part: HGNC:ARPC2 -has_part: HGNC:ARPC3 -has_part: HGNC:ARPC4 -has_part: HGNC:ARPC5 -has_part: HGNC:ARPC5L +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:703 ! ARPC1A +relationship: has_part HGNC:704 ! ARPC1B +relationship: has_part HGNC:705 ! ARPC2 +relationship: has_part HGNC:706 ! ARPC3 +relationship: has_part HGNC:707 ! ARPC4 +relationship: has_part HGNC:708 ! ARPC5 +relationship: has_part HGNC:23366 ! ARPC5L [Term] -id: FPLX:ARRB +id: FPLX:000055 name: ARRB synonym: "b-arrestin" EXACT [] synonym: "barrestins" EXACT [] xref: BEL:"ARRB Family" xref: RE:R-HSA-1911410 -is_a: FPLX:root -inverse_is_a: HGNC:ARRB1 -inverse_is_a: HGNC:ARRB2 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:711 ! ARRB1 +relationship: inverse_is_a HGNC:712 ! ARRB2 [Term] -id: FPLX:ATG4 +id: FPLX:000056 name: ATG4 synonym: "ATG4" EXACT [] synonym: "Atg4" EXACT [] xref: RE:R-HSA-5682664 -is_a: FPLX:root -inverse_is_a: HGNC:ATG4A -inverse_is_a: HGNC:ATG4B -inverse_is_a: HGNC:ATG4C -inverse_is_a: HGNC:ATG4D +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:16489 ! ATG4A +relationship: inverse_is_a HGNC:20790 ! ATG4B +relationship: inverse_is_a HGNC:16040 ! ATG4C +relationship: inverse_is_a HGNC:20789 ! ATG4D [Term] -id: FPLX:ATP1A +id: FPLX:000057 name: ATP1A synonym: "ATP1A" EXACT [] synonym: "ATPase Na+/K+ transporting subunit alpha" EXACT [] @@ -913,64 +932,64 @@ synonym: "ATPase Na+/K+ transporting subunit β" EXACT [] synonym: "Na/K ATPase alpha" EXACT [] synonym: "Na/K ATPase α" EXACT [] xref: RE:R-HSA-936779 -part_of: FPLX:Na_K_ATPase -inverse_is_a: HGNC:ATP1A1 -inverse_is_a: HGNC:ATP1A2 -inverse_is_a: HGNC:ATP1A3 -inverse_is_a: HGNC:ATP1A4 +relationship: part_of FPLX:000303 ! Na_K_ATPase +relationship: inverse_is_a HGNC:799 ! ATP1A1 +relationship: inverse_is_a HGNC:800 ! ATP1A2 +relationship: inverse_is_a HGNC:801 ! ATP1A3 +relationship: inverse_is_a HGNC:14073 ! ATP1A4 [Term] -id: FPLX:ATP1B +id: FPLX:000058 name: ATP1B synonym: "Na,K-ATPase beta subunit" EXACT [] synonym: "Na,K-ATPase β subunit" EXACT [] synonym: "ATP1B" EXACT [] xref: RE:R-HSA-936820 -part_of: FPLX:Na_K_ATPase -inverse_is_a: HGNC:ATP1B1 -inverse_is_a: HGNC:ATP1B2 -inverse_is_a: HGNC:ATP1B3 -inverse_is_a: HGNC:ATP1B4 +relationship: part_of FPLX:000303 ! Na_K_ATPase +relationship: inverse_is_a HGNC:804 ! ATP1B1 +relationship: inverse_is_a HGNC:805 ! ATP1B2 +relationship: inverse_is_a HGNC:806 ! ATP1B3 +relationship: inverse_is_a HGNC:808 ! ATP1B4 [Term] -id: FPLX:ATP5G +id: FPLX:000059 name: ATP5G synonym: "ATP synthase H + transporting mitochondrial F0 complex subunit G" EXACT [] xref: BEL:"ATP5G Family" xref: IP:IPR000454 xref: IP:IPR020537 -part_of: FPLX:ATP_synthase -inverse_is_a: HGNC:ATP5MC1 -inverse_is_a: HGNC:ATP5MC2 -inverse_is_a: HGNC:ATP5MC3 +relationship: part_of FPLX:000060 ! ATP_synthase +relationship: inverse_is_a HGNC:841 ! ATP5MC1 +relationship: inverse_is_a HGNC:842 ! ATP5MC2 +relationship: inverse_is_a HGNC:843 ! ATP5MC3 [Term] -id: FPLX:ATP_synthase +id: FPLX:000060 name: ATP-synthase synonym: "ATP synthase" EXACT [] xref: BEL:"Proton Transporting ATP Synthase Complex" -is_a: FPLX:root -has_part: HGNC:ATP5F1A -has_part: HGNC:ATP5F1B -has_part: HGNC:ATP5F1C -has_part: HGNC:ATP5F1D -has_part: HGNC:ATP5F1E -has_part: HGNC:ATP5MD -has_part: HGNC:ATP5ME -has_part: HGNC:ATP5MF -has_part: HGNC:ATP5MG -has_part: HGNC:ATP5MPL -has_part: HGNC:MT-ATP6 -has_part: HGNC:MT-ATP8 -has_part: HGNC:ATP5PB -has_part: HGNC:ATP5PD -has_part: HGNC:ATP5PF -has_part: HGNC:ATP5PO -has_part: HGNC:ATP5IF1 -has_part: FPLX:ATP5G - -[Term] -id: FPLX:Augmin +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:823 ! ATP5F1A +relationship: has_part HGNC:830 ! ATP5F1B +relationship: has_part HGNC:833 ! ATP5F1C +relationship: has_part HGNC:837 ! ATP5F1D +relationship: has_part HGNC:838 ! ATP5F1E +relationship: has_part HGNC:30889 ! ATP5MD +relationship: has_part HGNC:846 ! ATP5ME +relationship: has_part HGNC:848 ! ATP5MF +relationship: has_part HGNC:14247 ! ATP5MG +relationship: has_part HGNC:1188 ! ATP5MPL +relationship: has_part HGNC:7414 ! MT-ATP6 +relationship: has_part HGNC:7415 ! MT-ATP8 +relationship: has_part HGNC:840 ! ATP5PB +relationship: has_part HGNC:845 ! ATP5PD +relationship: has_part HGNC:847 ! ATP5PF +relationship: has_part HGNC:850 ! ATP5PO +relationship: has_part HGNC:871 ! ATP5IF1 +relationship: has_part FPLX:000059 ! ATP5G + +[Term] +id: FPLX:000061 name: Augmin synonym: "Augmin" EXACT [] synonym: "HAUS" EXACT [] @@ -978,18 +997,18 @@ synonym: "HAUS complex" EXACT [] xref: GO:0070652 xref: HGNC_GROUP:581 xref: RE:R-HSA-8855211 -is_a: FPLX:root -has_part: HGNC:HAUS1 -has_part: HGNC:HAUS2 -has_part: HGNC:HAUS3 -has_part: HGNC:HAUS4 -has_part: HGNC:HAUS5 -has_part: HGNC:HAUS6 -has_part: HGNC:HAUS7 -has_part: HGNC:HAUS8 - -[Term] -id: FPLX:AXIN +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:25174 ! HAUS1 +relationship: has_part HGNC:25530 ! HAUS2 +relationship: has_part HGNC:28719 ! HAUS3 +relationship: has_part HGNC:20163 ! HAUS4 +relationship: has_part HGNC:29130 ! HAUS5 +relationship: has_part HGNC:25948 ! HAUS6 +relationship: has_part HGNC:32979 ! HAUS7 +relationship: has_part HGNC:30532 ! HAUS8 + +[Term] +id: FPLX:000062 name: AXIN synonym: "Axin" EXACT [] synonym: "hAxin" EXACT [] @@ -1000,25 +1019,25 @@ xref: RE:R-HSA-3640819 xref: RE:R-HSA-3640863 xref: RE:R-HSA-3772502 xref: RE:R-HSA-4641132 -is_a: FPLX:root -inverse_is_a: HGNC:AXIN1 -inverse_is_a: HGNC:AXIN2 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:903 ! AXIN1 +relationship: inverse_is_a HGNC:904 ! AXIN2 [Term] -id: FPLX:B3GAT +id: FPLX:000063 name: B3GAT synonym: "B3GAT" EXACT [] synonym: "Beta-1,3-glucuronyltransferase" EXACT [] synonym: "Beta-1,3-glucuronyltransferases" EXACT [] synonym: "beta-1,3-glucuronyltransferase" EXACT [] synonym: "beta-1,3-glucuronyltransferases" EXACT [] -is_a: FPLX:Glycosyltransferase -inverse_is_a: HGNC:B3GAT1 -inverse_is_a: HGNC:B3GAT2 -inverse_is_a: HGNC:B3GAT3 +is_a: FPLX:000198 ! Glycosyltransferase +relationship: inverse_is_a HGNC:921 ! B3GAT1 +relationship: inverse_is_a HGNC:922 ! B3GAT2 +relationship: inverse_is_a HGNC:923 ! B3GAT3 [Term] -id: FPLX:BCKDC +id: FPLX:000064 name: BCKDC synonym: "BCKDC" EXACT [] synonym: "BCKDH" EXACT [] @@ -1030,14 +1049,14 @@ xref: BEL:"Branched Chain Alpha Keto Acid Dehydrogenase Complex" xref: RE:R-HSA-5693120 xref: RE:R-HSA-6792583 xref: RE:R-HSA-70019 -is_a: FPLX:root -has_part: HGNC:BCKDHA -has_part: HGNC:BCKDHB -has_part: HGNC:DBT -has_part: HGNC:DLD +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:986 ! BCKDHA +relationship: has_part HGNC:987 ! BCKDHB +relationship: has_part HGNC:2698 ! DBT +relationship: has_part HGNC:2898 ! DLD [Term] -id: FPLX:Beta_3_4_GTF +id: FPLX:000065 name: Beta-3-4-GTF synonym: "Beta 3-glycosyltransferase" EXACT [] synonym: "Beta 3-glycosyltransferases" EXACT [] @@ -1047,97 +1066,97 @@ synonym: "Beta 4-glycosyltransferase" EXACT [] synonym: "Beta 4-glycosyltransferases" EXACT [] synonym: "beta 4-glycosyltransferase" EXACT [] synonym: "beta 4-glycosyltransferases" EXACT [] -is_a: FPLX:Glycosyltransferase -inverse_is_a: HGNC:B3GALNT1 -inverse_is_a: HGNC:B3GALNT2 -inverse_is_a: HGNC:B3GLCT -inverse_is_a: HGNC:B3GALT1 -inverse_is_a: HGNC:B3GALT2 -inverse_is_a: HGNC:B3GALT4 -inverse_is_a: HGNC:B3GALT5 -inverse_is_a: HGNC:B3GALT6 -inverse_is_a: HGNC:B3GNT2 -inverse_is_a: HGNC:B3GNT3 -inverse_is_a: HGNC:B3GNT4 -inverse_is_a: HGNC:B3GNT5 -inverse_is_a: HGNC:B3GNT6 -inverse_is_a: HGNC:B3GNT7 -inverse_is_a: HGNC:B3GNT8 -inverse_is_a: HGNC:B3GNT9 -inverse_is_a: HGNC:CHPF -inverse_is_a: HGNC:CHPF2 -inverse_is_a: HGNC:CHSY1 -inverse_is_a: HGNC:CHSY3 -inverse_is_a: HGNC:C1GALT1 -inverse_is_a: HGNC:LFNG -inverse_is_a: HGNC:MFNG -inverse_is_a: HGNC:RFNG -inverse_is_a: HGNC:B4GALNT1 -inverse_is_a: HGNC:B4GALNT2 -inverse_is_a: HGNC:B4GALNT3 -inverse_is_a: HGNC:B4GALNT4 -inverse_is_a: HGNC:B4GALT1 -inverse_is_a: HGNC:B4GALT2 -inverse_is_a: HGNC:B4GALT3 -inverse_is_a: HGNC:B4GALT4 -inverse_is_a: HGNC:B4GALT5 -inverse_is_a: HGNC:B4GALT6 -inverse_is_a: HGNC:B4GALT7 -inverse_is_a: HGNC:CSGALNACT1 -inverse_is_a: HGNC:CSGALNACT2 - -[Term] -id: FPLX:BIRC +is_a: FPLX:000198 ! Glycosyltransferase +relationship: inverse_is_a HGNC:918 ! B3GALNT1 +relationship: inverse_is_a HGNC:28596 ! B3GALNT2 +relationship: inverse_is_a HGNC:20207 ! B3GLCT +relationship: inverse_is_a HGNC:916 ! B3GALT1 +relationship: inverse_is_a HGNC:917 ! B3GALT2 +relationship: inverse_is_a HGNC:919 ! B3GALT4 +relationship: inverse_is_a HGNC:920 ! B3GALT5 +relationship: inverse_is_a HGNC:17978 ! B3GALT6 +relationship: inverse_is_a HGNC:15629 ! B3GNT2 +relationship: inverse_is_a HGNC:13528 ! B3GNT3 +relationship: inverse_is_a HGNC:15683 ! B3GNT4 +relationship: inverse_is_a HGNC:15684 ! B3GNT5 +relationship: inverse_is_a HGNC:24141 ! B3GNT6 +relationship: inverse_is_a HGNC:18811 ! B3GNT7 +relationship: inverse_is_a HGNC:24139 ! B3GNT8 +relationship: inverse_is_a HGNC:28714 ! B3GNT9 +relationship: inverse_is_a HGNC:24291 ! CHPF +relationship: inverse_is_a HGNC:29270 ! CHPF2 +relationship: inverse_is_a HGNC:17198 ! CHSY1 +relationship: inverse_is_a HGNC:24293 ! CHSY3 +relationship: inverse_is_a HGNC:24337 ! C1GALT1 +relationship: inverse_is_a HGNC:6560 ! LFNG +relationship: inverse_is_a HGNC:7038 ! MFNG +relationship: inverse_is_a HGNC:9974 ! RFNG +relationship: inverse_is_a HGNC:4117 ! B4GALNT1 +relationship: inverse_is_a HGNC:24136 ! B4GALNT2 +relationship: inverse_is_a HGNC:24137 ! B4GALNT3 +relationship: inverse_is_a HGNC:26315 ! B4GALNT4 +relationship: inverse_is_a HGNC:924 ! B4GALT1 +relationship: inverse_is_a HGNC:925 ! B4GALT2 +relationship: inverse_is_a HGNC:926 ! B4GALT3 +relationship: inverse_is_a HGNC:927 ! B4GALT4 +relationship: inverse_is_a HGNC:928 ! B4GALT5 +relationship: inverse_is_a HGNC:929 ! B4GALT6 +relationship: inverse_is_a HGNC:930 ! B4GALT7 +relationship: inverse_is_a HGNC:24290 ! CSGALNACT1 +relationship: inverse_is_a HGNC:24292 ! CSGALNACT2 + +[Term] +id: FPLX:000066 name: BIRC synonym: "BIRs" EXACT [] xref: BEL:"BIRC Family" xref: IP:IPR001370 -is_a: FPLX:root -inverse_is_a: HGNC:BIRC2 -inverse_is_a: HGNC:BIRC3 -inverse_is_a: HGNC:BIRC5 -inverse_is_a: HGNC:BIRC6 -inverse_is_a: HGNC:BIRC7 -inverse_is_a: HGNC:BIRC8 -inverse_is_a: HGNC:NAIP -inverse_is_a: HGNC:XIAP - -[Term] -id: FPLX:BMP +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:590 ! BIRC2 +relationship: inverse_is_a HGNC:591 ! BIRC3 +relationship: inverse_is_a HGNC:593 ! BIRC5 +relationship: inverse_is_a HGNC:13516 ! BIRC6 +relationship: inverse_is_a HGNC:13702 ! BIRC7 +relationship: inverse_is_a HGNC:14878 ! BIRC8 +relationship: inverse_is_a HGNC:7634 ! NAIP +relationship: inverse_is_a HGNC:592 ! XIAP + +[Term] +id: FPLX:000067 name: BMP synonym: "BMP" EXACT [] xref: BEL:"BMP Family" xref: NCIT:C17274 xref: XFAM:PF02608 -is_a: FPLX:root -inverse_is_a: HGNC:BMP1 -inverse_is_a: HGNC:BMP2 -inverse_is_a: HGNC:BMP3 -inverse_is_a: HGNC:BMP4 -inverse_is_a: HGNC:BMP5 -inverse_is_a: HGNC:BMP6 -inverse_is_a: HGNC:BMP7 -inverse_is_a: HGNC:BMP8A -inverse_is_a: HGNC:BMP8B -inverse_is_a: HGNC:BMP10 -inverse_is_a: HGNC:BMP15 -inverse_is_a: HGNC:GDF1 -inverse_is_a: HGNC:GDF2 -inverse_is_a: HGNC:GDF3 -inverse_is_a: HGNC:GDF5 -inverse_is_a: HGNC:GDF6 -inverse_is_a: HGNC:GDF7 - -[Term] -id: FPLX:BMP_receptor +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:1067 ! BMP1 +relationship: inverse_is_a HGNC:1069 ! BMP2 +relationship: inverse_is_a HGNC:1070 ! BMP3 +relationship: inverse_is_a HGNC:1071 ! BMP4 +relationship: inverse_is_a HGNC:1072 ! BMP5 +relationship: inverse_is_a HGNC:1073 ! BMP6 +relationship: inverse_is_a HGNC:1074 ! BMP7 +relationship: inverse_is_a HGNC:21650 ! BMP8A +relationship: inverse_is_a HGNC:1075 ! BMP8B +relationship: inverse_is_a HGNC:20869 ! BMP10 +relationship: inverse_is_a HGNC:1068 ! BMP15 +relationship: inverse_is_a HGNC:4214 ! GDF1 +relationship: inverse_is_a HGNC:4217 ! GDF2 +relationship: inverse_is_a HGNC:4218 ! GDF3 +relationship: inverse_is_a HGNC:4220 ! GDF5 +relationship: inverse_is_a HGNC:4221 ! GDF6 +relationship: inverse_is_a HGNC:4222 ! GDF7 + +[Term] +id: FPLX:000068 name: BMP-receptor xref: SIGNOR:SIGNOR-PF9 -is_a: FPLX:root -inverse_is_a: FPLX:BMP_receptor_type_I -inverse_is_a: FPLX:BMP_receptor_type_II +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a FPLX:000069 ! BMP_receptor_type_I +relationship: inverse_is_a FPLX:000070 ! BMP_receptor_type_II [Term] -id: FPLX:BMP_receptor_type_I +id: FPLX:000069 name: BMP-receptor-type-I synonym: "BMP Receptor Type I" EXACT [] synonym: "BMP type I receptor" EXACT [] @@ -1148,13 +1167,13 @@ synonym: "bone morphogenetic protein type I receptors" EXACT [] synonym: "BRI" EXACT [] xref: BEL:"BMP Receptor Type I Family" xref: MEDSCAN:urn:agi-protfc:bone%20morphogenetic%20protein%20I%20receptor -is_a: FPLX:BMP_receptor -inverse_is_a: HGNC:ACVR1 -inverse_is_a: HGNC:BMPR1A -inverse_is_a: HGNC:BMPR1B +is_a: FPLX:000068 ! BMP_receptor +relationship: inverse_is_a HGNC:171 ! ACVR1 +relationship: inverse_is_a HGNC:1076 ! BMPR1A +relationship: inverse_is_a HGNC:1077 ! BMPR1B [Term] -id: FPLX:BMP_receptor_type_II +id: FPLX:000070 name: BMP-receptor-type-II synonym: "BMP Receptor Type II" EXACT [] synonym: "BMP type II receptor" EXACT [] @@ -1165,21 +1184,21 @@ synonym: "BRII" EXACT [] xref: BEL:"BMP Receptor Type II Family" xref: RE:R-HSA-201465 xref: RE:R-HSA-201804 -is_a: FPLX:BMP_receptor -inverse_is_a: HGNC:ACVR2A -inverse_is_a: HGNC:ACVR2B -inverse_is_a: HGNC:BMPR2 +is_a: FPLX:000068 ! BMP_receptor +relationship: inverse_is_a HGNC:173 ! ACVR2A +relationship: inverse_is_a HGNC:174 ! ACVR2B +relationship: inverse_is_a HGNC:1078 ! BMPR2 [Term] -id: FPLX:BRCA +id: FPLX:000071 name: BRCA synonym: "BRCA" EXACT [] -is_a: FPLX:root -inverse_is_a: HGNC:BRCA1 -inverse_is_a: HGNC:BRCA2 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:1100 ! BRCA1 +relationship: inverse_is_a HGNC:1101 ! BRCA2 [Term] -id: FPLX:C1 +id: FPLX:000072 name: C1 synonym: "c1 complex" EXACT [] synonym: "C1" EXACT [] @@ -1188,24 +1207,24 @@ xref: BEL:"C1 Complex" xref: RE:R-HSA-173584 xref: RE:R-HSA-173615 xref: RE:R-HSA-173617 -is_a: FPLX:root -has_part: HGNC:C1QA -has_part: HGNC:C1QB -has_part: HGNC:C1QC -has_part: HGNC:C1R -has_part: HGNC:C1S +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:1241 ! C1QA +relationship: has_part HGNC:1242 ! C1QB +relationship: has_part HGNC:1245 ! C1QC +relationship: has_part HGNC:1246 ! C1R +relationship: has_part HGNC:1247 ! C1S [Term] -id: FPLX:C1q +id: FPLX:000073 name: C1q synonym: "C1q" EXACT [] xref: BEL:"C1q Complex" -is_a: FPLX:root -has_part: HGNC:C1QA -has_part: HGNC:C1QB +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:1241 ! C1QA +relationship: has_part HGNC:1242 ! C1QB [Term] -id: FPLX:Cadherin +id: FPLX:000074 name: Cadherin synonym: "cadherin" EXACT [] xref: BEL:"CDH Family" @@ -1213,31 +1232,31 @@ xref: MEDSCAN:urn:agi-complex:prophash-8a9e47ee0ee03d8d8b6e029e2fba6896 xref: MEDSCAN:urn:agi-protfc:cadherin xref: NCIT:C16373 xref: XFAM:PF00028 -is_a: FPLX:root -inverse_is_a: HGNC:CDH1 -inverse_is_a: HGNC:CDH10 -inverse_is_a: HGNC:CDH11 -inverse_is_a: HGNC:CDH12 -inverse_is_a: HGNC:CDH13 -inverse_is_a: HGNC:CDH15 -inverse_is_a: HGNC:CDH16 -inverse_is_a: HGNC:CDH17 -inverse_is_a: HGNC:CDH18 -inverse_is_a: HGNC:CDH19 -inverse_is_a: HGNC:CDH2 -inverse_is_a: HGNC:CDH20 -inverse_is_a: HGNC:CDH22 -inverse_is_a: HGNC:CDH24 -inverse_is_a: HGNC:CDH3 -inverse_is_a: HGNC:CDH4 -inverse_is_a: HGNC:CDH5 -inverse_is_a: HGNC:CDH6 -inverse_is_a: HGNC:CDH7 -inverse_is_a: HGNC:CDH8 -inverse_is_a: HGNC:CDH9 - -[Term] -id: FPLX:CALM +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:1748 ! CDH1 +relationship: inverse_is_a HGNC:1749 ! CDH10 +relationship: inverse_is_a HGNC:1750 ! CDH11 +relationship: inverse_is_a HGNC:1751 ! CDH12 +relationship: inverse_is_a HGNC:1753 ! CDH13 +relationship: inverse_is_a HGNC:1754 ! CDH15 +relationship: inverse_is_a HGNC:1755 ! CDH16 +relationship: inverse_is_a HGNC:1756 ! CDH17 +relationship: inverse_is_a HGNC:1757 ! CDH18 +relationship: inverse_is_a HGNC:1758 ! CDH19 +relationship: inverse_is_a HGNC:1759 ! CDH2 +relationship: inverse_is_a HGNC:1760 ! CDH20 +relationship: inverse_is_a HGNC:13251 ! CDH22 +relationship: inverse_is_a HGNC:14265 ! CDH24 +relationship: inverse_is_a HGNC:1762 ! CDH3 +relationship: inverse_is_a HGNC:1763 ! CDH4 +relationship: inverse_is_a HGNC:1764 ! CDH5 +relationship: inverse_is_a HGNC:1765 ! CDH6 +relationship: inverse_is_a HGNC:1766 ! CDH7 +relationship: inverse_is_a HGNC:1767 ! CDH8 +relationship: inverse_is_a HGNC:1768 ! CDH9 + +[Term] +id: FPLX:000075 name: CALM synonym: "Calmodulin" EXACT [] synonym: "calmodulin" EXACT [] @@ -1247,28 +1266,28 @@ xref: MEDSCAN:urn:agi-aopfc:0000452 xref: MEDSCAN:urn:agi-complex:prophash-f7e292d6e30998b81cf5f772ab430f11 xref: NCIT:C16375 xref: NEXTPROT-FAMILY:00440 -is_a: FPLX:root -inverse_is_a: HGNC:CALM1 -inverse_is_a: HGNC:CALM2 -inverse_is_a: HGNC:CALM3 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:1442 ! CALM1 +relationship: inverse_is_a HGNC:1445 ! CALM2 +relationship: inverse_is_a HGNC:1449 ! CALM3 [Term] -id: FPLX:CAMK +id: FPLX:000076 name: CAMK synonym: "CaMK family" EXACT [] synonym: "CaMK" EXACT [] xref: BEL:"CAMK Family" xref: ECCODE:2.7.11.17 xref: NEXTPROT-FAMILY:03072 -is_a: FPLX:root -inverse_is_a: HGNC:CAMK1 -inverse_is_a: HGNC:CAMK1D -inverse_is_a: HGNC:CAMK1G -inverse_is_a: HGNC:CAMK4 -inverse_is_a: FPLX:CAMK2_family +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:1459 ! CAMK1 +relationship: inverse_is_a HGNC:19341 ! CAMK1D +relationship: inverse_is_a HGNC:14585 ! CAMK1G +relationship: inverse_is_a HGNC:1464 ! CAMK4 +relationship: inverse_is_a FPLX:000078 ! CAMK2_family [Term] -id: FPLX:CAMK2_complex +id: FPLX:000077 name: CAMK2-complex synonym: "Ca(2+)-calmodulin-dependent protein kinase II" EXACT [] synonym: "Ca(2+)/calmodulin-dependent kinase II" EXACT [] @@ -1282,14 +1301,14 @@ xref: RE:R-HSA-417004 xref: RE:R-HSA-432792 xref: RE:R-HSA-444796 xref: RE:R-HSA-445374 -is_a: FPLX:root -has_part: HGNC:CAMK2A -has_part: HGNC:CAMK2B -has_part: HGNC:CAMK2D -has_part: HGNC:CAMK2G +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:1460 ! CAMK2A +relationship: has_part HGNC:1461 ! CAMK2B +relationship: has_part HGNC:1462 ! CAMK2D +relationship: has_part HGNC:1463 ! CAMK2G [Term] -id: FPLX:CAMK2_family +id: FPLX:000078 name: CAMK2-family synonym: "calmodulindependent kinase II" EXACT [] synonym: "CAMK2" EXACT [] @@ -1301,14 +1320,14 @@ xref: RE:R-HSA-417004 xref: RE:R-HSA-432792 xref: RE:R-HSA-444796 xref: RE:R-HSA-445374 -is_a: FPLX:CAMK -inverse_is_a: HGNC:CAMK2A -inverse_is_a: HGNC:CAMK2B -inverse_is_a: HGNC:CAMK2D -inverse_is_a: HGNC:CAMK2G +is_a: FPLX:000076 ! CAMK +relationship: inverse_is_a HGNC:1460 ! CAMK2A +relationship: inverse_is_a HGNC:1461 ! CAMK2B +relationship: inverse_is_a HGNC:1462 ! CAMK2D +relationship: inverse_is_a HGNC:1463 ! CAMK2G [Term] -id: FPLX:CAPN +id: FPLX:000079 name: CAPN synonym: "calpain" EXACT [] xref: BEL:"CAPN Family" @@ -1317,39 +1336,39 @@ xref: IP:IPR022684 xref: NCIT:C16377 xref: RE:R-HSA-8848649 xref: RE:R-HSA-8848668 -is_a: FPLX:root -inverse_is_a: HGNC:CAPN1 -inverse_is_a: HGNC:CAPN10 -inverse_is_a: HGNC:CAPN11 -inverse_is_a: HGNC:CAPN12 -inverse_is_a: HGNC:CAPN13 -inverse_is_a: HGNC:CAPN14 -inverse_is_a: HGNC:CAPN2 -inverse_is_a: HGNC:CAPN3 -inverse_is_a: HGNC:CAPN5 -inverse_is_a: HGNC:CAPN6 -inverse_is_a: HGNC:CAPN7 -inverse_is_a: HGNC:CAPN9 -inverse_is_a: HGNC:CAPN15 -inverse_is_a: HGNC:CAPN8 - -[Term] -id: FPLX:Carboxylesterase +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:1476 ! CAPN1 +relationship: inverse_is_a HGNC:1477 ! CAPN10 +relationship: inverse_is_a HGNC:1478 ! CAPN11 +relationship: inverse_is_a HGNC:13249 ! CAPN12 +relationship: inverse_is_a HGNC:16663 ! CAPN13 +relationship: inverse_is_a HGNC:16664 ! CAPN14 +relationship: inverse_is_a HGNC:1479 ! CAPN2 +relationship: inverse_is_a HGNC:1480 ! CAPN3 +relationship: inverse_is_a HGNC:1482 ! CAPN5 +relationship: inverse_is_a HGNC:1483 ! CAPN6 +relationship: inverse_is_a HGNC:1484 ! CAPN7 +relationship: inverse_is_a HGNC:1486 ! CAPN9 +relationship: inverse_is_a HGNC:11182 ! CAPN15 +relationship: inverse_is_a HGNC:1485 ! CAPN8 + +[Term] +id: FPLX:000080 name: Carboxylesterase synonym: "carboxylesterase" EXACT [] synonym: "carboxylesterases" EXACT [] xref: BEL:"Carboxylesterase Family" xref: ECCODE:3.1.1.1 xref: NCIT:C112051 -is_a: FPLX:root -inverse_is_a: HGNC:CES1 -inverse_is_a: HGNC:CES2 -inverse_is_a: HGNC:CES3 -inverse_is_a: HGNC:CES4A -inverse_is_a: HGNC:CES5A +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:1863 ! CES1 +relationship: inverse_is_a HGNC:1864 ! CES2 +relationship: inverse_is_a HGNC:1865 ! CES3 +relationship: inverse_is_a HGNC:26741 ! CES4A +relationship: inverse_is_a HGNC:26459 ! CES5A [Term] -id: FPLX:Caspase +id: FPLX:000081 name: Caspase synonym: "caspase" EXACT [] synonym: "caspases" EXACT [] @@ -1360,30 +1379,30 @@ xref: IP:IPR033139 xref: MESH:D020169 xref: NCIT:C18153 xref: XFAM:PF00656 -is_a: FPLX:root -inverse_is_a: HGNC:CASP1 -inverse_is_a: HGNC:CASP2 -inverse_is_a: HGNC:CASP4 -inverse_is_a: HGNC:CASP5 -inverse_is_a: HGNC:CASP6 -inverse_is_a: HGNC:CASP8 -inverse_is_a: HGNC:CASP9 -inverse_is_a: HGNC:CASP10 -inverse_is_a: HGNC:CASP12 -inverse_is_a: HGNC:CASP14 -inverse_is_a: FPLX:Caspase_3_7 - -[Term] -id: FPLX:Caspase_3_7 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:1499 ! CASP1 +relationship: inverse_is_a HGNC:1503 ! CASP2 +relationship: inverse_is_a HGNC:1505 ! CASP4 +relationship: inverse_is_a HGNC:1506 ! CASP5 +relationship: inverse_is_a HGNC:1507 ! CASP6 +relationship: inverse_is_a HGNC:1509 ! CASP8 +relationship: inverse_is_a HGNC:1511 ! CASP9 +relationship: inverse_is_a HGNC:1500 ! CASP10 +relationship: inverse_is_a HGNC:19004 ! CASP12 +relationship: inverse_is_a HGNC:1502 ! CASP14 +relationship: inverse_is_a FPLX:000082 ! Caspase_3_7 + +[Term] +id: FPLX:000082 name: Caspase-3-7 synonym: "caspase-3/7" EXACT [] xref: RE:R-HSA-202877 -is_a: FPLX:Caspase -inverse_is_a: HGNC:CASP3 -inverse_is_a: HGNC:CASP7 +is_a: FPLX:000081 ! Caspase +relationship: inverse_is_a HGNC:1504 ! CASP3 +relationship: inverse_is_a HGNC:1508 ! CASP7 [Term] -id: FPLX:CAV +id: FPLX:000083 name: CAV synonym: "Caveolin" EXACT [] synonym: "caveolin" EXACT [] @@ -1393,14 +1412,15 @@ xref: IP:IPR018361 xref: MEDSCAN:urn:agi-protfc:caveolin xref: NEXTPROT-FAMILY:00489 xref: XFAM:PF01146 -is_a: FPLX:root -inverse_is_a: HGNC:CAV1 -inverse_is_a: HGNC:CAV2 -inverse_is_a: HGNC:CAV3 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:1527 ! CAV1 +relationship: inverse_is_a HGNC:1528 ! CAV2 +relationship: inverse_is_a HGNC:1529 ! CAV3 [Term] -id: FPLX:CBF3 +id: FPLX:000084 name: CBF3 +def: "SKP1 (together with SKP2) was identified as an essential component of the cyclin A-CDK2 S phase kinase complex" [interpro:IPR016072] synonym: "CBF3 complex" EXACT [] synonym: "CBF3" EXACT [] synonym: "kinetochore centromere binding factor 3" EXACT [] @@ -1408,11 +1428,11 @@ xref: BEL:"CBF3 Complex" xref: GO:0031518 xref: IP:IPR016072 xref: IP:IPR016897 -is_a: FPLX:root -has_part: HGNC:SKP1 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:10899 ! SKP1 [Term] -id: FPLX:CCT_complex +id: FPLX:000085 name: CCT-complex synonym: "CCT complex" EXACT [] synonym: "CCT" EXACT [] @@ -1427,75 +1447,75 @@ xref: IP:IPR002194 xref: MEDSCAN:urn:agi-complex:prophash-cd6413d79122d5489ee4b4e339245b61 xref: RE:R-HSA-390455 xref: RE:R-HSA-390474 -is_a: FPLX:root -has_part: HGNC:CCT2 -has_part: HGNC:CCT3 -has_part: HGNC:CCT4 -has_part: HGNC:CCT5 -has_part: HGNC:CCT6A -has_part: HGNC:CCT6B -has_part: HGNC:CCT7 -has_part: HGNC:CCT8 -has_part: HGNC:TCP1 - -[Term] -id: FPLX:CD16 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:1615 ! CCT2 +relationship: has_part HGNC:1616 ! CCT3 +relationship: has_part HGNC:1617 ! CCT4 +relationship: has_part HGNC:1618 ! CCT5 +relationship: has_part HGNC:1620 ! CCT6A +relationship: has_part HGNC:1621 ! CCT6B +relationship: has_part HGNC:1622 ! CCT7 +relationship: has_part HGNC:1623 ! CCT8 +relationship: has_part HGNC:11655 ! TCP1 + +[Term] +id: FPLX:000086 name: CD16 synonym: "CD16" EXACT [] xref: BEL:"CD16 Family" xref: NCIT:C17487 -is_a: FPLX:root -inverse_is_a: HGNC:FCGR3A -inverse_is_a: HGNC:FCGR3B +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:3619 ! FCGR3A +relationship: inverse_is_a HGNC:3620 ! FCGR3B [Term] -id: FPLX:CD3 +id: FPLX:000087 name: CD3 synonym: "CD3" EXACT [] xref: BEL:"CD3 Complex" xref: MEDSCAN:urn:agi-complex:CD3%20complex xref: NCIT:C38897 -is_a: FPLX:root -has_part: HGNC:CD247 -has_part: HGNC:CD3D -has_part: HGNC:CD3E -has_part: HGNC:CD3G +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:1677 ! CD247 +relationship: has_part HGNC:1673 ! CD3D +relationship: has_part HGNC:1674 ! CD3E +relationship: has_part HGNC:1675 ! CD3G [Term] -id: FPLX:CD32 +id: FPLX:000088 name: CD32 synonym: "CD32" EXACT [] xref: BEL:"CD32 Family" xref: NCIT:C18308 -is_a: FPLX:root -inverse_is_a: HGNC:FCGR2A -inverse_is_a: HGNC:FCGR2B -inverse_is_a: HGNC:FCGR2C +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:3616 ! FCGR2A +relationship: inverse_is_a HGNC:3618 ! FCGR2B +relationship: inverse_is_a HGNC:15626 ! FCGR2C [Term] -id: FPLX:CD64 +id: FPLX:000089 name: CD64 synonym: "CD64" EXACT [] xref: BEL:"CD64 Family" xref: RE:R-HSA-1031694 xref: RE:R-HSA-1236898 xref: RE:R-HSA-1236905 -is_a: FPLX:root -inverse_is_a: HGNC:FCGR1A -inverse_is_a: HGNC:FCGR1B +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:3613 ! FCGR1A +relationship: inverse_is_a HGNC:3614 ! FCGR1B [Term] -id: FPLX:CD8 +id: FPLX:000090 name: CD8 synonym: "CD8" EXACT [] xref: MEDSCAN:urn:agi-complex:CD8 xref: RE:R-HSA-198899 -is_a: FPLX:root -inverse_is_a: HGNC:CD8A -inverse_is_a: HGNC:CD8B +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:1706 ! CD8A +relationship: inverse_is_a HGNC:1707 ! CD8B [Term] -id: FPLX:CDC25 +id: FPLX:000091 name: CDC25 synonym: "CDC25 family" EXACT [] synonym: "Cdc25 phosphatases" EXACT [] @@ -1506,13 +1526,13 @@ xref: IP:IPR000751 xref: MEDSCAN:urn:agi-aopfc:0000551 xref: RE:R-HSA-170108 xref: RE:R-HSA-69261 -is_a: FPLX:root -inverse_is_a: HGNC:CDC25A -inverse_is_a: HGNC:CDC25B -inverse_is_a: HGNC:CDC25C +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:1725 ! CDC25A +relationship: inverse_is_a HGNC:1726 ! CDC25B +relationship: inverse_is_a HGNC:1727 ! CDC25C [Term] -id: FPLX:CDK +id: FPLX:000092 name: CDK synonym: "CDK" EXACT [] synonym: "Cdk" EXACT [] @@ -1521,45 +1541,45 @@ xref: ECCODE:2.7.11.22 xref: MEDSCAN:urn:agi-complex:prophash-4dda466320b1a32b046d823accadbaee xref: MESH:D018844 xref: NCIT:C17767 -is_a: FPLX:root -inverse_is_a: HGNC:CDKL1 -inverse_is_a: HGNC:CDKL2 -inverse_is_a: HGNC:CDKL3 -inverse_is_a: HGNC:CDKL4 -inverse_is_a: HGNC:CDKL5 -inverse_is_a: FPLX:CDK1_2 -inverse_is_a: HGNC:CDK3 -inverse_is_a: HGNC:CDK4 -inverse_is_a: HGNC:CDK5 -inverse_is_a: HGNC:CDK6 -inverse_is_a: HGNC:CDK7 -inverse_is_a: HGNC:CDK8 -inverse_is_a: HGNC:CDK9 -inverse_is_a: HGNC:CDK10 -inverse_is_a: HGNC:CDK11A -inverse_is_a: HGNC:CDK11B -inverse_is_a: HGNC:CDK12 -inverse_is_a: HGNC:CDK13 -inverse_is_a: HGNC:CDK14 -inverse_is_a: HGNC:CDK15 -inverse_is_a: HGNC:CDK16 -inverse_is_a: HGNC:CDK17 -inverse_is_a: HGNC:CDK18 -inverse_is_a: HGNC:CDK19 -inverse_is_a: HGNC:CDK20 - -[Term] -id: FPLX:CDK1_2 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:1781 ! CDKL1 +relationship: inverse_is_a HGNC:1782 ! CDKL2 +relationship: inverse_is_a HGNC:15483 ! CDKL3 +relationship: inverse_is_a HGNC:19287 ! CDKL4 +relationship: inverse_is_a HGNC:11411 ! CDKL5 +relationship: inverse_is_a FPLX:000093 ! CDK1_2 +relationship: inverse_is_a HGNC:1772 ! CDK3 +relationship: inverse_is_a HGNC:1773 ! CDK4 +relationship: inverse_is_a HGNC:1774 ! CDK5 +relationship: inverse_is_a HGNC:1777 ! CDK6 +relationship: inverse_is_a HGNC:1778 ! CDK7 +relationship: inverse_is_a HGNC:1779 ! CDK8 +relationship: inverse_is_a HGNC:1780 ! CDK9 +relationship: inverse_is_a HGNC:1770 ! CDK10 +relationship: inverse_is_a HGNC:1730 ! CDK11A +relationship: inverse_is_a HGNC:1729 ! CDK11B +relationship: inverse_is_a HGNC:24224 ! CDK12 +relationship: inverse_is_a HGNC:1733 ! CDK13 +relationship: inverse_is_a HGNC:8883 ! CDK14 +relationship: inverse_is_a HGNC:14434 ! CDK15 +relationship: inverse_is_a HGNC:8749 ! CDK16 +relationship: inverse_is_a HGNC:8750 ! CDK17 +relationship: inverse_is_a HGNC:8751 ! CDK18 +relationship: inverse_is_a HGNC:19338 ! CDK19 +relationship: inverse_is_a HGNC:21420 ! CDK20 + +[Term] +id: FPLX:000093 name: CDK1-2 synonym: "CDK1/2" EXACT [] synonym: "cdk1/2" EXACT [] synonym: "Cdk1/2" EXACT [] -is_a: FPLX:CDK -inverse_is_a: HGNC:CDK1 -inverse_is_a: HGNC:CDK2 +is_a: FPLX:000092 ! CDK +relationship: inverse_is_a HGNC:1722 ! CDK1 +relationship: inverse_is_a HGNC:1771 ! CDK2 [Term] -id: FPLX:CDKN +id: FPLX:000094 name: CDKN synonym: "CDKN" EXACT [] synonym: "CKI" EXACT [] @@ -1568,100 +1588,100 @@ synonym: "cyclin-dependent kinase inhibitor" EXACT [] synonym: "cyclin-dependent protein kinase inhibitors" EXACT [] xref: NCIT:C18492 xref: XFAM:PF02234 -is_a: FPLX:root -inverse_is_a: FPLX:CDKN1 -inverse_is_a: FPLX:CDKN2 -inverse_is_a: HGNC:CDKN3 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a FPLX:000095 ! CDKN1 +relationship: inverse_is_a FPLX:000096 ! CDKN2 +relationship: inverse_is_a HGNC:1791 ! CDKN3 [Term] -id: FPLX:CDKN1 +id: FPLX:000095 name: CDKN1 synonym: "CDKN1" EXACT [] xref: IP:IPR003175 xref: RE:R-HSA-8941923 xref: RE:R-HSA-8942604 xref: RE:R-HSA-8948131 -is_a: FPLX:CDKN -inverse_is_a: HGNC:CDKN1A -inverse_is_a: HGNC:CDKN1B -inverse_is_a: HGNC:CDKN1C +is_a: FPLX:000094 ! CDKN +relationship: inverse_is_a HGNC:1784 ! CDKN1A +relationship: inverse_is_a HGNC:1785 ! CDKN1B +relationship: inverse_is_a HGNC:1786 ! CDKN1C [Term] -id: FPLX:CDKN2 +id: FPLX:000096 name: CDKN2 synonym: "CDKN2" EXACT [] -is_a: FPLX:CDKN -inverse_is_a: HGNC:CDKN2A -inverse_is_a: HGNC:CDKN2B -inverse_is_a: HGNC:CDKN2C -inverse_is_a: HGNC:CDKN2D +is_a: FPLX:000094 ! CDKN +relationship: inverse_is_a HGNC:1787 ! CDKN2A +relationship: inverse_is_a HGNC:1788 ! CDKN2B +relationship: inverse_is_a HGNC:1789 ! CDKN2C +relationship: inverse_is_a HGNC:1790 ! CDKN2D [Term] -id: FPLX:CEBP +id: FPLX:000097 name: CEBP synonym: "C/EBP" EXACT [] synonym: "CCAAT/enhancer binding protein" EXACT [] xref: BEL:"CEBP Family" xref: NEXTPROT-FAMILY:00406 -is_a: FPLX:root -inverse_is_a: HGNC:CEBPA -inverse_is_a: HGNC:CEBPB -inverse_is_a: HGNC:CEBPD -inverse_is_a: HGNC:CEBPG -inverse_is_a: HGNC:CEBPE +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:1833 ! CEBPA +relationship: inverse_is_a HGNC:1834 ! CEBPB +relationship: inverse_is_a HGNC:1835 ! CEBPD +relationship: inverse_is_a HGNC:1837 ! CEBPG +relationship: inverse_is_a HGNC:1836 ! CEBPE [Term] -id: FPLX:CHEK +id: FPLX:000098 name: CHEK synonym: "checkpoint kinase" EXACT [] synonym: "Chk1/2" EXACT [] xref: MEDSCAN:urn:agi-protfc:checkpoint%20kinase -is_a: FPLX:root -inverse_is_a: HGNC:CHEK1 -inverse_is_a: HGNC:CHEK2 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:1925 ! CHEK1 +relationship: inverse_is_a HGNC:16627 ! CHEK2 [Term] -id: FPLX:Chemokine +id: FPLX:000099 name: Chemokine synonym: "chemokine" EXACT [] synonym: "chemokines" EXACT [] xref: MEDSCAN:urn:agi-aopfc:0000391 xref: NCIT:C20466 -is_a: FPLX:root -inverse_is_a: FPLX:CXCL_ELR_negative -inverse_is_a: FPLX:CXCL_ELR_positive +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a FPLX:000128 ! CXCL_ELR_negative +relationship: inverse_is_a FPLX:000129 ! CXCL_ELR_positive [Term] -id: FPLX:Chemokine_receptor +id: FPLX:000100 name: Chemokine-receptor synonym: "chemoattractant receptor" EXACT [] xref: BEL:"Chemokine Receptor Family" -is_a: FPLX:root -inverse_is_a: HGNC:ACKR2 -inverse_is_a: HGNC:CCR1 -inverse_is_a: HGNC:CCR10 -inverse_is_a: HGNC:CCR2 -inverse_is_a: HGNC:CCR3 -inverse_is_a: HGNC:CCR4 -inverse_is_a: HGNC:CCR5 -inverse_is_a: HGNC:CCR6 -inverse_is_a: HGNC:CCR7 -inverse_is_a: HGNC:CCR8 -inverse_is_a: HGNC:CCR9 -inverse_is_a: HGNC:ACKR4 -inverse_is_a: HGNC:CCRL2 -inverse_is_a: HGNC:CX3CR1 -inverse_is_a: HGNC:CXCR1 -inverse_is_a: HGNC:CXCR2 -inverse_is_a: HGNC:CXCR3 -inverse_is_a: HGNC:CXCR4 -inverse_is_a: HGNC:CXCR5 -inverse_is_a: HGNC:CXCR6 -inverse_is_a: HGNC:ACKR3 -inverse_is_a: HGNC:XCR1 - -[Term] -id: FPLX:Cholinesterase +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:1565 ! ACKR2 +relationship: inverse_is_a HGNC:1602 ! CCR1 +relationship: inverse_is_a HGNC:4474 ! CCR10 +relationship: inverse_is_a HGNC:1603 ! CCR2 +relationship: inverse_is_a HGNC:1604 ! CCR3 +relationship: inverse_is_a HGNC:1605 ! CCR4 +relationship: inverse_is_a HGNC:1606 ! CCR5 +relationship: inverse_is_a HGNC:1607 ! CCR6 +relationship: inverse_is_a HGNC:1608 ! CCR7 +relationship: inverse_is_a HGNC:1609 ! CCR8 +relationship: inverse_is_a HGNC:1610 ! CCR9 +relationship: inverse_is_a HGNC:1611 ! ACKR4 +relationship: inverse_is_a HGNC:1612 ! CCRL2 +relationship: inverse_is_a HGNC:2558 ! CX3CR1 +relationship: inverse_is_a HGNC:6026 ! CXCR1 +relationship: inverse_is_a HGNC:6027 ! CXCR2 +relationship: inverse_is_a HGNC:4540 ! CXCR3 +relationship: inverse_is_a HGNC:2561 ! CXCR4 +relationship: inverse_is_a HGNC:1060 ! CXCR5 +relationship: inverse_is_a HGNC:16647 ! CXCR6 +relationship: inverse_is_a HGNC:23692 ! ACKR3 +relationship: inverse_is_a HGNC:1625 ! XCR1 + +[Term] +id: FPLX:000101 name: Cholinesterase synonym: "choline esterase" EXACT [] synonym: "cholinesterase" EXACT [] @@ -1670,44 +1690,44 @@ xref: IP:IPR000997 xref: IP:IPR014788 xref: RE:R-HSA-2990868 xref: RE:R-HSA-3640837 -is_a: FPLX:root -inverse_is_a: HGNC:ACHE -inverse_is_a: HGNC:BCHE +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:108 ! ACHE +relationship: inverse_is_a HGNC:983 ! BCHE [Term] -id: FPLX:CHRM +id: FPLX:000102 name: CHRM synonym: "acetylcholine receptor" EXACT [] xref: BEL:"CHRM Family" xref: IP:IPR000995 -is_a: FPLX:root -inverse_is_a: HGNC:CHRM1 -inverse_is_a: HGNC:CHRM2 -inverse_is_a: HGNC:CHRM3 -inverse_is_a: HGNC:CHRM4 -inverse_is_a: HGNC:CHRM5 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:1950 ! CHRM1 +relationship: inverse_is_a HGNC:1951 ! CHRM2 +relationship: inverse_is_a HGNC:1952 ! CHRM3 +relationship: inverse_is_a HGNC:1953 ! CHRM4 +relationship: inverse_is_a HGNC:1954 ! CHRM5 [Term] -id: FPLX:CHRN +id: FPLX:000103 name: CHRN synonym: "nAChR" EXACT [] synonym: "nicotine class acetylcholine receptors" EXACT [] synonym: "nicotinic acetylcholine receptor" EXACT [] xref: BEL:"CHRN Complex" xref: GO:0016904 -is_a: FPLX:root -has_part: HGNC:CHRNA2 -has_part: HGNC:CHRNA3 -has_part: HGNC:CHRNA4 -has_part: HGNC:CHRNA5 -has_part: HGNC:CHRNA6 -has_part: HGNC:CHRNA7 -has_part: HGNC:CHRNB2 -has_part: HGNC:CHRNB3 -has_part: HGNC:CHRNB4 - -[Term] -id: FPLX:CK2 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:1956 ! CHRNA2 +relationship: has_part HGNC:1957 ! CHRNA3 +relationship: has_part HGNC:1958 ! CHRNA4 +relationship: has_part HGNC:1959 ! CHRNA5 +relationship: has_part HGNC:15963 ! CHRNA6 +relationship: has_part HGNC:1960 ! CHRNA7 +relationship: has_part HGNC:1962 ! CHRNB2 +relationship: has_part HGNC:1963 ! CHRNB3 +relationship: has_part HGNC:1964 ! CHRNB4 + +[Term] +id: FPLX:000104 name: CK2 synonym: "casein kinase 2" EXACT [] synonym: "casein kinase II complex" EXACT [] @@ -1719,13 +1739,13 @@ xref: NCIT:C107559 xref: NEXTPROT-FAMILY:03101 xref: RE:R-HSA-201711 xref: RE:R-HSA-6805066 -is_a: FPLX:root -has_part: HGNC:CSNK2A1 -has_part: HGNC:CSNK2A2 -has_part: HGNC:CSNK2B +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:2457 ! CSNK2A1 +relationship: has_part HGNC:2459 ! CSNK2A2 +relationship: has_part HGNC:2460 ! CSNK2B [Term] -id: FPLX:Clathrin +id: FPLX:000105 name: Clathrin synonym: "clathrin coat" EXACT [] synonym: "clathrin" EXACT [] @@ -1734,33 +1754,33 @@ xref: GO:0016190 xref: RE:R-HSA-5138439 xref: RE:R-HSA-5138447 xref: RE:R-HSA-5333713 -is_a: FPLX:root -has_part: HGNC:CLTA -has_part: HGNC:CLTB -has_part: HGNC:CLTC +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:2090 ! CLTA +relationship: has_part HGNC:2091 ! CLTB +relationship: has_part HGNC:2092 ! CLTC [Term] -id: FPLX:CNKSR +id: FPLX:000106 name: CNKSR synonym: "CNKSR" EXACT [] synonym: "connector enhancer of kinase suppressor of ras" EXACT [] xref: NEXTPROT-FAMILY:00653 -is_a: FPLX:root -inverse_is_a: HGNC:CNKSR1 -inverse_is_a: HGNC:CNKSR2 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:19700 ! CNKSR1 +relationship: inverse_is_a HGNC:19701 ! CNKSR2 [Term] -id: FPLX:Cofilin +id: FPLX:000107 name: Cofilin synonym: "cofilin" EXACT [] xref: IP:IPR017904 -is_a: FPLX:root -inverse_is_a: HGNC:CFL1 -inverse_is_a: HGNC:CFL2 -inverse_is_a: HGNC:DSTN +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:1874 ! CFL1 +relationship: inverse_is_a HGNC:1875 ! CFL2 +relationship: inverse_is_a HGNC:15750 ! DSTN [Term] -id: FPLX:Cohesin +id: FPLX:000108 name: Cohesin synonym: "cohesin complex" EXACT [] synonym: "cohesin" EXACT [] @@ -1768,12 +1788,12 @@ xref: BEL:"Cohesin Complex" xref: GO:0008278 xref: GO:0008279 xref: XFAM:PF00963 -is_a: FPLX:root -has_part: HGNC:RAD21 -has_part: HGNC:SMC3 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:9811 ! RAD21 +relationship: has_part HGNC:2468 ! SMC3 [Term] -id: FPLX:COL1 +id: FPLX:000109 name: COL1 synonym: "collagen type I" EXACT [] synonym: "Type I collagen" EXACT [] @@ -1794,12 +1814,12 @@ xref: RE:R-HSA-2396456 xref: RE:R-HSA-2396478 xref: RE:R-HSA-2399520 xref: RE:R-HSA-2428941 -is_a: FPLX:root -inverse_is_a: HGNC:COL1A1 -inverse_is_a: HGNC:COL1A2 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:2197 ! COL1A1 +relationship: inverse_is_a HGNC:2198 ! COL1A2 [Term] -id: FPLX:COL4 +id: FPLX:000110 name: COL4 synonym: "Col4" EXACT [] synonym: "ColIV" EXACT [] @@ -1811,16 +1831,16 @@ xref: GO:0005587 xref: IP:IPR001442 xref: NCIT:C16448 xref: RE:R-HSA-2127389 -is_a: FPLX:root -inverse_is_a: HGNC:COL4A1 -inverse_is_a: HGNC:COL4A2 -inverse_is_a: HGNC:COL4A3 -inverse_is_a: HGNC:COL4A4 -inverse_is_a: HGNC:COL4A5 -inverse_is_a: HGNC:COL4A6 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:2202 ! COL4A1 +relationship: inverse_is_a HGNC:2203 ! COL4A2 +relationship: inverse_is_a HGNC:2204 ! COL4A3 +relationship: inverse_is_a HGNC:2206 ! COL4A4 +relationship: inverse_is_a HGNC:2207 ! COL4A5 +relationship: inverse_is_a HGNC:2208 ! COL4A6 [Term] -id: FPLX:COL5 +id: FPLX:000111 name: COL5 synonym: "collagen type V" EXACT [] synonym: "type V collagen" EXACT [] @@ -1829,59 +1849,59 @@ xref: BEL:"COL5 Family" xref: GO:0005588 xref: RE:R-HSA-2127310 xref: RE:R-HSA-2127422 -is_a: FPLX:root -inverse_is_a: HGNC:COL5A1 -inverse_is_a: HGNC:COL5A2 -inverse_is_a: HGNC:COL5A3 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:2209 ! COL5A1 +relationship: inverse_is_a HGNC:2210 ! COL5A2 +relationship: inverse_is_a HGNC:14864 ! COL5A3 [Term] -id: FPLX:COLGALT +id: FPLX:000112 name: COLGALT synonym: "COLGALT" EXACT [] synonym: "Collagen beta(1-O)galactosyltransferase" EXACT [] synonym: "Collagen beta(1-O)galactosyltransferases" EXACT [] synonym: "collagen beta(1-O)galactosyltransferase" EXACT [] synonym: "collagen beta(1-O)galactosyltransferases" EXACT [] -is_a: FPLX:Glycosyltransferase -inverse_is_a: HGNC:COLGALT1 -inverse_is_a: HGNC:COLGALT2 +is_a: FPLX:000198 ! Glycosyltransferase +relationship: inverse_is_a HGNC:26182 ! COLGALT1 +relationship: inverse_is_a HGNC:16790 ! COLGALT2 [Term] -id: FPLX:COX +id: FPLX:000113 name: COX synonym: "Complex IV" EXACT [] synonym: "cytochrome c oxidase" EXACT [] xref: BEL:"Cytochrome C Oxidase Complex Muscle" xref: BEL:"Cytochrome C Oxidase Complex Non Muscle" xref: ECCODE:1.9.3.1 -is_a: FPLX:root -has_part: HGNC:COX5A -has_part: HGNC:COX5B -has_part: FPLX:COX4 -has_part: FPLX:COX6A -has_part: FPLX:COX6B -has_part: FPLX:COX7A -has_part: FPLX:COX7B -has_part: FPLX:COX8 -has_part: HGNC:COX10 -has_part: HGNC:COX11 -has_part: HGNC:COX15 -has_part: HGNC:COX17 - -[Term] -id: FPLX:COX4 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:2267 ! COX5A +relationship: has_part HGNC:2269 ! COX5B +relationship: has_part FPLX:000114 ! COX4 +relationship: has_part FPLX:000115 ! COX6A +relationship: has_part FPLX:000116 ! COX6B +relationship: has_part FPLX:000117 ! COX7A +relationship: has_part FPLX:000118 ! COX7B +relationship: has_part FPLX:000119 ! COX8 +relationship: has_part HGNC:2260 ! COX10 +relationship: has_part HGNC:2261 ! COX11 +relationship: has_part HGNC:2263 ! COX15 +relationship: has_part HGNC:2264 ! COX17 + +[Term] +id: FPLX:000114 name: COX4 synonym: "Cox4" EXACT [] xref: BEL:"COX4 Family" xref: IP:IPR004203 xref: IP:IPR013288 xref: XFAM:PF02936 -part_of: FPLX:COX -inverse_is_a: HGNC:COX4I1 -inverse_is_a: HGNC:COX4I2 +relationship: part_of FPLX:000113 ! COX +relationship: inverse_is_a HGNC:2265 ! COX4I1 +relationship: inverse_is_a HGNC:16232 ! COX4I2 [Term] -id: FPLX:COX6A +id: FPLX:000115 name: COX6A synonym: "COX6A" EXACT [] synonym: "Cox6a" EXACT [] @@ -1890,77 +1910,77 @@ xref: BEL:"COX6A Family" xref: IP:IPR001349 xref: IP:IPR018507 xref: XFAM:PF02046 -part_of: FPLX:COX -inverse_is_a: HGNC:COX6A1 -inverse_is_a: HGNC:COX6A2 +relationship: part_of FPLX:000113 ! COX +relationship: inverse_is_a HGNC:2277 ! COX6A1 +relationship: inverse_is_a HGNC:2279 ! COX6A2 [Term] -id: FPLX:COX6B +id: FPLX:000116 name: COX6B synonym: "Cox6b" EXACT [] xref: BEL:"COX6B Family" xref: XFAM:PF02297 -part_of: FPLX:COX -inverse_is_a: HGNC:COX6B1 -inverse_is_a: HGNC:COX6B2 +relationship: part_of FPLX:000113 ! COX +relationship: inverse_is_a HGNC:2280 ! COX6B1 +relationship: inverse_is_a HGNC:24380 ! COX6B2 [Term] -id: FPLX:COX7A +id: FPLX:000117 name: COX7A synonym: "COX7A" EXACT [] synonym: "Cox7a" EXACT [] xref: BEL:"COX7A Family" xref: XFAM:PF02238 -part_of: FPLX:COX -inverse_is_a: HGNC:COX7A1 -inverse_is_a: HGNC:COX7A2 +relationship: part_of FPLX:000113 ! COX +relationship: inverse_is_a HGNC:2287 ! COX7A1 +relationship: inverse_is_a HGNC:2288 ! COX7A2 [Term] -id: FPLX:COX7B +id: FPLX:000118 name: COX7B synonym: "Cox7b" EXACT [] xref: BEL:"COX7B Family" xref: IP:IPR008433 xref: IP:IPR023272 xref: XFAM:PF05392 -part_of: FPLX:COX -inverse_is_a: HGNC:COX7B -inverse_is_a: HGNC:COX7B2 +relationship: part_of FPLX:000113 ! COX +relationship: inverse_is_a HGNC:2291 ! COX7B +relationship: inverse_is_a HGNC:24381 ! COX7B2 [Term] -id: FPLX:COX8 +id: FPLX:000119 name: COX8 synonym: "Cox8" EXACT [] synonym: "cytochrome c oxidase subunit VIII" EXACT [] xref: BEL:"COX8 Family" xref: IP:IPR003205 xref: XFAM:PF02285 -part_of: FPLX:COX -inverse_is_a: HGNC:COX8A -inverse_is_a: HGNC:COX8C +relationship: part_of FPLX:000113 ! COX +relationship: inverse_is_a HGNC:2294 ! COX8A +relationship: inverse_is_a HGNC:24382 ! COX8C [Term] -id: FPLX:CREB +id: FPLX:000120 name: CREB synonym: "CREB family" EXACT [] synonym: "CREB" EXACT [] xref: BEL:"CREB Family" xref: MEDSCAN:urn:agi-aopfc:0000094 xref: NCIT:C17286 -is_a: FPLX:root -inverse_is_a: HGNC:CREB1 -inverse_is_a: HGNC:CREB3 -inverse_is_a: HGNC:CREB5 -inverse_is_a: HGNC:CREB3L1 -inverse_is_a: HGNC:CREB3L2 -inverse_is_a: HGNC:CREB3L3 -inverse_is_a: HGNC:CREB3L4 -inverse_is_a: HGNC:CREM -inverse_is_a: HGNC:ATF1 -inverse_is_a: HGNC:ATF2 - -[Term] -id: FPLX:CRISP +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:2345 ! CREB1 +relationship: inverse_is_a HGNC:2347 ! CREB3 +relationship: inverse_is_a HGNC:16844 ! CREB5 +relationship: inverse_is_a HGNC:18856 ! CREB3L1 +relationship: inverse_is_a HGNC:23720 ! CREB3L2 +relationship: inverse_is_a HGNC:18855 ! CREB3L3 +relationship: inverse_is_a HGNC:18854 ! CREB3L4 +relationship: inverse_is_a HGNC:2352 ! CREM +relationship: inverse_is_a HGNC:783 ! ATF1 +relationship: inverse_is_a HGNC:784 ! ATF2 + +[Term] +id: FPLX:000121 name: CRISP synonym: "CRISP" EXACT [] synonym: "CRISPs" EXACT [] @@ -1970,13 +1990,13 @@ xref: BEL:"CRISP Family" xref: IP:IPR013871 xref: IP:IPR034117 xref: XFAM:PF08562 -is_a: FPLX:root -inverse_is_a: HGNC:CRISP1 -inverse_is_a: HGNC:CRISP2 -inverse_is_a: HGNC:CRISP3 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:304 ! CRISP1 +relationship: inverse_is_a HGNC:12024 ! CRISP2 +relationship: inverse_is_a HGNC:16904 ! CRISP3 [Term] -id: FPLX:CRSP +id: FPLX:000122 name: CRSP synonym: "CRSP complex" EXACT [] synonym: "CRSP" EXACT [] @@ -1984,26 +2004,26 @@ synonym: "CRSP/Med complex" EXACT [] synonym: "transcriptional cofactor complex CRSP" EXACT [] xref: BEL:"CRSP Complex" xref: NCIT:C28687 -is_a: FPLX:root -has_part: HGNC:MED1 -has_part: HGNC:MED14 -has_part: HGNC:MED17 -has_part: HGNC:MED23 -has_part: HGNC:MED26 -has_part: HGNC:MED27 -has_part: HGNC:MED7 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:9234 ! MED1 +relationship: has_part HGNC:2370 ! MED14 +relationship: has_part HGNC:2375 ! MED17 +relationship: has_part HGNC:2372 ! MED23 +relationship: has_part HGNC:2376 ! MED26 +relationship: has_part HGNC:2377 ! MED27 +relationship: has_part HGNC:2378 ! MED7 [Term] -id: FPLX:CRTC +id: FPLX:000123 name: CRTC synonym: "CRTC" EXACT [] -is_a: FPLX:root -inverse_is_a: HGNC:CRTC1 -inverse_is_a: HGNC:CRTC2 -inverse_is_a: HGNC:CRTC3 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:16062 ! CRTC1 +relationship: inverse_is_a HGNC:27301 ! CRTC2 +relationship: inverse_is_a HGNC:26148 ! CRTC3 [Term] -id: FPLX:CSNK1 +id: FPLX:000124 name: CSNK1 synonym: "Casein kinase 1" EXACT [] synonym: "casein kinase 1" EXACT [] @@ -2012,17 +2032,17 @@ synonym: "CSNK1" EXACT [] xref: BEL:"CSNK1 Family" xref: MEDSCAN:urn:agi-protfc:casein%20kinase%20I xref: NEXTPROT-FAMILY:03083 -is_a: FPLX:root -inverse_is_a: HGNC:CSNK1A1 -inverse_is_a: HGNC:CSNK1A1L -inverse_is_a: HGNC:CSNK1D -inverse_is_a: HGNC:CSNK1E -inverse_is_a: HGNC:CSNK1G1 -inverse_is_a: HGNC:CSNK1G2 -inverse_is_a: HGNC:CSNK1G3 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:2451 ! CSNK1A1 +relationship: inverse_is_a HGNC:20289 ! CSNK1A1L +relationship: inverse_is_a HGNC:2452 ! CSNK1D +relationship: inverse_is_a HGNC:2453 ! CSNK1E +relationship: inverse_is_a HGNC:2454 ! CSNK1G1 +relationship: inverse_is_a HGNC:2455 ! CSNK1G2 +relationship: inverse_is_a HGNC:2456 ! CSNK1G3 [Term] -id: FPLX:CSNK2 +id: FPLX:000125 name: CSNK2 synonym: "CSNK2" EXACT [] xref: BEL:"CSNK2 Family" @@ -2030,12 +2050,12 @@ xref: RE:R-HSA-5083623 xref: RE:R-HSA-5083624 xref: RE:R-HSA-6805064 xref: RE:R-HSA-6805073 -is_a: FPLX:root -inverse_is_a: HGNC:CSNK2A1 -inverse_is_a: HGNC:CSNK2A2 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:2457 ! CSNK2A1 +relationship: inverse_is_a HGNC:2459 ! CSNK2A2 [Term] -id: FPLX:CTNNA +id: FPLX:000126 name: CTNNA synonym: "a-cathenin" EXACT [] synonym: "alpha catenin" EXACT [] @@ -2045,13 +2065,13 @@ synonym: "catenin α" EXACT [] synonym: "α catenin" EXACT [] synonym: "α-catenin" EXACT [] xref: BEL:"CTNNA Family" -is_a: FPLX:root -inverse_is_a: HGNC:CTNNA1 -inverse_is_a: HGNC:CTNNA2 -inverse_is_a: HGNC:CTNNA3 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:2509 ! CTNNA1 +relationship: inverse_is_a HGNC:2510 ! CTNNA2 +relationship: inverse_is_a HGNC:2511 ! CTNNA3 [Term] -id: FPLX:CUL +id: FPLX:000127 name: CUL synonym: "cullin proteins" EXACT [] synonym: "cullin" EXACT [] @@ -2061,50 +2081,50 @@ xref: MEDSCAN:urn:agi-complex:prophash-c3bac0781a4430da4cf6721b8f7537d9 xref: MEDSCAN:urn:agi-protfc:cullin xref: NEXTPROT-FAMILY:00787 xref: XFAM:PF00888 -is_a: FPLX:root -inverse_is_a: HGNC:CUL1 -inverse_is_a: HGNC:CUL2 -inverse_is_a: HGNC:CUL3 -inverse_is_a: HGNC:CUL4A -inverse_is_a: HGNC:CUL4B -inverse_is_a: HGNC:CUL5 -inverse_is_a: HGNC:CUL7 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:2551 ! CUL1 +relationship: inverse_is_a HGNC:2552 ! CUL2 +relationship: inverse_is_a HGNC:2553 ! CUL3 +relationship: inverse_is_a HGNC:2554 ! CUL4A +relationship: inverse_is_a HGNC:2555 ! CUL4B +relationship: inverse_is_a HGNC:2556 ! CUL5 +relationship: inverse_is_a HGNC:21024 ! CUL7 [Term] -id: FPLX:CXCL_ELR_negative +id: FPLX:000128 name: CXCL-ELR-negative synonym: "ELR (-) CXC chemokines" EXACT [] synonym: "ELR-negative CXC chemokine" EXACT [] synonym: "ELR-negative CXC family" EXACT [] synonym: "non-ELR-CXC chemokines" EXACT [] xref: BEL:"CXCL ELR-Negative Family" -is_a: FPLX:Chemokine -inverse_is_a: HGNC:CXCL10 -inverse_is_a: HGNC:CXCL11 -inverse_is_a: HGNC:CXCL12 -inverse_is_a: HGNC:CXCL13 -inverse_is_a: HGNC:CXCL14 -inverse_is_a: HGNC:CXCL9 -inverse_is_a: HGNC:PF4 +is_a: FPLX:000099 ! Chemokine +relationship: inverse_is_a HGNC:10637 ! CXCL10 +relationship: inverse_is_a HGNC:10638 ! CXCL11 +relationship: inverse_is_a HGNC:10672 ! CXCL12 +relationship: inverse_is_a HGNC:10639 ! CXCL13 +relationship: inverse_is_a HGNC:10640 ! CXCL14 +relationship: inverse_is_a HGNC:7098 ! CXCL9 +relationship: inverse_is_a HGNC:8861 ! PF4 [Term] -id: FPLX:CXCL_ELR_positive +id: FPLX:000129 name: CXCL-ELR-positive synonym: "ELR (+) CXC chemokines" EXACT [] synonym: "ELR-positive CXC chemokine" EXACT [] synonym: "ELR-positive CXC family" EXACT [] xref: BEL:"CXCL ELR-Positive Family" -is_a: FPLX:Chemokine -inverse_is_a: HGNC:CXCL1 -inverse_is_a: HGNC:CXCL2 -inverse_is_a: HGNC:CXCL3 -inverse_is_a: HGNC:CXCL5 -inverse_is_a: HGNC:CXCL6 -inverse_is_a: HGNC:CXCL8 -inverse_is_a: HGNC:PPBP +is_a: FPLX:000099 ! Chemokine +relationship: inverse_is_a HGNC:4602 ! CXCL1 +relationship: inverse_is_a HGNC:4603 ! CXCL2 +relationship: inverse_is_a HGNC:4604 ! CXCL3 +relationship: inverse_is_a HGNC:10642 ! CXCL5 +relationship: inverse_is_a HGNC:10643 ! CXCL6 +relationship: inverse_is_a HGNC:6025 ! CXCL8 +relationship: inverse_is_a HGNC:9240 ! PPBP [Term] -id: FPLX:Cyclin +id: FPLX:000130 name: Cyclin synonym: "cyclin family" EXACT [] synonym: "Cyclin" EXACT [] @@ -2113,34 +2133,34 @@ synonym: "cyclins" EXACT [] xref: MEDSCAN:urn:agi-protfc:cyclin xref: NCIT:C17349 xref: NEXTPROT-FAMILY:00815 -is_a: FPLX:root -inverse_is_a: HGNC:CCNB1 -inverse_is_a: HGNC:CCNB2 -inverse_is_a: HGNC:CCNB3 -inverse_is_a: HGNC:CCNC -inverse_is_a: HGNC:CCNF -inverse_is_a: HGNC:CCNG1 -inverse_is_a: HGNC:CCNG2 -inverse_is_a: HGNC:CCNH -inverse_is_a: HGNC:CCNI -inverse_is_a: HGNC:CCNI2 -inverse_is_a: HGNC:CCNJ -inverse_is_a: HGNC:CCNJL -inverse_is_a: HGNC:CCNK -inverse_is_a: HGNC:CCNL1 -inverse_is_a: HGNC:CCNL2 -inverse_is_a: HGNC:CCNO -inverse_is_a: HGNC:CCNT1 -inverse_is_a: HGNC:CCNT2 -inverse_is_a: HGNC:CCNY -inverse_is_a: HGNC:CCNYL1 -inverse_is_a: HGNC:CCNYL3 -inverse_is_a: FPLX:Cyclin_A -inverse_is_a: FPLX:Cyclin_D -inverse_is_a: FPLX:Cyclin_E - -[Term] -id: FPLX:Cyclin_A +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:1579 ! CCNB1 +relationship: inverse_is_a HGNC:1580 ! CCNB2 +relationship: inverse_is_a HGNC:18709 ! CCNB3 +relationship: inverse_is_a HGNC:1581 ! CCNC +relationship: inverse_is_a HGNC:1591 ! CCNF +relationship: inverse_is_a HGNC:1592 ! CCNG1 +relationship: inverse_is_a HGNC:1593 ! CCNG2 +relationship: inverse_is_a HGNC:1594 ! CCNH +relationship: inverse_is_a HGNC:1595 ! CCNI +relationship: inverse_is_a HGNC:33869 ! CCNI2 +relationship: inverse_is_a HGNC:23434 ! CCNJ +relationship: inverse_is_a HGNC:25876 ! CCNJL +relationship: inverse_is_a HGNC:1596 ! CCNK +relationship: inverse_is_a HGNC:20569 ! CCNL1 +relationship: inverse_is_a HGNC:20570 ! CCNL2 +relationship: inverse_is_a HGNC:18576 ! CCNO +relationship: inverse_is_a HGNC:1599 ! CCNT1 +relationship: inverse_is_a HGNC:1600 ! CCNT2 +relationship: inverse_is_a HGNC:23354 ! CCNY +relationship: inverse_is_a HGNC:26868 ! CCNYL1 +relationship: inverse_is_a HGNC:33206 ! CCNYL3 +relationship: inverse_is_a FPLX:000131 ! Cyclin_A +relationship: inverse_is_a FPLX:000132 ! Cyclin_D +relationship: inverse_is_a FPLX:000133 ! Cyclin_E + +[Term] +id: FPLX:000131 name: Cyclin-A synonym: "Cyclin A" EXACT [] synonym: "cyclin A" EXACT [] @@ -2151,12 +2171,12 @@ xref: RE:R-HSA-174074 xref: RE:R-HSA-5696998 xref: RE:R-HSA-6783051 xref: RE:R-HSA-75202 -is_a: FPLX:Cyclin -inverse_is_a: HGNC:CCNA1 -inverse_is_a: HGNC:CCNA2 +is_a: FPLX:000130 ! Cyclin +relationship: inverse_is_a HGNC:1577 ! CCNA1 +relationship: inverse_is_a HGNC:1578 ! CCNA2 [Term] -id: FPLX:Cyclin_D +id: FPLX:000132 name: Cyclin-D synonym: "Cyclin D" EXACT [] xref: BEL:"CCND Family" @@ -2166,13 +2186,13 @@ xref: NEXTPROT-FAMILY:00818 xref: RE:R-HSA-182582 xref: RE:R-HSA-182700 xref: RE:R-HSA-8938866 -is_a: FPLX:Cyclin -inverse_is_a: HGNC:CCND1 -inverse_is_a: HGNC:CCND2 -inverse_is_a: HGNC:CCND3 +is_a: FPLX:000130 ! Cyclin +relationship: inverse_is_a HGNC:1582 ! CCND1 +relationship: inverse_is_a HGNC:1583 ! CCND2 +relationship: inverse_is_a HGNC:1585 ! CCND3 [Term] -id: FPLX:Cyclin_E +id: FPLX:000133 name: Cyclin-E synonym: "cyclin E" EXACT [] xref: BEL:"CCNE Family" @@ -2183,54 +2203,54 @@ xref: RE:R-HSA-157462 xref: RE:R-HSA-187493 xref: RE:R-HSA-6813837 xref: RE:R-HSA-68373 -is_a: FPLX:Cyclin -inverse_is_a: HGNC:CCNE1 -inverse_is_a: HGNC:CCNE2 +is_a: FPLX:000130 ! Cyclin +relationship: inverse_is_a HGNC:1589 ! CCNE1 +relationship: inverse_is_a HGNC:1590 ! CCNE2 [Term] -id: FPLX:Cyclophilin +id: FPLX:000134 name: Cyclophilin synonym: "cyclophilin" EXACT [] synonym: "cyclophilins" EXACT [] xref: BEL:"Cyclophilin Family" xref: MEDSCAN:urn:agi-protfc:cyclophilins -is_a: FPLX:root -inverse_is_a: HGNC:CWC27 -inverse_is_a: HGNC:PPIA -inverse_is_a: HGNC:PPIB -inverse_is_a: HGNC:PPIC -inverse_is_a: HGNC:PPID -inverse_is_a: HGNC:PPIE -inverse_is_a: HGNC:PPIF -inverse_is_a: HGNC:PPIH -inverse_is_a: HGNC:PPIL1 -inverse_is_a: HGNC:PPIL2 -inverse_is_a: HGNC:PPIL3 -inverse_is_a: HGNC:PPIL4 -inverse_is_a: HGNC:PPIL6 -inverse_is_a: HGNC:PPWD1 -inverse_is_a: HGNC:PPIAL4A -inverse_is_a: HGNC:PPIAL4C -inverse_is_a: HGNC:PPIAL4G - -[Term] -id: FPLX:Cytoplasmic_dynein +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:10664 ! CWC27 +relationship: inverse_is_a HGNC:9253 ! PPIA +relationship: inverse_is_a HGNC:9255 ! PPIB +relationship: inverse_is_a HGNC:9256 ! PPIC +relationship: inverse_is_a HGNC:9257 ! PPID +relationship: inverse_is_a HGNC:9258 ! PPIE +relationship: inverse_is_a HGNC:9259 ! PPIF +relationship: inverse_is_a HGNC:14651 ! PPIH +relationship: inverse_is_a HGNC:9260 ! PPIL1 +relationship: inverse_is_a HGNC:9261 ! PPIL2 +relationship: inverse_is_a HGNC:9262 ! PPIL3 +relationship: inverse_is_a HGNC:15702 ! PPIL4 +relationship: inverse_is_a HGNC:21557 ! PPIL6 +relationship: inverse_is_a HGNC:28954 ! PPWD1 +relationship: inverse_is_a HGNC:24369 ! PPIAL4A +relationship: inverse_is_a HGNC:33995 ! PPIAL4C +relationship: inverse_is_a HGNC:33996 ! PPIAL4G + +[Term] +id: FPLX:000135 name: Cytoplasmic-dynein synonym: "cytoplasmic dynein" EXACT [] xref: BEL:"Cytoplasmic Dynein Complex" xref: GO:0005868 -is_a: FPLX:root -has_part: HGNC:DYNC1H1 -has_part: HGNC:DYNC1I1 -has_part: HGNC:DYNC1I2 -has_part: HGNC:DYNC1LI1 -has_part: HGNC:DYNC1LI2 -has_part: HGNC:DYNLL1 -has_part: HGNC:DYNLRB1 -has_part: HGNC:DYNLRB2 - -[Term] -id: FPLX:DDR +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:2961 ! DYNC1H1 +relationship: has_part HGNC:2963 ! DYNC1I1 +relationship: has_part HGNC:2964 ! DYNC1I2 +relationship: has_part HGNC:18745 ! DYNC1LI1 +relationship: has_part HGNC:2966 ! DYNC1LI2 +relationship: has_part HGNC:15476 ! DYNLL1 +relationship: has_part HGNC:15468 ! DYNLRB1 +relationship: has_part HGNC:15467 ! DYNLRB2 + +[Term] +id: FPLX:000136 name: DDR synonym: "discoidin domain receptor family" EXACT [] synonym: "discoidin domain receptors" EXACT [] @@ -2238,27 +2258,27 @@ synonym: "discoidin domain-containing receptor" EXACT [] xref: BEL:"DDR Family" xref: MEDSCAN:urn:agi-aopfc:0000252 xref: XFAM:PF08841 -is_a: FPLX:root -inverse_is_a: HGNC:DDR1 -inverse_is_a: HGNC:DDR2 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:2730 ! DDR1 +relationship: inverse_is_a HGNC:2731 ! DDR2 [Term] -id: FPLX:Death_receptor +id: FPLX:000137 name: Death-receptor synonym: "death receptor" EXACT [] synonym: "death receptors" EXACT [] xref: GO:0005035 -is_a: FPLX:root -inverse_is_a: HGNC:TNFRSF1A -inverse_is_a: HGNC:TNFRSF1B -inverse_is_a: HGNC:TNFRSF10A -inverse_is_a: HGNC:TNFRSF10B -inverse_is_a: HGNC:TNFRSF10C -inverse_is_a: HGNC:TNFRSF10D -inverse_is_a: HGNC:FAS +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:11916 ! TNFRSF1A +relationship: inverse_is_a HGNC:11917 ! TNFRSF1B +relationship: inverse_is_a HGNC:11904 ! TNFRSF10A +relationship: inverse_is_a HGNC:11905 ! TNFRSF10B +relationship: inverse_is_a HGNC:11906 ! TNFRSF10C +relationship: inverse_is_a HGNC:11907 ! TNFRSF10D +relationship: inverse_is_a HGNC:11920 ! FAS [Term] -id: FPLX:Desmoglein +id: FPLX:000138 name: Desmoglein synonym: "desmoglein" EXACT [] synonym: "desmogleins" EXACT [] @@ -2267,14 +2287,14 @@ xref: IP:IPR009123 xref: MEDSCAN:urn:agi-protfc:desmoglein xref: RE:R-HSA-6814694 xref: RE:R-HSA-8847714 -is_a: FPLX:root -inverse_is_a: HGNC:DSG1 -inverse_is_a: HGNC:DSG2 -inverse_is_a: HGNC:DSG3 -inverse_is_a: HGNC:DSG4 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:3048 ! DSG1 +relationship: inverse_is_a HGNC:3049 ! DSG2 +relationship: inverse_is_a HGNC:3050 ! DSG3 +relationship: inverse_is_a HGNC:21307 ! DSG4 [Term] -id: FPLX:DGC +id: FPLX:000139 name: DGC synonym: "DGC" EXACT [] synonym: "dystrophin glycoprotein complex" EXACT [] @@ -2283,26 +2303,26 @@ synonym: "dystrophin-associated glycoprotein complex" EXACT [] synonym: "dystrophin-glycoprotein complex" EXACT [] xref: BEL:"Dystrophin Associated Glycoprotein Complex" xref: GO:0016010 -is_a: FPLX:root -has_part: HGNC:DAG1 -has_part: HGNC:DMD -has_part: HGNC:DTNA -has_part: HGNC:DTNB -has_part: HGNC:NOS1 -has_part: HGNC:SGCA -has_part: HGNC:SGCB -has_part: HGNC:SGCD -has_part: HGNC:SGCE -has_part: HGNC:SGCZ -has_part: HGNC:SNTA1 -has_part: HGNC:SNTB1 -has_part: HGNC:SNTG1 -has_part: HGNC:SNTG2 -has_part: HGNC:SSPN -has_part: HGNC:UTRN - -[Term] -id: FPLX:DGK +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:2666 ! DAG1 +relationship: has_part HGNC:2928 ! DMD +relationship: has_part HGNC:3057 ! DTNA +relationship: has_part HGNC:3058 ! DTNB +relationship: has_part HGNC:7872 ! NOS1 +relationship: has_part HGNC:10805 ! SGCA +relationship: has_part HGNC:10806 ! SGCB +relationship: has_part HGNC:10807 ! SGCD +relationship: has_part HGNC:10808 ! SGCE +relationship: has_part HGNC:14075 ! SGCZ +relationship: has_part HGNC:11167 ! SNTA1 +relationship: has_part HGNC:11168 ! SNTB1 +relationship: has_part HGNC:13740 ! SNTG1 +relationship: has_part HGNC:13741 ! SNTG2 +relationship: has_part HGNC:11322 ! SSPN +relationship: has_part HGNC:12635 ! UTRN + +[Term] +id: FPLX:000140 name: DGK synonym: "DAG kinase" EXACT [] synonym: "DGK" EXACT [] @@ -2312,20 +2332,20 @@ xref: BEL:"DGK Family" xref: ECCODE:2.7.1.107 xref: IP:IPR000756 xref: RE:R-HSA-426070 -is_a: FPLX:root -inverse_is_a: HGNC:DGKA -inverse_is_a: HGNC:DGKB -inverse_is_a: HGNC:DGKD -inverse_is_a: HGNC:DGKG -inverse_is_a: HGNC:DGKH -inverse_is_a: HGNC:DGKQ -inverse_is_a: HGNC:DGKZ -inverse_is_a: HGNC:DGKE -inverse_is_a: HGNC:DGKI -inverse_is_a: HGNC:DGKK - -[Term] -id: FPLX:DNA_polymerase_delta +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:2849 ! DGKA +relationship: inverse_is_a HGNC:2850 ! DGKB +relationship: inverse_is_a HGNC:2851 ! DGKD +relationship: inverse_is_a HGNC:2853 ! DGKG +relationship: inverse_is_a HGNC:2854 ! DGKH +relationship: inverse_is_a HGNC:2856 ! DGKQ +relationship: inverse_is_a HGNC:2857 ! DGKZ +relationship: inverse_is_a HGNC:2852 ! DGKE +relationship: inverse_is_a HGNC:2855 ! DGKI +relationship: inverse_is_a HGNC:32395 ! DGKK + +[Term] +id: FPLX:000141 name: DNA-polymerase-delta synonym: "DNA polymerase delta" EXACT [] synonym: "DNA polymerase δ" EXACT [] @@ -2337,14 +2357,14 @@ xref: BEL:"DNA Polymerase delta Complex" xref: GO:0043625 xref: NCIT:C16511 xref: RE:R-HSA-68450 -is_a: FPLX:root -has_part: HGNC:POLD1 -has_part: HGNC:POLD2 -has_part: HGNC:POLD3 -has_part: HGNC:POLD4 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:9175 ! POLD1 +relationship: has_part HGNC:9176 ! POLD2 +relationship: has_part HGNC:20932 ! POLD3 +relationship: has_part HGNC:14106 ! POLD4 [Term] -id: FPLX:DNM +id: FPLX:000142 name: DNM synonym: "dynamin family" EXACT [] synonym: "dynamin" EXACT [] @@ -2353,13 +2373,13 @@ xref: RE:R-HSA-2213185 xref: RE:R-HSA-446847 xref: RE:R-HSA-8868235 xref: RE:R-HSA-8868609 -is_a: FPLX:root -inverse_is_a: HGNC:DNM1 -inverse_is_a: HGNC:DNM2 -inverse_is_a: HGNC:DNM3 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:2972 ! DNM1 +relationship: inverse_is_a HGNC:2974 ! DNM2 +relationship: inverse_is_a HGNC:29125 ! DNM3 [Term] -id: FPLX:DRD +id: FPLX:000143 name: DRD synonym: "dopamine receptor" EXACT [] synonym: "dopamine receptors" EXACT [] @@ -2367,27 +2387,27 @@ xref: BEL:"DRD Family" xref: GO:0004952 xref: IP:IPR000929 xref: NCIT:C17066 -is_a: FPLX:root -inverse_is_a: HGNC:DRD1 -inverse_is_a: HGNC:DRD2 -inverse_is_a: HGNC:DRD3 -inverse_is_a: HGNC:DRD4 -inverse_is_a: HGNC:DRD5 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:3020 ! DRD1 +relationship: inverse_is_a HGNC:3023 ! DRD2 +relationship: inverse_is_a HGNC:3024 ! DRD3 +relationship: inverse_is_a HGNC:3025 ! DRD4 +relationship: inverse_is_a HGNC:3026 ! DRD5 [Term] -id: FPLX:DUSP +id: FPLX:000144 name: DUSP synonym: "DUSP" EXACT [] -is_a: FPLX:root -inverse_is_a: HGNC:DUSP1 -inverse_is_a: HGNC:DUSP2 -inverse_is_a: HGNC:DUSP3 -inverse_is_a: HGNC:DUSP4 -inverse_is_a: HGNC:DUSP5 -inverse_is_a: HGNC:DUSP6 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:3064 ! DUSP1 +relationship: inverse_is_a HGNC:3068 ! DUSP2 +relationship: inverse_is_a HGNC:3069 ! DUSP3 +relationship: inverse_is_a HGNC:3070 ! DUSP4 +relationship: inverse_is_a HGNC:3071 ! DUSP5 +relationship: inverse_is_a HGNC:3072 ! DUSP6 [Term] -id: FPLX:DVL +id: FPLX:000145 name: DVL synonym: "dishevelled" EXACT [] synonym: "Dvl" EXACT [] @@ -2402,52 +2422,52 @@ xref: RE:R-HSA-3858467 xref: RE:R-HSA-3858479 xref: RE:R-HSA-4652685 xref: SIGNOR:SIGNOR-PF10 -is_a: FPLX:root -inverse_is_a: HGNC:DVL1 -inverse_is_a: HGNC:DVL2 -inverse_is_a: HGNC:DVL3 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:3084 ! DVL1 +relationship: inverse_is_a HGNC:3086 ! DVL2 +relationship: inverse_is_a HGNC:3087 ! DVL3 [Term] -id: FPLX:DYRK +id: FPLX:000146 name: DYRK synonym: "DYRK" EXACT [] xref: NEXTPROT-FAMILY:03091 -is_a: FPLX:root -inverse_is_a: HGNC:DYRK1A -inverse_is_a: HGNC:DYRK1B -inverse_is_a: HGNC:DYRK2 -inverse_is_a: HGNC:DYRK3 -inverse_is_a: HGNC:DYRK4 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:3091 ! DYRK1A +relationship: inverse_is_a HGNC:3092 ! DYRK1B +relationship: inverse_is_a HGNC:3093 ! DYRK2 +relationship: inverse_is_a HGNC:3094 ! DYRK3 +relationship: inverse_is_a HGNC:3095 ! DYRK4 [Term] -id: FPLX:E2F +id: FPLX:000147 name: E2F synonym: "E2F" EXACT [] xref: BEL:"E2F Family" xref: IP:IPR015633 xref: MEDSCAN:urn:agi-aopfc:0000099 xref: MEDSCAN:urn:agi-complex:prophash-40bc2e4348830d6f7bdacd573fd7c388 -is_a: FPLX:root -inverse_is_a: HGNC:E2F1 -inverse_is_a: HGNC:E2F2 -inverse_is_a: HGNC:E2F3 -inverse_is_a: HGNC:E2F4 -inverse_is_a: HGNC:E2F5 -inverse_is_a: HGNC:E2F6 -inverse_is_a: HGNC:E2F7 -inverse_is_a: HGNC:E2F8 - -[Term] -id: FPLX:E3_Ub_ligase +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:3113 ! E2F1 +relationship: inverse_is_a HGNC:3114 ! E2F2 +relationship: inverse_is_a HGNC:3115 ! E2F3 +relationship: inverse_is_a HGNC:3118 ! E2F4 +relationship: inverse_is_a HGNC:3119 ! E2F5 +relationship: inverse_is_a HGNC:3120 ! E2F6 +relationship: inverse_is_a HGNC:23820 ! E2F7 +relationship: inverse_is_a HGNC:24727 ! E2F8 + +[Term] +id: FPLX:000148 name: E3-Ub-ligase synonym: "E3 ubiquitin ligase" EXACT [] synonym: "E3" EXACT [] xref: XFAM:PF12483 xref: RE:R-HSA-976075 -is_a: FPLX:root +is_a: FPLX:000000 ! famplex [Term] -id: FPLX:EDN +id: FPLX:000149 name: EDN synonym: "endothelin" EXACT [] synonym: "endothelins" EXACT [] @@ -2458,110 +2478,110 @@ xref: IP:IPR020475 xref: MEDSCAN:urn:agi-protfc:endothelin xref: XFAM:PF00322 xref: RE:R-HSA-388544 -is_a: FPLX:root -inverse_is_a: HGNC:EDN1 -inverse_is_a: HGNC:EDN2 -inverse_is_a: HGNC:EDN3 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:3176 ! EDN1 +relationship: inverse_is_a HGNC:3177 ! EDN2 +relationship: inverse_is_a HGNC:3178 ! EDN3 [Term] -id: FPLX:EGFR_ligand +id: FPLX:000150 name: EGFR-ligand synonym: "EGFR ligand" EXACT [] synonym: "EGFR ligands" EXACT [] xref: BEL:"EGFR Ligand Family" xref: GO:0005154 -is_a: FPLX:root -inverse_is_a: HGNC:AREG -inverse_is_a: HGNC:EGF -inverse_is_a: HGNC:TGFA -inverse_is_a: HGNC:HBEGF -inverse_is_a: HGNC:BTC -inverse_is_a: HGNC:EREG -inverse_is_a: HGNC:EPGN +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:651 ! AREG +relationship: inverse_is_a HGNC:3229 ! EGF +relationship: inverse_is_a HGNC:11765 ! TGFA +relationship: inverse_is_a HGNC:3059 ! HBEGF +relationship: inverse_is_a HGNC:1121 ! BTC +relationship: inverse_is_a HGNC:3443 ! EREG +relationship: inverse_is_a HGNC:17470 ! EPGN [Term] -id: FPLX:EGR +id: FPLX:000151 name: EGR synonym: "early growth response proteins" EXACT [] synonym: "EGR" EXACT [] xref: BEL:"EGR Family" -is_a: FPLX:root -inverse_is_a: HGNC:EGR1 -inverse_is_a: HGNC:EGR2 -inverse_is_a: HGNC:EGR3 -inverse_is_a: HGNC:EGR4 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:3238 ! EGR1 +relationship: inverse_is_a HGNC:3239 ! EGR2 +relationship: inverse_is_a HGNC:3240 ! EGR3 +relationship: inverse_is_a HGNC:3241 ! EGR4 [Term] -id: FPLX:EIF2B +id: FPLX:000152 name: EIF2B synonym: "EIF2B" EXACT [] synonym: "eIF2B" EXACT [] xref: BEL:"EIF2B Complex" xref: NCIT:C18162 xref: RE:R-HSA-72526 -is_a: FPLX:root -has_part: HGNC:EIF2B1 -has_part: HGNC:EIF2B2 -has_part: HGNC:EIF2B3 -has_part: HGNC:EIF2B4 -has_part: HGNC:EIF2B5 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:3257 ! EIF2B1 +relationship: has_part HGNC:3258 ! EIF2B2 +relationship: has_part HGNC:3259 ! EIF2B3 +relationship: has_part HGNC:3260 ! EIF2B4 +relationship: has_part HGNC:3261 ! EIF2B5 [Term] -id: FPLX:EIF4A +id: FPLX:000153 name: EIF4A synonym: "eIF4A" EXACT [] synonym: "eukaryotic initiation factor-4A" EXACT [] xref: BEL:"EIF4A Family" xref: NEXTPROT-FAMILY:00921 xref: RE:R-HSA-429842 -is_a: FPLX:root -inverse_is_a: HGNC:EIF4A1 -inverse_is_a: HGNC:EIF4A2 -inverse_is_a: HGNC:EIF4A3 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:3282 ! EIF4A1 +relationship: inverse_is_a HGNC:3284 ! EIF4A2 +relationship: inverse_is_a HGNC:18683 ! EIF4A3 [Term] -id: FPLX:EIF4EBP +id: FPLX:000154 name: EIF4EBP synonym: "4EBP" EXACT [] synonym: "initiation factor 4E binding proteins" EXACT [] xref: BEL:"EIF4EBP Family" xref: GO:0008190 xref: IP:IPR008606 -is_a: FPLX:root -inverse_is_a: HGNC:EIF4EBP1 -inverse_is_a: HGNC:EIF4EBP2 -inverse_is_a: HGNC:EIF4EBP3 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:3288 ! EIF4EBP1 +relationship: inverse_is_a HGNC:3289 ! EIF4EBP2 +relationship: inverse_is_a HGNC:3290 ! EIF4EBP3 [Term] -id: FPLX:EIF4G +id: FPLX:000155 name: EIF4G synonym: "eIF4G" EXACT [] xref: XFAM:PF02854 xref: RE:R-HSA-1678828 -is_a: FPLX:root -inverse_is_a: HGNC:EIF4G1 -inverse_is_a: HGNC:EIF4G2 -inverse_is_a: HGNC:EIF4G3 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:3296 ! EIF4G1 +relationship: inverse_is_a HGNC:3297 ! EIF4G2 +relationship: inverse_is_a HGNC:3298 ! EIF4G3 [Term] -id: FPLX:ELA +id: FPLX:000156 name: ELA synonym: "elastase" EXACT [] xref: BEL:"ELA Family" xref: NEXTPROT-FAMILY:02762 -is_a: FPLX:root -inverse_is_a: HGNC:AZU1 -inverse_is_a: HGNC:CELA1 -inverse_is_a: HGNC:CELA2A -inverse_is_a: HGNC:CELA2B -inverse_is_a: HGNC:CELA3A -inverse_is_a: HGNC:CELA3B -inverse_is_a: HGNC:CTRC -inverse_is_a: HGNC:ELANE -inverse_is_a: HGNC:PRTN3 - -[Term] -id: FPLX:ENO +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:913 ! AZU1 +relationship: inverse_is_a HGNC:3308 ! CELA1 +relationship: inverse_is_a HGNC:24609 ! CELA2A +relationship: inverse_is_a HGNC:29995 ! CELA2B +relationship: inverse_is_a HGNC:15944 ! CELA3A +relationship: inverse_is_a HGNC:15945 ! CELA3B +relationship: inverse_is_a HGNC:2523 ! CTRC +relationship: inverse_is_a HGNC:3309 ! ELANE +relationship: inverse_is_a HGNC:9495 ! PRTN3 + +[Term] +id: FPLX:000157 name: ENO synonym: "enolase" EXACT [] xref: BEL:"ENO Family" @@ -2569,14 +2589,14 @@ xref: IP:IPR000941 xref: IP:IPR020810 xref: IP:IPR020811 xref: NEXTPROT-FAMILY:01112 -is_a: FPLX:root -inverse_is_a: HGNC:ENO1 -inverse_is_a: HGNC:ENO2 -inverse_is_a: HGNC:ENO3 -inverse_is_a: HGNC:ENO4 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:3350 ! ENO1 +relationship: inverse_is_a HGNC:3353 ! ENO2 +relationship: inverse_is_a HGNC:3354 ! ENO3 +relationship: inverse_is_a HGNC:31670 ! ENO4 [Term] -id: FPLX:Ephrin_receptor +id: FPLX:000158 name: Ephrin-receptor synonym: "Eph receptor" EXACT [] synonym: "Eph receptors" EXACT [] @@ -2588,51 +2608,51 @@ xref: IP:IPR016257 xref: IP:IPR027936 xref: NCIT:C18606 xref: NEXTPROT-FAMILY:03124 -is_a: FPLX:root -inverse_is_a: HGNC:EPHA1 -inverse_is_a: HGNC:EPHA2 -inverse_is_a: HGNC:EPHA3 -inverse_is_a: HGNC:EPHA4 -inverse_is_a: HGNC:EPHA5 -inverse_is_a: HGNC:EPHA6 -inverse_is_a: HGNC:EPHA7 -inverse_is_a: HGNC:EPHA8 -inverse_is_a: HGNC:EPHB1 -inverse_is_a: HGNC:EPHB2 -inverse_is_a: HGNC:EPHB3 -inverse_is_a: HGNC:EPHB4 -inverse_is_a: HGNC:EPHB6 -inverse_is_a: HGNC:EPHA10 - -[Term] -id: FPLX:EPN +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:3385 ! EPHA1 +relationship: inverse_is_a HGNC:3386 ! EPHA2 +relationship: inverse_is_a HGNC:3387 ! EPHA3 +relationship: inverse_is_a HGNC:3388 ! EPHA4 +relationship: inverse_is_a HGNC:3389 ! EPHA5 +relationship: inverse_is_a HGNC:19296 ! EPHA6 +relationship: inverse_is_a HGNC:3390 ! EPHA7 +relationship: inverse_is_a HGNC:3391 ! EPHA8 +relationship: inverse_is_a HGNC:3392 ! EPHB1 +relationship: inverse_is_a HGNC:3393 ! EPHB2 +relationship: inverse_is_a HGNC:3394 ! EPHB3 +relationship: inverse_is_a HGNC:3395 ! EPHB4 +relationship: inverse_is_a HGNC:3396 ! EPHB6 +relationship: inverse_is_a HGNC:19987 ! EPHA10 + +[Term] +id: FPLX:000159 name: EPN synonym: "epsin" EXACT [] synonym: "epsins" EXACT [] xref: BEL:"EPN Family" xref: NEXTPROT-FAMILY:01121 -is_a: FPLX:root -inverse_is_a: HGNC:EPN1 -inverse_is_a: HGNC:EPN2 -inverse_is_a: HGNC:EPN3 -inverse_is_a: HGNC:CLINT1 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:21604 ! EPN1 +relationship: inverse_is_a HGNC:18639 ! EPN2 +relationship: inverse_is_a HGNC:18235 ! EPN3 +relationship: inverse_is_a HGNC:23186 ! CLINT1 [Term] -id: FPLX:ERBB +id: FPLX:000160 name: ERBB synonym: "ErbB" EXACT [] synonym: "erbB" EXACT [] xref: BEL:"EGFR/ERBB Family" xref: IP:IPR016245 xref: NCIT:C17763 -is_a: FPLX:root -inverse_is_a: HGNC:EGFR -inverse_is_a: HGNC:ERBB2 -inverse_is_a: HGNC:ERBB3 -inverse_is_a: HGNC:ERBB4 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:3236 ! EGFR +relationship: inverse_is_a HGNC:3430 ! ERBB2 +relationship: inverse_is_a HGNC:3431 ! ERBB3 +relationship: inverse_is_a HGNC:3432 ! ERBB4 [Term] -id: FPLX:ERK +id: FPLX:000161 name: ERK synonym: "ERK 1/2" EXACT [] synonym: "ERK MAPK" EXACT [] @@ -2666,22 +2686,22 @@ xref: RE:R-HSA-5674341 xref: RE:R-HSA-5675361 xref: RE:R-HSA-5675363 xref: SIGNOR:SIGNOR-PF1 -is_a: FPLX:MAPK -inverse_is_a: HGNC:MAPK1 -inverse_is_a: HGNC:MAPK3 +is_a: FPLX:000283 ! MAPK +relationship: inverse_is_a HGNC:6871 ! MAPK1 +relationship: inverse_is_a HGNC:6877 ! MAPK3 [Term] -id: FPLX:ESR +id: FPLX:000162 name: ESR synonym: "ER" EXACT [] synonym: "ESR" EXACT [] xref: BEL:"ESR Family" -is_a: FPLX:root -inverse_is_a: HGNC:ESR1 -inverse_is_a: HGNC:ESR2 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:3467 ! ESR1 +relationship: inverse_is_a HGNC:3468 ! ESR2 [Term] -id: FPLX:ETS +id: FPLX:000163 name: ETS synonym: "ETS" EXACT [] xref: BEL:"ETS Family" @@ -2690,12 +2710,12 @@ xref: XFAM:PF00178 xref: RE:R-HSA-3132719 xref: RE:R-HSA-3132724 xref: RE:R-HSA-3200029 -is_a: FPLX:root -inverse_is_a: HGNC:ETS1 -inverse_is_a: HGNC:ETS2 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:3488 ! ETS1 +relationship: inverse_is_a HGNC:3489 ! ETS2 [Term] -id: FPLX:EXOC +id: FPLX:000164 name: EXOC synonym: "EXOC" EXACT [] synonym: "exocyst complex" EXACT [] @@ -2703,58 +2723,58 @@ synonym: "exocyst" EXACT [] xref: GO:0000145 xref: RE:R-HSA-264974 xref: RE:R-HSA-5623453 -is_a: FPLX:root -has_part: HGNC:EXOC1 -has_part: HGNC:EXOC2 -has_part: HGNC:EXOC3 -has_part: HGNC:EXOC4 -has_part: HGNC:EXOC5 -has_part: HGNC:EXOC6 -has_part: HGNC:EXOC7 -has_part: HGNC:EXOC8 - -[Term] -id: FPLX:EXT +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:30380 ! EXOC1 +relationship: has_part HGNC:24968 ! EXOC2 +relationship: has_part HGNC:30378 ! EXOC3 +relationship: has_part HGNC:30389 ! EXOC4 +relationship: has_part HGNC:10696 ! EXOC5 +relationship: has_part HGNC:23196 ! EXOC6 +relationship: has_part HGNC:23214 ! EXOC7 +relationship: has_part HGNC:24659 ! EXOC8 + +[Term] +id: FPLX:000165 name: EXT synonym: "Exostosin glycosyltransferase family" EXACT [] synonym: "exostosin glycosyltransferase family" EXACT [] synonym: "EXT" EXACT [] -is_a: FPLX:Glycosyltransferase -inverse_is_a: HGNC:EXTL1 -inverse_is_a: HGNC:EXTL2 -inverse_is_a: HGNC:EXTL3 -inverse_is_a: HGNC:EXT1 -inverse_is_a: HGNC:EXT2 +is_a: FPLX:000198 ! Glycosyltransferase +relationship: inverse_is_a HGNC:3515 ! EXTL1 +relationship: inverse_is_a HGNC:3516 ! EXTL2 +relationship: inverse_is_a HGNC:3518 ! EXTL3 +relationship: inverse_is_a HGNC:3512 ! EXT1 +relationship: inverse_is_a HGNC:3513 ! EXT2 [Term] -id: FPLX:FANC +id: FPLX:000166 name: FANC synonym: "FANC proteins" EXACT [] synonym: "FANC" EXACT [] -is_a: FPLX:root -inverse_is_a: HGNC:FANCA -inverse_is_a: HGNC:FANCB -inverse_is_a: HGNC:FANCC -inverse_is_a: HGNC:BRCA2 -inverse_is_a: HGNC:FANCD2 -inverse_is_a: HGNC:FANCE -inverse_is_a: HGNC:FANCF -inverse_is_a: HGNC:FANCG -inverse_is_a: HGNC:FANCI -inverse_is_a: HGNC:BRIP1 -inverse_is_a: HGNC:FANCL -inverse_is_a: HGNC:FANCM -inverse_is_a: HGNC:PALB2 -inverse_is_a: HGNC:RAD51C -inverse_is_a: HGNC:SLX4 -inverse_is_a: HGNC:ERCC4 -inverse_is_a: HGNC:RAD51 -inverse_is_a: HGNC:BRCA1 -inverse_is_a: HGNC:UBE2T -inverse_is_a: HGNC:XRCC2 - -[Term] -id: FPLX:FGF +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:3582 ! FANCA +relationship: inverse_is_a HGNC:3583 ! FANCB +relationship: inverse_is_a HGNC:3584 ! FANCC +relationship: inverse_is_a HGNC:1101 ! BRCA2 +relationship: inverse_is_a HGNC:3585 ! FANCD2 +relationship: inverse_is_a HGNC:3586 ! FANCE +relationship: inverse_is_a HGNC:3587 ! FANCF +relationship: inverse_is_a HGNC:3588 ! FANCG +relationship: inverse_is_a HGNC:25568 ! FANCI +relationship: inverse_is_a HGNC:20473 ! BRIP1 +relationship: inverse_is_a HGNC:20748 ! FANCL +relationship: inverse_is_a HGNC:23168 ! FANCM +relationship: inverse_is_a HGNC:26144 ! PALB2 +relationship: inverse_is_a HGNC:9820 ! RAD51C +relationship: inverse_is_a HGNC:23845 ! SLX4 +relationship: inverse_is_a HGNC:3436 ! ERCC4 +relationship: inverse_is_a HGNC:9817 ! RAD51 +relationship: inverse_is_a HGNC:1100 ! BRCA1 +relationship: inverse_is_a HGNC:25009 ! UBE2T +relationship: inverse_is_a HGNC:12829 ! XRCC2 + +[Term] +id: FPLX:000167 name: FGF synonym: "FGF" EXACT [] xref: BEL:"FGF Family" @@ -2762,32 +2782,32 @@ xref: GO:0005162 xref: IP:IPR002209 xref: XFAM:PF00167 xref: SIGNOR:SIGNOR-PF8 -is_a: FPLX:root -inverse_is_a: HGNC:FGF1 -inverse_is_a: HGNC:FGF2 -inverse_is_a: HGNC:FGF3 -inverse_is_a: HGNC:FGF4 -inverse_is_a: HGNC:FGF5 -inverse_is_a: HGNC:FGF6 -inverse_is_a: HGNC:FGF7 -inverse_is_a: HGNC:FGF8 -inverse_is_a: HGNC:FGF9 -inverse_is_a: HGNC:FGF10 -inverse_is_a: HGNC:FGF11 -inverse_is_a: HGNC:FGF12 -inverse_is_a: HGNC:FGF13 -inverse_is_a: HGNC:FGF14 -inverse_is_a: HGNC:FGF16 -inverse_is_a: HGNC:FGF17 -inverse_is_a: HGNC:FGF18 -inverse_is_a: HGNC:FGF19 -inverse_is_a: HGNC:FGF20 -inverse_is_a: HGNC:FGF21 -inverse_is_a: HGNC:FGF22 -inverse_is_a: HGNC:FGF23 - -[Term] -id: FPLX:FGFR +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:3665 ! FGF1 +relationship: inverse_is_a HGNC:3676 ! FGF2 +relationship: inverse_is_a HGNC:3681 ! FGF3 +relationship: inverse_is_a HGNC:3682 ! FGF4 +relationship: inverse_is_a HGNC:3683 ! FGF5 +relationship: inverse_is_a HGNC:3684 ! FGF6 +relationship: inverse_is_a HGNC:3685 ! FGF7 +relationship: inverse_is_a HGNC:3686 ! FGF8 +relationship: inverse_is_a HGNC:3687 ! FGF9 +relationship: inverse_is_a HGNC:3666 ! FGF10 +relationship: inverse_is_a HGNC:3667 ! FGF11 +relationship: inverse_is_a HGNC:3668 ! FGF12 +relationship: inverse_is_a HGNC:3670 ! FGF13 +relationship: inverse_is_a HGNC:3671 ! FGF14 +relationship: inverse_is_a HGNC:3672 ! FGF16 +relationship: inverse_is_a HGNC:3673 ! FGF17 +relationship: inverse_is_a HGNC:3674 ! FGF18 +relationship: inverse_is_a HGNC:3675 ! FGF19 +relationship: inverse_is_a HGNC:3677 ! FGF20 +relationship: inverse_is_a HGNC:3678 ! FGF21 +relationship: inverse_is_a HGNC:3679 ! FGF22 +relationship: inverse_is_a HGNC:3680 ! FGF23 + +[Term] +id: FPLX:000168 name: FGFR synonym: "FGFR" EXACT [] xref: BEL:"FGFR Family" @@ -2795,15 +2815,15 @@ xref: GO:0005007 xref: IP:IPR016248 xref: NCIT:C17297 xref: SIGNOR:SIGNOR-PF23 -is_a: FPLX:root -inverse_is_a: HGNC:FGFR1 -inverse_is_a: HGNC:FGFR2 -inverse_is_a: HGNC:FGFR3 -inverse_is_a: HGNC:FGFR4 -inverse_is_a: HGNC:FGFRL1 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:3688 ! FGFR1 +relationship: inverse_is_a HGNC:3689 ! FGFR2 +relationship: inverse_is_a HGNC:3690 ! FGFR3 +relationship: inverse_is_a HGNC:3691 ! FGFR4 +relationship: inverse_is_a HGNC:3693 ! FGFRL1 [Term] -id: FPLX:Fibrinogen +id: FPLX:000169 name: Fibrinogen synonym: "fibrinogen" EXACT [] xref: BEL:"Fibrinogen Complex" @@ -2816,13 +2836,13 @@ xref: RE:R-HSA-139934 xref: RE:R-HSA-140586 xref: RE:R-HSA-140919 xref: RE:R-HSA-8870680 -is_a: FPLX:root -has_part: HGNC:FGA -has_part: HGNC:FGB -has_part: HGNC:FGG +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:3661 ! FGA +relationship: has_part HGNC:3662 ! FGB +relationship: has_part HGNC:3694 ! FGG [Term] -id: FPLX:FLOT +id: FPLX:000170 name: FLOT synonym: "flotillin" EXACT [] xref: BEL:"FLOT Family" @@ -2831,49 +2851,49 @@ xref: IP:IPR031905 xref: MEDSCAN:urn:agi-protfc:flotillin xref: XFAM:PF15975 xref: RE:R-HSA-8849894 -is_a: FPLX:root -inverse_is_a: HGNC:FLOT1 -inverse_is_a: HGNC:FLOT2 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:3757 ! FLOT1 +relationship: inverse_is_a HGNC:3758 ! FLOT2 [Term] -id: FPLX:FLRT +id: FPLX:000171 name: FLRT synonym: "FLRT family" EXACT [] synonym: "Flrt family" EXACT [] synonym: "FLRT proteins" EXACT [] xref: BEL:"FLRT Family" xref: RE:R-HSA-5656056 -is_a: FPLX:root -inverse_is_a: HGNC:FLRT1 -inverse_is_a: HGNC:FLRT2 -inverse_is_a: HGNC:FLRT3 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:3760 ! FLRT1 +relationship: inverse_is_a HGNC:3761 ! FLRT2 +relationship: inverse_is_a HGNC:3762 ! FLRT3 [Term] -id: FPLX:FNT +id: FPLX:000172 name: FNT synonym: "farnesyltransferase" EXACT [] synonym: "FTase" EXACT [] synonym: "protein farnesyltransferase" EXACT [] xref: ECCODE:2.5.1.58 xref: RE:R-HSA-2530496 -is_a: FPLX:root -has_part: HGNC:FNTA -has_part: HGNC:FNTB +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:3782 ! FNTA +relationship: has_part HGNC:3785 ! FNTB [Term] -id: FPLX:FOS_family +id: FPLX:000173 name: FOS-family synonym: "FOS" EXACT [] synonym: "Fos" EXACT [] xref: NEXTPROT-FAMILY:00408 -part_of: FPLX:AP1 -inverse_is_a: HGNC:FOS -inverse_is_a: HGNC:FOSB -inverse_is_a: HGNC:FOSL1 -inverse_is_a: HGNC:FOSL2 +relationship: part_of FPLX:000048 ! AP1 +relationship: inverse_is_a HGNC:3796 ! FOS +relationship: inverse_is_a HGNC:3797 ! FOSB +relationship: inverse_is_a HGNC:13718 ! FOSL1 +relationship: inverse_is_a HGNC:3798 ! FOSL2 [Term] -id: FPLX:FOXO +id: FPLX:000174 name: FOXO synonym: "FOXO" EXACT [] synonym: "FoxO" EXACT [] @@ -2881,49 +2901,49 @@ xref: BEL:"FOXO Family" xref: IP:IPR032067 xref: NCIT:C118892 xref: SIGNOR:SIGNOR-PF27 -is_a: FPLX:root -inverse_is_a: HGNC:FOXO1 -inverse_is_a: HGNC:FOXO3 -inverse_is_a: HGNC:FOXO4 -inverse_is_a: HGNC:FOXO6 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:3819 ! FOXO1 +relationship: inverse_is_a HGNC:3821 ! FOXO3 +relationship: inverse_is_a HGNC:7139 ! FOXO4 +relationship: inverse_is_a HGNC:24814 ! FOXO6 [Term] -id: FPLX:FSH +id: FPLX:000175 name: FSH synonym: "follicle-stimulating hormone" EXACT [] synonym: "FSH" EXACT [] xref: BEL:"Follicle Stimulating Hormone Complex" xref: GO:0016914 xref: RE:R-HSA-378947 -is_a: FPLX:root -has_part: HGNC:CGA -has_part: HGNC:FSHB +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:1885 ! CGA +relationship: has_part HGNC:3964 ! FSHB [Term] -id: FPLX:FUT +id: FPLX:000176 name: FUT synonym: "Fucosyltransferase" EXACT [] synonym: "Fucosyltransferases" EXACT [] synonym: "fucosyltransferase" EXACT [] synonym: "fucosyltransferases" EXACT [] synonym: "FUT" EXACT [] -is_a: FPLX:Glycosyltransferase -inverse_is_a: HGNC:FUT1 -inverse_is_a: HGNC:FUT2 -inverse_is_a: HGNC:FUT3 -inverse_is_a: HGNC:FUT4 -inverse_is_a: HGNC:FUT5 -inverse_is_a: HGNC:FUT6 -inverse_is_a: HGNC:FUT7 -inverse_is_a: HGNC:FUT8 -inverse_is_a: HGNC:FUT9 -inverse_is_a: HGNC:FUT10 -inverse_is_a: HGNC:FUT11 -inverse_is_a: HGNC:POFUT1 -inverse_is_a: HGNC:POFUT2 - -[Term] -id: FPLX:FZD +is_a: FPLX:000198 ! Glycosyltransferase +relationship: inverse_is_a HGNC:4012 ! FUT1 +relationship: inverse_is_a HGNC:4013 ! FUT2 +relationship: inverse_is_a HGNC:4014 ! FUT3 +relationship: inverse_is_a HGNC:4015 ! FUT4 +relationship: inverse_is_a HGNC:4016 ! FUT5 +relationship: inverse_is_a HGNC:4017 ! FUT6 +relationship: inverse_is_a HGNC:4018 ! FUT7 +relationship: inverse_is_a HGNC:4019 ! FUT8 +relationship: inverse_is_a HGNC:4020 ! FUT9 +relationship: inverse_is_a HGNC:19234 ! FUT10 +relationship: inverse_is_a HGNC:19233 ! FUT11 +relationship: inverse_is_a HGNC:14988 ! POFUT1 +relationship: inverse_is_a HGNC:14683 ! POFUT2 + +[Term] +id: FPLX:000177 name: FZD synonym: "Fz" EXACT [] synonym: "FZD" EXACT [] @@ -2933,28 +2953,28 @@ xref: MEDSCAN:urn:agi-complex:prophash-047b61fab6d7e7445346cc84dafcb267 xref: XFAM:PF01534 xref: RE:R-HSA-517388 xref: SIGNOR:SIGNOR-PF11 -is_a: FPLX:root -inverse_is_a: HGNC:FZD1 -inverse_is_a: HGNC:FZD10 -inverse_is_a: HGNC:FZD2 -inverse_is_a: HGNC:FZD3 -inverse_is_a: HGNC:FZD4 -inverse_is_a: HGNC:FZD5 -inverse_is_a: HGNC:FZD6 -inverse_is_a: HGNC:FZD7 -inverse_is_a: HGNC:FZD8 -inverse_is_a: HGNC:FZD9 - -[Term] -id: FPLX:F_actin +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:4038 ! FZD1 +relationship: inverse_is_a HGNC:4039 ! FZD10 +relationship: inverse_is_a HGNC:4040 ! FZD2 +relationship: inverse_is_a HGNC:4041 ! FZD3 +relationship: inverse_is_a HGNC:4042 ! FZD4 +relationship: inverse_is_a HGNC:4043 ! FZD5 +relationship: inverse_is_a HGNC:4044 ! FZD6 +relationship: inverse_is_a HGNC:4045 ! FZD7 +relationship: inverse_is_a HGNC:4046 ! FZD8 +relationship: inverse_is_a HGNC:4047 ! FZD9 + +[Term] +id: FPLX:000178 name: F-actin synonym: "F-actin" EXACT [] xref: GO:0031941 xref: MEDSCAN:urn:agi-protfc:F-actin-binding%20protein -is_a: FPLX:Actin +is_a: FPLX:000009 ! Actin [Term] -id: FPLX:GABR +id: FPLX:000179 name: GABR synonym: "GABA receptor" EXACT [] synonym: "GABA receptors" EXACT [] @@ -2963,55 +2983,55 @@ synonym: "gamma-aminobutyric-acid A receptor" EXACT [] synonym: "γ-aminobutyric-acid A receptor" EXACT [] xref: BEL:"GABR Family" xref: GO:0004890 -is_a: FPLX:root -inverse_is_a: HGNC:GABRA1 -inverse_is_a: HGNC:GABRA2 -inverse_is_a: HGNC:GABRA3 -inverse_is_a: HGNC:GABRA4 -inverse_is_a: HGNC:GABRA5 -inverse_is_a: HGNC:GABRA6 -inverse_is_a: HGNC:GABRB1 -inverse_is_a: HGNC:GABRB2 -inverse_is_a: HGNC:GABRB3 -inverse_is_a: HGNC:GABRD -inverse_is_a: HGNC:GABRE -inverse_is_a: HGNC:GABRG1 -inverse_is_a: HGNC:GABRG2 -inverse_is_a: HGNC:GABRG3 -inverse_is_a: HGNC:GABRP -inverse_is_a: HGNC:GABRQ -inverse_is_a: HGNC:GABRR1 -inverse_is_a: HGNC:GABRR2 -inverse_is_a: HGNC:GABRR3 - -[Term] -id: FPLX:GALNT +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:4075 ! GABRA1 +relationship: inverse_is_a HGNC:4076 ! GABRA2 +relationship: inverse_is_a HGNC:4077 ! GABRA3 +relationship: inverse_is_a HGNC:4078 ! GABRA4 +relationship: inverse_is_a HGNC:4079 ! GABRA5 +relationship: inverse_is_a HGNC:4080 ! GABRA6 +relationship: inverse_is_a HGNC:4081 ! GABRB1 +relationship: inverse_is_a HGNC:4082 ! GABRB2 +relationship: inverse_is_a HGNC:4083 ! GABRB3 +relationship: inverse_is_a HGNC:4084 ! GABRD +relationship: inverse_is_a HGNC:4085 ! GABRE +relationship: inverse_is_a HGNC:4086 ! GABRG1 +relationship: inverse_is_a HGNC:4087 ! GABRG2 +relationship: inverse_is_a HGNC:4088 ! GABRG3 +relationship: inverse_is_a HGNC:4089 ! GABRP +relationship: inverse_is_a HGNC:14454 ! GABRQ +relationship: inverse_is_a HGNC:4090 ! GABRR1 +relationship: inverse_is_a HGNC:4091 ! GABRR2 +relationship: inverse_is_a HGNC:17969 ! GABRR3 + +[Term] +id: FPLX:000180 name: GALNT synonym: "GALNT" EXACT [] -is_a: FPLX:Glycosyltransferase -inverse_is_a: HGNC:GALNTL5 -inverse_is_a: HGNC:GALNTL6 -inverse_is_a: HGNC:GALNT1 -inverse_is_a: HGNC:GALNT2 -inverse_is_a: HGNC:GALNT3 -inverse_is_a: HGNC:GALNT4 -inverse_is_a: HGNC:GALNT5 -inverse_is_a: HGNC:GALNT6 -inverse_is_a: HGNC:GALNT7 -inverse_is_a: HGNC:GALNT8 -inverse_is_a: HGNC:GALNT9 -inverse_is_a: HGNC:GALNT10 -inverse_is_a: HGNC:GALNT11 -inverse_is_a: HGNC:GALNT12 -inverse_is_a: HGNC:GALNT13 -inverse_is_a: HGNC:GALNT14 -inverse_is_a: HGNC:GALNT15 -inverse_is_a: HGNC:GALNT16 -inverse_is_a: HGNC:GALNT18 -inverse_is_a: HGNC:GALNT17 - -[Term] -id: FPLX:Gamma_secretase +is_a: FPLX:000198 ! Glycosyltransferase +relationship: inverse_is_a HGNC:21725 ! GALNTL5 +relationship: inverse_is_a HGNC:33844 ! GALNTL6 +relationship: inverse_is_a HGNC:4123 ! GALNT1 +relationship: inverse_is_a HGNC:4124 ! GALNT2 +relationship: inverse_is_a HGNC:4125 ! GALNT3 +relationship: inverse_is_a HGNC:4126 ! GALNT4 +relationship: inverse_is_a HGNC:4127 ! GALNT5 +relationship: inverse_is_a HGNC:4128 ! GALNT6 +relationship: inverse_is_a HGNC:4129 ! GALNT7 +relationship: inverse_is_a HGNC:4130 ! GALNT8 +relationship: inverse_is_a HGNC:4131 ! GALNT9 +relationship: inverse_is_a HGNC:19873 ! GALNT10 +relationship: inverse_is_a HGNC:19875 ! GALNT11 +relationship: inverse_is_a HGNC:19877 ! GALNT12 +relationship: inverse_is_a HGNC:23242 ! GALNT13 +relationship: inverse_is_a HGNC:22946 ! GALNT14 +relationship: inverse_is_a HGNC:21531 ! GALNT15 +relationship: inverse_is_a HGNC:23233 ! GALNT16 +relationship: inverse_is_a HGNC:30488 ! GALNT18 +relationship: inverse_is_a HGNC:16347 ! GALNT17 + +[Term] +id: FPLX:000181 name: Gamma-secretase synonym: "gamma secretase" EXACT [] synonym: "gamma-secretase" EXACT [] @@ -3019,32 +3039,32 @@ synonym: "γ secretase" EXACT [] xref: BEL:"gamma Secretase Complex" xref: GO:0070765 xref: NCIT:C95114 -is_a: FPLX:root -has_part: HGNC:APH1A -has_part: HGNC:PSEN1 -has_part: HGNC:PSENEN +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:29509 ! APH1A +relationship: has_part HGNC:9508 ! PSEN1 +relationship: has_part HGNC:30100 ! PSENEN [Term] -id: FPLX:GAP +id: FPLX:000182 name: GAP synonym: "GAP" EXACT [] synonym: "GTPase-activating proteins" EXACT [] xref: GO:0005096 xref: NCIT:C17298 -is_a: FPLX:root +is_a: FPLX:000000 ! famplex [Term] -id: FPLX:GAS6_receptor +id: FPLX:000183 name: GAS6-receptor synonym: "Gas6 receptors" EXACT [] xref: BEL:"GAS6 Receptor Family" -is_a: FPLX:root -inverse_is_a: HGNC:AXL -inverse_is_a: HGNC:MERTK -inverse_is_a: HGNC:TYRO3 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:905 ! AXL +relationship: inverse_is_a HGNC:7027 ! MERTK +relationship: inverse_is_a HGNC:12446 ! TYRO3 [Term] -id: FPLX:GATA +id: FPLX:000184 name: GATA synonym: "GATA family" EXACT [] synonym: "GATA" EXACT [] @@ -3052,16 +3072,16 @@ xref: BEL:"GATA Family" xref: MEDSCAN:urn:agi-aopfc:0000105 xref: XFAM:PF00320 xref: RE:R-HSA-996770 -is_a: FPLX:root -inverse_is_a: HGNC:GATA1 -inverse_is_a: HGNC:GATA2 -inverse_is_a: HGNC:GATA3 -inverse_is_a: HGNC:GATA4 -inverse_is_a: HGNC:GATA5 -inverse_is_a: HGNC:GATA6 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:4170 ! GATA1 +relationship: inverse_is_a HGNC:4171 ! GATA2 +relationship: inverse_is_a HGNC:4172 ! GATA3 +relationship: inverse_is_a HGNC:4173 ! GATA4 +relationship: inverse_is_a HGNC:15802 ! GATA5 +relationship: inverse_is_a HGNC:4174 ! GATA6 [Term] -id: FPLX:GCNT +id: FPLX:000185 name: GCNT synonym: "GCNT" EXACT [] synonym: "XYLT" EXACT [] @@ -3069,26 +3089,26 @@ synonym: "Xylosyltransferase" EXACT [] synonym: "Xylosyltransferases" EXACT [] synonym: "xylosyltransferase" EXACT [] synonym: "xylosyltransferases" EXACT [] -is_a: FPLX:Glycosyltransferase -inverse_is_a: HGNC:GCNT1 -inverse_is_a: HGNC:GCNT2 -inverse_is_a: HGNC:GCNT3 -inverse_is_a: HGNC:GCNT4 -inverse_is_a: HGNC:GCNT7 -inverse_is_a: HGNC:XYLT1 -inverse_is_a: HGNC:XYLT2 +is_a: FPLX:000198 ! Glycosyltransferase +relationship: inverse_is_a HGNC:4203 ! GCNT1 +relationship: inverse_is_a HGNC:4204 ! GCNT2 +relationship: inverse_is_a HGNC:4205 ! GCNT3 +relationship: inverse_is_a HGNC:17973 ! GCNT4 +relationship: inverse_is_a HGNC:16099 ! GCNT7 +relationship: inverse_is_a HGNC:15516 ! XYLT1 +relationship: inverse_is_a HGNC:15517 ! XYLT2 [Term] -id: FPLX:GEF +id: FPLX:000186 name: GEF synonym: "GEF" EXACT [] synonym: "GEFs" EXACT [] xref: GO:0008433 xref: NCIT:C17494 -is_a: FPLX:root +is_a: FPLX:000000 ! famplex [Term] -id: FPLX:GPCR +id: FPLX:000187 name: GPCR synonym: "Class C GPCR" EXACT [] synonym: "GPCR" EXACT [] @@ -3098,10 +3118,10 @@ xref: MEDSCAN:urn:agi-complex:prophash-763d31b31e177311583df0ac1ea015da xref: MEDSCAN:urn:agi-protfc:class%20c%20orphan%20receptor xref: NCIT:C18239 xref: SIGNOR:SIGNOR-PF33 -is_a: FPLX:root +is_a: FPLX:000000 ! famplex [Term] -id: FPLX:GPIb_IX_V +id: FPLX:000188 name: GPIb-IX-V synonym: "glycoprotein Ib-V-IX complex" EXACT [] synonym: "Glycoprotein Ib-V-IX" EXACT [] @@ -3113,14 +3133,14 @@ xref: BEL:"Ib-V-IX Complex" xref: GO:1990779 xref: NCIT:C126122 xref: RE:R-HSA-114668 -is_a: FPLX:root -has_part: HGNC:GP1BA -has_part: HGNC:GP1BB -has_part: HGNC:GP5 -has_part: HGNC:GP9 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:4439 ! GP1BA +relationship: has_part HGNC:4440 ! GP1BB +relationship: has_part HGNC:4443 ! GP5 +relationship: has_part HGNC:4444 ! GP9 [Term] -id: FPLX:GPIT +id: FPLX:000189 name: GPIT synonym: "glycosylphosphatidylinositol transamidase complex" EXACT [] synonym: "GPI transamidase complex" EXACT [] @@ -3128,15 +3148,15 @@ synonym: "GPIT complex" EXACT [] synonym: "GPIT" EXACT [] xref: BEL:"GPIT Complex" xref: RE:R-HSA-162690 -is_a: FPLX:root -has_part: HGNC:GPAA1 -has_part: HGNC:PIGK -has_part: HGNC:PIGS -has_part: HGNC:PIGT -has_part: HGNC:PIGU +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:4446 ! GPAA1 +relationship: has_part HGNC:8965 ! PIGK +relationship: has_part HGNC:14937 ! PIGS +relationship: has_part HGNC:14938 ! PIGT +relationship: has_part HGNC:15791 ! PIGU [Term] -id: FPLX:GPX +id: FPLX:000190 name: GPX synonym: "glutathione peroxidase" EXACT [] xref: BEL:"GPX Family" @@ -3145,18 +3165,18 @@ xref: IP:IPR000889 xref: IP:IPR029760 xref: NEXTPROT-FAMILY:01553 xref: XFAM:PF00255 -is_a: FPLX:root -inverse_is_a: HGNC:GPX1 -inverse_is_a: HGNC:GPX2 -inverse_is_a: HGNC:GPX3 -inverse_is_a: HGNC:GPX4 -inverse_is_a: HGNC:GPX5 -inverse_is_a: HGNC:GPX6 -inverse_is_a: HGNC:GPX7 -inverse_is_a: HGNC:GPX8 - -[Term] -id: FPLX:GRIA +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:4553 ! GPX1 +relationship: inverse_is_a HGNC:4554 ! GPX2 +relationship: inverse_is_a HGNC:4555 ! GPX3 +relationship: inverse_is_a HGNC:4556 ! GPX4 +relationship: inverse_is_a HGNC:4557 ! GPX5 +relationship: inverse_is_a HGNC:4558 ! GPX6 +relationship: inverse_is_a HGNC:4559 ! GPX7 +relationship: inverse_is_a HGNC:33100 ! GPX8 + +[Term] +id: FPLX:000191 name: GRIA synonym: "AMPA glutamate receptor" EXACT [] synonym: "AMPA receptor" EXACT [] @@ -3170,14 +3190,14 @@ xref: RE:R-HSA-399713 xref: RE:R-HSA-416323 xref: RE:R-HSA-420974 xref: RE:R-HSA-421001 -is_a: FPLX:root -inverse_is_a: HGNC:GRIA1 -inverse_is_a: HGNC:GRIA2 -inverse_is_a: HGNC:GRIA3 -inverse_is_a: HGNC:GRIA4 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:4571 ! GRIA1 +relationship: inverse_is_a HGNC:4572 ! GRIA2 +relationship: inverse_is_a HGNC:4573 ! GRIA3 +relationship: inverse_is_a HGNC:4574 ! GRIA4 [Term] -id: FPLX:GRK +id: FPLX:000192 name: GRK synonym: "G protein-coupled receptor kinases" EXACT [] synonym: "GPCR kinases" EXACT [] @@ -3187,16 +3207,16 @@ xref: BEL:"GRK Family" xref: ECCODE:2.7.11.16 xref: IP:IPR000239 xref: NCIT:C26233 -is_a: FPLX:root -inverse_is_a: FPLX:ADRBK -inverse_is_a: HGNC:GRK1 -inverse_is_a: HGNC:GRK4 -inverse_is_a: HGNC:GRK5 -inverse_is_a: HGNC:GRK6 -inverse_is_a: HGNC:GRK7 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a FPLX:000022 ! ADRBK +relationship: inverse_is_a HGNC:10013 ! GRK1 +relationship: inverse_is_a HGNC:4543 ! GRK4 +relationship: inverse_is_a HGNC:4544 ! GRK5 +relationship: inverse_is_a HGNC:4545 ! GRK6 +relationship: inverse_is_a HGNC:17031 ! GRK7 [Term] -id: FPLX:GRM +id: FPLX:000193 name: GRM synonym: "glutamate metabotropic receptors" EXACT [] synonym: "metabotrophic glutamate receptor" EXACT [] @@ -3207,18 +3227,18 @@ xref: IP:IPR000162 xref: MEDSCAN:urn:agi-protfc:mglur xref: RE:R-HSA-420516 xref: RE:R-HSA-420519 -is_a: FPLX:root -inverse_is_a: HGNC:GRM1 -inverse_is_a: HGNC:GRM2 -inverse_is_a: HGNC:GRM3 -inverse_is_a: HGNC:GRM4 -inverse_is_a: HGNC:GRM5 -inverse_is_a: HGNC:GRM6 -inverse_is_a: HGNC:GRM7 -inverse_is_a: HGNC:GRM8 - -[Term] -id: FPLX:GSK3 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:4593 ! GRM1 +relationship: inverse_is_a HGNC:4594 ! GRM2 +relationship: inverse_is_a HGNC:4595 ! GRM3 +relationship: inverse_is_a HGNC:4596 ! GRM4 +relationship: inverse_is_a HGNC:4597 ! GRM5 +relationship: inverse_is_a HGNC:4598 ! GRM6 +relationship: inverse_is_a HGNC:4599 ! GRM7 +relationship: inverse_is_a HGNC:4600 ! GRM8 + +[Term] +id: FPLX:000194 name: GSK3 synonym: "GSK-3" EXACT [] synonym: "GSK3" EXACT [] @@ -3227,12 +3247,12 @@ xref: MEDSCAN:urn:agi-aopfc:0000434 xref: NEXTPROT-FAMILY:03087 xref: RE:R-HSA-198358 xref: RE:R-HSA-198373 -is_a: FPLX:root -inverse_is_a: HGNC:GSK3A -inverse_is_a: HGNC:GSK3B +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:4616 ! GSK3A +relationship: inverse_is_a HGNC:4617 ! GSK3B [Term] -id: FPLX:GST +id: FPLX:000195 name: GST synonym: "glutathione S-transferase" EXACT [] synonym: "GST" EXACT [] @@ -3240,28 +3260,28 @@ synonym: "GSTs" EXACT [] xref: BEL:"GST Family" xref: NCIT:C16641 xref: NEXTPROT-FAMILY:01669 -is_a: FPLX:root -inverse_is_a: HGNC:GSTA1 -inverse_is_a: HGNC:GSTA2 -inverse_is_a: HGNC:GSTA3 -inverse_is_a: HGNC:GSTA4 -inverse_is_a: HGNC:GSTA5 -inverse_is_a: HGNC:GSTK1 -inverse_is_a: HGNC:GSTM1 -inverse_is_a: HGNC:GSTM2 -inverse_is_a: HGNC:GSTM3 -inverse_is_a: HGNC:GSTM4 -inverse_is_a: HGNC:GSTM5 -inverse_is_a: HGNC:GSTO1 -inverse_is_a: HGNC:GSTO2 -inverse_is_a: HGNC:GSTP1 -inverse_is_a: HGNC:GSTT1 -inverse_is_a: HGNC:GSTT2 -inverse_is_a: HGNC:GSTZ1 -inverse_is_a: HGNC:GSTT2B - -[Term] -id: FPLX:GTF2E +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:4626 ! GSTA1 +relationship: inverse_is_a HGNC:4627 ! GSTA2 +relationship: inverse_is_a HGNC:4628 ! GSTA3 +relationship: inverse_is_a HGNC:4629 ! GSTA4 +relationship: inverse_is_a HGNC:19662 ! GSTA5 +relationship: inverse_is_a HGNC:16906 ! GSTK1 +relationship: inverse_is_a HGNC:4632 ! GSTM1 +relationship: inverse_is_a HGNC:4634 ! GSTM2 +relationship: inverse_is_a HGNC:4635 ! GSTM3 +relationship: inverse_is_a HGNC:4636 ! GSTM4 +relationship: inverse_is_a HGNC:4637 ! GSTM5 +relationship: inverse_is_a HGNC:13312 ! GSTO1 +relationship: inverse_is_a HGNC:23064 ! GSTO2 +relationship: inverse_is_a HGNC:4638 ! GSTP1 +relationship: inverse_is_a HGNC:4641 ! GSTT1 +relationship: inverse_is_a HGNC:4642 ! GSTT2 +relationship: inverse_is_a HGNC:4643 ! GSTZ1 +relationship: inverse_is_a HGNC:33437 ! GSTT2B + +[Term] +id: FPLX:000196 name: GTF2E synonym: "general transcription factor II E" EXACT [] synonym: "TFIIE" EXACT [] @@ -3270,12 +3290,12 @@ synonym: "transcription factor IIE" EXACT [] xref: BEL:"GTF2E Complex" xref: GO:0005673 xref: RE:R-HSA-109633 -is_a: FPLX:root -has_part: HGNC:GTF2E1 -has_part: HGNC:GTF2E2 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:4650 ! GTF2E1 +relationship: has_part HGNC:4651 ! GTF2E2 [Term] -id: FPLX:GTF2F +id: FPLX:000197 name: GTF2F synonym: "general transcription factor II F" EXACT [] synonym: "TFIIF" EXACT [] @@ -3285,84 +3305,84 @@ xref: BEL:"GTF2F Complex" xref: GO:0005674 xref: IP:IPR011039 xref: RE:R-HSA-109631 -is_a: FPLX:root -has_part: HGNC:GTF2F1 -has_part: HGNC:GTF2F2 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:4652 ! GTF2F1 +relationship: has_part HGNC:4653 ! GTF2F2 [Term] -id: FPLX:Glycosyltransferase +id: FPLX:000198 name: Glycosyltransferase xref: MESH:D016695 -is_a: FPLX:root -inverse_is_a: FPLX:A4GALT_family -inverse_is_a: FPLX:ALG10 -inverse_is_a: FPLX:ALG1_family -inverse_is_a: FPLX:ALG3_family -inverse_is_a: FPLX:ALG6_family -inverse_is_a: FPLX:ALG13_family -inverse_is_a: FPLX:B3GAT -inverse_is_a: FPLX:Beta_3_4_GTF -inverse_is_a: FPLX:COLGALT -inverse_is_a: FPLX:EXT -inverse_is_a: FPLX:FUT -inverse_is_a: FPLX:GALNT -inverse_is_a: FPLX:GCNT -inverse_is_a: FPLX:GTF_family_2 -inverse_is_a: FPLX:GTF_family_6 -inverse_is_a: FPLX:GTF_family_8 -inverse_is_a: FPLX:GTF_family_29 -inverse_is_a: FPLX:GTF_family_90 -inverse_is_a: FPLX:MGAT -inverse_is_a: FPLX:OGT_family -inverse_is_a: FPLX:PYG -inverse_is_a: FPLX:STT3 -inverse_is_a: FPLX:UGCG -inverse_is_a: FPLX:UGT -inverse_is_a: FPLX:UGGT - -[Term] -id: FPLX:GTF_family_2 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a FPLX:000002 ! A4GALT_family +relationship: inverse_is_a FPLX:000026 ! ALG10 +relationship: inverse_is_a FPLX:000027 ! ALG1_family +relationship: inverse_is_a FPLX:000028 ! ALG3_family +relationship: inverse_is_a FPLX:000029 ! ALG6_family +relationship: inverse_is_a FPLX:000030 ! ALG13_family +relationship: inverse_is_a FPLX:000063 ! B3GAT +relationship: inverse_is_a FPLX:000065 ! Beta_3_4_GTF +relationship: inverse_is_a FPLX:000112 ! COLGALT +relationship: inverse_is_a FPLX:000165 ! EXT +relationship: inverse_is_a FPLX:000176 ! FUT +relationship: inverse_is_a FPLX:000180 ! GALNT +relationship: inverse_is_a FPLX:000185 ! GCNT +relationship: inverse_is_a FPLX:000199 ! GTF_family_2 +relationship: inverse_is_a FPLX:000200 ! GTF_family_6 +relationship: inverse_is_a FPLX:000201 ! GTF_family_8 +relationship: inverse_is_a FPLX:000202 ! GTF_family_29 +relationship: inverse_is_a FPLX:000203 ! GTF_family_90 +relationship: inverse_is_a FPLX:000287 ! MGAT +relationship: inverse_is_a FPLX:000322 ! OGT_family +relationship: inverse_is_a FPLX:000396 ! PYG +relationship: inverse_is_a FPLX:000455 ! STT3 +relationship: inverse_is_a FPLX:000491 ! UGCG +relationship: inverse_is_a FPLX:000492 ! UGT +relationship: inverse_is_a FPLX:000493 ! UGGT + +[Term] +id: FPLX:000199 name: GTF-family-2 synonym: "Glycosyltransferase family 2" EXACT [] synonym: "glycosyltransferase family 2" EXACT [] -is_a: FPLX:Glycosyltransferase -inverse_is_a: HGNC:ALG5 -inverse_is_a: HGNC:B3GNTL1 -inverse_is_a: HGNC:DPM1 -inverse_is_a: HGNC:HAS1 -inverse_is_a: HGNC:HAS2 -inverse_is_a: HGNC:HAS3 +is_a: FPLX:000198 ! Glycosyltransferase +relationship: inverse_is_a HGNC:20266 ! ALG5 +relationship: inverse_is_a HGNC:21727 ! B3GNTL1 +relationship: inverse_is_a HGNC:3005 ! DPM1 +relationship: inverse_is_a HGNC:4818 ! HAS1 +relationship: inverse_is_a HGNC:4819 ! HAS2 +relationship: inverse_is_a HGNC:4820 ! HAS3 [Term] -id: FPLX:GTF_family_6 +id: FPLX:000200 name: GTF-family-6 synonym: "Glycosyltransferase family 6" EXACT [] synonym: "glycosyltransferase family 6" EXACT [] -is_a: FPLX:Glycosyltransferase -inverse_is_a: HGNC:ABO -inverse_is_a: HGNC:A3GALT2 -inverse_is_a: HGNC:GBGT1 -inverse_is_a: HGNC:GLT6D1 +is_a: FPLX:000198 ! Glycosyltransferase +relationship: inverse_is_a HGNC:79 ! ABO +relationship: inverse_is_a HGNC:30005 ! A3GALT2 +relationship: inverse_is_a HGNC:20460 ! GBGT1 +relationship: inverse_is_a HGNC:23671 ! GLT6D1 [Term] -id: FPLX:GTF_family_8 +id: FPLX:000201 name: GTF-family-8 synonym: "Glycosyltransferase family 8" EXACT [] synonym: "glycosyltransferase family 8" EXACT [] -is_a: FPLX:Glycosyltransferase -inverse_is_a: HGNC:GLT8D1 -inverse_is_a: HGNC:GLT8D2 -inverse_is_a: HGNC:GXYLT1 -inverse_is_a: HGNC:GXYLT2 -inverse_is_a: HGNC:GYG1 -inverse_is_a: HGNC:GYG2 -inverse_is_a: HGNC:LARGE1 -inverse_is_a: HGNC:LARGE2 -inverse_is_a: HGNC:RXYLT1 -inverse_is_a: HGNC:XXYLT1 - -[Term] -id: FPLX:GTF_family_29 +is_a: FPLX:000198 ! Glycosyltransferase +relationship: inverse_is_a HGNC:24870 ! GLT8D1 +relationship: inverse_is_a HGNC:24890 ! GLT8D2 +relationship: inverse_is_a HGNC:27482 ! GXYLT1 +relationship: inverse_is_a HGNC:33383 ! GXYLT2 +relationship: inverse_is_a HGNC:4699 ! GYG1 +relationship: inverse_is_a HGNC:4700 ! GYG2 +relationship: inverse_is_a HGNC:6511 ! LARGE1 +relationship: inverse_is_a HGNC:16522 ! LARGE2 +relationship: inverse_is_a HGNC:13530 ! RXYLT1 +relationship: inverse_is_a HGNC:26639 ! XXYLT1 + +[Term] +id: FPLX:000202 name: GTF-family-29 synonym: "Glycosyltransferase family 29" EXACT [] synonym: "glycosyltransferase family 29" EXACT [] @@ -3370,74 +3390,74 @@ synonym: "Sialytransferase" EXACT [] synonym: "Sialytransferases" EXACT [] synonym: "sialytransferase" EXACT [] synonym: "sialytransferases" EXACT [] -is_a: FPLX:Glycosyltransferase -inverse_is_a: HGNC:ST3GAL1 -inverse_is_a: HGNC:ST3GAL2 -inverse_is_a: HGNC:ST3GAL3 -inverse_is_a: HGNC:ST3GAL4 -inverse_is_a: HGNC:ST3GAL5 -inverse_is_a: HGNC:ST3GAL6 -inverse_is_a: HGNC:ST6GALNAC1 -inverse_is_a: HGNC:ST6GALNAC2 -inverse_is_a: HGNC:ST6GALNAC3 -inverse_is_a: HGNC:ST6GALNAC4 -inverse_is_a: HGNC:ST6GALNAC5 -inverse_is_a: HGNC:ST6GALNAC6 -inverse_is_a: HGNC:ST6GAL1 -inverse_is_a: HGNC:ST6GAL2 -inverse_is_a: HGNC:ST8SIA1 -inverse_is_a: HGNC:ST8SIA2 -inverse_is_a: HGNC:ST8SIA3 -inverse_is_a: HGNC:ST8SIA4 -inverse_is_a: HGNC:ST8SIA5 -inverse_is_a: HGNC:ST8SIA6 - -[Term] -id: FPLX:GTF_family_90 +is_a: FPLX:000198 ! Glycosyltransferase +relationship: inverse_is_a HGNC:10862 ! ST3GAL1 +relationship: inverse_is_a HGNC:10863 ! ST3GAL2 +relationship: inverse_is_a HGNC:10866 ! ST3GAL3 +relationship: inverse_is_a HGNC:10864 ! ST3GAL4 +relationship: inverse_is_a HGNC:10872 ! ST3GAL5 +relationship: inverse_is_a HGNC:18080 ! ST3GAL6 +relationship: inverse_is_a HGNC:23614 ! ST6GALNAC1 +relationship: inverse_is_a HGNC:10867 ! ST6GALNAC2 +relationship: inverse_is_a HGNC:19343 ! ST6GALNAC3 +relationship: inverse_is_a HGNC:17846 ! ST6GALNAC4 +relationship: inverse_is_a HGNC:19342 ! ST6GALNAC5 +relationship: inverse_is_a HGNC:23364 ! ST6GALNAC6 +relationship: inverse_is_a HGNC:10860 ! ST6GAL1 +relationship: inverse_is_a HGNC:10861 ! ST6GAL2 +relationship: inverse_is_a HGNC:10869 ! ST8SIA1 +relationship: inverse_is_a HGNC:10870 ! ST8SIA2 +relationship: inverse_is_a HGNC:14269 ! ST8SIA3 +relationship: inverse_is_a HGNC:10871 ! ST8SIA4 +relationship: inverse_is_a HGNC:17827 ! ST8SIA5 +relationship: inverse_is_a HGNC:23317 ! ST8SIA6 + +[Term] +id: FPLX:000203 name: GTF-family-90 synonym: "Glycosyltransferase family 90" EXACT [] synonym: "glycosyltransferase family 90" EXACT [] -is_a: FPLX:Glycosyltransferase -inverse_is_a: HGNC:POGLUT2 -inverse_is_a: HGNC:POGLUT3 -inverse_is_a: HGNC:POGLUT1 +is_a: FPLX:000198 ! Glycosyltransferase +relationship: inverse_is_a HGNC:19350 ! POGLUT2 +relationship: inverse_is_a HGNC:28496 ! POGLUT3 +relationship: inverse_is_a HGNC:22954 ! POGLUT1 [Term] -id: FPLX:GTPase +id: FPLX:000204 name: GTPase synonym: "GTPase" EXACT [] xref: ECCODE:3.6.5.- xref: MEDSCAN:urn:agi-complex:prophash-e9fbfd73e486bda4d99b348f72bb4196 xref: NCIT:C16650 -is_a: FPLX:root +is_a: FPLX:000000 ! famplex [Term] -id: FPLX:GUCY +id: FPLX:000205 name: GUCY synonym: "guanylate cyclase" EXACT [] synonym: "guanylyl cyclase" EXACT [] xref: BEL:"GUCY Family" xref: ECCODE:4.6.1.2 xref: NCIT:C16653 -is_a: FPLX:root -inverse_is_a: HGNC:GUCY2C -inverse_is_a: HGNC:GUCY2D -inverse_is_a: HGNC:GUCY2F -inverse_is_a: HGNC:NPR1 -inverse_is_a: HGNC:NPR2 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:4688 ! GUCY2C +relationship: inverse_is_a HGNC:4689 ! GUCY2D +relationship: inverse_is_a HGNC:4691 ! GUCY2F +relationship: inverse_is_a HGNC:7943 ! NPR1 +relationship: inverse_is_a HGNC:7944 ! NPR2 [Term] -id: FPLX:GYS +id: FPLX:000206 name: GYS synonym: "glycogen synthase" EXACT [] xref: BEL:"GYS Family" xref: IP:IPR008631 -is_a: FPLX:root -inverse_is_a: HGNC:GYS1 -inverse_is_a: HGNC:GYS2 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:4706 ! GYS1 +relationship: inverse_is_a HGNC:4707 ! GYS2 [Term] -id: FPLX:G_12 +id: FPLX:000207 name: G-12 synonym: "G(12)" EXACT [] synonym: "G12 family" EXACT [] @@ -3447,11 +3467,11 @@ xref: IP:IPR000469 xref: RE:R-HSA-114547 xref: RE:R-HSA-418570 xref: RE:R-HSA-418572 -is_a: FPLX:G_protein -has_part: FPLX:G_12_alpha +is_a: FPLX:000214 ! G_protein +relationship: has_part FPLX:000208 ! G_12_alpha [Term] -id: FPLX:G_12_alpha +id: FPLX:000208 name: G-12-alpha synonym: "G-protein alpha-12" EXACT [] synonym: "G-protein α-12" EXACT [] @@ -3462,25 +3482,25 @@ xref: IP:IPR000469 xref: RE:R-HSA-114525 xref: RE:R-HSA-418570 xref: RE:R-HSA-418572 -is_a: FPLX:G_alpha -part_of: FPLX:G_12 -inverse_is_a: HGNC:GNA12 -inverse_is_a: HGNC:GNA13 +is_a: FPLX:000209 ! G_alpha +relationship: part_of FPLX:000207 ! G_12 +relationship: inverse_is_a HGNC:4380 ! GNA12 +relationship: inverse_is_a HGNC:4381 ! GNA13 [Term] -id: FPLX:G_alpha +id: FPLX:000209 name: G-alpha synonym: "G_alpha" EXACT [] synonym: "G_α" EXACT [] xref: XFAM:PF00503 -is_a: FPLX:root -inverse_is_a: FPLX:G_i_alpha -inverse_is_a: FPLX:G_s_alpha -inverse_is_a: FPLX:G_q_alpha -inverse_is_a: FPLX:G_12_alpha +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a FPLX:000213 ! G_i_alpha +relationship: inverse_is_a FPLX:000218 ! G_s_alpha +relationship: inverse_is_a FPLX:000216 ! G_q_alpha +relationship: inverse_is_a FPLX:000208 ! G_12_alpha [Term] -id: FPLX:G_beta +id: FPLX:000210 name: G-beta synonym: "G protein beta" EXACT [] synonym: "G protein β" EXACT [] @@ -3496,15 +3516,15 @@ xref: RE:R-HSA-6814207 xref: RE:R-HSA-6814413 xref: RE:R-HSA-8850524 xref: SIGNOR:SIGNOR-PF4 -is_a: FPLX:root -inverse_is_a: HGNC:GNB1 -inverse_is_a: HGNC:GNB2 -inverse_is_a: HGNC:GNB3 -inverse_is_a: HGNC:GNB4 -inverse_is_a: HGNC:GNB5 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:4396 ! GNB1 +relationship: inverse_is_a HGNC:4398 ! GNB2 +relationship: inverse_is_a HGNC:4400 ! GNB3 +relationship: inverse_is_a HGNC:20731 ! GNB4 +relationship: inverse_is_a HGNC:4401 ! GNB5 [Term] -id: FPLX:G_gamma +id: FPLX:000211 name: G-gamma synonym: "G protein gamma subunit" EXACT [] synonym: "G protein gamma" EXACT [] @@ -3516,22 +3536,22 @@ xref: NEXTPROT-FAMILY:01400 xref: RE:R-HSA-167442 xref: RE:R-HSA-400062 xref: SIGNOR:SIGNOR-PF3 -is_a: FPLX:root -inverse_is_a: HGNC:GNG10 -inverse_is_a: HGNC:GNG11 -inverse_is_a: HGNC:GNG12 -inverse_is_a: HGNC:GNG13 -inverse_is_a: HGNC:GNG2 -inverse_is_a: HGNC:GNG3 -inverse_is_a: HGNC:GNG4 -inverse_is_a: HGNC:GNG5 -inverse_is_a: HGNC:GNG7 -inverse_is_a: HGNC:GNG8 -inverse_is_a: HGNC:GNGT1 -inverse_is_a: HGNC:GNGT2 - -[Term] -id: FPLX:G_i +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:4402 ! GNG10 +relationship: inverse_is_a HGNC:4403 ! GNG11 +relationship: inverse_is_a HGNC:19663 ! GNG12 +relationship: inverse_is_a HGNC:14131 ! GNG13 +relationship: inverse_is_a HGNC:4404 ! GNG2 +relationship: inverse_is_a HGNC:4405 ! GNG3 +relationship: inverse_is_a HGNC:4407 ! GNG4 +relationship: inverse_is_a HGNC:4408 ! GNG5 +relationship: inverse_is_a HGNC:4410 ! GNG7 +relationship: inverse_is_a HGNC:19664 ! GNG8 +relationship: inverse_is_a HGNC:4411 ! GNGT1 +relationship: inverse_is_a HGNC:4412 ! GNGT2 + +[Term] +id: FPLX:000212 name: G-i synonym: "Gi protein" EXACT [] synonym: "Gi" EXACT [] @@ -3541,11 +3561,11 @@ xref: RE:R-HSA-111864 xref: RE:R-HSA-167410 xref: RE:R-HSA-167413 xref: RE:R-HSA-167438 -is_a: FPLX:G_protein -has_part: FPLX:G_i_alpha +is_a: FPLX:000214 ! G_protein +relationship: has_part FPLX:000213 ! G_i_alpha [Term] -id: FPLX:G_i_alpha +id: FPLX:000213 name: G-i-alpha synonym: "G alphai" EXACT [] synonym: "G αi" EXACT [] @@ -3563,31 +3583,31 @@ xref: RE:R-HSA-111864 xref: RE:R-HSA-167410 xref: RE:R-HSA-167413 xref: RE:R-HSA-167438 -is_a: FPLX:G_alpha -part_of: FPLX:G_i -inverse_is_a: HGNC:GNAO1 -inverse_is_a: HGNC:GNAI1 -inverse_is_a: HGNC:GNAI2 -inverse_is_a: HGNC:GNAI3 -inverse_is_a: HGNC:GNAT1 -inverse_is_a: HGNC:GNAT2 -inverse_is_a: HGNC:GNAT3 -inverse_is_a: HGNC:GNAZ - -[Term] -id: FPLX:G_protein +is_a: FPLX:000209 ! G_alpha +relationship: part_of FPLX:000212 ! G_i +relationship: inverse_is_a HGNC:4389 ! GNAO1 +relationship: inverse_is_a HGNC:4384 ! GNAI1 +relationship: inverse_is_a HGNC:4385 ! GNAI2 +relationship: inverse_is_a HGNC:4387 ! GNAI3 +relationship: inverse_is_a HGNC:4393 ! GNAT1 +relationship: inverse_is_a HGNC:4394 ! GNAT2 +relationship: inverse_is_a HGNC:22800 ! GNAT3 +relationship: inverse_is_a HGNC:4395 ! GNAZ + +[Term] +id: FPLX:000214 name: G-protein synonym: "G protein" EXACT [] synonym: "G proteins" EXACT [] xref: NCIT:C17458 -is_a: FPLX:root -inverse_is_a: FPLX:G_i -inverse_is_a: FPLX:G_s -inverse_is_a: FPLX:G_q -inverse_is_a: FPLX:G_12 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a FPLX:000212 ! G_i +relationship: inverse_is_a FPLX:000217 ! G_s +relationship: inverse_is_a FPLX:000215 ! G_q +relationship: inverse_is_a FPLX:000207 ! G_12 [Term] -id: FPLX:G_q +id: FPLX:000215 name: G-q synonym: "G(q/11)" EXACT [] synonym: "Gq/11" EXACT [] @@ -3601,11 +3621,11 @@ xref: RE:R-HSA-399992 xref: RE:R-HSA-400000 xref: RE:R-HSA-400008 xref: RE:R-HSA-749499 -is_a: FPLX:G_protein -has_part: FPLX:G_q_alpha +is_a: FPLX:000214 ! G_protein +relationship: has_part FPLX:000216 ! G_q_alpha [Term] -id: FPLX:G_q_alpha +id: FPLX:000216 name: G-q-alpha synonym: "G alphaq" EXACT [] synonym: "G αq" EXACT [] @@ -3626,15 +3646,15 @@ xref: RE:R-HSA-399992 xref: RE:R-HSA-400000 xref: RE:R-HSA-400008 xref: RE:R-HSA-749499 -is_a: FPLX:G_alpha -part_of: FPLX:G_q -inverse_is_a: HGNC:GNAQ -inverse_is_a: HGNC:GNA11 -inverse_is_a: HGNC:GNA14 -inverse_is_a: HGNC:GNA15 +is_a: FPLX:000209 ! G_alpha +relationship: part_of FPLX:000215 ! G_q +relationship: inverse_is_a HGNC:4390 ! GNAQ +relationship: inverse_is_a HGNC:4379 ! GNA11 +relationship: inverse_is_a HGNC:4382 ! GNA14 +relationship: inverse_is_a HGNC:4383 ! GNA15 [Term] -id: FPLX:G_s +id: FPLX:000217 name: G-s synonym: "G protein Gs" EXACT [] synonym: "G protein(s)" EXACT [] @@ -3642,11 +3662,11 @@ synonym: "G S protein" EXACT [] synonym: "Gs family" EXACT [] synonym: "Gs protein" EXACT [] xref: BEL:"GNA Gs Family" -is_a: FPLX:G_protein -has_part: FPLX:G_s_alpha +is_a: FPLX:000214 ! G_protein +relationship: has_part FPLX:000218 ! G_s_alpha [Term] -id: FPLX:G_s_alpha +id: FPLX:000218 name: G-s-alpha synonym: "G alphaS" EXACT [] synonym: "G αS" EXACT [] @@ -3662,23 +3682,23 @@ synonym: "Gs alpha" EXACT [] synonym: "Gs α subunit" EXACT [] synonym: "Gs α" EXACT [] synonym: "GαS" EXACT [] -is_a: FPLX:G_alpha -part_of: FPLX:G_s -inverse_is_a: HGNC:GNAS -inverse_is_a: HGNC:GNAL +is_a: FPLX:000209 ! G_alpha +relationship: part_of FPLX:000217 ! G_s +relationship: inverse_is_a HGNC:4392 ! GNAS +relationship: inverse_is_a HGNC:4388 ! GNAL [Term] -id: FPLX:hCG +id: FPLX:000219 name: hCG synonym: "hCG" EXACT [] xref: NCIT:C2275 xref: RE:R-HSA-378941 -is_a: FPLX:root -has_part: HGNC:CGA -has_part: HGNC:CGB3 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:1885 ! CGA +relationship: has_part HGNC:1886 ! CGB3 [Term] -id: FPLX:HDAC +id: FPLX:000220 name: HDAC synonym: "HDAC" EXACT [] synonym: "histone deacetylase" EXACT [] @@ -3688,83 +3708,83 @@ xref: ECCODE:3.5.1.98 xref: IP:IPR003084 xref: MEDSCAN:urn:agi-complex:prophash-7e8823afb9ca7870b95633dcb782500b xref: NCIT:C16682 -is_a: FPLX:root -inverse_is_a: FPLX:HDAC_I -inverse_is_a: FPLX:HDAC_II -inverse_is_a: FPLX:HDAC_III -inverse_is_a: FPLX:HDAC_IV +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a FPLX:000221 ! HDAC_I +relationship: inverse_is_a FPLX:000222 ! HDAC_II +relationship: inverse_is_a FPLX:000223 ! HDAC_III +relationship: inverse_is_a FPLX:000224 ! HDAC_IV [Term] -id: FPLX:HDAC_I +id: FPLX:000221 name: HDAC-I synonym: "Class I HDACs" EXACT [] synonym: "class I HDACs" EXACT [] synonym: "class I histone deacetylases" EXACT [] xref: BEL:"HDAC Class I Family" xref: IP:IPR003084 -is_a: FPLX:HDAC -inverse_is_a: HGNC:HDAC1 -inverse_is_a: HGNC:HDAC2 -inverse_is_a: HGNC:HDAC3 -inverse_is_a: HGNC:HDAC8 +is_a: FPLX:000220 ! HDAC +relationship: inverse_is_a HGNC:4852 ! HDAC1 +relationship: inverse_is_a HGNC:4853 ! HDAC2 +relationship: inverse_is_a HGNC:4854 ! HDAC3 +relationship: inverse_is_a HGNC:13315 ! HDAC8 [Term] -id: FPLX:HDAC_II +id: FPLX:000222 name: HDAC-II synonym: "class II HDACs" EXACT [] synonym: "class II histone deacetylases" EXACT [] xref: BEL:"HDAC Class II Family" -is_a: FPLX:HDAC -inverse_is_a: HGNC:HDAC4 -inverse_is_a: HGNC:HDAC5 -inverse_is_a: HGNC:HDAC7 -inverse_is_a: HGNC:HDAC9 -inverse_is_a: HGNC:HDAC6 -inverse_is_a: HGNC:HDAC10 +is_a: FPLX:000220 ! HDAC +relationship: inverse_is_a HGNC:14063 ! HDAC4 +relationship: inverse_is_a HGNC:14068 ! HDAC5 +relationship: inverse_is_a HGNC:14067 ! HDAC7 +relationship: inverse_is_a HGNC:14065 ! HDAC9 +relationship: inverse_is_a HGNC:14064 ! HDAC6 +relationship: inverse_is_a HGNC:18128 ! HDAC10 [Term] -id: FPLX:HDAC_III +id: FPLX:000223 name: HDAC-III synonym: "Class III HDACs" EXACT [] synonym: "class III HDACs" EXACT [] synonym: "class III histone deacetylases" EXACT [] xref: IP:IPR003000 xref: IP:IPR026590 -is_a: FPLX:HDAC -inverse_is_a: HGNC:SIRT1 -inverse_is_a: HGNC:SIRT2 -inverse_is_a: HGNC:SIRT3 -inverse_is_a: HGNC:SIRT4 -inverse_is_a: HGNC:SIRT5 -inverse_is_a: HGNC:SIRT6 -inverse_is_a: HGNC:SIRT7 +is_a: FPLX:000220 ! HDAC +relationship: inverse_is_a HGNC:14929 ! SIRT1 +relationship: inverse_is_a HGNC:10886 ! SIRT2 +relationship: inverse_is_a HGNC:14931 ! SIRT3 +relationship: inverse_is_a HGNC:14932 ! SIRT4 +relationship: inverse_is_a HGNC:14933 ! SIRT5 +relationship: inverse_is_a HGNC:14934 ! SIRT6 +relationship: inverse_is_a HGNC:14935 ! SIRT7 [Term] -id: FPLX:HDAC_IV +id: FPLX:000224 name: HDAC-IV synonym: "Class IV HDACs" EXACT [] synonym: "class IV HDACs" EXACT [] synonym: "class IV histone deacetylases" EXACT [] -is_a: FPLX:HDAC -inverse_is_a: HGNC:HDAC11 +is_a: FPLX:000220 ! HDAC +relationship: inverse_is_a HGNC:19086 ! HDAC11 [Term] -id: FPLX:HDL +id: FPLX:000225 name: HDL synonym: "HDL" EXACT [] synonym: "High-density lipoproteins" EXACT [] xref: BEL:"HDL Complex" xref: GO:0034364 xref: NCIT:C25186 -is_a: FPLX:root -has_part: HGNC:ALB -has_part: HGNC:APOA1 -has_part: HGNC:APOA2 -has_part: HGNC:APOE -has_part: HGNC:CLU +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:399 ! ALB +relationship: has_part HGNC:600 ! APOA1 +relationship: has_part HGNC:601 ! APOA2 +relationship: has_part HGNC:613 ! APOE +relationship: has_part HGNC:2095 ! CLU [Term] -id: FPLX:Hedgehog +id: FPLX:000226 name: Hedgehog synonym: "Hedgehog family" EXACT [] synonym: "hedgehog protein" EXACT [] @@ -3787,99 +3807,99 @@ xref: RE:R-HSA-5358318 xref: RE:R-HSA-5358332 xref: RE:R-HSA-5362382 xref: RE:R-HSA-5362391 -is_a: FPLX:root -inverse_is_a: HGNC:DHH -inverse_is_a: HGNC:IHH -inverse_is_a: HGNC:SHH +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:2865 ! DHH +relationship: inverse_is_a HGNC:5956 ! IHH +relationship: inverse_is_a HGNC:10848 ! SHH [Term] -id: FPLX:Hemoglobin +id: FPLX:000227 name: Hemoglobin synonym: "hemoglobin" EXACT [] xref: BEL:"Hemoglobin Complex" xref: MEDSCAN:urn:agi-protfc:hemoglobin xref: NCIT:C16676 -is_a: FPLX:root -has_part: HGNC:HBA1 -has_part: HGNC:HBA2 -has_part: HGNC:HBB -has_part: HGNC:HBD -has_part: HGNC:HBE1 -has_part: HGNC:HBG1 -has_part: HGNC:HBG2 -has_part: HGNC:HBM -has_part: HGNC:HBQ1 -has_part: HGNC:HBZ - -[Term] -id: FPLX:HES +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:4823 ! HBA1 +relationship: has_part HGNC:4824 ! HBA2 +relationship: has_part HGNC:4827 ! HBB +relationship: has_part HGNC:4829 ! HBD +relationship: has_part HGNC:4830 ! HBE1 +relationship: has_part HGNC:4831 ! HBG1 +relationship: has_part HGNC:4832 ! HBG2 +relationship: has_part HGNC:4826 ! HBM +relationship: has_part HGNC:4833 ! HBQ1 +relationship: has_part HGNC:4835 ! HBZ + +[Term] +id: FPLX:000228 name: HES synonym: "Hes gene family" EXACT [] synonym: "Hes genes" EXACT [] synonym: "HES" EXACT [] synonym: "Hes" EXACT [] xref: BEL:"HES Family" -is_a: FPLX:root -inverse_is_a: HGNC:HES1 -inverse_is_a: HGNC:HES2 -inverse_is_a: HGNC:HES3 -inverse_is_a: HGNC:HES4 -inverse_is_a: HGNC:HES5 -inverse_is_a: HGNC:HES6 -inverse_is_a: HGNC:HES7 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:5192 ! HES1 +relationship: inverse_is_a HGNC:16005 ! HES2 +relationship: inverse_is_a HGNC:26226 ! HES3 +relationship: inverse_is_a HGNC:24149 ! HES4 +relationship: inverse_is_a HGNC:19764 ! HES5 +relationship: inverse_is_a HGNC:18254 ! HES6 +relationship: inverse_is_a HGNC:15977 ! HES7 [Term] -id: FPLX:HIF +id: FPLX:000229 name: HIF synonym: "HIF" EXACT [] synonym: "HIFs" EXACT [] synonym: "hypoxia-inducible factors" EXACT [] xref: NCIT:C113839 xref: RE:R-HSA-1234130 -is_a: FPLX:root -has_part: FPLX:HIF_alpha -has_part: FPLX:HIF_beta +is_a: FPLX:000000 ! famplex +relationship: has_part FPLX:000231 ! HIF_alpha +relationship: has_part FPLX:000232 ! HIF_beta [Term] -id: FPLX:HIF1 +id: FPLX:000230 name: HIF1 synonym: "HIF-1" EXACT [] xref: MEDSCAN:urn:agi-complex:HIF-1 xref: MEDSCAN:urn:agi-complex:prophash-44f61960049704dc2afb23ff7c324b85 xref: NCIT:C17690 xref: XFAM:PF11413 -is_a: FPLX:root -has_part: HGNC:HIF1A -has_part: HGNC:ARNT +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:4910 ! HIF1A +relationship: has_part HGNC:700 ! ARNT [Term] -id: FPLX:HIF_alpha +id: FPLX:000231 name: HIF-alpha synonym: "HIFalpha" EXACT [] synonym: "Hifalpha" EXACT [] synonym: "HIFα" EXACT [] synonym: "Hifα" EXACT [] xref: RE:R-HSA-1234147 -part_of: FPLX:HIF -inverse_is_a: HGNC:HIF1A -inverse_is_a: HGNC:EPAS1 -inverse_is_a: HGNC:HIF3A +relationship: part_of FPLX:000229 ! HIF +relationship: inverse_is_a HGNC:4910 ! HIF1A +relationship: inverse_is_a HGNC:3374 ! EPAS1 +relationship: inverse_is_a HGNC:15825 ! HIF3A [Term] -id: FPLX:HIF_beta +id: FPLX:000232 name: HIF-beta synonym: "HIFbeta" EXACT [] synonym: "Hifbeta" EXACT [] synonym: "HIFβ" EXACT [] synonym: "Hifβ" EXACT [] xref: RE:R-HSA-8936837 -part_of: FPLX:HIF -inverse_is_a: HGNC:ARNT -inverse_is_a: HGNC:ARNT2 -inverse_is_a: HGNC:ARNTL +relationship: part_of FPLX:000229 ! HIF +relationship: inverse_is_a HGNC:700 ! ARNT +relationship: inverse_is_a HGNC:16876 ! ARNT2 +relationship: inverse_is_a HGNC:701 ! ARNTL [Term] -id: FPLX:Histone +id: FPLX:000233 name: Histone synonym: "Histone" EXACT [] synonym: "histone" EXACT [] @@ -3889,34 +3909,34 @@ xref: MEDSCAN:urn:agi-complex:prophash-0f8242e28423189d7ef714808fdcc121 xref: MEDSCAN:urn:agi-protfc:histone xref: MESH:D006657 xref: NCIT:C16687 -is_a: FPLX:root -inverse_is_a: FPLX:Histone_H1 -inverse_is_a: FPLX:Histone_H2A -inverse_is_a: FPLX:Histone_H2B -inverse_is_a: FPLX:Histone_H3 -inverse_is_a: FPLX:Histone_H4 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a FPLX:000234 ! Histone_H1 +relationship: inverse_is_a FPLX:000235 ! Histone_H2A +relationship: inverse_is_a FPLX:000236 ! Histone_H2B +relationship: inverse_is_a FPLX:000237 ! Histone_H3 +relationship: inverse_is_a FPLX:000238 ! Histone_H4 [Term] -id: FPLX:Histone_H1 +id: FPLX:000234 name: Histone-H1 synonym: "histone H1" EXACT [] xref: BEL:"Histone H1 Family" xref: MEDSCAN:urn:agi-protfc:histone%20H1 xref: NCIT:C16683 -is_a: FPLX:Histone -inverse_is_a: HGNC:H1F0 -inverse_is_a: HGNC:H1FOO -inverse_is_a: HGNC:H1FX -inverse_is_a: HGNC:HIST1H1A -inverse_is_a: HGNC:HIST1H1B -inverse_is_a: HGNC:HIST1H1C -inverse_is_a: HGNC:HIST1H1D -inverse_is_a: HGNC:HIST1H1E -inverse_is_a: HGNC:HIST1H1T -inverse_is_a: HGNC:H1FNT - -[Term] -id: FPLX:Histone_H2A +is_a: FPLX:000233 ! Histone +relationship: inverse_is_a HGNC:4714 ! H1F0 +relationship: inverse_is_a HGNC:18463 ! H1FOO +relationship: inverse_is_a HGNC:4722 ! H1FX +relationship: inverse_is_a HGNC:4715 ! HIST1H1A +relationship: inverse_is_a HGNC:4719 ! HIST1H1B +relationship: inverse_is_a HGNC:4716 ! HIST1H1C +relationship: inverse_is_a HGNC:4717 ! HIST1H1D +relationship: inverse_is_a HGNC:4718 ! HIST1H1E +relationship: inverse_is_a HGNC:4720 ! HIST1H1T +relationship: inverse_is_a HGNC:24893 ! H1FNT + +[Term] +id: FPLX:000235 name: Histone-H2A synonym: "Histone 2A" EXACT [] synonym: "Histone H2A" EXACT [] @@ -3925,57 +3945,57 @@ xref: BEL:"Histone H2A Family" xref: MEDSCAN:urn:agi-protfc:histone%20H2A xref: NCIT:C16684 xref: NEXTPROT-FAMILY:01762 -is_a: FPLX:Histone -inverse_is_a: UP:P0C0S8 -inverse_is_a: HGNC:H2AFB1 -inverse_is_a: UP:P0C5Y9 -inverse_is_a: HGNC:H2AFJ -inverse_is_a: HGNC:H2AFV -inverse_is_a: HGNC:H2AFX -inverse_is_a: HGNC:H2AFY -inverse_is_a: HGNC:H2AFY2 -inverse_is_a: HGNC:H2AFZ -inverse_is_a: HGNC:HIST1H2AA -inverse_is_a: HGNC:HIST1H2AC -inverse_is_a: HGNC:HIST1H2AD -inverse_is_a: HGNC:HIST1H2AH -inverse_is_a: HGNC:HIST1H2AJ -inverse_is_a: HGNC:HIST2H2AB -inverse_is_a: HGNC:HIST2H2AC -inverse_is_a: HGNC:HIST3H2A -inverse_is_a: UP:P04908 -inverse_is_a: UP:Q6FI13 - -[Term] -id: FPLX:Histone_H2B +is_a: FPLX:000233 ! Histone +relationship: inverse_is_a UP:P0C0S8 ! H2A1_HUMAN +relationship: inverse_is_a HGNC:22516 ! H2AFB1 +relationship: inverse_is_a UP:P0C5Y9 ! H2AB1_HUMAN +relationship: inverse_is_a HGNC:14456 ! H2AFJ +relationship: inverse_is_a HGNC:20664 ! H2AFV +relationship: inverse_is_a HGNC:4739 ! H2AFX +relationship: inverse_is_a HGNC:4740 ! H2AFY +relationship: inverse_is_a HGNC:14453 ! H2AFY2 +relationship: inverse_is_a HGNC:4741 ! H2AFZ +relationship: inverse_is_a HGNC:18729 ! HIST1H2AA +relationship: inverse_is_a HGNC:4733 ! HIST1H2AC +relationship: inverse_is_a HGNC:4729 ! HIST1H2AD +relationship: inverse_is_a HGNC:13671 ! HIST1H2AH +relationship: inverse_is_a HGNC:4727 ! HIST1H2AJ +relationship: inverse_is_a HGNC:20508 ! HIST2H2AB +relationship: inverse_is_a HGNC:4738 ! HIST2H2AC +relationship: inverse_is_a HGNC:20507 ! HIST3H2A +relationship: inverse_is_a UP:P04908 ! H2A1B_HUMAN +relationship: inverse_is_a UP:Q6FI13 ! H2A2A_HUMAN + +[Term] +id: FPLX:000236 name: Histone-H2B synonym: "H2B" EXACT [] synonym: "histone H2B" EXACT [] xref: BEL:"Histone H2B Family" xref: MEDSCAN:urn:agi-protfc:histone%20H2B -is_a: FPLX:Histone -inverse_is_a: UP:P62807 -inverse_is_a: HGNC:HIST1H2BA -inverse_is_a: HGNC:HIST1H2BB -inverse_is_a: HGNC:HIST1H2BD -inverse_is_a: HGNC:HIST1H2BH -inverse_is_a: HGNC:HIST1H2BJ -inverse_is_a: HGNC:HIST1H2BK -inverse_is_a: HGNC:HIST1H2BL -inverse_is_a: HGNC:HIST1H2BM -inverse_is_a: HGNC:HIST1H2BN -inverse_is_a: HGNC:HIST1H2BO -inverse_is_a: HGNC:HIST2H2BC -inverse_is_a: HGNC:HIST2H2BD -inverse_is_a: HGNC:HIST2H2BE -inverse_is_a: HGNC:HIST2H2BF -inverse_is_a: HGNC:HIST3H2BB -inverse_is_a: HGNC:H2BFS -inverse_is_a: HGNC:H2BFM -inverse_is_a: HGNC:H2BFWT - -[Term] -id: FPLX:Histone_H3 +is_a: FPLX:000233 ! Histone +relationship: inverse_is_a UP:P62807 ! H2B1C_HUMAN +relationship: inverse_is_a HGNC:18730 ! HIST1H2BA +relationship: inverse_is_a HGNC:4751 ! HIST1H2BB +relationship: inverse_is_a HGNC:4747 ! HIST1H2BD +relationship: inverse_is_a HGNC:4755 ! HIST1H2BH +relationship: inverse_is_a HGNC:4761 ! HIST1H2BJ +relationship: inverse_is_a HGNC:13954 ! HIST1H2BK +relationship: inverse_is_a HGNC:4748 ! HIST1H2BL +relationship: inverse_is_a HGNC:4750 ! HIST1H2BM +relationship: inverse_is_a HGNC:4749 ! HIST1H2BN +relationship: inverse_is_a HGNC:4758 ! HIST1H2BO +relationship: inverse_is_a HGNC:20516 ! HIST2H2BC +relationship: inverse_is_a HGNC:20517 ! HIST2H2BD +relationship: inverse_is_a HGNC:4760 ! HIST2H2BE +relationship: inverse_is_a HGNC:24700 ! HIST2H2BF +relationship: inverse_is_a HGNC:20514 ! HIST3H2BB +relationship: inverse_is_a HGNC:4762 ! H2BFS +relationship: inverse_is_a HGNC:27867 ! H2BFM +relationship: inverse_is_a HGNC:27252 ! H2BFWT + +[Term] +id: FPLX:000237 name: Histone-H3 synonym: "H3" EXACT [] synonym: "histone H3" EXACT [] @@ -3985,15 +4005,15 @@ xref: IP:IPR000164 xref: MEDSCAN:urn:agi-protfc:histone%20H3 xref: NCIT:C16685 xref: NEXTPROT-FAMILY:01764 -is_a: FPLX:Histone -inverse_is_a: UP:P68431 -inverse_is_a: UP:Q71DI3 -inverse_is_a: HGNC:HIST3H3 -inverse_is_a: UP:P84243 -inverse_is_a: HGNC:H3F3C +is_a: FPLX:000233 ! Histone +relationship: inverse_is_a UP:P68431 ! H31_HUMAN +relationship: inverse_is_a UP:Q71DI3 ! H32_HUMAN +relationship: inverse_is_a HGNC:4778 ! HIST3H3 +relationship: inverse_is_a UP:P84243 ! H33_HUMAN +relationship: inverse_is_a HGNC:33164 ! H3F3C [Term] -id: FPLX:Histone_H4 +id: FPLX:000238 name: Histone-H4 synonym: "histone H4" EXACT [] xref: BEL:"Histone H4 Family" @@ -4001,25 +4021,25 @@ xref: IP:IPR001951 xref: MEDSCAN:urn:agi-protfc:histone%20H4 xref: NCIT:C16686 xref: NEXTPROT-FAMILY:01765 -is_a: FPLX:Histone -inverse_is_a: UP:P62805 -inverse_is_a: HGNC:HIST1H4G +is_a: FPLX:000233 ! Histone +relationship: inverse_is_a UP:P62805 ! H4_HUMAN +relationship: inverse_is_a HGNC:4792 ! HIST1H4G [Term] -id: FPLX:HLA_DR +id: FPLX:000239 name: HLA-DR synonym: "HLA-DR" EXACT [] xref: BEL:"HLA-DR Family" xref: NCIT:C16692 -is_a: FPLX:root -inverse_is_a: HGNC:HLA-DRA -inverse_is_a: HGNC:HLA-DRB1 -inverse_is_a: HGNC:HLA-DRB3 -inverse_is_a: HGNC:HLA-DRB4 -inverse_is_a: HGNC:HLA-DRB5 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:4947 ! HLA-DRA +relationship: inverse_is_a HGNC:4948 ! HLA-DRB1 +relationship: inverse_is_a HGNC:4951 ! HLA-DRB3 +relationship: inverse_is_a HGNC:4952 ! HLA-DRB4 +relationship: inverse_is_a HGNC:4953 ! HLA-DRB5 [Term] -id: FPLX:HMOX +id: FPLX:000240 name: HMOX synonym: "haem oxygenase" EXACT [] synonym: "heme oxygenase" EXACT [] @@ -4030,86 +4050,86 @@ xref: IP:IPR016053 xref: IP:IPR016084 xref: IP:IPR018207 xref: RE:R-HSA-189382 -is_a: FPLX:root -inverse_is_a: HGNC:HMOX1 -inverse_is_a: HGNC:HMOX2 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:5013 ! HMOX1 +relationship: inverse_is_a HGNC:5014 ! HMOX2 [Term] -id: FPLX:HSP90 +id: FPLX:000241 name: HSP90 synonym: "HSP90" EXACT [] synonym: "Hsp90" EXACT [] xref: BEL:"HSP90 Family" xref: NCIT:C17766 xref: XFAM:PF00183 -is_a: FPLX:root -inverse_is_a: FPLX:HSP90A -inverse_is_a: HGNC:HSP90B1 -inverse_is_a: HGNC:TRAP1 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a FPLX:000242 ! HSP90A +relationship: inverse_is_a HGNC:12028 ! HSP90B1 +relationship: inverse_is_a HGNC:16264 ! TRAP1 [Term] -id: FPLX:HSP90A +id: FPLX:000242 name: HSP90A synonym: "HSP90A" EXACT [] xref: RE:R-HSA-3371429 xref: RE:R-HSA-419619 xref: RE:R-HSA-5082395 xref: RE:R-HSA-5618088 -is_a: FPLX:HSP90 -inverse_is_a: FPLX:HSP90AA -inverse_is_a: HGNC:HSP90AB1 +is_a: FPLX:000241 ! HSP90 +relationship: inverse_is_a FPLX:000243 ! HSP90AA +relationship: inverse_is_a HGNC:5258 ! HSP90AB1 [Term] -id: FPLX:HSP90AA +id: FPLX:000243 name: HSP90AA synonym: "HSP90AA" EXACT [] xref: RE:R-HSA-1218829 xref: RE:R-HSA-1221657 xref: RE:R-HSA-5082406 -is_a: FPLX:HSP90A -inverse_is_a: HGNC:HSP90AA1 +is_a: FPLX:000242 ! HSP90A +relationship: inverse_is_a HGNC:5253 ! HSP90AA1 [Term] -id: FPLX:HSPA +id: FPLX:000244 name: HSPA synonym: "Heat Shock Protein 70" EXACT [] synonym: "HSP70" EXACT [] synonym: "Hsp70" EXACT [] xref: BEL:"HSPA Family" xref: XFAM:PF00012 -is_a: FPLX:root -inverse_is_a: HGNC:HSPA12A -inverse_is_a: HGNC:HSPA12B -inverse_is_a: HGNC:HSPA13 -inverse_is_a: HGNC:HSPA14 -inverse_is_a: HGNC:HSPA1A -inverse_is_a: HGNC:HSPA1B -inverse_is_a: HGNC:HSPA1L -inverse_is_a: HGNC:HSPA2 -inverse_is_a: HGNC:HSPA4 -inverse_is_a: HGNC:HSPA4L -inverse_is_a: HGNC:HSPA5 -inverse_is_a: HGNC:HSPA6 -inverse_is_a: HGNC:HSPA8 -inverse_is_a: HGNC:HSPA9 -inverse_is_a: HGNC:HSPH1 -inverse_is_a: HGNC:HYOU1 - -[Term] -id: FPLX:HSPB +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:19022 ! HSPA12A +relationship: inverse_is_a HGNC:16193 ! HSPA12B +relationship: inverse_is_a HGNC:11375 ! HSPA13 +relationship: inverse_is_a HGNC:29526 ! HSPA14 +relationship: inverse_is_a HGNC:5232 ! HSPA1A +relationship: inverse_is_a HGNC:5233 ! HSPA1B +relationship: inverse_is_a HGNC:5234 ! HSPA1L +relationship: inverse_is_a HGNC:5235 ! HSPA2 +relationship: inverse_is_a HGNC:5237 ! HSPA4 +relationship: inverse_is_a HGNC:17041 ! HSPA4L +relationship: inverse_is_a HGNC:5238 ! HSPA5 +relationship: inverse_is_a HGNC:5239 ! HSPA6 +relationship: inverse_is_a HGNC:5241 ! HSPA8 +relationship: inverse_is_a HGNC:5244 ! HSPA9 +relationship: inverse_is_a HGNC:16969 ! HSPH1 +relationship: inverse_is_a HGNC:16931 ! HYOU1 + +[Term] +id: FPLX:000245 name: HSPB synonym: "heat shock protein family B" EXACT [] synonym: "HSPB proteins" EXACT [] synonym: "HSPB" EXACT [] synonym: "small HSPs" EXACT [] xref: BEL:"HSPB Family" -is_a: FPLX:root -inverse_is_a: HGNC:HSPB1 -inverse_is_a: HGNC:HSPB2 -inverse_is_a: HGNC:HSPB8 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:5246 ! HSPB1 +relationship: inverse_is_a HGNC:5247 ! HSPB2 +relationship: inverse_is_a HGNC:30171 ! HSPB8 [Term] -id: FPLX:IFNA +id: FPLX:000246 name: IFNA synonym: "IFN-a" EXACT [] synonym: "IFN-alpha" EXACT [] @@ -4118,23 +4138,23 @@ synonym: "IFNalpha" EXACT [] synonym: "IFNα" EXACT [] xref: BEL:"IFNA Family" xref: RE:R-HSA-909688 -is_a: FPLX:Interferon -inverse_is_a: HGNC:IFNA1 -inverse_is_a: HGNC:IFNA2 -inverse_is_a: HGNC:IFNA4 -inverse_is_a: HGNC:IFNA5 -inverse_is_a: HGNC:IFNA6 -inverse_is_a: HGNC:IFNA7 -inverse_is_a: HGNC:IFNA8 -inverse_is_a: HGNC:IFNA10 -inverse_is_a: HGNC:IFNA13 -inverse_is_a: HGNC:IFNA14 -inverse_is_a: HGNC:IFNA16 -inverse_is_a: HGNC:IFNA17 -inverse_is_a: HGNC:IFNA21 - -[Term] -id: FPLX:IFNB +is_a: FPLX:000262 ! Interferon +relationship: inverse_is_a HGNC:5417 ! IFNA1 +relationship: inverse_is_a HGNC:5423 ! IFNA2 +relationship: inverse_is_a HGNC:5425 ! IFNA4 +relationship: inverse_is_a HGNC:5426 ! IFNA5 +relationship: inverse_is_a HGNC:5427 ! IFNA6 +relationship: inverse_is_a HGNC:5428 ! IFNA7 +relationship: inverse_is_a HGNC:5429 ! IFNA8 +relationship: inverse_is_a HGNC:5418 ! IFNA10 +relationship: inverse_is_a HGNC:5419 ! IFNA13 +relationship: inverse_is_a HGNC:5420 ! IFNA14 +relationship: inverse_is_a HGNC:5421 ! IFNA16 +relationship: inverse_is_a HGNC:5422 ! IFNA17 +relationship: inverse_is_a HGNC:5424 ! IFNA21 + +[Term] +id: FPLX:000247 name: IFNB synonym: "beta interferons" EXACT [] synonym: "IFN-beta" EXACT [] @@ -4146,11 +4166,11 @@ synonym: "interferon β" EXACT [] synonym: "β interferons" EXACT [] xref: IP:IPR015588 xref: NCIT:C20495 -is_a: FPLX:Interferon -inverse_is_a: HGNC:IFNB1 +is_a: FPLX:000262 ! Interferon +relationship: inverse_is_a HGNC:5434 ! IFNB1 [Term] -id: FPLX:IGFBP +id: FPLX:000248 name: IGFBP synonym: "IGF-BP" EXACT [] synonym: "IGFBP" EXACT [] @@ -4159,25 +4179,25 @@ synonym: "insulin-like growth factor binding proteins" EXACT [] xref: BEL:"IGFBP Family" xref: MEDSCAN:urn:agi-aopfc:0000586 xref: XFAM:PF00219 -is_a: FPLX:root -inverse_is_a: HGNC:IGFBP1 -inverse_is_a: HGNC:IGFBP2 -inverse_is_a: HGNC:IGFBP3 -inverse_is_a: HGNC:IGFBP4 -inverse_is_a: HGNC:IGFBP5 -inverse_is_a: HGNC:IGFBP6 -inverse_is_a: HGNC:IGFBP7 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:5469 ! IGFBP1 +relationship: inverse_is_a HGNC:5471 ! IGFBP2 +relationship: inverse_is_a HGNC:5472 ! IGFBP3 +relationship: inverse_is_a HGNC:5473 ! IGFBP4 +relationship: inverse_is_a HGNC:5474 ! IGFBP5 +relationship: inverse_is_a HGNC:5475 ! IGFBP6 +relationship: inverse_is_a HGNC:5476 ! IGFBP7 [Term] -id: FPLX:IKB +id: FPLX:000249 name: IKB synonym: "IkappaB" EXACT [] synonym: "IκB" EXACT [] xref: NCIT:C17583 -is_a: FPLX:root +is_a: FPLX:000000 ! famplex [Term] -id: FPLX:IKK_complex +id: FPLX:000250 name: IKK-complex synonym: "IKK complex" EXACT [] xref: BEL:"IkappaB Kinase Complex" @@ -4189,13 +4209,13 @@ xref: RE:R-HSA-202513 xref: RE:R-HSA-202562 xref: RE:R-HSA-5262981 xref: RE:R-HSA-727820 -is_a: FPLX:root -has_part: HGNC:CHUK -has_part: HGNC:IKBKB -has_part: HGNC:IKBKG +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:1974 ! CHUK +relationship: has_part HGNC:5960 ! IKBKB +relationship: has_part HGNC:5961 ! IKBKG [Term] -id: FPLX:IKK_family +id: FPLX:000251 name: IKK-family synonym: "IkappaB kinase" EXACT [] synonym: "IKK" EXACT [] @@ -4203,15 +4223,15 @@ synonym: "IκB kinase" EXACT [] xref: BEL:"IkappaB Kinase Family" xref: NCIT:C104199 xref: NEXTPROT-FAMILY:03104 -is_a: FPLX:root -inverse_is_a: HGNC:CHUK -inverse_is_a: HGNC:IKBKB -inverse_is_a: HGNC:IKBKG -inverse_is_a: HGNC:IKBKE -inverse_is_a: HGNC:TBK1 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:1974 ! CHUK +relationship: inverse_is_a HGNC:5960 ! IKBKB +relationship: inverse_is_a HGNC:5961 ! IKBKG +relationship: inverse_is_a HGNC:14552 ! IKBKE +relationship: inverse_is_a HGNC:11584 ! TBK1 [Term] -id: FPLX:IL1 +id: FPLX:000252 name: IL1 synonym: "IL-1" EXACT [] synonym: "IL1 family" EXACT [] @@ -4222,12 +4242,12 @@ xref: NCIT:C20506 xref: NEXTPROT-FAMILY:01820 xref: XFAM:PF00340 xref: RE:R-HSA-445744 -is_a: FPLX:root -inverse_is_a: HGNC:IL1A -inverse_is_a: HGNC:IL1B +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:5991 ! IL1A +relationship: inverse_is_a HGNC:5992 ! IL1B [Term] -id: FPLX:IL12 +id: FPLX:000253 name: IL12 synonym: "IL-12" EXACT [] synonym: "IL12" EXACT [] @@ -4238,67 +4258,67 @@ xref: RE:R-HSA-447102 xref: RE:R-HSA-8950122 xref: RE:R-HSA-8950228 xref: RE:R-HSA-8950694 -is_a: FPLX:root -inverse_is_a: HGNC:IL12A -inverse_is_a: HGNC:IL12B +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:5969 ! IL12A +relationship: inverse_is_a HGNC:5970 ! IL12B [Term] -id: FPLX:IL15R +id: FPLX:000254 name: IL15R synonym: "IL-15 receptor" EXACT [] synonym: "IL-15R" EXACT [] -is_a: FPLX:root -has_part: HGNC:IL15RA -has_part: HGNC:IL2RB -has_part: HGNC:IL2RG +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:5978 ! IL15RA +relationship: has_part HGNC:6009 ! IL2RB +relationship: has_part HGNC:6010 ! IL2RG [Term] -id: FPLX:IL2R +id: FPLX:000255 name: IL2R synonym: "IL-2 receptor" EXACT [] synonym: "IL-2R" EXACT [] -is_a: FPLX:root -has_part: HGNC:IL2RA -has_part: HGNC:IL2RB -has_part: HGNC:IL2RG +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:6008 ! IL2RA +relationship: has_part HGNC:6009 ! IL2RB +relationship: has_part HGNC:6010 ! IL2RG [Term] -id: FPLX:Inhibin +id: FPLX:000256 name: Inhibin synonym: "Inhibin" EXACT [] synonym: "inhibin" EXACT [] xref: GO:0043511 xref: NCIT:C2276 xref: RE:R-HSA-1449688 -is_a: FPLX:root -inverse_is_a: FPLX:Inhibin_A -inverse_is_a: FPLX:Inhibin_B +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a FPLX:000257 ! Inhibin_A +relationship: inverse_is_a FPLX:000258 ! Inhibin_B [Term] -id: FPLX:Inhibin_A +id: FPLX:000257 name: Inhibin-A synonym: "inhibin A" EXACT [] synonym: "inhibin-A" EXACT [] synonym: "inhibin-a" EXACT [] xref: MEDSCAN:urn:agi-complex:inhibin%20A xref: NCIT:C2277 -is_a: FPLX:Inhibin -has_part: HGNC:INHA -has_part: HGNC:INHBA +is_a: FPLX:000256 ! Inhibin +relationship: has_part HGNC:6065 ! INHA +relationship: has_part HGNC:6066 ! INHBA [Term] -id: FPLX:Inhibin_B +id: FPLX:000258 name: Inhibin-B synonym: "inhibin B" EXACT [] synonym: "inhibin-B" EXACT [] synonym: "inhibin-b" EXACT [] xref: NCIT:C2278 -is_a: FPLX:Inhibin -has_part: HGNC:INHA -has_part: HGNC:INHBB +is_a: FPLX:000256 ! Inhibin +relationship: has_part HGNC:6065 ! INHA +relationship: has_part HGNC:6067 ! INHBB [Term] -id: FPLX:INS +id: FPLX:000259 name: INS synonym: "insulin family" EXACT [] xref: BEL:"INS Family" @@ -4310,11 +4330,11 @@ xref: RE:R-HSA-429407 xref: RE:R-HSA-429472 xref: RE:R-HSA-74674 xref: RE:R-HSA-77385 -is_a: FPLX:root -inverse_is_a: HGNC:INS +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:6081 ! INS [Term] -id: FPLX:INSR +id: FPLX:000260 name: INSR synonym: "Insulin receptor family" EXACT [] synonym: "insulin receptor family" EXACT [] @@ -4323,13 +4343,13 @@ xref: BEL:"INSR Family" xref: IP:IPR016246 xref: MEDSCAN:urn:agi-aopfc:0000264 xref: NEXTPROT-FAMILY:03128 -is_a: FPLX:root -inverse_is_a: HGNC:IGF1R -inverse_is_a: HGNC:INSR -inverse_is_a: HGNC:INSRR +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:5465 ! IGF1R +relationship: inverse_is_a HGNC:6091 ! INSR +relationship: inverse_is_a HGNC:6093 ! INSRR [Term] -id: FPLX:Integrins +id: FPLX:000261 name: Integrins synonym: "alpha2beta1 integrin" EXACT [] synonym: "integrin" EXACT [] @@ -4342,24 +4362,24 @@ xref: GO:0034683 xref: GO:0034687 xref: MEDSCAN:urn:agi-complex:MAC-1%20(integrin) xref: NCIT:C16748 -is_a: FPLX:root +is_a: FPLX:000000 ! famplex [Term] -id: FPLX:Interferon +id: FPLX:000262 name: Interferon synonym: "IFN" EXACT [] synonym: "interferon" EXACT [] xref: MEDSCAN:urn:agi-protfc:interferon xref: NCIT:C20493 xref: XFAM:PF00143 -is_a: FPLX:root -inverse_is_a: FPLX:IFNA -inverse_is_a: FPLX:IFNB -inverse_is_a: HGNC:IFNK -inverse_is_a: HGNC:IFNW1 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a FPLX:000246 ! IFNA +relationship: inverse_is_a FPLX:000247 ! IFNB +relationship: inverse_is_a HGNC:21714 ! IFNK +relationship: inverse_is_a HGNC:5448 ! IFNW1 [Term] -id: FPLX:Interferon_gamma_receptor +id: FPLX:000263 name: Interferon-gamma-receptor synonym: "IFNGR" EXACT [] synonym: "interferon gamma receptor" EXACT [] @@ -4368,12 +4388,12 @@ synonym: "interferon-gamma receptor" EXACT [] synonym: "interferon-γ receptor" EXACT [] xref: BEL:"Interferon Gamma Receptor Complex" xref: MEDSCAN:urn:agi-complex:IFNGR -is_a: FPLX:root -has_part: HGNC:IFNGR1 -has_part: HGNC:IFNGR2 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:5439 ! IFNGR1 +relationship: has_part HGNC:5440 ! IFNGR2 [Term] -id: FPLX:IRS +id: FPLX:000264 name: IRS synonym: "insulin receptor substrate" EXACT [] synonym: "IRS family" EXACT [] @@ -4383,30 +4403,30 @@ xref: MEDSCAN:urn:agi-aopfc:0000585 xref: XFAM:PF02174 xref: RE:R-HSA-2445131 xref: RE:R-HSA-2445139 -is_a: FPLX:root -inverse_is_a: HGNC:IRS1 -inverse_is_a: HGNC:IRS2 -inverse_is_a: HGNC:IRS4 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:6125 ! IRS1 +relationship: inverse_is_a HGNC:6126 ! IRS2 +relationship: inverse_is_a HGNC:6128 ! IRS4 [Term] -id: FPLX:IRX +id: FPLX:000265 name: IRX synonym: "homeodomain iroquois proteins" EXACT [] synonym: "Iroquois family" EXACT [] synonym: "Iroquois proteins" EXACT [] synonym: "Iroquois-class homeodomain proteins" EXACT [] xref: BEL:"IRX Family" -is_a: FPLX:root -inverse_is_a: HGNC:IRX1 -inverse_is_a: HGNC:IRX2 -inverse_is_a: HGNC:IRX3 -inverse_is_a: HGNC:IRX4 -inverse_is_a: HGNC:IRX5 -inverse_is_a: HGNC:IRX6 -inverse_is_a: HGNC:MKX +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:14358 ! IRX1 +relationship: inverse_is_a HGNC:14359 ! IRX2 +relationship: inverse_is_a HGNC:14360 ! IRX3 +relationship: inverse_is_a HGNC:6129 ! IRX4 +relationship: inverse_is_a HGNC:14361 ! IRX5 +relationship: inverse_is_a HGNC:14675 ! IRX6 +relationship: inverse_is_a HGNC:23729 ! MKX [Term] -id: FPLX:JAK +id: FPLX:000266 name: JAK synonym: "JAK" EXACT [] synonym: "Jak" EXACT [] @@ -4415,14 +4435,14 @@ xref: BEL:"JAK Family" xref: IP:IPR016251 xref: MEDSCAN:urn:agi-aopfc:0000464 xref: NEXTPROT-FAMILY:03129 -is_a: FPLX:root -inverse_is_a: HGNC:JAK1 -inverse_is_a: HGNC:JAK2 -inverse_is_a: HGNC:JAK3 -inverse_is_a: HGNC:TYK2 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:6190 ! JAK1 +relationship: inverse_is_a HGNC:6192 ! JAK2 +relationship: inverse_is_a HGNC:6193 ! JAK3 +relationship: inverse_is_a HGNC:12440 ! TYK2 [Term] -id: FPLX:JNK +id: FPLX:000267 name: JNK synonym: "c-JNK" EXACT [] synonym: "c-Jun N-terminal kinase" EXACT [] @@ -4438,66 +4458,66 @@ xref: RE:R-HSA-450226 xref: RE:R-HSA-450253 xref: RE:R-HSA-450289 xref: SIGNOR:SIGNOR-PF15 -is_a: FPLX:MAPK -inverse_is_a: HGNC:MAPK8 -inverse_is_a: HGNC:MAPK9 -inverse_is_a: HGNC:MAPK10 +is_a: FPLX:000283 ! MAPK +relationship: inverse_is_a HGNC:6881 ! MAPK8 +relationship: inverse_is_a HGNC:6886 ! MAPK9 +relationship: inverse_is_a HGNC:6872 ! MAPK10 [Term] -id: FPLX:JUN_family +id: FPLX:000268 name: JUN-family synonym: "JUN" EXACT [] xref: IP:IPR002112 xref: IP:IPR005643 xref: MEDSCAN:urn:agi-complex:prophash-8d885376e30916afd0b47ccf1b044e75 -part_of: FPLX:AP1 -inverse_is_a: HGNC:JUN -inverse_is_a: HGNC:JUNB -inverse_is_a: HGNC:JUND +relationship: part_of FPLX:000048 ! AP1 +relationship: inverse_is_a HGNC:6204 ! JUN +relationship: inverse_is_a HGNC:6205 ! JUNB +relationship: inverse_is_a HGNC:6206 ! JUND [Term] -id: FPLX:Kainate_family +id: FPLX:000269 name: Kainate-family synonym: "Glutamate receptors, ionotropic, kainate" EXACT [] synonym: "Kainate receptors" EXACT [] synonym: "KARs" EXACT [] xref: GFAM:1199 -is_a: FPLX:root -inverse_is_a: HGNC:GRIK1 -inverse_is_a: HGNC:GRIK2 -inverse_is_a: HGNC:GRIK3 -inverse_is_a: HGNC:GRIK4 -inverse_is_a: HGNC:GRIK5 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:4579 ! GRIK1 +relationship: inverse_is_a HGNC:4580 ! GRIK2 +relationship: inverse_is_a HGNC:4581 ! GRIK3 +relationship: inverse_is_a HGNC:4582 ! GRIK4 +relationship: inverse_is_a HGNC:4583 ! GRIK5 [Term] -id: FPLX:Kinetochore +id: FPLX:000270 name: Kinetochore synonym: "kinetochore complex" EXACT [] synonym: "kinetochore" EXACT [] synonym: "kinetochores" EXACT [] xref: BEL:"Kinetochore Complex" xref: GO:0000776 -is_a: FPLX:root -has_part: HGNC:BUB1 -has_part: HGNC:BUB1B -has_part: HGNC:BUB3 -has_part: HGNC:CENPC -has_part: HGNC:CENPE -has_part: HGNC:CENPF -has_part: HGNC:CENPH -has_part: HGNC:DCTN2 -has_part: HGNC:KIF22 -has_part: HGNC:MAD2L1 -has_part: HGNC:PAFAH1B1 -has_part: HGNC:PSEN1 -has_part: HGNC:PSEN2 -has_part: HGNC:SMC1A -has_part: HGNC:SUGT1 -has_part: HGNC:SUMO3 -has_part: HGNC:ZW10 - -[Term] -id: FPLX:KLK +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:1148 ! BUB1 +relationship: has_part HGNC:1149 ! BUB1B +relationship: has_part HGNC:1151 ! BUB3 +relationship: has_part HGNC:1854 ! CENPC +relationship: has_part HGNC:1856 ! CENPE +relationship: has_part HGNC:1857 ! CENPF +relationship: has_part HGNC:17268 ! CENPH +relationship: has_part HGNC:2712 ! DCTN2 +relationship: has_part HGNC:6391 ! KIF22 +relationship: has_part HGNC:6763 ! MAD2L1 +relationship: has_part HGNC:8574 ! PAFAH1B1 +relationship: has_part HGNC:9508 ! PSEN1 +relationship: has_part HGNC:9509 ! PSEN2 +relationship: has_part HGNC:11111 ! SMC1A +relationship: has_part HGNC:16987 ! SUGT1 +relationship: has_part HGNC:11124 ! SUMO3 +relationship: has_part HGNC:13194 ! ZW10 + +[Term] +id: FPLX:000271 name: KLK synonym: "kallikrein" EXACT [] synonym: "kallikrein-related peptidases" EXACT [] @@ -4507,47 +4527,47 @@ synonym: "tissue kallikreins" EXACT [] xref: BEL:"KLK Family" xref: ECCODE:3.4.21.35 xref: MEDSCAN:urn:agi-protfc:kallikrein -is_a: FPLX:root -inverse_is_a: HGNC:KLK1 -inverse_is_a: HGNC:KLK10 -inverse_is_a: HGNC:KLK11 -inverse_is_a: HGNC:KLK12 -inverse_is_a: HGNC:KLK13 -inverse_is_a: HGNC:KLK14 -inverse_is_a: HGNC:KLK15 -inverse_is_a: HGNC:KLK2 -inverse_is_a: HGNC:KLK3 -inverse_is_a: HGNC:KLK4 -inverse_is_a: HGNC:KLK5 -inverse_is_a: HGNC:KLK6 -inverse_is_a: HGNC:KLK7 -inverse_is_a: HGNC:KLK8 -inverse_is_a: HGNC:KLK9 -inverse_is_a: HGNC:KLKB1 - -[Term] -id: FPLX:KSR +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:6357 ! KLK1 +relationship: inverse_is_a HGNC:6358 ! KLK10 +relationship: inverse_is_a HGNC:6359 ! KLK11 +relationship: inverse_is_a HGNC:6360 ! KLK12 +relationship: inverse_is_a HGNC:6361 ! KLK13 +relationship: inverse_is_a HGNC:6362 ! KLK14 +relationship: inverse_is_a HGNC:20453 ! KLK15 +relationship: inverse_is_a HGNC:6363 ! KLK2 +relationship: inverse_is_a HGNC:6364 ! KLK3 +relationship: inverse_is_a HGNC:6365 ! KLK4 +relationship: inverse_is_a HGNC:6366 ! KLK5 +relationship: inverse_is_a HGNC:6367 ! KLK6 +relationship: inverse_is_a HGNC:6368 ! KLK7 +relationship: inverse_is_a HGNC:6369 ! KLK8 +relationship: inverse_is_a HGNC:6370 ! KLK9 +relationship: inverse_is_a HGNC:6371 ! KLKB1 + +[Term] +id: FPLX:000272 name: KSR synonym: "KSR" EXACT [] xref: IP:IPR025561 -is_a: FPLX:root -inverse_is_a: HGNC:KSR1 -inverse_is_a: HGNC:KSR2 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:6465 ! KSR1 +relationship: inverse_is_a HGNC:18610 ! KSR2 [Term] -id: FPLX:Laminin_111 +id: FPLX:000273 name: Laminin-111 synonym: "LM-1" EXACT [] xref: BEL:"Laminin 1 Complex" xref: RE:R-HSA-215989 xref: RE:R-HSA-2426371 -is_a: FPLX:root -has_part: HGNC:LAMA1 -has_part: HGNC:LAMB1 -has_part: HGNC:LAMC1 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:6481 ! LAMA1 +relationship: has_part HGNC:6486 ! LAMB1 +relationship: has_part HGNC:6492 ! LAMC1 [Term] -id: FPLX:Laminin_332 +id: FPLX:000274 name: Laminin-332 synonym: "laminin 332 chains" EXACT [] synonym: "laminin 332" EXACT [] @@ -4561,25 +4581,25 @@ xref: RE:R-HSA-216001 xref: RE:R-HSA-2220790 xref: RE:R-HSA-2399659 xref: RE:R-HSA-2533911 -is_a: FPLX:root -has_part: HGNC:LAMA3 -has_part: HGNC:LAMB3 -has_part: HGNC:LAMC2 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:6483 ! LAMA3 +relationship: has_part HGNC:6490 ! LAMB3 +relationship: has_part HGNC:6493 ! LAMC2 [Term] -id: FPLX:LDH +id: FPLX:000275 name: LDH synonym: "LDH" EXACT [] xref: BEL:"LDH Family" xref: NCIT:C25184 xref: NEXTPROT-FAMILY:02022 -is_a: FPLX:root -inverse_is_a: HGNC:LDHA -inverse_is_a: HGNC:LDHB -inverse_is_a: HGNC:LDHC +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:6535 ! LDHA +relationship: inverse_is_a HGNC:6541 ! LDHB +relationship: inverse_is_a HGNC:6544 ! LDHC [Term] -id: FPLX:LH +id: FPLX:000276 name: LH synonym: "LH" EXACT [] synonym: "Luteinizing hormone" EXACT [] @@ -4590,21 +4610,21 @@ xref: MEDSCAN:urn:agi-complex:Luteinizing%20hormone xref: RE:R-HSA-378969 xref: RE:R-HSA-6793931 xref: RE:R-HSA-6793934 -is_a: FPLX:root -has_part: HGNC:CGA -has_part: HGNC:LHB +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:1885 ! CGA +relationship: has_part HGNC:6584 ! LHB [Term] -id: FPLX:LPAR +id: FPLX:000277 name: LPAR xref: SIGNOR:SIGNOR-PF2 -is_a: FPLX:root -inverse_is_a: HGNC:LPAR1 -inverse_is_a: HGNC:LPAR2 -inverse_is_a: HGNC:LPAR3 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:3166 ! LPAR1 +relationship: inverse_is_a HGNC:3168 ! LPAR2 +relationship: inverse_is_a HGNC:14298 ! LPAR3 [Term] -id: FPLX:MAC +id: FPLX:000278 name: MAC synonym: "MAC" EXACT [] synonym: "membrane attack complex" EXACT [] @@ -4613,17 +4633,17 @@ xref: BEL:"Membrane Attack Complex" xref: GO:0005579 xref: RE:R-HSA-173728 xref: RE:R-HSA-8852568 -is_a: FPLX:root -has_part: HGNC:C5 -has_part: HGNC:C6 -has_part: HGNC:C7 -has_part: HGNC:C8A -has_part: HGNC:C8B -has_part: HGNC:C8G -has_part: HGNC:C9 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:1331 ! C5 +relationship: has_part HGNC:1339 ! C6 +relationship: has_part HGNC:1346 ! C7 +relationship: has_part HGNC:1352 ! C8A +relationship: has_part HGNC:1353 ! C8B +relationship: has_part HGNC:1354 ! C8G +relationship: has_part HGNC:1358 ! C9 [Term] -id: FPLX:MAF +id: FPLX:000279 name: MAF synonym: "Maf subfamily" EXACT [] synonym: "MAF" EXACT [] @@ -4633,71 +4653,71 @@ xref: BEL:"MAF Family" xref: IP:IPR004826 xref: MEDSCAN:urn:agi-aopfc:0000142 xref: XFAM:PF02545 -is_a: FPLX:root -inverse_is_a: HGNC:MAF -inverse_is_a: HGNC:MAFA -inverse_is_a: HGNC:MAFB -inverse_is_a: HGNC:MAFF -inverse_is_a: HGNC:MAFG -inverse_is_a: HGNC:MAFK +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:6776 ! MAF +relationship: inverse_is_a HGNC:23145 ! MAFA +relationship: inverse_is_a HGNC:6408 ! MAFB +relationship: inverse_is_a HGNC:6780 ! MAFF +relationship: inverse_is_a HGNC:6781 ! MAFG +relationship: inverse_is_a HGNC:6782 ! MAFK [Term] -id: FPLX:MAP1LC3 +id: FPLX:000280 name: MAP1LC3 synonym: "LC3" EXACT [] xref: IP:IPR004241 -is_a: FPLX:root -inverse_is_a: HGNC:MAP1LC3A -inverse_is_a: HGNC:MAP1LC3B -inverse_is_a: HGNC:MAP1LC3B2 -inverse_is_a: HGNC:MAP1LC3C +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:6838 ! MAP1LC3A +relationship: inverse_is_a HGNC:13352 ! MAP1LC3B +relationship: inverse_is_a HGNC:34390 ! MAP1LC3B2 +relationship: inverse_is_a HGNC:13353 ! MAP1LC3C [Term] -id: FPLX:MAP2K +id: FPLX:000281 name: MAP2K synonym: "MAPK kinase" EXACT [] synonym: "mitogen-activated protein kinase kinase" EXACT [] xref: NCIT:C105947 -is_a: FPLX:root -inverse_is_a: FPLX:MEK -inverse_is_a: HGNC:MAP2K3 -inverse_is_a: HGNC:MAP2K4 -inverse_is_a: HGNC:MAP2K5 -inverse_is_a: HGNC:MAP2K6 -inverse_is_a: HGNC:MAP2K7 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a FPLX:000286 ! MEK +relationship: inverse_is_a HGNC:6843 ! MAP2K3 +relationship: inverse_is_a HGNC:6844 ! MAP2K4 +relationship: inverse_is_a HGNC:6845 ! MAP2K5 +relationship: inverse_is_a HGNC:6846 ! MAP2K6 +relationship: inverse_is_a HGNC:6847 ! MAP2K7 [Term] -id: FPLX:MAP3K +id: FPLX:000282 name: MAP3K synonym: "MAP3K" EXACT [] synonym: "MAPK kinase kinase" EXACT [] synonym: "MAPKK kinases" EXACT [] synonym: "MAPKKK" EXACT [] xref: ECCODE:2.7.11.25 -is_a: FPLX:root -inverse_is_a: FPLX:RAF -inverse_is_a: HGNC:MAP3K1 -inverse_is_a: HGNC:MAP3K2 -inverse_is_a: HGNC:MAP3K3 -inverse_is_a: HGNC:MAP3K4 -inverse_is_a: HGNC:MAP3K5 -inverse_is_a: HGNC:MAP3K6 -inverse_is_a: HGNC:MAP3K7 -inverse_is_a: HGNC:MAP3K8 -inverse_is_a: HGNC:MAP3K9 -inverse_is_a: HGNC:MAP3K10 -inverse_is_a: HGNC:MAP3K11 -inverse_is_a: HGNC:MAP3K12 -inverse_is_a: HGNC:MAP3K13 -inverse_is_a: HGNC:MAP3K14 -inverse_is_a: HGNC:MAP3K15 -inverse_is_a: FPLX:TAOK -inverse_is_a: HGNC:MAP3K19 -inverse_is_a: HGNC:MAP3K20 -inverse_is_a: HGNC:MAP3K21 - -[Term] -id: FPLX:MAPK +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a FPLX:000399 ! RAF +relationship: inverse_is_a HGNC:6848 ! MAP3K1 +relationship: inverse_is_a HGNC:6854 ! MAP3K2 +relationship: inverse_is_a HGNC:6855 ! MAP3K3 +relationship: inverse_is_a HGNC:6856 ! MAP3K4 +relationship: inverse_is_a HGNC:6857 ! MAP3K5 +relationship: inverse_is_a HGNC:6858 ! MAP3K6 +relationship: inverse_is_a HGNC:6859 ! MAP3K7 +relationship: inverse_is_a HGNC:6860 ! MAP3K8 +relationship: inverse_is_a HGNC:6861 ! MAP3K9 +relationship: inverse_is_a HGNC:6849 ! MAP3K10 +relationship: inverse_is_a HGNC:6850 ! MAP3K11 +relationship: inverse_is_a HGNC:6851 ! MAP3K12 +relationship: inverse_is_a HGNC:6852 ! MAP3K13 +relationship: inverse_is_a HGNC:6853 ! MAP3K14 +relationship: inverse_is_a HGNC:31689 ! MAP3K15 +relationship: inverse_is_a FPLX:000458 ! TAOK +relationship: inverse_is_a HGNC:26249 ! MAP3K19 +relationship: inverse_is_a HGNC:17797 ! MAP3K20 +relationship: inverse_is_a HGNC:29798 ! MAP3K21 + +[Term] +id: FPLX:000283 name: MAPK synonym: "MAP kinase" EXACT [] synonym: "MAP kinases" EXACT [] @@ -4709,13 +4729,13 @@ synonym: "mitogen-activated protein kinases" EXACT [] xref: ECCODE:2.7.11.24 xref: ECCODE:2.7.12.2 xref: NCIT:C16376 -is_a: FPLX:root -inverse_is_a: FPLX:ERK -inverse_is_a: FPLX:p38 -inverse_is_a: FPLX:JNK +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a FPLX:000161 ! ERK +relationship: inverse_is_a FPLX:000326 ! p38 +relationship: inverse_is_a FPLX:000267 ! JNK [Term] -id: FPLX:MCM +id: FPLX:000284 name: MCM synonym: "MCM" EXACT [] synonym: "mini-chromosome maintenance complex" EXACT [] @@ -4727,19 +4747,19 @@ xref: IP:IPR031327 xref: MEDSCAN:urn:agi-complex:prophash-e6be10f6a8e79aed1daa4ec2ac191db1 xref: NEXTPROT-FAMILY:02187 xref: XFAM:PF00493 -is_a: FPLX:root -inverse_is_a: HGNC:MCM2 -inverse_is_a: HGNC:MCM3 -inverse_is_a: HGNC:MCM4 -inverse_is_a: HGNC:MCM5 -inverse_is_a: HGNC:MCM6 -inverse_is_a: HGNC:MCM7 -inverse_is_a: HGNC:MCM8 -inverse_is_a: HGNC:MCM9 -inverse_is_a: HGNC:MCMDC2 - -[Term] -id: FPLX:MEF2 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:6944 ! MCM2 +relationship: inverse_is_a HGNC:6945 ! MCM3 +relationship: inverse_is_a HGNC:6947 ! MCM4 +relationship: inverse_is_a HGNC:6948 ! MCM5 +relationship: inverse_is_a HGNC:6949 ! MCM6 +relationship: inverse_is_a HGNC:6950 ! MCM7 +relationship: inverse_is_a HGNC:16147 ! MCM8 +relationship: inverse_is_a HGNC:21484 ! MCM9 +relationship: inverse_is_a HGNC:26368 ! MCMDC2 + +[Term] +id: FPLX:000285 name: MEF2 synonym: "MEF2 family" EXACT [] synonym: "MEF2" EXACT [] @@ -4748,14 +4768,14 @@ xref: IP:IPR033896 xref: MEDSCAN:urn:agi-aopfc:0000143 xref: RE:R-HSA-448866 xref: RE:R-HSA-448868 -is_a: FPLX:root -inverse_is_a: HGNC:MEF2A -inverse_is_a: HGNC:MEF2C -inverse_is_a: HGNC:MEF2D -inverse_is_a: HGNC:MEF2B +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:6993 ! MEF2A +relationship: inverse_is_a HGNC:6996 ! MEF2C +relationship: inverse_is_a HGNC:6997 ! MEF2D +relationship: inverse_is_a HGNC:6995 ! MEF2B [Term] -id: FPLX:MEK +id: FPLX:000286 name: MEK synonym: "MEK 1/2" EXACT [] synonym: "MEK" EXACT [] @@ -4768,27 +4788,27 @@ xref: RE:R-HSA-5672716 xref: RE:R-HSA-5672721 xref: RE:R-HSA-5674489 xref: SIGNOR:SIGNOR-PF25 -is_a: FPLX:MAP2K -inverse_is_a: HGNC:MAP2K1 -inverse_is_a: HGNC:MAP2K2 +is_a: FPLX:000281 ! MAP2K +relationship: inverse_is_a HGNC:6840 ! MAP2K1 +relationship: inverse_is_a HGNC:6842 ! MAP2K2 [Term] -id: FPLX:MGAT +id: FPLX:000287 name: MGAT synonym: "MGAT" EXACT [] -is_a: FPLX:Glycosyltransferase -inverse_is_a: HGNC:MGAT1 -inverse_is_a: HGNC:MGAT2 -inverse_is_a: HGNC:MGAT3 -inverse_is_a: HGNC:MGAT4A -inverse_is_a: HGNC:MGAT4B -inverse_is_a: HGNC:MGAT4C -inverse_is_a: HGNC:MGAT4D -inverse_is_a: HGNC:MGAT5 -inverse_is_a: HGNC:MGAT5B - -[Term] -id: FPLX:Mitochondrial_Ribosome +is_a: FPLX:000198 ! Glycosyltransferase +relationship: inverse_is_a HGNC:7044 ! MGAT1 +relationship: inverse_is_a HGNC:7045 ! MGAT2 +relationship: inverse_is_a HGNC:7046 ! MGAT3 +relationship: inverse_is_a HGNC:7047 ! MGAT4A +relationship: inverse_is_a HGNC:7048 ! MGAT4B +relationship: inverse_is_a HGNC:30871 ! MGAT4C +relationship: inverse_is_a HGNC:43619 ! MGAT4D +relationship: inverse_is_a HGNC:7049 ! MGAT5 +relationship: inverse_is_a HGNC:24140 ! MGAT5B + +[Term] +id: FPLX:000288 name: Mitochondrial-Ribosome synonym: "mammalian mitochondrial ribosome" EXACT [] synonym: "Mitochondrial ribosome" EXACT [] @@ -4804,195 +4824,195 @@ synonym: "55s mitoribosome" EXACT [] synonym: "55S Mitoribosome" EXACT [] synonym: "55s Mitoribosome" EXACT [] xref: GO:0005761 -is_a: FPLX:root -has_part: FPLX:MRPS -has_part: FPLX:MRPL +is_a: FPLX:000000 ! famplex +relationship: has_part FPLX:000289 ! MRPS +relationship: has_part FPLX:000290 ! MRPL [Term] -id: FPLX:MRPS +id: FPLX:000289 name: MRPS synonym: "small mitoribosomal subunit" EXACT [] synonym: "Small Mitoribosomal Subunit" EXACT [] synonym: "small subunit of the mammalian mitochondrial ribosome" EXACT [] synonym: "mitochondrial ribosomal small subunit" EXACT [] xref: GO:0005763 -part_of: FPLX:Mitochondrial_Ribosome -has_part: HGNC:MRPS2 -has_part: HGNC:MRPS5 -has_part: HGNC:MRPS6 -has_part: HGNC:MRPS7 -has_part: HGNC:MRPS9 -has_part: HGNC:MRPS10 -has_part: HGNC:MRPS11 -has_part: HGNC:MRPS12 -has_part: HGNC:MRPS14 -has_part: HGNC:MRPS15 -has_part: HGNC:MRPS16 -has_part: HGNC:MRPS17 -has_part: HGNC:MRPS18A -has_part: HGNC:MRPS18B -has_part: HGNC:MRPS18C -has_part: HGNC:MRPS21 -has_part: HGNC:MRPS22 -has_part: HGNC:MRPS23 -has_part: HGNC:MRPS24 -has_part: HGNC:MRPS25 -has_part: HGNC:MRPS26 -has_part: HGNC:MRPS27 -has_part: HGNC:MRPS28 -has_part: HGNC:DAP3 -has_part: HGNC:MRPS30 -has_part: HGNC:MRPS31 -has_part: HGNC:MRPS33 -has_part: HGNC:MRPS34 -has_part: HGNC:MRPS35 -has_part: HGNC:MRPS36 - -[Term] -id: FPLX:MRPL +relationship: part_of FPLX:000288 ! Mitochondrial_Ribosome +relationship: has_part HGNC:14495 ! MRPS2 +relationship: has_part HGNC:14498 ! MRPS5 +relationship: has_part HGNC:14051 ! MRPS6 +relationship: has_part HGNC:14499 ! MRPS7 +relationship: has_part HGNC:14501 ! MRPS9 +relationship: has_part HGNC:14502 ! MRPS10 +relationship: has_part HGNC:14050 ! MRPS11 +relationship: has_part HGNC:10380 ! MRPS12 +relationship: has_part HGNC:14049 ! MRPS14 +relationship: has_part HGNC:14504 ! MRPS15 +relationship: has_part HGNC:14048 ! MRPS16 +relationship: has_part HGNC:14047 ! MRPS17 +relationship: has_part HGNC:14515 ! MRPS18A +relationship: has_part HGNC:14516 ! MRPS18B +relationship: has_part HGNC:16633 ! MRPS18C +relationship: has_part HGNC:14046 ! MRPS21 +relationship: has_part HGNC:14508 ! MRPS22 +relationship: has_part HGNC:14509 ! MRPS23 +relationship: has_part HGNC:14510 ! MRPS24 +relationship: has_part HGNC:14511 ! MRPS25 +relationship: has_part HGNC:14045 ! MRPS26 +relationship: has_part HGNC:14512 ! MRPS27 +relationship: has_part HGNC:14513 ! MRPS28 +relationship: has_part HGNC:2673 ! DAP3 +relationship: has_part HGNC:8769 ! MRPS30 +relationship: has_part HGNC:16632 ! MRPS31 +relationship: has_part HGNC:16634 ! MRPS33 +relationship: has_part HGNC:16618 ! MRPS34 +relationship: has_part HGNC:16635 ! MRPS35 +relationship: has_part HGNC:16631 ! MRPS36 + +[Term] +id: FPLX:000290 name: MRPL synonym: "large mitoribosomal subunit" EXACT [] synonym: "Large Mitoribosomal Subunit" EXACT [] synonym: "large subunit of the mammalian mitochondrial ribosome" EXACT [] synonym: "mitochondrial ribosomal large subunit" EXACT [] xref: GO:0005762 -part_of: FPLX:Mitochondrial_Ribosome -has_part: HGNC:MRPL1 -has_part: HGNC:MRPL2 -has_part: HGNC:MRPL3 -has_part: HGNC:MRPL4 -has_part: HGNC:MRPL9 -has_part: HGNC:MRPL10 -has_part: HGNC:MRPL11 -has_part: HGNC:MRPL12 -has_part: HGNC:MRPL13 -has_part: HGNC:MRPL14 -has_part: HGNC:MRPL15 -has_part: HGNC:MRPL16 -has_part: HGNC:MRPL17 -has_part: HGNC:MRPL18 -has_part: HGNC:MRPL19 -has_part: HGNC:MRPL20 -has_part: HGNC:MRPL21 -has_part: HGNC:MRPL22 -has_part: HGNC:MRPL23 -has_part: HGNC:MRPL24 -has_part: HGNC:MRPL27 -has_part: HGNC:MRPL28 -has_part: HGNC:MRPL30 -has_part: HGNC:MRPL32 -has_part: HGNC:MRPL33 -has_part: HGNC:MRPL34 -has_part: HGNC:MRPL35 -has_part: HGNC:MRPL36 -has_part: HGNC:MRPL37 -has_part: HGNC:MRPL38 -has_part: HGNC:MRPL39 -has_part: HGNC:MRPL40 -has_part: HGNC:MRPL41 -has_part: HGNC:MRPL42 -has_part: HGNC:MRPL43 -has_part: HGNC:MRPL44 -has_part: HGNC:MRPL45 -has_part: HGNC:MRPL46 -has_part: HGNC:MRPL47 -has_part: HGNC:MRPL48 -has_part: HGNC:MRPL49 -has_part: HGNC:MRPL50 -has_part: HGNC:MRPL51 -has_part: HGNC:MRPL52 -has_part: HGNC:MRPL53 -has_part: HGNC:MRPL54 -has_part: HGNC:MRPL55 -has_part: HGNC:MRPL57 - -[Term] -id: FPLX:MMP +relationship: part_of FPLX:000288 ! Mitochondrial_Ribosome +relationship: has_part HGNC:14275 ! MRPL1 +relationship: has_part HGNC:14056 ! MRPL2 +relationship: has_part HGNC:10379 ! MRPL3 +relationship: has_part HGNC:14276 ! MRPL4 +relationship: has_part HGNC:14277 ! MRPL9 +relationship: has_part HGNC:14055 ! MRPL10 +relationship: has_part HGNC:14042 ! MRPL11 +relationship: has_part HGNC:10378 ! MRPL12 +relationship: has_part HGNC:14278 ! MRPL13 +relationship: has_part HGNC:14279 ! MRPL14 +relationship: has_part HGNC:14054 ! MRPL15 +relationship: has_part HGNC:14476 ! MRPL16 +relationship: has_part HGNC:14053 ! MRPL17 +relationship: has_part HGNC:14477 ! MRPL18 +relationship: has_part HGNC:14052 ! MRPL19 +relationship: has_part HGNC:14478 ! MRPL20 +relationship: has_part HGNC:14479 ! MRPL21 +relationship: has_part HGNC:14480 ! MRPL22 +relationship: has_part HGNC:10322 ! MRPL23 +relationship: has_part HGNC:14037 ! MRPL24 +relationship: has_part HGNC:14483 ! MRPL27 +relationship: has_part HGNC:14484 ! MRPL28 +relationship: has_part HGNC:14036 ! MRPL30 +relationship: has_part HGNC:14035 ! MRPL32 +relationship: has_part HGNC:14487 ! MRPL33 +relationship: has_part HGNC:14488 ! MRPL34 +relationship: has_part HGNC:14489 ! MRPL35 +relationship: has_part HGNC:14490 ! MRPL36 +relationship: has_part HGNC:14034 ! MRPL37 +relationship: has_part HGNC:14033 ! MRPL38 +relationship: has_part HGNC:14027 ! MRPL39 +relationship: has_part HGNC:14491 ! MRPL40 +relationship: has_part HGNC:14492 ! MRPL41 +relationship: has_part HGNC:14493 ! MRPL42 +relationship: has_part HGNC:14517 ! MRPL43 +relationship: has_part HGNC:16650 ! MRPL44 +relationship: has_part HGNC:16651 ! MRPL45 +relationship: has_part HGNC:1192 ! MRPL46 +relationship: has_part HGNC:16652 ! MRPL47 +relationship: has_part HGNC:16653 ! MRPL48 +relationship: has_part HGNC:1176 ! MRPL49 +relationship: has_part HGNC:16654 ! MRPL50 +relationship: has_part HGNC:14044 ! MRPL51 +relationship: has_part HGNC:16655 ! MRPL52 +relationship: has_part HGNC:16684 ! MRPL53 +relationship: has_part HGNC:16685 ! MRPL54 +relationship: has_part HGNC:16686 ! MRPL55 +relationship: has_part HGNC:14514 ! MRPL57 + +[Term] +id: FPLX:000291 name: MMP synonym: "MMP" EXACT [] synonym: "MMPs" EXACT [] xref: BEL:"MMP Family" xref: NCIT:C18164 -is_a: FPLX:root -inverse_is_a: HGNC:MMP1 -inverse_is_a: HGNC:MMP2 -inverse_is_a: HGNC:MMP3 -inverse_is_a: HGNC:MMP7 -inverse_is_a: HGNC:MMP8 -inverse_is_a: HGNC:MMP9 -inverse_is_a: HGNC:MMP10 -inverse_is_a: HGNC:MMP11 -inverse_is_a: HGNC:MMP12 -inverse_is_a: HGNC:MMP13 -inverse_is_a: HGNC:MMP14 -inverse_is_a: HGNC:MMP15 -inverse_is_a: HGNC:MMP16 -inverse_is_a: HGNC:MMP17 -inverse_is_a: HGNC:MMP19 -inverse_is_a: HGNC:MMP20 -inverse_is_a: HGNC:MMP21 -inverse_is_a: HGNC:MMP23B -inverse_is_a: HGNC:MMP24 -inverse_is_a: HGNC:MMP25 -inverse_is_a: HGNC:MMP26 -inverse_is_a: HGNC:MMP27 -inverse_is_a: HGNC:MMP28 - -[Term] -id: FPLX:Metallothionein +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:7155 ! MMP1 +relationship: inverse_is_a HGNC:7166 ! MMP2 +relationship: inverse_is_a HGNC:7173 ! MMP3 +relationship: inverse_is_a HGNC:7174 ! MMP7 +relationship: inverse_is_a HGNC:7175 ! MMP8 +relationship: inverse_is_a HGNC:7176 ! MMP9 +relationship: inverse_is_a HGNC:7156 ! MMP10 +relationship: inverse_is_a HGNC:7157 ! MMP11 +relationship: inverse_is_a HGNC:7158 ! MMP12 +relationship: inverse_is_a HGNC:7159 ! MMP13 +relationship: inverse_is_a HGNC:7160 ! MMP14 +relationship: inverse_is_a HGNC:7161 ! MMP15 +relationship: inverse_is_a HGNC:7162 ! MMP16 +relationship: inverse_is_a HGNC:7163 ! MMP17 +relationship: inverse_is_a HGNC:7165 ! MMP19 +relationship: inverse_is_a HGNC:7167 ! MMP20 +relationship: inverse_is_a HGNC:14357 ! MMP21 +relationship: inverse_is_a HGNC:7171 ! MMP23B +relationship: inverse_is_a HGNC:7172 ! MMP24 +relationship: inverse_is_a HGNC:14246 ! MMP25 +relationship: inverse_is_a HGNC:14249 ! MMP26 +relationship: inverse_is_a HGNC:14250 ! MMP27 +relationship: inverse_is_a HGNC:14366 ! MMP28 + +[Term] +id: FPLX:000292 name: Metallothionein synonym: "Metallothionein" EXACT [] synonym: "metallothionein" EXACT [] synonym: "MT" EXACT [] -is_a: FPLX:root -inverse_is_a: HGNC:MT1A -inverse_is_a: HGNC:MT1B -inverse_is_a: HGNC:MT1CP -inverse_is_a: HGNC:MT1DP -inverse_is_a: HGNC:MT1E -inverse_is_a: HGNC:MT1F -inverse_is_a: HGNC:MT1G -inverse_is_a: HGNC:MT1H -inverse_is_a: HGNC:MT1HL1 -inverse_is_a: HGNC:MT1IP -inverse_is_a: HGNC:MT1JP -inverse_is_a: HGNC:MT1L -inverse_is_a: HGNC:MT1M -inverse_is_a: HGNC:MT1P1 -inverse_is_a: HGNC:MT1P3 -inverse_is_a: HGNC:MT1X -inverse_is_a: HGNC:MT2A -inverse_is_a: HGNC:MT3 -inverse_is_a: HGNC:MT4 - -[Term] -id: FPLX:mTORC1 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:7393 ! MT1A +relationship: inverse_is_a HGNC:7394 ! MT1B +relationship: inverse_is_a HGNC:7395 ! MT1CP +relationship: inverse_is_a HGNC:7396 ! MT1DP +relationship: inverse_is_a HGNC:7397 ! MT1E +relationship: inverse_is_a HGNC:7398 ! MT1F +relationship: inverse_is_a HGNC:7399 ! MT1G +relationship: inverse_is_a HGNC:7400 ! MT1H +relationship: inverse_is_a HGNC:31864 ! MT1HL1 +relationship: inverse_is_a HGNC:7401 ! MT1IP +relationship: inverse_is_a HGNC:7402 ! MT1JP +relationship: inverse_is_a HGNC:7404 ! MT1L +relationship: inverse_is_a HGNC:14296 ! MT1M +relationship: inverse_is_a HGNC:23681 ! MT1P1 +relationship: inverse_is_a HGNC:16120 ! MT1P3 +relationship: inverse_is_a HGNC:7405 ! MT1X +relationship: inverse_is_a HGNC:7406 ! MT2A +relationship: inverse_is_a HGNC:7408 ! MT3 +relationship: inverse_is_a HGNC:18705 ! MT4 + +[Term] +id: FPLX:000293 name: mTORC1 synonym: "mTORC1" EXACT [] synonym: "TORC1" EXACT [] xref: GO:0031931 xref: MEDSCAN:urn:agi-complex:prophash-f472fef3f59301aee0b776702a30f03e xref: NCIT:C96314 -is_a: FPLX:root -has_part: HGNC:MTOR -has_part: HGNC:RPTOR +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:3942 ! MTOR +relationship: has_part HGNC:30287 ! RPTOR [Term] -id: FPLX:mTORC2 +id: FPLX:000294 name: mTORC2 synonym: "mTORC2" EXACT [] synonym: "TORC2" EXACT [] xref: BEL:"TORC2 Complex" xref: MEDSCAN:urn:agi-complex:prophash-0d528c29d63997f87f62e4fbd9f0b168 xref: NCIT:C96315 -is_a: FPLX:root -has_part: HGNC:MAPKAP1 -has_part: HGNC:MTOR -has_part: HGNC:RICTOR -has_part: HGNC:MLST8 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:18752 ! MAPKAP1 +relationship: has_part HGNC:3942 ! MTOR +relationship: has_part HGNC:28611 ! RICTOR +relationship: has_part HGNC:24825 ! MLST8 [Term] -id: FPLX:MYH +id: FPLX:000295 name: MYH synonym: "myosin heavy chain genes" EXACT [] synonym: "myosin heavy chain isoforms" EXACT [] @@ -5003,25 +5023,25 @@ synonym: "Myosin heavy chains" EXACT [] synonym: "myosin heavy chains" EXACT [] xref: BEL:"MYH Family" xref: MEDSCAN:urn:agi-protfc:myosin%20heavy%20chain -is_a: FPLX:root -inverse_is_a: HGNC:MYH1 -inverse_is_a: HGNC:MYH10 -inverse_is_a: HGNC:MYH11 -inverse_is_a: HGNC:MYH13 -inverse_is_a: HGNC:MYH14 -inverse_is_a: HGNC:MYH15 -inverse_is_a: HGNC:MYH2 -inverse_is_a: HGNC:MYH3 -inverse_is_a: HGNC:MYH4 -inverse_is_a: HGNC:MYH6 -inverse_is_a: HGNC:MYH7 -inverse_is_a: HGNC:MYH7B -inverse_is_a: HGNC:MYH8 -inverse_is_a: HGNC:MYH9 -inverse_is_a: HGNC:MYO5A - -[Term] -id: FPLX:MYL +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:7567 ! MYH1 +relationship: inverse_is_a HGNC:7568 ! MYH10 +relationship: inverse_is_a HGNC:7569 ! MYH11 +relationship: inverse_is_a HGNC:7571 ! MYH13 +relationship: inverse_is_a HGNC:23212 ! MYH14 +relationship: inverse_is_a HGNC:31073 ! MYH15 +relationship: inverse_is_a HGNC:7572 ! MYH2 +relationship: inverse_is_a HGNC:7573 ! MYH3 +relationship: inverse_is_a HGNC:7574 ! MYH4 +relationship: inverse_is_a HGNC:7576 ! MYH6 +relationship: inverse_is_a HGNC:7577 ! MYH7 +relationship: inverse_is_a HGNC:15906 ! MYH7B +relationship: inverse_is_a HGNC:7578 ! MYH8 +relationship: inverse_is_a HGNC:7579 ! MYH9 +relationship: inverse_is_a HGNC:7602 ! MYO5A + +[Term] +id: FPLX:000296 name: MYL synonym: "MLC" EXACT [] synonym: "myosin light chain protein" EXACT [] @@ -5029,107 +5049,107 @@ synonym: "myosin light chain" EXACT [] synonym: "myosin light chains" EXACT [] xref: BEL:"MYL Family" xref: MEDSCAN:urn:agi-protfc:myosin%20light%20chain -is_a: FPLX:root -inverse_is_a: FPLX:MYL_alkali -inverse_is_a: FPLX:MYL_regulatory -inverse_is_a: FPLX:MYL_slow +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a FPLX:000297 ! MYL_alkali +relationship: inverse_is_a FPLX:000298 ! MYL_regulatory +relationship: inverse_is_a FPLX:000299 ! MYL_slow [Term] -id: FPLX:MYL_alkali +id: FPLX:000297 name: MYL-alkali synonym: "alkali myosin light chains" EXACT [] synonym: "AMLC" EXACT [] synonym: "myosin alkali light chain proteins" EXACT [] synonym: "myosin alkali light chain" EXACT [] xref: BEL:"MYL Alkali Family" -is_a: FPLX:MYL -inverse_is_a: HGNC:MYL1 -inverse_is_a: HGNC:MYL3 -inverse_is_a: HGNC:MYL4 -inverse_is_a: HGNC:MYL6 -inverse_is_a: HGNC:MYL6B +is_a: FPLX:000296 ! MYL +relationship: inverse_is_a HGNC:7582 ! MYL1 +relationship: inverse_is_a HGNC:7584 ! MYL3 +relationship: inverse_is_a HGNC:7585 ! MYL4 +relationship: inverse_is_a HGNC:7587 ! MYL6 +relationship: inverse_is_a HGNC:29823 ! MYL6B [Term] -id: FPLX:MYL_regulatory +id: FPLX:000298 name: MYL-regulatory synonym: "regulatory myosin light chain" EXACT [] xref: BEL:"MYL Regulatory Family" -is_a: FPLX:MYL -inverse_is_a: HGNC:MYL10 -inverse_is_a: HGNC:MYL12A -inverse_is_a: HGNC:MYL12B -inverse_is_a: HGNC:MYL2 -inverse_is_a: HGNC:MYL5 -inverse_is_a: HGNC:MYL7 -inverse_is_a: HGNC:MYL9 -inverse_is_a: HGNC:MYLPF - -[Term] -id: FPLX:MYL_slow +is_a: FPLX:000296 ! MYL +relationship: inverse_is_a HGNC:29825 ! MYL10 +relationship: inverse_is_a HGNC:16701 ! MYL12A +relationship: inverse_is_a HGNC:29827 ! MYL12B +relationship: inverse_is_a HGNC:7583 ! MYL2 +relationship: inverse_is_a HGNC:7586 ! MYL5 +relationship: inverse_is_a HGNC:21719 ! MYL7 +relationship: inverse_is_a HGNC:15754 ! MYL9 +relationship: inverse_is_a HGNC:29824 ! MYLPF + +[Term] +id: FPLX:000299 name: MYL-slow synonym: "slow myosin" EXACT [] xref: BEL:"MYL Slow Family" -is_a: FPLX:MYL -inverse_is_a: HGNC:MYL2 -inverse_is_a: HGNC:MYL3 -inverse_is_a: HGNC:MYL6B +is_a: FPLX:000296 ! MYL +relationship: inverse_is_a HGNC:7583 ! MYL2 +relationship: inverse_is_a HGNC:7584 ! MYL3 +relationship: inverse_is_a HGNC:29823 ! MYL6B [Term] -id: FPLX:MYST +id: FPLX:000300 name: MYST synonym: "MYST family" EXACT [] synonym: "MYST histone acetylase" EXACT [] synonym: "MYST proteins" EXACT [] xref: BEL:"MYST Family" xref: IP:IPR002717 -is_a: FPLX:root -inverse_is_a: HGNC:KAT8 -inverse_is_a: HGNC:KAT7 -inverse_is_a: HGNC:KAT6A -inverse_is_a: HGNC:KAT6B -inverse_is_a: HGNC:KAT5 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:17933 ! KAT8 +relationship: inverse_is_a HGNC:17016 ! KAT7 +relationship: inverse_is_a HGNC:13013 ! KAT6A +relationship: inverse_is_a HGNC:17582 ! KAT6B +relationship: inverse_is_a HGNC:5275 ! KAT5 [Term] -id: FPLX:NADH_dehydrogenase +id: FPLX:000301 name: NADH-dehydrogenase synonym: "NADH dehydrogenase (ubiquinone)" EXACT [] synonym: "NADH dehydrogenase" EXACT [] xref: BEL:"NADH Dehydrogenase Complex" xref: ECCODE:1.6.5.3 xref: XFAM:PF00146 -is_a: FPLX:root -has_part: HGNC:MT-ND1 -has_part: HGNC:MT-ND2 -has_part: HGNC:MT-ND3 -has_part: HGNC:MT-ND4 -has_part: HGNC:MT-ND4L -has_part: HGNC:MT-ND5 -has_part: HGNC:MT-ND6 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:7455 ! MT-ND1 +relationship: has_part HGNC:7456 ! MT-ND2 +relationship: has_part HGNC:7458 ! MT-ND3 +relationship: has_part HGNC:7459 ! MT-ND4 +relationship: has_part HGNC:7460 ! MT-ND4L +relationship: has_part HGNC:7461 ! MT-ND5 +relationship: has_part HGNC:7462 ! MT-ND6 [Term] -id: FPLX:NADPH_oxidase +id: FPLX:000302 name: NADPH-oxidase synonym: "NAD(P)H oxidase" EXACT [] synonym: "NAD(P)H-oxidase" EXACT [] synonym: "NADPH oxidase" EXACT [] xref: BEL:"NADPH Oxidase Complex" xref: MEDSCAN:urn:agi-aopfc:0000479 -is_a: FPLX:root -has_part: HGNC:CYBA -has_part: HGNC:CYBB -has_part: HGNC:DUOX1 -has_part: HGNC:DUOX2 -has_part: HGNC:NCF1 -has_part: HGNC:NCF2 -has_part: HGNC:NCF4 -has_part: HGNC:NOX1 -has_part: HGNC:NOX3 -has_part: HGNC:NOX4 -has_part: HGNC:NOX5 -has_part: HGNC:RAC1 - -[Term] -id: FPLX:Na_K_ATPase +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:2577 ! CYBA +relationship: has_part HGNC:2578 ! CYBB +relationship: has_part HGNC:3062 ! DUOX1 +relationship: has_part HGNC:13273 ! DUOX2 +relationship: has_part HGNC:7660 ! NCF1 +relationship: has_part HGNC:7661 ! NCF2 +relationship: has_part HGNC:7662 ! NCF4 +relationship: has_part HGNC:7889 ! NOX1 +relationship: has_part HGNC:7890 ! NOX3 +relationship: has_part HGNC:7891 ! NOX4 +relationship: has_part HGNC:14874 ! NOX5 +relationship: has_part HGNC:9801 ! RAC1 + +[Term] +id: FPLX:000303 name: Na-K-ATPase synonym: "Na(+),K(+)-ATPase" EXACT [] synonym: "Na,K-ATPase" EXACT [] @@ -5138,12 +5158,12 @@ synonym: "Na+/K+ATPase" EXACT [] synonym: "Na/K-ATPase" EXACT [] xref: BEL:"Na/K Exchanging ATPase Complex" xref: ECCODE:3.6.3.9 -is_a: FPLX:root -has_part: FPLX:ATP1A -has_part: FPLX:ATP1B +is_a: FPLX:000000 ! famplex +relationship: has_part FPLX:000057 ! ATP1A +relationship: has_part FPLX:000058 ! ATP1B [Term] -id: FPLX:Natriuretic_peptide +id: FPLX:000304 name: Natriuretic-peptide synonym: "Natriuretic Peptide" EXACT [] synonym: "Natriuretic peptide" EXACT [] @@ -5151,13 +5171,13 @@ synonym: "natriuretic peptide" EXACT [] synonym: "Natriuretic Peptides" EXACT [] synonym: "Natriuretic peptides" EXACT [] synonym: "natriuretic peptides" EXACT [] -is_a: FPLX:root -inverse_is_a: HGNC:NPPA -inverse_is_a: HGNC:NPPB -inverse_is_a: HGNC:NPPC +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:7939 ! NPPA +relationship: inverse_is_a HGNC:7940 ! NPPB +relationship: inverse_is_a HGNC:7941 ! NPPC [Term] -id: FPLX:NCOA +id: FPLX:000305 name: NCOA synonym: "p160/SRC" EXACT [] xref: BEL:"p160/SRC Family" @@ -5165,13 +5185,13 @@ xref: IP:IPR010011 xref: IP:IPR014920 xref: IP:IPR014935 xref: IP:IPR017426 -is_a: FPLX:root -inverse_is_a: HGNC:NCOA1 -inverse_is_a: HGNC:NCOA2 -inverse_is_a: HGNC:NCOA3 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:7668 ! NCOA1 +relationship: inverse_is_a HGNC:7669 ! NCOA2 +relationship: inverse_is_a HGNC:7670 ! NCOA3 [Term] -id: FPLX:NCOR +id: FPLX:000306 name: NCOR synonym: "Nuclear Receptor Co-Repressor" EXACT [] synonym: "nuclear receptor co-repressor" EXACT [] @@ -5179,12 +5199,12 @@ synonym: "Nuclear receptor corepressor" EXACT [] synonym: "nuclear receptor corepressor" EXACT [] xref: BEL:"NCOR Family" xref: RE:R-HSA-349716 -is_a: FPLX:root -inverse_is_a: HGNC:NCOR1 -inverse_is_a: HGNC:NCOR2 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:7672 ! NCOR1 +relationship: inverse_is_a HGNC:7673 ! NCOR2 [Term] -id: FPLX:NDRG +id: FPLX:000307 name: NDRG synonym: "N-myc downstream regulated gene family" EXACT [] synonym: "NDR family" EXACT [] @@ -5192,52 +5212,52 @@ synonym: "NDR-family" EXACT [] xref: BEL:"NDRG Family" xref: IP:IPR004142 xref: XFAM:PF03096 -is_a: FPLX:root -inverse_is_a: HGNC:NDRG1 -inverse_is_a: HGNC:NDRG2 -inverse_is_a: HGNC:NDRG3 -inverse_is_a: HGNC:NDRG4 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:7679 ! NDRG1 +relationship: inverse_is_a HGNC:14460 ! NDRG2 +relationship: inverse_is_a HGNC:14462 ! NDRG3 +relationship: inverse_is_a HGNC:14466 ! NDRG4 [Term] -id: FPLX:Neurexins +id: FPLX:000308 name: Neurexins synonym: "Neurexins" EXACT [] synonym: "NRXN" EXACT [] xref: GFAM:1582 -is_a: FPLX:root -inverse_is_a: HGNC:NRXN1 -inverse_is_a: HGNC:NRXN2 -inverse_is_a: HGNC:NRXN3 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:8008 ! NRXN1 +relationship: inverse_is_a HGNC:8009 ! NRXN2 +relationship: inverse_is_a HGNC:8010 ! NRXN3 [Term] -id: FPLX:NFAT +id: FPLX:000309 name: NFAT synonym: "NFAT" EXACT [] xref: BEL:"NFAT Family" xref: IP:IPR008366 xref: NCIT:C17903 -is_a: FPLX:root -inverse_is_a: HGNC:NFATC1 -inverse_is_a: HGNC:NFATC2 -inverse_is_a: HGNC:NFATC3 -inverse_is_a: HGNC:NFATC4 -inverse_is_a: HGNC:NFAT5 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:7775 ! NFATC1 +relationship: inverse_is_a HGNC:7776 ! NFATC2 +relationship: inverse_is_a HGNC:7777 ! NFATC3 +relationship: inverse_is_a HGNC:7778 ! NFATC4 +relationship: inverse_is_a HGNC:7774 ! NFAT5 [Term] -id: FPLX:NFE +id: FPLX:000310 name: NFE synonym: "NF-E2" EXACT [] synonym: "NF-E2-related factor" EXACT [] synonym: "Nuclear factor erythroid 2-related factor" EXACT [] xref: MEDSCAN:urn:agi-aopfc:0000150 xref: MEDSCAN:urn:agi-complex:NF-E2 -is_a: FPLX:root -inverse_is_a: HGNC:NFE2L1 -inverse_is_a: HGNC:NFE2L2 -inverse_is_a: HGNC:NFE2L3 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:7781 ! NFE2L1 +relationship: inverse_is_a HGNC:7782 ! NFE2L2 +relationship: inverse_is_a HGNC:7783 ! NFE2L3 [Term] -id: FPLX:NFkappaB +id: FPLX:000311 name: NFkappaB synonym: "NF-kappaB complexes" EXACT [] synonym: "NF-kappaB dimers" EXACT [] @@ -5272,12 +5292,12 @@ xref: MEDSCAN:urn:agi-aopfc:0000156 xref: MEDSCAN:urn:agi-complex:prophash-8cfce9bfac3857e6f068d517deadfeaa xref: NCIT:C17380 xref: SIGNOR:SIGNOR-PF12 -is_a: FPLX:root -has_part: FPLX:NFkappaB_1 -has_part: FPLX:NFkappaB_2 +is_a: FPLX:000000 ! famplex +relationship: has_part FPLX:000312 ! NFkappaB_1 +relationship: has_part FPLX:000313 ! NFkappaB_2 [Term] -id: FPLX:NFkappaB_1 +id: FPLX:000312 name: NFkappaB-1 synonym: "Class 1 NF-kappaBs" EXACT [] synonym: "class 1 NF-kappaBs" EXACT [] @@ -5297,12 +5317,12 @@ synonym: "NF-κB Class I" EXACT [] synonym: "NF-κB class I" EXACT [] xref: RE:R-HSA-177656 xref: RE:R-HSA-177662 -part_of: FPLX:NFkappaB -inverse_is_a: HGNC:NFKB1 -inverse_is_a: HGNC:NFKB2 +relationship: part_of FPLX:000311 ! NFkappaB +relationship: inverse_is_a HGNC:7794 ! NFKB1 +relationship: inverse_is_a HGNC:7795 ! NFKB2 [Term] -id: FPLX:NFkappaB_2 +id: FPLX:000313 name: NFkappaB-2 synonym: "Class 2 NF-kappaBs" EXACT [] synonym: "class 2 NF-kappaBs" EXACT [] @@ -5320,13 +5340,13 @@ synonym: "NF-κB Class 2" EXACT [] synonym: "NF-κB class 2" EXACT [] synonym: "NF-κB Class II" EXACT [] synonym: "NF-κB class II" EXACT [] -part_of: FPLX:NFkappaB -inverse_is_a: HGNC:RELA -inverse_is_a: HGNC:RELB -inverse_is_a: HGNC:REL +relationship: part_of FPLX:000311 ! NFkappaB +relationship: inverse_is_a HGNC:9955 ! RELA +relationship: inverse_is_a HGNC:9956 ! RELB +relationship: inverse_is_a HGNC:9954 ! REL [Term] -id: FPLX:NFY +id: FPLX:000314 name: NFY synonym: "NF-Y" EXACT [] synonym: "NFY" EXACT [] @@ -5335,22 +5355,22 @@ synonym: "nuclear factor-Y" EXACT [] xref: BEL:"Nfy Complex" xref: RE:R-HSA-2426131 xref: RE:R-HSA-381204 -is_a: FPLX:root -has_part: HGNC:NFYA -has_part: HGNC:NFYB -has_part: HGNC:NFYC +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:7804 ! NFYA +relationship: has_part HGNC:7805 ! NFYB +relationship: has_part HGNC:7806 ! NFYC [Term] -id: FPLX:NKD +id: FPLX:000315 name: NKD synonym: "naked cuticle" EXACT [] xref: BEL:"NKD Family" -is_a: FPLX:root -inverse_is_a: HGNC:NKD1 -inverse_is_a: HGNC:NKD2 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:17045 ! NKD1 +relationship: inverse_is_a HGNC:17046 ! NKD2 [Term] -id: FPLX:NOS +id: FPLX:000316 name: NOS synonym: "NOS" EXACT [] xref: BEL:"NOS Family" @@ -5359,13 +5379,13 @@ xref: IP:IPR012144 xref: MEDSCAN:urn:agi-aopfc:0000494 xref: NEXTPROT-FAMILY:02504 xref: RE:R-HSA-419294 -is_a: FPLX:root -inverse_is_a: HGNC:NOS1 -inverse_is_a: HGNC:NOS2 -inverse_is_a: HGNC:NOS3 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:7872 ! NOS1 +relationship: inverse_is_a HGNC:7873 ! NOS2 +relationship: inverse_is_a HGNC:7876 ! NOS3 [Term] -id: FPLX:Notch +id: FPLX:000317 name: Notch synonym: "Notch" EXACT [] xref: BEL:"NOTCH Family" @@ -5382,14 +5402,14 @@ xref: RE:R-HSA-1911547 xref: RE:R-HSA-1911550 xref: RE:R-HSA-212420 xref: SIGNOR:SIGNOR-PF30 -is_a: FPLX:root -inverse_is_a: HGNC:NOTCH1 -inverse_is_a: HGNC:NOTCH2 -inverse_is_a: HGNC:NOTCH3 -inverse_is_a: HGNC:NOTCH4 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:7881 ! NOTCH1 +relationship: inverse_is_a HGNC:7882 ! NOTCH2 +relationship: inverse_is_a HGNC:7883 ! NOTCH3 +relationship: inverse_is_a HGNC:7884 ! NOTCH4 [Term] -id: FPLX:NRG +id: FPLX:000318 name: NRG synonym: "neuregulin family" EXACT [] synonym: "Neuregulin" EXACT [] @@ -5400,12 +5420,12 @@ synonym: "NRGs" EXACT [] xref: MEDSCAN:urn:agi-protfc:neuregulin%20family xref: XFAM:PF02158 xref: RE:R-HSA-1227957 -is_a: FPLX:root -inverse_is_a: FPLX:NRG_1_2 -inverse_is_a: FPLX:NRG_3_4 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a FPLX:000319 ! NRG_1_2 +relationship: inverse_is_a FPLX:000320 ! NRG_3_4 [Term] -id: FPLX:NRG_1_2 +id: FPLX:000319 name: NRG-1-2 synonym: "NRG1-NRG2" EXACT [] synonym: "NRG1/2" EXACT [] @@ -5413,22 +5433,22 @@ xref: BEL:"NRG1/2 Family" xref: RE:R-HSA-1227956 xref: RE:R-HSA-1247495 xref: RE:R-HSA-1248743 -is_a: FPLX:NRG -inverse_is_a: HGNC:NRG1 -inverse_is_a: HGNC:NRG2 +is_a: FPLX:000318 ! NRG +relationship: inverse_is_a HGNC:7997 ! NRG1 +relationship: inverse_is_a HGNC:7998 ! NRG2 [Term] -id: FPLX:NRG_3_4 +id: FPLX:000320 name: NRG-3-4 synonym: "NRG3-NRG4" EXACT [] synonym: "NRG3/4" EXACT [] xref: BEL:"NRG3/4 Family" -is_a: FPLX:NRG -inverse_is_a: HGNC:NRG3 -inverse_is_a: HGNC:NRG4 +is_a: FPLX:000318 ! NRG +relationship: inverse_is_a HGNC:7999 ! NRG3 +relationship: inverse_is_a HGNC:29862 ! NRG4 [Term] -id: FPLX:NTRK +id: FPLX:000321 name: NTRK synonym: "NTRK" EXACT [] synonym: "NTRKs" EXACT [] @@ -5440,22 +5460,22 @@ xref: BEL:"NTRK Family" xref: IP:IPR020777 xref: IP:IPR031635 xref: MEDSCAN:urn:agi-aopfc:0000278 -is_a: FPLX:root -inverse_is_a: HGNC:NTRK1 -inverse_is_a: HGNC:NTRK2 -inverse_is_a: HGNC:NTRK3 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:8031 ! NTRK1 +relationship: inverse_is_a HGNC:8032 ! NTRK2 +relationship: inverse_is_a HGNC:8033 ! NTRK3 [Term] -id: FPLX:OGT_family +id: FPLX:000322 name: OGT-family -is_a: FPLX:Glycosyltransferase -inverse_is_a: HGNC:EOGT -inverse_is_a: HGNC:OGT -inverse_is_a: HGNC:POMGNT1 -inverse_is_a: HGNC:POMGNT2 +is_a: FPLX:000198 ! Glycosyltransferase +relationship: inverse_is_a HGNC:28526 ! EOGT +relationship: inverse_is_a HGNC:8127 ! OGT +relationship: inverse_is_a HGNC:19139 ! POMGNT1 +relationship: inverse_is_a HGNC:25902 ! POMGNT2 [Term] -id: FPLX:p14_3_3 +id: FPLX:000323 name: p14-3-3 synonym: "14-3-3 proteins" EXACT [] synonym: "14-3-3" EXACT [] @@ -5468,17 +5488,17 @@ xref: XFAM:PF00244 xref: RE:R-HSA-1445138 xref: RE:R-HSA-2457842 xref: SIGNOR:SIGNOR-PF7 -is_a: FPLX:root -inverse_is_a: HGNC:SFN -inverse_is_a: HGNC:YWHAB -inverse_is_a: HGNC:YWHAE -inverse_is_a: HGNC:YWHAG -inverse_is_a: HGNC:YWHAH -inverse_is_a: HGNC:YWHAQ -inverse_is_a: HGNC:YWHAZ +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:10773 ! SFN +relationship: inverse_is_a HGNC:12849 ! YWHAB +relationship: inverse_is_a HGNC:12851 ! YWHAE +relationship: inverse_is_a HGNC:12852 ! YWHAG +relationship: inverse_is_a HGNC:12853 ! YWHAH +relationship: inverse_is_a HGNC:12854 ! YWHAQ +relationship: inverse_is_a HGNC:12855 ! YWHAZ [Term] -id: FPLX:P2RX +id: FPLX:000324 name: P2RX synonym: "P2X purinoreceptor" EXACT [] synonym: "P2X purinoreceptors" EXACT [] @@ -5493,37 +5513,37 @@ xref: NEXTPROT-FAMILY:02630 xref: XFAM:PF00864 xref: RE:R-HSA-139848 xref: RE:R-HSA-8861873 -is_a: FPLX:root -inverse_is_a: HGNC:P2RX1 -inverse_is_a: HGNC:P2RX2 -inverse_is_a: HGNC:P2RX3 -inverse_is_a: HGNC:P2RX4 -inverse_is_a: HGNC:P2RX5 -inverse_is_a: HGNC:P2RX6 -inverse_is_a: HGNC:P2RX7 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:8533 ! P2RX1 +relationship: inverse_is_a HGNC:15459 ! P2RX2 +relationship: inverse_is_a HGNC:8534 ! P2RX3 +relationship: inverse_is_a HGNC:8535 ! P2RX4 +relationship: inverse_is_a HGNC:8536 ! P2RX5 +relationship: inverse_is_a HGNC:8538 ! P2RX6 +relationship: inverse_is_a HGNC:8537 ! P2RX7 [Term] -id: FPLX:P2RY +id: FPLX:000325 name: P2RY synonym: "P2Y receptor" EXACT [] xref: BEL:"P2RY Family" xref: MEDSCAN:urn:agi-protfc:p2y%20receptor -is_a: FPLX:root -inverse_is_a: HGNC:P2RY1 -inverse_is_a: HGNC:P2RY2 -inverse_is_a: HGNC:P2RY4 -inverse_is_a: HGNC:P2RY6 -inverse_is_a: HGNC:P2RY8 -inverse_is_a: HGNC:P2RY10 -inverse_is_a: HGNC:P2RY11 -inverse_is_a: HGNC:P2RY12 -inverse_is_a: HGNC:P2RY13 -inverse_is_a: HGNC:P2RY14 -inverse_is_a: HGNC:LPAR4 -inverse_is_a: HGNC:LPAR6 - -[Term] -id: FPLX:p38 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:8539 ! P2RY1 +relationship: inverse_is_a HGNC:8541 ! P2RY2 +relationship: inverse_is_a HGNC:8542 ! P2RY4 +relationship: inverse_is_a HGNC:8543 ! P2RY6 +relationship: inverse_is_a HGNC:15524 ! P2RY8 +relationship: inverse_is_a HGNC:19906 ! P2RY10 +relationship: inverse_is_a HGNC:8540 ! P2RY11 +relationship: inverse_is_a HGNC:18124 ! P2RY12 +relationship: inverse_is_a HGNC:4537 ! P2RY13 +relationship: inverse_is_a HGNC:16442 ! P2RY14 +relationship: inverse_is_a HGNC:4478 ! LPAR4 +relationship: inverse_is_a HGNC:15520 ! LPAR6 + +[Term] +id: FPLX:000326 name: p38 synonym: "MAPK p38" EXACT [] synonym: "P38 MAPK" EXACT [] @@ -5540,14 +5560,14 @@ xref: RE:R-HSA-1250102 xref: RE:R-HSA-171016 xref: RE:R-HSA-189828 xref: SIGNOR:SIGNOR-PF16 -is_a: FPLX:MAPK -inverse_is_a: HGNC:MAPK11 -inverse_is_a: HGNC:MAPK12 -inverse_is_a: HGNC:MAPK13 -inverse_is_a: HGNC:MAPK14 +is_a: FPLX:000283 ! MAPK +relationship: inverse_is_a HGNC:6873 ! MAPK11 +relationship: inverse_is_a HGNC:6874 ! MAPK12 +relationship: inverse_is_a HGNC:6875 ! MAPK13 +relationship: inverse_is_a HGNC:6876 ! MAPK14 [Term] -id: FPLX:p53_family +id: FPLX:000327 name: p53-family synonym: "P53 family" EXACT [] synonym: "p53 Family" EXACT [] @@ -5560,13 +5580,13 @@ xref: NEXTPROT-FAMILY:02632 xref: XFAM:PF00870 xref: RE:R-HSA-6798076 xref: RE:R-HSA-6798078 -is_a: FPLX:root -inverse_is_a: HGNC:TP53 -inverse_is_a: HGNC:TP63 -inverse_is_a: HGNC:TP73 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:11998 ! TP53 +relationship: inverse_is_a HGNC:15979 ! TP63 +relationship: inverse_is_a HGNC:12003 ! TP73 [Term] -id: FPLX:P70S6K +id: FPLX:000328 name: P70S6K synonym: "p70 S6 kinase" EXACT [] synonym: "P70RSK" EXACT [] @@ -5575,12 +5595,12 @@ synonym: "P70S6K" EXACT [] synonym: "S6K" EXACT [] xref: BEL:"RPS6KB Family" xref: MEDSCAN:urn:agi-protfc:p70rsk -is_a: FPLX:RSK -inverse_is_a: HGNC:RPS6KB1 -inverse_is_a: HGNC:RPS6KB2 +is_a: FPLX:000422 ! RSK +relationship: inverse_is_a HGNC:10436 ! RPS6KB1 +relationship: inverse_is_a HGNC:10437 ! RPS6KB2 [Term] -id: FPLX:P90RSK +id: FPLX:000329 name: P90RSK synonym: "p90RSK" EXACT [] synonym: "RPS6KA" EXACT [] @@ -5589,16 +5609,16 @@ xref: IP:IPR016239 xref: MEDSCAN:urn:agi-protfc:p90rsk xref: RE:R-HSA-446849 xref: SIGNOR:SIGNOR-PF26 -is_a: FPLX:RSK -inverse_is_a: HGNC:RPS6KA1 -inverse_is_a: HGNC:RPS6KA2 -inverse_is_a: HGNC:RPS6KA3 -inverse_is_a: HGNC:RPS6KA4 -inverse_is_a: HGNC:RPS6KA5 -inverse_is_a: HGNC:RPS6KA6 +is_a: FPLX:000422 ! RSK +relationship: inverse_is_a HGNC:10430 ! RPS6KA1 +relationship: inverse_is_a HGNC:10431 ! RPS6KA2 +relationship: inverse_is_a HGNC:10432 ! RPS6KA3 +relationship: inverse_is_a HGNC:10433 ! RPS6KA4 +relationship: inverse_is_a HGNC:10434 ! RPS6KA5 +relationship: inverse_is_a HGNC:10435 ! RPS6KA6 [Term] -id: FPLX:PAK +id: FPLX:000330 name: PAK synonym: "PAK" EXACT [] synonym: "Pak" EXACT [] @@ -5607,42 +5627,42 @@ xref: IP:IPR033923 xref: MEDSCAN:urn:agi-aopfc:0000468 xref: RE:R-HSA-428475 xref: SIGNOR:SIGNOR-PF13 -is_a: FPLX:root -inverse_is_a: HGNC:PAK1 -inverse_is_a: HGNC:PAK2 -inverse_is_a: HGNC:PAK3 -inverse_is_a: HGNC:PAK4 -inverse_is_a: HGNC:PAK5 -inverse_is_a: HGNC:PAK6 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:8590 ! PAK1 +relationship: inverse_is_a HGNC:8591 ! PAK2 +relationship: inverse_is_a HGNC:8592 ! PAK3 +relationship: inverse_is_a HGNC:16059 ! PAK4 +relationship: inverse_is_a HGNC:15916 ! PAK5 +relationship: inverse_is_a HGNC:16061 ! PAK6 [Term] -id: FPLX:PARP +id: FPLX:000331 name: PARP synonym: "PARP genes" EXACT [] synonym: "PARPs" EXACT [] synonym: "Poly(ADP-ribose) polymerase" EXACT [] synonym: "Poly(ADP-ribose) polymerases" EXACT [] xref: XFAM:PF00644 -is_a: FPLX:root -inverse_is_a: HGNC:PARP1 -inverse_is_a: HGNC:PARP2 -inverse_is_a: HGNC:PARP3 -inverse_is_a: HGNC:PARP4 -inverse_is_a: HGNC:PARP6 -inverse_is_a: HGNC:PARP8 -inverse_is_a: HGNC:PARP9 -inverse_is_a: HGNC:PARP10 -inverse_is_a: HGNC:PARP11 -inverse_is_a: HGNC:PARP12 -inverse_is_a: HGNC:PARP14 -inverse_is_a: HGNC:PARP15 -inverse_is_a: HGNC:PARP16 -inverse_is_a: HGNC:TNKS -inverse_is_a: HGNC:TNKS2 -inverse_is_a: HGNC:TIPARP - -[Term] -id: FPLX:PARV +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:270 ! PARP1 +relationship: inverse_is_a HGNC:272 ! PARP2 +relationship: inverse_is_a HGNC:273 ! PARP3 +relationship: inverse_is_a HGNC:271 ! PARP4 +relationship: inverse_is_a HGNC:26921 ! PARP6 +relationship: inverse_is_a HGNC:26124 ! PARP8 +relationship: inverse_is_a HGNC:24118 ! PARP9 +relationship: inverse_is_a HGNC:25895 ! PARP10 +relationship: inverse_is_a HGNC:1186 ! PARP11 +relationship: inverse_is_a HGNC:21919 ! PARP12 +relationship: inverse_is_a HGNC:29232 ! PARP14 +relationship: inverse_is_a HGNC:26876 ! PARP15 +relationship: inverse_is_a HGNC:26040 ! PARP16 +relationship: inverse_is_a HGNC:11941 ! TNKS +relationship: inverse_is_a HGNC:15677 ! TNKS2 +relationship: inverse_is_a HGNC:23696 ! TIPARP + +[Term] +id: FPLX:000332 name: PARV synonym: "Parvin" EXACT [] synonym: "parvin" EXACT [] @@ -5651,13 +5671,13 @@ synonym: "parvins" EXACT [] xref: BEL:"PARV Family" xref: IP:IPR028433 xref: NEXTPROT-FAMILY:02660 -is_a: FPLX:root -inverse_is_a: HGNC:PARVA -inverse_is_a: HGNC:PARVB -inverse_is_a: HGNC:PARVG +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:14652 ! PARVA +relationship: inverse_is_a HGNC:14653 ! PARVB +relationship: inverse_is_a HGNC:14654 ! PARVG [Term] -id: FPLX:Patched +id: FPLX:000333 name: Patched synonym: "PATCHED" EXACT [] synonym: "Patched" EXACT [] @@ -5665,12 +5685,12 @@ xref: IP:IPR004766 xref: MEDSCAN:urn:agi-aopfc:0000281 xref: XFAM:PF02460 xref: RE:R-HSA-445134 -is_a: FPLX:root -inverse_is_a: HGNC:PTCH1 -inverse_is_a: HGNC:PTCH2 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:9585 ! PTCH1 +relationship: inverse_is_a HGNC:9586 ! PTCH2 [Term] -id: FPLX:PBX +id: FPLX:000334 name: PBX synonym: "PBX" EXACT [] synonym: "Pbx" EXACT [] @@ -5678,14 +5698,14 @@ synonym: "pbx" EXACT [] synonym: "PBXs" EXACT [] xref: BEL:"PBX Family" xref: IP:IPR005542 -is_a: FPLX:root -inverse_is_a: HGNC:PBX1 -inverse_is_a: HGNC:PBX2 -inverse_is_a: HGNC:PBX3 -inverse_is_a: HGNC:PBX4 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:8632 ! PBX1 +relationship: inverse_is_a HGNC:8633 ! PBX2 +relationship: inverse_is_a HGNC:8634 ! PBX3 +relationship: inverse_is_a HGNC:13403 ! PBX4 [Term] -id: FPLX:PDE +id: FPLX:000335 name: PDE synonym: "PDE" EXACT [] synonym: "PDEs" EXACT [] @@ -5695,20 +5715,20 @@ synonym: "Phosphodiesterases" EXACT [] synonym: "phosphodiesterases" EXACT [] xref: BEL:"PDE Family" xref: ECCODE:3.1.4.- -is_a: FPLX:root -inverse_is_a: HGNC:PDE2A -inverse_is_a: HGNC:PDE9A -inverse_is_a: HGNC:PDE10A -inverse_is_a: HGNC:PDE11A -inverse_is_a: FPLX:PDE1 -inverse_is_a: FPLX:PDE3 -inverse_is_a: FPLX:PDE4 -inverse_is_a: FPLX:PDE6 -inverse_is_a: FPLX:PDE7 -inverse_is_a: FPLX:PDE8 - -[Term] -id: FPLX:PDE1 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:8777 ! PDE2A +relationship: inverse_is_a HGNC:8795 ! PDE9A +relationship: inverse_is_a HGNC:8772 ! PDE10A +relationship: inverse_is_a HGNC:8773 ! PDE11A +relationship: inverse_is_a FPLX:000336 ! PDE1 +relationship: inverse_is_a FPLX:000337 ! PDE3 +relationship: inverse_is_a FPLX:000338 ! PDE4 +relationship: inverse_is_a FPLX:000339 ! PDE6 +relationship: inverse_is_a FPLX:000340 ! PDE7 +relationship: inverse_is_a FPLX:000341 ! PDE8 + +[Term] +id: FPLX:000336 name: PDE1 synonym: "PDE1 family" EXACT [] synonym: "PDE1" EXACT [] @@ -5721,13 +5741,13 @@ xref: GO:0004117 xref: IP:IPR013706 xref: RE:R-HSA-111952 xref: RE:R-HSA-111953 -is_a: FPLX:PDE -inverse_is_a: HGNC:PDE1A -inverse_is_a: HGNC:PDE1B -inverse_is_a: HGNC:PDE1C +is_a: FPLX:000335 ! PDE +relationship: inverse_is_a HGNC:8774 ! PDE1A +relationship: inverse_is_a HGNC:8775 ! PDE1B +relationship: inverse_is_a HGNC:8776 ! PDE1C [Term] -id: FPLX:PDE3 +id: FPLX:000337 name: PDE3 synonym: "PDE 3" EXACT [] synonym: "PDE3 family" EXACT [] @@ -5739,12 +5759,12 @@ synonym: "phosphodiesterase-3" EXACT [] xref: BEL:"PDE3 Family" xref: MEDSCAN:urn:agi-protfc:phosphodiesterase%20III xref: NEXTPROT-FAMILY:00803 -is_a: FPLX:PDE -inverse_is_a: HGNC:PDE3A -inverse_is_a: HGNC:PDE3B +is_a: FPLX:000335 ! PDE +relationship: inverse_is_a HGNC:8778 ! PDE3A +relationship: inverse_is_a HGNC:8779 ! PDE3B [Term] -id: FPLX:PDE4 +id: FPLX:000338 name: PDE4 synonym: "PDE4 family" EXACT [] synonym: "PDE4 isoforms" EXACT [] @@ -5759,14 +5779,14 @@ xref: MEDSCAN:urn:agi-protfc:PDE4%20subfamily xref: NCIT:C107433 xref: NEXTPROT-FAMILY:00804 xref: RE:R-HSA-111960 -is_a: FPLX:PDE -inverse_is_a: HGNC:PDE4A -inverse_is_a: HGNC:PDE4B -inverse_is_a: HGNC:PDE4C -inverse_is_a: HGNC:PDE4D +is_a: FPLX:000335 ! PDE +relationship: inverse_is_a HGNC:8780 ! PDE4A +relationship: inverse_is_a HGNC:8781 ! PDE4B +relationship: inverse_is_a HGNC:8782 ! PDE4C +relationship: inverse_is_a HGNC:8783 ! PDE4D [Term] -id: FPLX:PDE6 +id: FPLX:000339 name: PDE6 synonym: "PDE6 family" EXACT [] synonym: "PDE6" EXACT [] @@ -5776,13 +5796,13 @@ synonym: "Phosphodiesterase-6" EXACT [] synonym: "phosphodiesterase-6" EXACT [] xref: BEL:"PDE6 Family" xref: MEDSCAN:urn:agi-aopfc:0000704 -is_a: FPLX:PDE -inverse_is_a: HGNC:PDE6A -inverse_is_a: HGNC:PDE6B -inverse_is_a: HGNC:PDE6C +is_a: FPLX:000335 ! PDE +relationship: inverse_is_a HGNC:8785 ! PDE6A +relationship: inverse_is_a HGNC:8786 ! PDE6B +relationship: inverse_is_a HGNC:8787 ! PDE6C [Term] -id: FPLX:PDE7 +id: FPLX:000340 name: PDE7 synonym: "PDE7" EXACT [] synonym: "Phosphodiesterase 7" EXACT [] @@ -5790,12 +5810,12 @@ synonym: "phosphodiesterase 7" EXACT [] synonym: "Phosphodiesterase-7" EXACT [] synonym: "phosphodiesterase-7" EXACT [] xref: RE:R-HSA-418540 -is_a: FPLX:PDE -inverse_is_a: HGNC:PDE7A -inverse_is_a: HGNC:PDE7B +is_a: FPLX:000335 ! PDE +relationship: inverse_is_a HGNC:8791 ! PDE7A +relationship: inverse_is_a HGNC:8792 ! PDE7B [Term] -id: FPLX:PDE8 +id: FPLX:000341 name: PDE8 synonym: "PDE8" EXACT [] synonym: "Phosphodiesterase 8" EXACT [] @@ -5803,12 +5823,12 @@ synonym: "phosphodiesterase 8" EXACT [] synonym: "Phosphodiesterase-8" EXACT [] synonym: "phosphodiesterase-8" EXACT [] xref: RE:R-HSA-418541 -is_a: FPLX:PDE -inverse_is_a: HGNC:PDE8A -inverse_is_a: HGNC:PDE8B +is_a: FPLX:000335 ! PDE +relationship: inverse_is_a HGNC:8793 ! PDE8A +relationship: inverse_is_a HGNC:8794 ! PDE8B [Term] -id: FPLX:PDGF +id: FPLX:000342 name: PDGF synonym: "PDGF" EXACT [] xref: BEL:"PDGF Family" @@ -5816,14 +5836,14 @@ xref: GO:0005161 xref: NCIT:C20448 xref: RE:R-HSA-381926 xref: RE:R-HSA-381936 -is_a: FPLX:root -inverse_is_a: HGNC:PDGFA -inverse_is_a: HGNC:PDGFB -inverse_is_a: HGNC:PDGFC -inverse_is_a: HGNC:PDGFD +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:8799 ! PDGFA +relationship: inverse_is_a HGNC:8800 ! PDGFB +relationship: inverse_is_a HGNC:8801 ! PDGFC +relationship: inverse_is_a HGNC:30620 ! PDGFD [Term] -id: FPLX:PDGFR +id: FPLX:000343 name: PDGFR synonym: "PDGFR" EXACT [] xref: BEL:"PDGFR Family" @@ -5834,12 +5854,12 @@ xref: RE:R-HSA-186791 xref: RE:R-HSA-186792 xref: RE:R-HSA-186821 xref: RE:R-HSA-8864040 -is_a: FPLX:root -inverse_is_a: HGNC:PDGFRA -inverse_is_a: HGNC:PDGFRB +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:8803 ! PDGFRA +relationship: inverse_is_a HGNC:8804 ! PDGFRB [Term] -id: FPLX:PDGFR_AA +id: FPLX:000344 name: PDGFR-AA synonym: "PDGFR-AA" EXACT [] synonym: "PDGFR-alphaalpha" EXACT [] @@ -5849,11 +5869,11 @@ synonym: "PDGFRαα" EXACT [] xref: IP:IPR027290 xref: RE:R-HSA-186816 xref: RE:R-HSA-186817 -is_a: FPLX:root -has_part: HGNC:PDGFRA +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:8803 ! PDGFRA [Term] -id: FPLX:PDGFR_AB +id: FPLX:000345 name: PDGFR-AB synonym: "PDGFR-AB" EXACT [] synonym: "PDGFR-alphabeta" EXACT [] @@ -5866,12 +5886,12 @@ xref: RE:R-HSA-186791 xref: RE:R-HSA-186792 xref: RE:R-HSA-186821 xref: RE:R-HSA-8864040 -is_a: FPLX:root -has_part: HGNC:PDGFRA -has_part: HGNC:PDGFRB +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:8803 ! PDGFRA +relationship: has_part HGNC:8804 ! PDGFRB [Term] -id: FPLX:PDGFR_BB +id: FPLX:000346 name: PDGFR-BB synonym: "PDGFR-BB" EXACT [] synonym: "PDGFR-betabeta" EXACT [] @@ -5882,34 +5902,34 @@ xref: IP:IPR027288 xref: RE:R-HSA-186799 xref: RE:R-HSA-186805 xref: RE:R-HSA-8864046 -is_a: FPLX:root -has_part: HGNC:PDGFRB +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:8804 ! PDGFRB [Term] -id: FPLX:PDGF_AA +id: FPLX:000347 name: PDGF-AA synonym: "PDGF-AA" EXACT [] synonym: "PDGF-aa" EXACT [] synonym: "PDGFAA" EXACT [] xref: MEDSCAN:urn:agi-complex:platelet%20derived%20growth%20factor%20AA xref: RE:R-HSA-184203 -is_a: FPLX:root -has_part: HGNC:PDGFA +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:8799 ! PDGFA [Term] -id: FPLX:PDGF_AB +id: FPLX:000348 name: PDGF-AB synonym: "PDGF-AB" EXACT [] synonym: "PDGF-ab" EXACT [] synonym: "PDGFAB" EXACT [] xref: MEDSCAN:urn:agi-complex:platelet%20derived%20growth%20factor%20AB xref: RE:R-HSA-380759 -is_a: FPLX:root -has_part: HGNC:PDGFA -has_part: HGNC:PDGFB +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:8799 ! PDGFA +relationship: has_part HGNC:8800 ! PDGFB [Term] -id: FPLX:PDGF_BB +id: FPLX:000349 name: PDGF-BB synonym: "PDGF-BB" EXACT [] synonym: "PDGF-bb" EXACT [] @@ -5929,45 +5949,45 @@ xref: RE:R-HSA-381935 xref: RE:R-HSA-381938 xref: RE:R-HSA-387074 xref: RE:R-HSA-392712 -is_a: FPLX:root -has_part: HGNC:PDGFB +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:8800 ! PDGFB [Term] -id: FPLX:PDGF_CC +id: FPLX:000350 name: PDGF-CC synonym: "PDGF CC" EXACT [] synonym: "PDGF-CC" EXACT [] synonym: "PDGF-cc" EXACT [] xref: RE:R-HSA-381941 -is_a: FPLX:root -has_part: HGNC:PDGFC +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:8801 ! PDGFC [Term] -id: FPLX:PDGF_DD +id: FPLX:000351 name: PDGF-DD synonym: "PDGF DD" EXACT [] synonym: "PDGF-DD" EXACT [] synonym: "PDGF-dd" EXACT [] xref: RE:R-HSA-381930 -is_a: FPLX:root -has_part: HGNC:PDGFD +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:30620 ! PDGFD [Term] -id: FPLX:PDH +id: FPLX:000352 name: PDH synonym: "PDH" EXACT [] synonym: "pyruvate dehydrogenase (acetyl-transferring)" EXACT [] xref: BEL:"Pyruvate Dehydrogenase Complex" -is_a: FPLX:root -has_part: HGNC:DLAT -has_part: HGNC:DLD -has_part: HGNC:PDHA1 -has_part: HGNC:PDHA2 -has_part: HGNC:PDHB -has_part: HGNC:PDHX +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:2896 ! DLAT +relationship: has_part HGNC:2898 ! DLD +relationship: has_part HGNC:8806 ! PDHA1 +relationship: has_part HGNC:8807 ! PDHA2 +relationship: has_part HGNC:8808 ! PDHB +relationship: has_part HGNC:21350 ! PDHX [Term] -id: FPLX:PDK +id: FPLX:000353 name: PDK synonym: "PDK" EXACT [] synonym: "PDKs" EXACT [] @@ -5976,23 +5996,23 @@ synonym: "pyruvate dehydrogenase kinase" EXACT [] xref: BEL:"PDK Family" xref: ECCODE:1.2.4.1 xref: RE:R-HSA-203947 -is_a: FPLX:root -inverse_is_a: HGNC:PDK1 -inverse_is_a: HGNC:PDK2 -inverse_is_a: HGNC:PDK3 -inverse_is_a: HGNC:PDK4 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:8809 ! PDK1 +relationship: inverse_is_a HGNC:8810 ! PDK2 +relationship: inverse_is_a HGNC:8811 ! PDK3 +relationship: inverse_is_a HGNC:8812 ! PDK4 [Term] -id: FPLX:Pertussis_toxin +id: FPLX:000354 name: Pertussis-toxin synonym: "Pertussis toxin" EXACT [] synonym: "pertussis toxin" EXACT [] synonym: "PTX" EXACT [] xref: NCIT:C736 -is_a: FPLX:root +is_a: FPLX:000000 ! famplex [Term] -id: FPLX:PFN +id: FPLX:000355 name: PFN synonym: "Profilin" EXACT [] synonym: "profilin" EXACT [] @@ -6002,38 +6022,38 @@ xref: BEL:"PFN Family" xref: IP:IPR005455 xref: MEDSCAN:urn:agi-protfc:profilin xref: XFAM:PF00235 -is_a: FPLX:root -inverse_is_a: HGNC:PFN1 -inverse_is_a: HGNC:PFN2 -inverse_is_a: HGNC:PFN3 -inverse_is_a: HGNC:PFN4 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:8881 ! PFN1 +relationship: inverse_is_a HGNC:8882 ! PFN2 +relationship: inverse_is_a HGNC:18627 ! PFN3 +relationship: inverse_is_a HGNC:31103 ! PFN4 [Term] -id: FPLX:PhK +id: FPLX:000356 name: PhK synonym: "PhK" EXACT [] synonym: "Phosphorylase kinase" EXACT [] synonym: "phosphorylase kinase" EXACT [] xref: BEL:"Phosphorylase B Kinase Complex" xref: ECCODE:2.7.11.19 -is_a: FPLX:root -has_part: HGNC:CALM1 -has_part: HGNC:PHKA1 -has_part: HGNC:PHKA2 -has_part: HGNC:PHKB -has_part: HGNC:PHKG1 -has_part: HGNC:PHKG2 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:1442 ! CALM1 +relationship: has_part HGNC:8925 ! PHKA1 +relationship: has_part HGNC:8926 ! PHKA2 +relationship: has_part HGNC:8927 ! PHKB +relationship: has_part HGNC:8930 ! PHKG1 +relationship: has_part HGNC:8931 ! PHKG2 [Term] -id: FPLX:Phosphatase +id: FPLX:000357 name: Phosphatase synonym: "phosphatase" EXACT [] xref: MESH:D010749 xref: NCIT:C16981 -is_a: FPLX:root +is_a: FPLX:000000 ! famplex [Term] -id: FPLX:PI3K +id: FPLX:000358 name: PI3K synonym: "phosphatidylinositol 3-kinase" EXACT [] synonym: "PI 3-kinase" EXACT [] @@ -6045,59 +6065,59 @@ xref: BEL:"p85/p110 PI3Kinase Complex" xref: MEDSCAN:urn:agi-aopfc:0000447 xref: MEDSCAN:urn:agi-complex:prophash-285b9ff3749679e4d6266406a20973aa xref: NCIT:C17270 -is_a: FPLX:root -has_part: FPLX:PI3K_p110 -has_part: FPLX:PIK3R_I +is_a: FPLX:000000 ! famplex +relationship: has_part FPLX:000359 ! PI3K_p110 +relationship: has_part FPLX:000361 ! PIK3R_I [Term] -id: FPLX:PI3K_p110 +id: FPLX:000359 name: PI3K-p110 synonym: "p110" EXACT [] synonym: "PI3K p110 subunit" EXACT [] synonym: "PIK3C" EXACT [] xref: BEL:"PIK3C Class IA Family" xref: IP:IPR003113 -part_of: FPLX:PI3K -inverse_is_a: HGNC:PIK3CA -inverse_is_a: HGNC:PIK3CB -inverse_is_a: HGNC:PIK3CD -inverse_is_a: HGNC:PIK3CG +relationship: part_of FPLX:000358 ! PI3K +relationship: inverse_is_a HGNC:8975 ! PIK3CA +relationship: inverse_is_a HGNC:8976 ! PIK3CB +relationship: inverse_is_a HGNC:8977 ! PIK3CD +relationship: inverse_is_a HGNC:8978 ! PIK3CG [Term] -id: FPLX:PI3K_p85 +id: FPLX:000360 name: PI3K-p85 synonym: "p85" EXACT [] xref: RE:R-HSA-74688 -is_a: FPLX:PIK3R_I -inverse_is_a: HGNC:PIK3R1 -inverse_is_a: HGNC:PIK3R2 +is_a: FPLX:000361 ! PIK3R_I +relationship: inverse_is_a HGNC:8979 ! PIK3R1 +relationship: inverse_is_a HGNC:8980 ! PIK3R2 [Term] -id: FPLX:PIK3R_I +id: FPLX:000361 name: PIK3R-I synonym: "PIK3R" EXACT [] xref: BEL:"PIK3R Class IA Family" -part_of: FPLX:PI3K -inverse_is_a: HGNC:PIK3R3 -inverse_is_a: HGNC:PIK3R4 -inverse_is_a: HGNC:PIK3R5 -inverse_is_a: HGNC:PIK3R6 -inverse_is_a: FPLX:PI3K_p85 +relationship: part_of FPLX:000358 ! PI3K +relationship: inverse_is_a HGNC:8981 ! PIK3R3 +relationship: inverse_is_a HGNC:8982 ! PIK3R4 +relationship: inverse_is_a HGNC:30035 ! PIK3R5 +relationship: inverse_is_a HGNC:27101 ! PIK3R6 +relationship: inverse_is_a FPLX:000360 ! PI3K_p85 [Term] -id: FPLX:PIM +id: FPLX:000362 name: PIM synonym: "PIM" EXACT [] xref: IP:IPR017348 xref: NEXTPROT-FAMILY:03078 xref: SIGNOR:SIGNOR-PF34 -is_a: FPLX:root -inverse_is_a: HGNC:PIM1 -inverse_is_a: HGNC:PIM2 -inverse_is_a: HGNC:PIM3 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:8986 ! PIM1 +relationship: inverse_is_a HGNC:8987 ! PIM2 +relationship: inverse_is_a HGNC:19310 ! PIM3 [Term] -id: FPLX:PKA +id: FPLX:000363 name: PKA synonym: "cAMP-dependent PK" EXACT [] synonym: "cAMP-dependent protein kinase" EXACT [] @@ -6108,12 +6128,12 @@ synonym: "PKA" EXACT [] synonym: "protein kinase A" EXACT [] xref: ECCODE:2.7.11.11 xref: NCIT:C16479 -is_a: FPLX:root -has_part: FPLX:PRKAR -has_part: FPLX:PRKAC +is_a: FPLX:000000 ! famplex +relationship: has_part FPLX:000390 ! PRKAR +relationship: has_part FPLX:000389 ! PRKAC [Term] -id: FPLX:PKC +id: FPLX:000364 name: PKC synonym: "PKC" EXACT [] synonym: "protein kinase C" EXACT [] @@ -6123,32 +6143,32 @@ xref: IP:IPR012233 xref: MESH:D011493 xref: NCIT:C17017 xref: NEXTPROT-FAMILY:03065 -is_a: FPLX:root -inverse_is_a: HGNC:PRKCA -inverse_is_a: HGNC:PRKCB -inverse_is_a: HGNC:PRKCD -inverse_is_a: HGNC:PRKCE -inverse_is_a: HGNC:PRKCG -inverse_is_a: HGNC:PRKCH -inverse_is_a: HGNC:PRKCI -inverse_is_a: HGNC:PRKCQ -inverse_is_a: HGNC:PRKCZ -inverse_is_a: HGNC:PRKD3 - -[Term] -id: FPLX:PKI +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:9393 ! PRKCA +relationship: inverse_is_a HGNC:9395 ! PRKCB +relationship: inverse_is_a HGNC:9399 ! PRKCD +relationship: inverse_is_a HGNC:9401 ! PRKCE +relationship: inverse_is_a HGNC:9402 ! PRKCG +relationship: inverse_is_a HGNC:9403 ! PRKCH +relationship: inverse_is_a HGNC:9404 ! PRKCI +relationship: inverse_is_a HGNC:9410 ! PRKCQ +relationship: inverse_is_a HGNC:9412 ! PRKCZ +relationship: inverse_is_a HGNC:9408 ! PRKD3 + +[Term] +id: FPLX:000365 name: PKI synonym: "PKI" EXACT [] xref: BEL:"PKI Family" xref: IP:IPR004171 xref: XFAM:PF02827 -is_a: FPLX:root -inverse_is_a: HGNC:PKIA -inverse_is_a: HGNC:PKIB -inverse_is_a: HGNC:PKIG +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:9017 ! PKIA +relationship: inverse_is_a HGNC:9018 ! PKIB +relationship: inverse_is_a HGNC:9019 ! PKIG [Term] -id: FPLX:PLA2 +id: FPLX:000366 name: PLA2 synonym: "cPLA2" EXACT [] synonym: "cytosolic phospholipase A(2)" EXACT [] @@ -6161,20 +6181,20 @@ xref: MEDSCAN:urn:agi-aopfc:0000455 xref: MEDSCAN:urn:agi-protfc:cytosolic%20phospholipase%20a2 xref: NCIT:C16979 xref: NEXTPROT-FAMILY:02840 -is_a: FPLX:root -inverse_is_a: HGNC:PLA2G1B -inverse_is_a: HGNC:PLA2G3 -inverse_is_a: HGNC:PLA2G5 -inverse_is_a: HGNC:PLA2G6 -inverse_is_a: HGNC:PLA2G7 -inverse_is_a: HGNC:PLA2G10 -inverse_is_a: HGNC:PLA2G12A -inverse_is_a: HGNC:PLA2G12B -inverse_is_a: FPLX:PLA2G2 -inverse_is_a: FPLX:PLA2G4 - -[Term] -id: FPLX:PLA2G2 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:9030 ! PLA2G1B +relationship: inverse_is_a HGNC:17934 ! PLA2G3 +relationship: inverse_is_a HGNC:9038 ! PLA2G5 +relationship: inverse_is_a HGNC:9039 ! PLA2G6 +relationship: inverse_is_a HGNC:9040 ! PLA2G7 +relationship: inverse_is_a HGNC:9029 ! PLA2G10 +relationship: inverse_is_a HGNC:18554 ! PLA2G12A +relationship: inverse_is_a HGNC:18555 ! PLA2G12B +relationship: inverse_is_a FPLX:000367 ! PLA2G2 +relationship: inverse_is_a FPLX:000368 ! PLA2G4 + +[Term] +id: FPLX:000367 name: PLA2G2 synonym: "GII PLA2" EXACT [] synonym: "GIIPLA2" EXACT [] @@ -6182,15 +6202,15 @@ synonym: "phospholipase A2 group-II" EXACT [] synonym: "PLA2G2" EXACT [] synonym: "PLA2g2" EXACT [] xref: BEL:"PLA2G2 Family" -is_a: FPLX:PLA2 -inverse_is_a: HGNC:PLA2G2A -inverse_is_a: HGNC:PLA2G2C -inverse_is_a: HGNC:PLA2G2D -inverse_is_a: HGNC:PLA2G2E -inverse_is_a: HGNC:PLA2G2F +is_a: FPLX:000366 ! PLA2 +relationship: inverse_is_a HGNC:9031 ! PLA2G2A +relationship: inverse_is_a HGNC:9032 ! PLA2G2C +relationship: inverse_is_a HGNC:9033 ! PLA2G2D +relationship: inverse_is_a HGNC:13414 ! PLA2G2E +relationship: inverse_is_a HGNC:30040 ! PLA2G2F [Term] -id: FPLX:PLA2G4 +id: FPLX:000368 name: PLA2G4 synonym: "gIV-PLA(2)" EXACT [] synonym: "group IV-PLA(2)" EXACT [] @@ -6198,13 +6218,13 @@ synonym: "Phospholipase A2 Group IV" EXACT [] synonym: "phospholipase A2 group-IV" EXACT [] synonym: "PLA2G4" EXACT [] xref: NCIT:C19836 -is_a: FPLX:PLA2 -inverse_is_a: HGNC:PLA2G4A -inverse_is_a: HGNC:PLA2G4C -inverse_is_a: HGNC:PLA2G4D +is_a: FPLX:000366 ! PLA2 +relationship: inverse_is_a HGNC:9035 ! PLA2G4A +relationship: inverse_is_a HGNC:9037 ! PLA2G4C +relationship: inverse_is_a HGNC:30038 ! PLA2G4D [Term] -id: FPLX:PLC +id: FPLX:000369 name: PLC synonym: "Phospholipase C" EXACT [] synonym: "phospholipase C" EXACT [] @@ -6212,15 +6232,15 @@ synonym: "Phospholipase-C" EXACT [] synonym: "phospholipase-C" EXACT [] synonym: "PLC" EXACT [] xref: BEL:"PLC Family" -is_a: FPLX:root -inverse_is_a: HGNC:PLCE1 -inverse_is_a: HGNC:PLCZ1 -inverse_is_a: FPLX:PLCB -inverse_is_a: FPLX:PLCD -inverse_is_a: FPLX:PLCG +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:17175 ! PLCE1 +relationship: inverse_is_a HGNC:19218 ! PLCZ1 +relationship: inverse_is_a FPLX:000370 ! PLCB +relationship: inverse_is_a FPLX:000371 ! PLCD +relationship: inverse_is_a FPLX:000372 ! PLCG [Term] -id: FPLX:PLCB +id: FPLX:000370 name: PLCB synonym: "Phospholipase C-beta" EXACT [] synonym: "phospholipase C-beta" EXACT [] @@ -6233,14 +6253,14 @@ synonym: "phospholipase Cβ" EXACT [] xref: BEL:"PLCB Family" xref: IP:IPR016280 xref: RE:R-HSA-111854 -is_a: FPLX:PLC -inverse_is_a: HGNC:PLCB1 -inverse_is_a: HGNC:PLCB2 -inverse_is_a: HGNC:PLCB3 -inverse_is_a: HGNC:PLCB4 +is_a: FPLX:000369 ! PLC +relationship: inverse_is_a HGNC:15917 ! PLCB1 +relationship: inverse_is_a HGNC:9055 ! PLCB2 +relationship: inverse_is_a HGNC:9056 ! PLCB3 +relationship: inverse_is_a HGNC:9059 ! PLCB4 [Term] -id: FPLX:PLCD +id: FPLX:000371 name: PLCD synonym: "Phospholipase C-delta" EXACT [] synonym: "phospholipase C-delta" EXACT [] @@ -6250,13 +6270,13 @@ synonym: "Phospholipase Cdelta" EXACT [] synonym: "phospholipase Cdelta" EXACT [] synonym: "Phospholipase Cδ" EXACT [] synonym: "phospholipase Cδ" EXACT [] -is_a: FPLX:PLC -inverse_is_a: HGNC:PLCD1 -inverse_is_a: HGNC:PLCD3 -inverse_is_a: HGNC:PLCD4 +is_a: FPLX:000369 ! PLC +relationship: inverse_is_a HGNC:9060 ! PLCD1 +relationship: inverse_is_a HGNC:9061 ! PLCD3 +relationship: inverse_is_a HGNC:9062 ! PLCD4 [Term] -id: FPLX:PLCG +id: FPLX:000372 name: PLCG synonym: "PLC-gamma" EXACT [] synonym: "PLC-γ" EXACT [] @@ -6270,28 +6290,28 @@ xref: RE:R-HSA-1169086 xref: RE:R-HSA-1169089 xref: RE:R-HSA-2029095 xref: RE:R-HSA-2685653 -is_a: FPLX:PLC -inverse_is_a: HGNC:PLCG1 -inverse_is_a: HGNC:PLCG2 +is_a: FPLX:000369 ! PLC +relationship: inverse_is_a HGNC:9065 ! PLCG1 +relationship: inverse_is_a HGNC:9066 ! PLCG2 [Term] -id: FPLX:PLD +id: FPLX:000373 name: PLD synonym: "Phospholipase D" EXACT [] synonym: "phospholipase D" EXACT [] xref: BEL:"PLD Family" xref: ECCODE:3.1.4.4 xref: IP:IPR015679 -is_a: FPLX:root -inverse_is_a: HGNC:PLD1 -inverse_is_a: HGNC:PLD2 -inverse_is_a: HGNC:PLD3 -inverse_is_a: HGNC:PLD4 -inverse_is_a: HGNC:PLD5 -inverse_is_a: HGNC:PLD6 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:9067 ! PLD1 +relationship: inverse_is_a HGNC:9068 ! PLD2 +relationship: inverse_is_a HGNC:17158 ! PLD3 +relationship: inverse_is_a HGNC:23792 ! PLD4 +relationship: inverse_is_a HGNC:26879 ! PLD5 +relationship: inverse_is_a HGNC:30447 ! PLD6 [Term] -id: FPLX:PPAP2 +id: FPLX:000374 name: PPAP2 synonym: "type 2 phosphatidic acid phosphatase" EXACT [] synonym: "type 2 phosphatidic acid phosphatases" EXACT [] @@ -6299,25 +6319,25 @@ synonym: "type II phosphatidic acid phosphatase" EXACT [] synonym: "type II phosphatidic acid phosphatases" EXACT [] xref: BEL:"PPAP2 Family" xref: RE:R-HSA-428110 -is_a: FPLX:root -inverse_is_a: HGNC:PLPP1 -inverse_is_a: HGNC:PLPP2 -inverse_is_a: HGNC:PLPP3 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:9228 ! PLPP1 +relationship: inverse_is_a HGNC:9230 ! PLPP2 +relationship: inverse_is_a HGNC:9229 ! PLPP3 [Term] -id: FPLX:PPAR +id: FPLX:000375 name: PPAR synonym: "PPAR" EXACT [] xref: BEL:"PPAR Family" xref: IP:IPR003074 xref: MEDSCAN:urn:agi-protfc:ppar -is_a: FPLX:root -inverse_is_a: HGNC:PPARA -inverse_is_a: HGNC:PPARD -inverse_is_a: HGNC:PPARG +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:9232 ! PPARA +relationship: inverse_is_a HGNC:9235 ! PPARD +relationship: inverse_is_a HGNC:9236 ! PPARG [Term] -id: FPLX:PPP1 +id: FPLX:000376 name: PPP1 synonym: "PP1 regulator" EXACT [] synonym: "PP1" EXACT [] @@ -6326,12 +6346,12 @@ xref: GO:0008599 xref: MEDSCAN:urn:agi-complex:prophash-d39afef40daf23ad8376b53904c7092c xref: MEDSCAN:urn:agi-complex:protein%20phosphatase%20type%201%20complex xref: NEXTPROT-FAMILY:03001 -is_a: FPLX:root -has_part: FPLX:PPP1C -has_part: FPLX:PPP1R +is_a: FPLX:000000 ! famplex +relationship: has_part FPLX:000377 ! PPP1C +relationship: has_part FPLX:000378 ! PPP1R [Term] -id: FPLX:PPP1C +id: FPLX:000377 name: PPP1C synonym: "PP1C" EXACT [] synonym: "PP1c" EXACT [] @@ -6339,48 +6359,48 @@ synonym: "PPP1C" EXACT [] xref: BEL:"PPP1C Family" xref: IP:IPR031675 xref: RE:R-HSA-163538 -part_of: FPLX:PPP1 -inverse_is_a: HGNC:PPP1CA -inverse_is_a: HGNC:PPP1CB -inverse_is_a: HGNC:PPP1CC +relationship: part_of FPLX:000376 ! PPP1 +relationship: inverse_is_a HGNC:9281 ! PPP1CA +relationship: inverse_is_a HGNC:9282 ! PPP1CB +relationship: inverse_is_a HGNC:9283 ! PPP1CC [Term] -id: FPLX:PPP1R +id: FPLX:000378 name: PPP1R synonym: "PP1R" EXACT [] synonym: "PP1r" EXACT [] xref: BEL:"PPP1R Family" -part_of: FPLX:PPP1 -inverse_is_a: HGNC:PPP1R10 -inverse_is_a: HGNC:PPP1R11 -inverse_is_a: HGNC:PPP1R12A -inverse_is_a: HGNC:PPP1R12B -inverse_is_a: HGNC:PPP1R12C -inverse_is_a: HGNC:PPP1R13B -inverse_is_a: HGNC:PPP1R14A -inverse_is_a: HGNC:PPP1R14B -inverse_is_a: HGNC:PPP1R14C -inverse_is_a: HGNC:PPP1R14D -inverse_is_a: HGNC:PPP1R15A -inverse_is_a: HGNC:PPP1R15B -inverse_is_a: HGNC:PPP1R16A -inverse_is_a: HGNC:PPP1R16B -inverse_is_a: HGNC:PPP1R1A -inverse_is_a: HGNC:PPP1R1B -inverse_is_a: HGNC:PPP1R1C -inverse_is_a: HGNC:PPP1R2 -inverse_is_a: HGNC:PPP1R3A -inverse_is_a: HGNC:PPP1R3B -inverse_is_a: HGNC:PPP1R3C -inverse_is_a: HGNC:PPP1R3D -inverse_is_a: HGNC:PPP1R3F -inverse_is_a: HGNC:PPP1R7 -inverse_is_a: HGNC:PPP1R8 -inverse_is_a: HGNC:PPP1R9A -inverse_is_a: HGNC:PPP1R9B - -[Term] -id: FPLX:PPP2 +relationship: part_of FPLX:000376 ! PPP1 +relationship: inverse_is_a HGNC:9284 ! PPP1R10 +relationship: inverse_is_a HGNC:9285 ! PPP1R11 +relationship: inverse_is_a HGNC:7618 ! PPP1R12A +relationship: inverse_is_a HGNC:7619 ! PPP1R12B +relationship: inverse_is_a HGNC:14947 ! PPP1R12C +relationship: inverse_is_a HGNC:14950 ! PPP1R13B +relationship: inverse_is_a HGNC:14871 ! PPP1R14A +relationship: inverse_is_a HGNC:9057 ! PPP1R14B +relationship: inverse_is_a HGNC:14952 ! PPP1R14C +relationship: inverse_is_a HGNC:14953 ! PPP1R14D +relationship: inverse_is_a HGNC:14375 ! PPP1R15A +relationship: inverse_is_a HGNC:14951 ! PPP1R15B +relationship: inverse_is_a HGNC:14941 ! PPP1R16A +relationship: inverse_is_a HGNC:15850 ! PPP1R16B +relationship: inverse_is_a HGNC:9286 ! PPP1R1A +relationship: inverse_is_a HGNC:9287 ! PPP1R1B +relationship: inverse_is_a HGNC:14940 ! PPP1R1C +relationship: inverse_is_a HGNC:9288 ! PPP1R2 +relationship: inverse_is_a HGNC:9291 ! PPP1R3A +relationship: inverse_is_a HGNC:14942 ! PPP1R3B +relationship: inverse_is_a HGNC:9293 ! PPP1R3C +relationship: inverse_is_a HGNC:9294 ! PPP1R3D +relationship: inverse_is_a HGNC:14944 ! PPP1R3F +relationship: inverse_is_a HGNC:9295 ! PPP1R7 +relationship: inverse_is_a HGNC:9296 ! PPP1R8 +relationship: inverse_is_a HGNC:14946 ! PPP1R9A +relationship: inverse_is_a HGNC:9298 ! PPP1R9B + +[Term] +id: FPLX:000379 name: PPP2 synonym: "PP2 phosphatases" EXACT [] synonym: "PP2" EXACT [] @@ -6389,57 +6409,57 @@ synonym: "protein phosphatase 2" EXACT [] xref: MEDSCAN:urn:agi-complex:prophash-f2e03d3bf1f747adab17ce77b9b5e5b3 xref: MEDSCAN:urn:agi-complex:protein%20phosphatase%20type%202A%20complex xref: RE:R-HSA-196206 -is_a: FPLX:root -has_part: FPLX:PPP2C -has_part: FPLX:PPP2R_A -has_part: FPLX:PPP2R_B +is_a: FPLX:000000 ! famplex +relationship: has_part FPLX:000380 ! PPP2C +relationship: has_part FPLX:000381 ! PPP2R_A +relationship: has_part FPLX:000382 ! PPP2R_B [Term] -id: FPLX:PPP2C +id: FPLX:000380 name: PPP2C synonym: "PP2A catalytic C subunit" EXACT [] synonym: "PP2A-C" EXACT [] synonym: "PP2Ac" EXACT [] xref: BEL:"PPP2C Family" -part_of: FPLX:PPP2 -inverse_is_a: HGNC:PPM1J -inverse_is_a: HGNC:PPP2CA -inverse_is_a: HGNC:PPP2CB +relationship: part_of FPLX:000379 ! PPP2 +relationship: inverse_is_a HGNC:20785 ! PPM1J +relationship: inverse_is_a HGNC:9299 ! PPP2CA +relationship: inverse_is_a HGNC:9300 ! PPP2CB [Term] -id: FPLX:PPP2R_A +id: FPLX:000381 name: PPP2R-A synonym: "PP2A regulatory subunit A" EXACT [] synonym: "regulatory A subunit of PP2A" EXACT [] xref: BEL:"PPP2R Subunit A Family" xref: RE:R-HSA-165990 xref: RE:R-HSA-165997 -part_of: FPLX:PPP2 -inverse_is_a: HGNC:PPP2R1A -inverse_is_a: HGNC:PPP2R1B +relationship: part_of FPLX:000379 ! PPP2 +relationship: inverse_is_a HGNC:9302 ! PPP2R1A +relationship: inverse_is_a HGNC:9303 ! PPP2R1B [Term] -id: FPLX:PPP2R_B +id: FPLX:000382 name: PPP2R-B synonym: "PP2A regulatory subunit B" EXACT [] synonym: "regulatory B subunit of PP2A" EXACT [] xref: BEL:"PPP2R Subunit B Family" -part_of: FPLX:PPP2 -inverse_is_a: HGNC:PPP2R2A -inverse_is_a: HGNC:PPP2R2B -inverse_is_a: HGNC:PPP2R2C -inverse_is_a: HGNC:PPP2R2D -inverse_is_a: HGNC:PPP2R3A -inverse_is_a: HGNC:PPP2R3B -inverse_is_a: HGNC:PTPA -inverse_is_a: HGNC:PPP2R5A -inverse_is_a: HGNC:PPP2R5B -inverse_is_a: HGNC:PPP2R5C -inverse_is_a: HGNC:PPP2R5D -inverse_is_a: HGNC:PPP2R5E - -[Term] -id: FPLX:PPP3 +relationship: part_of FPLX:000379 ! PPP2 +relationship: inverse_is_a HGNC:9304 ! PPP2R2A +relationship: inverse_is_a HGNC:9305 ! PPP2R2B +relationship: inverse_is_a HGNC:9306 ! PPP2R2C +relationship: inverse_is_a HGNC:23732 ! PPP2R2D +relationship: inverse_is_a HGNC:9307 ! PPP2R3A +relationship: inverse_is_a HGNC:13417 ! PPP2R3B +relationship: inverse_is_a HGNC:9308 ! PTPA +relationship: inverse_is_a HGNC:9309 ! PPP2R5A +relationship: inverse_is_a HGNC:9310 ! PPP2R5B +relationship: inverse_is_a HGNC:9311 ! PPP2R5C +relationship: inverse_is_a HGNC:9312 ! PPP2R5D +relationship: inverse_is_a HGNC:9313 ! PPP2R5E + +[Term] +id: FPLX:000383 name: PPP3 synonym: "calcineurin" EXACT [] synonym: "CaN" EXACT [] @@ -6448,12 +6468,12 @@ synonym: "protein phosphatase 2B" EXACT [] xref: BEL:"Calcineurin Complex" xref: BEL:"PPP3 Family" xref: MEDSCAN:urn:agi-complex:protein%20phosphatase%203 -is_a: FPLX:root -has_part: FPLX:PPP3C -has_part: FPLX:PPP3R +is_a: FPLX:000000 ! famplex +relationship: has_part FPLX:000384 ! PPP3C +relationship: has_part FPLX:000385 ! PPP3R [Term] -id: FPLX:PPP3C +id: FPLX:000384 name: PPP3C synonym: "Calcineurin catalytic subunit" EXACT [] synonym: "catalytic subunit of calcineurin" EXACT [] @@ -6462,24 +6482,24 @@ xref: BEL:"PPP3C Family" xref: RE:R-HSA-201779 xref: RE:R-HSA-201798 xref: SIGNOR:SIGNOR-PF18 -part_of: FPLX:PPP3 -inverse_is_a: HGNC:PPP3CA -inverse_is_a: HGNC:PPP3CB -inverse_is_a: HGNC:PPP3CC +relationship: part_of FPLX:000383 ! PPP3 +relationship: inverse_is_a HGNC:9314 ! PPP3CA +relationship: inverse_is_a HGNC:9315 ! PPP3CB +relationship: inverse_is_a HGNC:9316 ! PPP3CC [Term] -id: FPLX:PPP3R +id: FPLX:000385 name: PPP3R synonym: "Calcineurin regulatory subunit" EXACT [] synonym: "regulatory subunit of calcineurin" EXACT [] xref: BEL:"PPP3R Family" xref: NEXTPROT-FAMILY:00421 -part_of: FPLX:PPP3 -inverse_is_a: HGNC:PPP3R1 -inverse_is_a: HGNC:PPP3R2 +relationship: part_of FPLX:000383 ! PPP3 +relationship: inverse_is_a HGNC:9317 ! PPP3R1 +relationship: inverse_is_a HGNC:9318 ! PPP3R2 [Term] -id: FPLX:PRC1_complex +id: FPLX:000386 name: PRC1-complex synonym: "polycomb Repressive Complex (PRC) 1" EXACT [] synonym: "Polycomb Repressive Complex 1" EXACT [] @@ -6493,24 +6513,24 @@ xref: BEL:"PRC1 Maintenance Complex" xref: GO:0035102 xref: MEDSCAN:urn:agi-complex:prophash-aba0c4130764ae7a26054736114e65cd xref: NCIT:C19866 -is_a: FPLX:root -has_part: HGNC:BMI1 -has_part: HGNC:CBX2 -has_part: HGNC:CBX4 -has_part: HGNC:CBX8 -has_part: HGNC:PCGF2 -has_part: HGNC:PHC1 -has_part: HGNC:PHC2 -has_part: HGNC:PHC3 -has_part: HGNC:PHF1 -has_part: HGNC:RING1 -has_part: HGNC:RNF2 -has_part: HGNC:SCMH1 -has_part: HGNC:YY1 -has_part: HGNC:ZNF134 - -[Term] -id: FPLX:PRC2_complex +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:1066 ! BMI1 +relationship: has_part HGNC:1552 ! CBX2 +relationship: has_part HGNC:1554 ! CBX4 +relationship: has_part HGNC:15962 ! CBX8 +relationship: has_part HGNC:12929 ! PCGF2 +relationship: has_part HGNC:3182 ! PHC1 +relationship: has_part HGNC:3183 ! PHC2 +relationship: has_part HGNC:15682 ! PHC3 +relationship: has_part HGNC:8919 ! PHF1 +relationship: has_part HGNC:10018 ! RING1 +relationship: has_part HGNC:10061 ! RNF2 +relationship: has_part HGNC:19003 ! SCMH1 +relationship: has_part HGNC:12856 ! YY1 +relationship: has_part HGNC:12918 ! ZNF134 + +[Term] +id: FPLX:000387 name: PRC2-complex synonym: "Polycomb Repressive Complex 2" EXACT [] synonym: "Polycomb repressive complex 2" EXACT [] @@ -6522,14 +6542,14 @@ synonym: "PRC2" EXACT [] xref: BEL:"PRC2 Initiation Complex" xref: GO:0035098 xref: MEDSCAN:urn:agi-complex:prophash-2b612daa76feb2db86ff39e70449df6b -is_a: FPLX:root -has_part: HGNC:EED -has_part: HGNC:EZH1 -has_part: HGNC:EZH2 -has_part: HGNC:SUZ12 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:3188 ! EED +relationship: has_part HGNC:3526 ! EZH1 +relationship: has_part HGNC:3527 ! EZH2 +relationship: has_part HGNC:17101 ! SUZ12 [Term] -id: FPLX:PRDX +id: FPLX:000388 name: PRDX synonym: "Peroxiredoxin" EXACT [] synonym: "peroxiredoxin" EXACT [] @@ -6537,16 +6557,16 @@ synonym: "Peroxiredoxins" EXACT [] synonym: "peroxiredoxins" EXACT [] xref: BEL:"PRDX Family" xref: ECCODE:1.11.1.15 -is_a: FPLX:root -inverse_is_a: HGNC:PRDX1 -inverse_is_a: HGNC:PRDX2 -inverse_is_a: HGNC:PRDX3 -inverse_is_a: HGNC:PRDX4 -inverse_is_a: HGNC:PRDX5 -inverse_is_a: HGNC:PRDX6 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:9352 ! PRDX1 +relationship: inverse_is_a HGNC:9353 ! PRDX2 +relationship: inverse_is_a HGNC:9354 ! PRDX3 +relationship: inverse_is_a HGNC:17169 ! PRDX4 +relationship: inverse_is_a HGNC:9355 ! PRDX5 +relationship: inverse_is_a HGNC:16753 ! PRDX6 [Term] -id: FPLX:PRKAC +id: FPLX:000389 name: PRKAC synonym: "PKA catalytic subunit" EXACT [] synonym: "PKA catalytic subunits" EXACT [] @@ -6556,13 +6576,13 @@ synonym: "Protein kinase A catalytic subunits" EXACT [] synonym: "protein kinase A catalytic subunits" EXACT [] xref: BEL:"PRKA Family" xref: SIGNOR:SIGNOR-PF17 -part_of: FPLX:PKA -inverse_is_a: HGNC:PRKACA -inverse_is_a: HGNC:PRKACB -inverse_is_a: HGNC:PRKACG +relationship: part_of FPLX:000363 ! PKA +relationship: inverse_is_a HGNC:9380 ! PRKACA +relationship: inverse_is_a HGNC:9381 ! PRKACB +relationship: inverse_is_a HGNC:9382 ! PRKACG [Term] -id: FPLX:PRKAR +id: FPLX:000390 name: PRKAR synonym: "PKA regulatory subunit" EXACT [] synonym: "PKA regulatory subunits" EXACT [] @@ -6577,14 +6597,14 @@ xref: RE:R-HSA-111921 xref: RE:R-HSA-111923 xref: RE:R-HSA-5610566 xref: RE:R-HSA-5610568 -part_of: FPLX:PKA -inverse_is_a: HGNC:PRKAR1A -inverse_is_a: HGNC:PRKAR1B -inverse_is_a: HGNC:PRKAR2A -inverse_is_a: HGNC:PRKAR2B +relationship: part_of FPLX:000363 ! PKA +relationship: inverse_is_a HGNC:9388 ! PRKAR1A +relationship: inverse_is_a HGNC:9390 ! PRKAR1B +relationship: inverse_is_a HGNC:9391 ! PRKAR2A +relationship: inverse_is_a HGNC:9392 ! PRKAR2B [Term] -id: FPLX:PRKG +id: FPLX:000391 name: PRKG synonym: "PKG" EXACT [] synonym: "protein kinase G" EXACT [] @@ -6595,12 +6615,12 @@ xref: IP:IPR035014 xref: RE:R-HSA-418379 xref: RE:R-HSA-4551456 xref: RE:R-HSA-4551462 -is_a: FPLX:root -inverse_is_a: HGNC:PRKG1 -inverse_is_a: HGNC:PRKG2 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:9414 ! PRKG1 +relationship: inverse_is_a HGNC:9416 ! PRKG2 [Term] -id: FPLX:Propionyl_CoA_carboxylase +id: FPLX:000392 name: Propionyl-CoA-carboxylase synonym: "Propionyl-CoA carboxylase" EXACT [] synonym: "propionyl-CoA carboxylase" EXACT [] @@ -6612,19 +6632,19 @@ xref: RE:R-HSA-3323122 xref: RE:R-HSA-3323155 xref: RE:R-HSA-71025 xref: RE:R-HSA-71026 -is_a: FPLX:root -has_part: HGNC:PCCA -has_part: HGNC:PCCB +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:8653 ! PCCA +relationship: has_part HGNC:8654 ! PCCB [Term] -id: FPLX:Protease +id: FPLX:000393 name: Protease synonym: "protease" EXACT [] xref: NCIT:C16965 -is_a: FPLX:root +is_a: FPLX:000000 ! famplex [Term] -id: FPLX:Proteasome +id: FPLX:000394 name: Proteasome synonym: "proteasome endopeptidase" EXACT [] synonym: "proteasome" EXACT [] @@ -6632,78 +6652,78 @@ xref: BEL:"Proteasome Complex" xref: ECCODE:3.4.25.1 xref: GO:0000502 xref: MESH:D046988 -is_a: FPLX:root -has_part: HGNC:PSMA1 -has_part: HGNC:PSMA2 -has_part: HGNC:PSMA3 -has_part: HGNC:PSMA4 -has_part: HGNC:PSMA5 -has_part: HGNC:PSMA6 -has_part: HGNC:PSMA7 -has_part: HGNC:PSMA8 -has_part: HGNC:PSMB1 -has_part: HGNC:PSMB10 -has_part: HGNC:PSMB2 -has_part: HGNC:PSMB3 -has_part: HGNC:PSMB4 -has_part: HGNC:PSMB5 -has_part: HGNC:PSMB6 -has_part: HGNC:PSMB7 -has_part: HGNC:PSMB8 -has_part: HGNC:PSMB9 -has_part: HGNC:PSMC1 -has_part: HGNC:PSMC2 -has_part: HGNC:PSMC3 -has_part: HGNC:PSMC4 -has_part: HGNC:PSMC5 -has_part: HGNC:PSMC6 -has_part: HGNC:PSMD1 -has_part: HGNC:PSMD10 -has_part: HGNC:PSMD11 -has_part: HGNC:PSMD12 -has_part: HGNC:PSMD13 -has_part: HGNC:PSMD14 -has_part: HGNC:PSMD2 -has_part: HGNC:PSMD3 -has_part: HGNC:PSMD4 -has_part: HGNC:PSMD5 -has_part: HGNC:PSMD6 -has_part: HGNC:PSMD7 -has_part: HGNC:PSMD8 -has_part: HGNC:PSMD9 -has_part: HGNC:PSME1 -has_part: HGNC:PSME2 -has_part: HGNC:PSME3 -has_part: HGNC:PSMF1 -has_part: HGNC:SEM1 -has_part: HGNC:USP5 - -[Term] -id: FPLX:PTGER +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:9530 ! PSMA1 +relationship: has_part HGNC:9531 ! PSMA2 +relationship: has_part HGNC:9532 ! PSMA3 +relationship: has_part HGNC:9533 ! PSMA4 +relationship: has_part HGNC:9534 ! PSMA5 +relationship: has_part HGNC:9535 ! PSMA6 +relationship: has_part HGNC:9536 ! PSMA7 +relationship: has_part HGNC:22985 ! PSMA8 +relationship: has_part HGNC:9537 ! PSMB1 +relationship: has_part HGNC:9538 ! PSMB10 +relationship: has_part HGNC:9539 ! PSMB2 +relationship: has_part HGNC:9540 ! PSMB3 +relationship: has_part HGNC:9541 ! PSMB4 +relationship: has_part HGNC:9542 ! PSMB5 +relationship: has_part HGNC:9543 ! PSMB6 +relationship: has_part HGNC:9544 ! PSMB7 +relationship: has_part HGNC:9545 ! PSMB8 +relationship: has_part HGNC:9546 ! PSMB9 +relationship: has_part HGNC:9547 ! PSMC1 +relationship: has_part HGNC:9548 ! PSMC2 +relationship: has_part HGNC:9549 ! PSMC3 +relationship: has_part HGNC:9551 ! PSMC4 +relationship: has_part HGNC:9552 ! PSMC5 +relationship: has_part HGNC:9553 ! PSMC6 +relationship: has_part HGNC:9554 ! PSMD1 +relationship: has_part HGNC:9555 ! PSMD10 +relationship: has_part HGNC:9556 ! PSMD11 +relationship: has_part HGNC:9557 ! PSMD12 +relationship: has_part HGNC:9558 ! PSMD13 +relationship: has_part HGNC:16889 ! PSMD14 +relationship: has_part HGNC:9559 ! PSMD2 +relationship: has_part HGNC:9560 ! PSMD3 +relationship: has_part HGNC:9561 ! PSMD4 +relationship: has_part HGNC:9563 ! PSMD5 +relationship: has_part HGNC:9564 ! PSMD6 +relationship: has_part HGNC:9565 ! PSMD7 +relationship: has_part HGNC:9566 ! PSMD8 +relationship: has_part HGNC:9567 ! PSMD9 +relationship: has_part HGNC:9568 ! PSME1 +relationship: has_part HGNC:9569 ! PSME2 +relationship: has_part HGNC:9570 ! PSME3 +relationship: has_part HGNC:9571 ! PSMF1 +relationship: has_part HGNC:10845 ! SEM1 +relationship: has_part HGNC:12628 ! USP5 + +[Term] +id: FPLX:000395 name: PTGER synonym: "prostaglandin E receptor" EXACT [] xref: BEL:"PTGER Family" -is_a: FPLX:root -inverse_is_a: HGNC:PTGER1 -inverse_is_a: HGNC:PTGER2 -inverse_is_a: HGNC:PTGER3 -inverse_is_a: HGNC:PTGER4 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:9593 ! PTGER1 +relationship: inverse_is_a HGNC:9594 ! PTGER2 +relationship: inverse_is_a HGNC:9595 ! PTGER3 +relationship: inverse_is_a HGNC:9596 ! PTGER4 [Term] -id: FPLX:PYG +id: FPLX:000396 name: PYG synonym: "Glycogen phosphorylase" EXACT [] synonym: "Glycogen phosphorylases" EXACT [] synonym: "glycogen phosphorylase" EXACT [] synonym: "glycogen phosphorylases" EXACT [] synonym: "PYG" EXACT [] -is_a: FPLX:Glycosyltransferase -inverse_is_a: HGNC:PYGB -inverse_is_a: HGNC:PYGL -inverse_is_a: HGNC:PYGM +is_a: FPLX:000198 ! Glycosyltransferase +relationship: inverse_is_a HGNC:9723 ! PYGB +relationship: inverse_is_a HGNC:9725 ! PYGL +relationship: inverse_is_a HGNC:9726 ! PYGM [Term] -id: FPLX:RAB +id: FPLX:000397 name: RAB synonym: "Rab GTPase" EXACT [] synonym: "Rab GTPases" EXACT [] @@ -6716,90 +6736,90 @@ synonym: "Rabs" EXACT [] xref: BEL:"RAB Family" xref: MEDSCAN:urn:agi-protfc:rab xref: NEXTPROT-FAMILY:03661 -is_a: FPLX:root -inverse_is_a: HGNC:RAB10 -inverse_is_a: HGNC:RAB11A -inverse_is_a: HGNC:RAB11B -inverse_is_a: HGNC:RAB12 -inverse_is_a: HGNC:RAB13 -inverse_is_a: HGNC:RAB14 -inverse_is_a: HGNC:RAB15 -inverse_is_a: HGNC:RAB17 -inverse_is_a: HGNC:RAB18 -inverse_is_a: HGNC:RAB19 -inverse_is_a: HGNC:RAB1A -inverse_is_a: HGNC:RAB1B -inverse_is_a: HGNC:RAB1C -inverse_is_a: HGNC:RAB20 -inverse_is_a: HGNC:RAB21 -inverse_is_a: HGNC:RAB22A -inverse_is_a: HGNC:RAB23 -inverse_is_a: HGNC:RAB24 -inverse_is_a: HGNC:RAB25 -inverse_is_a: HGNC:RAB26 -inverse_is_a: HGNC:RAB27A -inverse_is_a: HGNC:RAB27B -inverse_is_a: HGNC:RAB28 -inverse_is_a: HGNC:RAB2A -inverse_is_a: HGNC:RAB2B -inverse_is_a: HGNC:RAB30 -inverse_is_a: HGNC:RAB31 -inverse_is_a: HGNC:RAB32 -inverse_is_a: HGNC:RAB33A -inverse_is_a: HGNC:RAB33B -inverse_is_a: HGNC:RAB34 -inverse_is_a: HGNC:RAB35 -inverse_is_a: HGNC:RAB36 -inverse_is_a: HGNC:RAB37 -inverse_is_a: HGNC:RAB38 -inverse_is_a: HGNC:RAB39A -inverse_is_a: HGNC:RAB39B -inverse_is_a: HGNC:RAB3A -inverse_is_a: HGNC:RAB3B -inverse_is_a: HGNC:RAB3C -inverse_is_a: HGNC:RAB3D -inverse_is_a: HGNC:RAB40A -inverse_is_a: HGNC:RAB40AL -inverse_is_a: HGNC:RAB40B -inverse_is_a: HGNC:RAB40C -inverse_is_a: HGNC:RAB41 -inverse_is_a: HGNC:RAB42 -inverse_is_a: HGNC:RAB43 -inverse_is_a: HGNC:RAB44 -inverse_is_a: HGNC:RAB4A -inverse_is_a: HGNC:RAB4B -inverse_is_a: HGNC:RAB5A -inverse_is_a: HGNC:RAB5B -inverse_is_a: HGNC:RAB5C -inverse_is_a: HGNC:RAB6A -inverse_is_a: HGNC:RAB6B -inverse_is_a: HGNC:RAB6C -inverse_is_a: HGNC:RAB7A -inverse_is_a: HGNC:RAB7B -inverse_is_a: HGNC:RAB29 -inverse_is_a: HGNC:RAB8A -inverse_is_a: HGNC:RAB8B -inverse_is_a: HGNC:RAB9A -inverse_is_a: HGNC:RAB9B -inverse_is_a: HGNC:RABL2A -inverse_is_a: HGNC:RABL2B -inverse_is_a: HGNC:RABL3 -inverse_is_a: HGNC:IFT22 - -[Term] -id: FPLX:RAC +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:9759 ! RAB10 +relationship: inverse_is_a HGNC:9760 ! RAB11A +relationship: inverse_is_a HGNC:9761 ! RAB11B +relationship: inverse_is_a HGNC:31332 ! RAB12 +relationship: inverse_is_a HGNC:9762 ! RAB13 +relationship: inverse_is_a HGNC:16524 ! RAB14 +relationship: inverse_is_a HGNC:20150 ! RAB15 +relationship: inverse_is_a HGNC:16523 ! RAB17 +relationship: inverse_is_a HGNC:14244 ! RAB18 +relationship: inverse_is_a HGNC:19982 ! RAB19 +relationship: inverse_is_a HGNC:9758 ! RAB1A +relationship: inverse_is_a HGNC:18370 ! RAB1B +relationship: inverse_is_a HGNC:23683 ! RAB1C +relationship: inverse_is_a HGNC:18260 ! RAB20 +relationship: inverse_is_a HGNC:18263 ! RAB21 +relationship: inverse_is_a HGNC:9764 ! RAB22A +relationship: inverse_is_a HGNC:14263 ! RAB23 +relationship: inverse_is_a HGNC:9765 ! RAB24 +relationship: inverse_is_a HGNC:18238 ! RAB25 +relationship: inverse_is_a HGNC:14259 ! RAB26 +relationship: inverse_is_a HGNC:9766 ! RAB27A +relationship: inverse_is_a HGNC:9767 ! RAB27B +relationship: inverse_is_a HGNC:9768 ! RAB28 +relationship: inverse_is_a HGNC:9763 ! RAB2A +relationship: inverse_is_a HGNC:20246 ! RAB2B +relationship: inverse_is_a HGNC:9770 ! RAB30 +relationship: inverse_is_a HGNC:9771 ! RAB31 +relationship: inverse_is_a HGNC:9772 ! RAB32 +relationship: inverse_is_a HGNC:9773 ! RAB33A +relationship: inverse_is_a HGNC:16075 ! RAB33B +relationship: inverse_is_a HGNC:16519 ! RAB34 +relationship: inverse_is_a HGNC:9774 ! RAB35 +relationship: inverse_is_a HGNC:9775 ! RAB36 +relationship: inverse_is_a HGNC:30268 ! RAB37 +relationship: inverse_is_a HGNC:9776 ! RAB38 +relationship: inverse_is_a HGNC:16521 ! RAB39A +relationship: inverse_is_a HGNC:16499 ! RAB39B +relationship: inverse_is_a HGNC:9777 ! RAB3A +relationship: inverse_is_a HGNC:9778 ! RAB3B +relationship: inverse_is_a HGNC:30269 ! RAB3C +relationship: inverse_is_a HGNC:9779 ! RAB3D +relationship: inverse_is_a HGNC:18283 ! RAB40A +relationship: inverse_is_a HGNC:25410 ! RAB40AL +relationship: inverse_is_a HGNC:18284 ! RAB40B +relationship: inverse_is_a HGNC:18285 ! RAB40C +relationship: inverse_is_a HGNC:18293 ! RAB41 +relationship: inverse_is_a HGNC:28702 ! RAB42 +relationship: inverse_is_a HGNC:19983 ! RAB43 +relationship: inverse_is_a HGNC:21068 ! RAB44 +relationship: inverse_is_a HGNC:9781 ! RAB4A +relationship: inverse_is_a HGNC:9782 ! RAB4B +relationship: inverse_is_a HGNC:9783 ! RAB5A +relationship: inverse_is_a HGNC:9784 ! RAB5B +relationship: inverse_is_a HGNC:9785 ! RAB5C +relationship: inverse_is_a HGNC:9786 ! RAB6A +relationship: inverse_is_a HGNC:14902 ! RAB6B +relationship: inverse_is_a HGNC:16525 ! RAB6C +relationship: inverse_is_a HGNC:9788 ! RAB7A +relationship: inverse_is_a HGNC:30513 ! RAB7B +relationship: inverse_is_a HGNC:9789 ! RAB29 +relationship: inverse_is_a HGNC:7007 ! RAB8A +relationship: inverse_is_a HGNC:30273 ! RAB8B +relationship: inverse_is_a HGNC:9792 ! RAB9A +relationship: inverse_is_a HGNC:14090 ! RAB9B +relationship: inverse_is_a HGNC:9799 ! RABL2A +relationship: inverse_is_a HGNC:9800 ! RABL2B +relationship: inverse_is_a HGNC:18072 ! RABL3 +relationship: inverse_is_a HGNC:21895 ! IFT22 + +[Term] +id: FPLX:000398 name: RAC synonym: "RAC" EXACT [] xref: BEL:"RAC Family" xref: NEXTPROT-FAMILY:03066 -is_a: FPLX:root -inverse_is_a: HGNC:RAC1 -inverse_is_a: HGNC:RAC2 -inverse_is_a: HGNC:RAC3 -inverse_is_a: HGNC:RHOG +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:9801 ! RAC1 +relationship: inverse_is_a HGNC:9802 ! RAC2 +relationship: inverse_is_a HGNC:9803 ! RAC3 +relationship: inverse_is_a HGNC:672 ! RHOG [Term] -id: FPLX:RAF +id: FPLX:000399 name: RAF synonym: "RAF" EXACT [] synonym: "Raf" EXACT [] @@ -6809,13 +6829,13 @@ xref: RE:R-HSA-5672708 xref: RE:R-HSA-5672726 xref: RE:R-HSA-5674134 xref: RE:R-HSA-5674136 -is_a: FPLX:MAP3K -inverse_is_a: HGNC:ARAF -inverse_is_a: HGNC:BRAF -inverse_is_a: HGNC:RAF1 +is_a: FPLX:000282 ! MAP3K +relationship: inverse_is_a HGNC:646 ! ARAF +relationship: inverse_is_a HGNC:1097 ! BRAF +relationship: inverse_is_a HGNC:9829 ! RAF1 [Term] -id: FPLX:RAL +id: FPLX:000400 name: RAL synonym: "RAL family" EXACT [] synonym: "Ral family" EXACT [] @@ -6827,43 +6847,43 @@ synonym: "RAL" EXACT [] xref: IP:IPR028412 xref: RE:R-HSA-170994 xref: RE:R-HSA-170998 -is_a: FPLX:root -inverse_is_a: HGNC:RALA -inverse_is_a: HGNC:RALB +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:9839 ! RALA +relationship: inverse_is_a HGNC:9840 ! RALB [Term] -id: FPLX:RAP1 +id: FPLX:000401 name: RAP1 synonym: "Rap1" EXACT [] xref: NEXTPROT-FAMILY:04773 -is_a: FPLX:root -inverse_is_a: HGNC:RAP1A -inverse_is_a: HGNC:RAP1B +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:9855 ! RAP1A +relationship: inverse_is_a HGNC:9857 ! RAP1B [Term] -id: FPLX:RAPGEF +id: FPLX:000402 name: RAPGEF synonym: "Rap guanine nucleotide exchange factor" EXACT [] synonym: "Rap guanine nucleotide exchange factors" EXACT [] synonym: "RapGEFs" EXACT [] -is_a: FPLX:root -inverse_is_a: HGNC:RAPGEF1 -inverse_is_a: HGNC:RAPGEF2 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:4568 ! RAPGEF1 +relationship: inverse_is_a HGNC:16854 ! RAPGEF2 [Term] -id: FPLX:RAR +id: FPLX:000403 name: RAR synonym: "RAR" EXACT [] synonym: "retinoic acid receptors" EXACT [] xref: BEL:"RAR Family" xref: NCIT:C17532 -is_a: FPLX:root -inverse_is_a: HGNC:RARA -inverse_is_a: HGNC:RARB -inverse_is_a: HGNC:RARG +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:9864 ! RARA +relationship: inverse_is_a HGNC:9865 ! RARB +relationship: inverse_is_a HGNC:9866 ! RARG [Term] -id: FPLX:RAS +id: FPLX:000404 name: RAS synonym: "Ras GTPase" EXACT [] synonym: "RAS" EXACT [] @@ -6879,60 +6899,60 @@ xref: RE:R-HSA-109796 xref: RE:R-HSA-167204 xref: RE:R-HSA-6802607 xref: RE:R-HSA-6802608 -is_a: FPLX:root -inverse_is_a: HGNC:KRAS -inverse_is_a: HGNC:HRAS -inverse_is_a: HGNC:NRAS +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:6407 ! KRAS +relationship: inverse_is_a HGNC:5173 ! HRAS +relationship: inverse_is_a HGNC:7989 ! NRAS [Term] -id: FPLX:RASA +id: FPLX:000405 name: RASA synonym: "RASA" EXACT [] -is_a: FPLX:root -inverse_is_a: HGNC:RASA1 -inverse_is_a: HGNC:RASA2 -inverse_is_a: HGNC:RASA3 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:9871 ! RASA1 +relationship: inverse_is_a HGNC:9872 ! RASA2 +relationship: inverse_is_a HGNC:20331 ! RASA3 [Term] -id: FPLX:RASAL +id: FPLX:000406 name: RASAL synonym: "RASAL" EXACT [] -is_a: FPLX:root -inverse_is_a: HGNC:RASAL1 -inverse_is_a: HGNC:RASAL2 -inverse_is_a: HGNC:RASAL3 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:9873 ! RASAL1 +relationship: inverse_is_a HGNC:9874 ! RASAL2 +relationship: inverse_is_a HGNC:26129 ! RASAL3 [Term] -id: FPLX:RasGAP +id: FPLX:000407 name: RasGAP synonym: "RasGAP" EXACT [] synonym: "RasGAPs" EXACT [] xref: XFAM:PF00616 xref: RE:R-HSA-5658216 -is_a: FPLX:root +is_a: FPLX:000000 ! famplex [Term] -id: FPLX:RASGRF +id: FPLX:000408 name: RASGRF synonym: "RASGRF" EXACT [] xref: RE:R-HSA-442734 -is_a: FPLX:root -inverse_is_a: HGNC:RASGRF1 -inverse_is_a: HGNC:RASGRF2 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:9875 ! RASGRF1 +relationship: inverse_is_a HGNC:9876 ! RASGRF2 [Term] -id: FPLX:RASGRP +id: FPLX:000409 name: RASGRP synonym: "RASGRP" EXACT [] xref: RE:R-HSA-2685656 -is_a: FPLX:root -inverse_is_a: HGNC:RASGRP1 -inverse_is_a: HGNC:RASGRP2 -inverse_is_a: HGNC:RASGRP3 -inverse_is_a: HGNC:RASGRP4 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:9878 ! RASGRP1 +relationship: inverse_is_a HGNC:9879 ! RASGRP2 +relationship: inverse_is_a HGNC:14545 ! RASGRP3 +relationship: inverse_is_a HGNC:18958 ! RASGRP4 [Term] -id: FPLX:RASSF +id: FPLX:000410 name: RASSF synonym: "RAS association domain family" EXACT [] synonym: "Ras association domain family" EXACT [] @@ -6940,20 +6960,20 @@ synonym: "RAS-association domain family" EXACT [] synonym: "Ras-association domain family" EXACT [] synonym: "RASSF family" EXACT [] xref: IP:IPR033614 -is_a: FPLX:root -inverse_is_a: HGNC:RASSF1 -inverse_is_a: HGNC:RASSF2 -inverse_is_a: HGNC:RASSF3 -inverse_is_a: HGNC:RASSF4 -inverse_is_a: HGNC:RASSF5 -inverse_is_a: HGNC:RASSF6 -inverse_is_a: HGNC:RASSF7 -inverse_is_a: HGNC:RASSF8 -inverse_is_a: HGNC:RASSF9 -inverse_is_a: HGNC:RASSF10 - -[Term] -id: FPLX:RFC +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:9882 ! RASSF1 +relationship: inverse_is_a HGNC:9883 ! RASSF2 +relationship: inverse_is_a HGNC:14271 ! RASSF3 +relationship: inverse_is_a HGNC:20793 ! RASSF4 +relationship: inverse_is_a HGNC:17609 ! RASSF5 +relationship: inverse_is_a HGNC:20796 ! RASSF6 +relationship: inverse_is_a HGNC:1166 ! RASSF7 +relationship: inverse_is_a HGNC:13232 ! RASSF8 +relationship: inverse_is_a HGNC:15739 ! RASSF9 +relationship: inverse_is_a HGNC:33984 ! RASSF10 + +[Term] +id: FPLX:000411 name: RFC synonym: "DNA replication factor C complex" EXACT [] synonym: "DNA replication factor C" EXACT [] @@ -6965,15 +6985,15 @@ xref: GO:0005663 xref: MEDSCAN:urn:agi-complex:prophash-7629c2cdfdf4908b72f13917a7c1551e xref: RE:R-HSA-174454 xref: RE:R-HSA-68436 -is_a: FPLX:root -has_part: HGNC:RFC1 -has_part: HGNC:RFC2 -has_part: HGNC:RFC3 -has_part: HGNC:RFC4 -has_part: HGNC:RFC5 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:9969 ! RFC1 +relationship: has_part HGNC:9970 ! RFC2 +relationship: has_part HGNC:9971 ! RFC3 +relationship: has_part HGNC:9972 ! RFC4 +relationship: has_part HGNC:9973 ! RFC5 [Term] -id: FPLX:RFX +id: FPLX:000412 name: RFX synonym: "regulatory family X" EXACT [] synonym: "RF-X" EXACT [] @@ -6982,30 +7002,30 @@ synonym: "RFX proteins" EXACT [] synonym: "RFX" EXACT [] xref: BEL:"RFX Family" xref: MEDSCAN:urn:agi-aopfc:0000157 -is_a: FPLX:root -inverse_is_a: HGNC:RFX1 -inverse_is_a: HGNC:RFX2 -inverse_is_a: HGNC:RFX3 -inverse_is_a: HGNC:RFX4 -inverse_is_a: HGNC:RFX5 -inverse_is_a: HGNC:RFX6 -inverse_is_a: HGNC:RFX7 -inverse_is_a: HGNC:RFX8 - -[Term] -id: FPLX:RGL +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:9982 ! RFX1 +relationship: inverse_is_a HGNC:9983 ! RFX2 +relationship: inverse_is_a HGNC:9984 ! RFX3 +relationship: inverse_is_a HGNC:9985 ! RFX4 +relationship: inverse_is_a HGNC:9986 ! RFX5 +relationship: inverse_is_a HGNC:21478 ! RFX6 +relationship: inverse_is_a HGNC:25777 ! RFX7 +relationship: inverse_is_a HGNC:37253 ! RFX8 + +[Term] +id: FPLX:000413 name: RGL synonym: "RAL guanine nucleotide dissociation stimulator like" EXACT [] synonym: "Ral guanine nucleotide dissociation stimulator like" EXACT [] synonym: "ral guanine nucleotide dissociation stimulator like" EXACT [] synonym: "RALGDS-like" EXACT [] -is_a: FPLX:root -inverse_is_a: HGNC:RGL1 -inverse_is_a: HGNC:RGL2 -inverse_is_a: HGNC:RGL3 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:30281 ! RGL1 +relationship: inverse_is_a HGNC:9769 ! RGL2 +relationship: inverse_is_a HGNC:30282 ! RGL3 [Term] -id: FPLX:RHO +id: FPLX:000414 name: RHO synonym: "Rho family" EXACT [] synonym: "RHO" EXACT [] @@ -7015,13 +7035,13 @@ xref: NEXTPROT-FAMILY:03668 xref: RE:R-HSA-419160 xref: RE:R-HSA-419161 xref: RE:R-HSA-419164 -is_a: FPLX:root -inverse_is_a: HGNC:RHOA -inverse_is_a: HGNC:RHOB -inverse_is_a: HGNC:RHOC +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:667 ! RHOA +relationship: inverse_is_a HGNC:668 ! RHOB +relationship: inverse_is_a HGNC:669 ! RHOC [Term] -id: FPLX:RhoGDI +id: FPLX:000415 name: RhoGDI synonym: "Rho-GDI" EXACT [] synonym: "RHOGDI" EXACT [] @@ -7030,13 +7050,13 @@ synonym: "rhoGDI" EXACT [] synonym: "RhoGDIs" EXACT [] xref: GO:0005094 xref: IP:IPR000406 -is_a: FPLX:root -inverse_is_a: HGNC:ARHGDIA -inverse_is_a: HGNC:ARHGDIB -inverse_is_a: HGNC:ARHGDIG +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:678 ! ARHGDIA +relationship: inverse_is_a HGNC:679 ! ARHGDIB +relationship: inverse_is_a HGNC:680 ! ARHGDIG [Term] -id: FPLX:RNApo_I +id: FPLX:000416 name: RNApo-I synonym: "Pol I" EXACT [] synonym: "RNA polymerase 1" EXACT [] @@ -7044,14 +7064,14 @@ synonym: "RNA polymerase I" EXACT [] xref: BEL:"RNApo I Complex" xref: GO:0005736 xref: NCIT:C95947 -is_a: FPLX:root -has_part: HGNC:POLR1A -has_part: HGNC:POLR1B -has_part: HGNC:POLR1C -has_part: HGNC:POLR1D +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:17264 ! POLR1A +relationship: has_part HGNC:20454 ! POLR1B +relationship: has_part HGNC:20194 ! POLR1C +relationship: has_part HGNC:20422 ! POLR1D [Term] -id: FPLX:RNApo_II +id: FPLX:000417 name: RNApo-II synonym: "RNA polymerase II" EXACT [] synonym: "RNAP II" EXACT [] @@ -7059,32 +7079,32 @@ xref: BEL:"RNApo II Complex" xref: GO:0005665 xref: MEDSCAN:urn:agi-complex:prophash-d9fbae788d60df23b6be4a3ead2cbab4 xref: NCIT:C95948 -is_a: FPLX:root -has_part: HGNC:POLR2A -has_part: HGNC:POLR2B -has_part: HGNC:POLR2C -has_part: HGNC:POLR2D -has_part: HGNC:POLR2E -has_part: HGNC:POLR2F -has_part: HGNC:POLR2G -has_part: HGNC:POLR2H -has_part: HGNC:POLR2I -has_part: HGNC:POLR2J -has_part: HGNC:POLR2J2 -has_part: HGNC:POLR2K -has_part: HGNC:POLR2L - -[Term] -id: FPLX:ROBO +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:9187 ! POLR2A +relationship: has_part HGNC:9188 ! POLR2B +relationship: has_part HGNC:9189 ! POLR2C +relationship: has_part HGNC:9191 ! POLR2D +relationship: has_part HGNC:9192 ! POLR2E +relationship: has_part HGNC:9193 ! POLR2F +relationship: has_part HGNC:9194 ! POLR2G +relationship: has_part HGNC:9195 ! POLR2H +relationship: has_part HGNC:9196 ! POLR2I +relationship: has_part HGNC:9197 ! POLR2J +relationship: has_part HGNC:23208 ! POLR2J2 +relationship: has_part HGNC:9198 ! POLR2K +relationship: has_part HGNC:9199 ! POLR2L + +[Term] +id: FPLX:000418 name: ROBO xref: SIGNOR:SIGNOR-PF14 -is_a: FPLX:root -inverse_is_a: HGNC:ROBO1 -inverse_is_a: HGNC:ROBO2 -inverse_is_a: HGNC:ROBO3 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:10249 ! ROBO1 +relationship: inverse_is_a HGNC:10250 ! ROBO2 +relationship: inverse_is_a HGNC:13433 ! ROBO3 [Term] -id: FPLX:ROCK +id: FPLX:000419 name: ROCK synonym: "ROCK" EXACT [] xref: BEL:"ROCK Family" @@ -7092,12 +7112,12 @@ xref: IP:IPR015008 xref: IP:IPR020684 xref: RE:R-HSA-419057 xref: RE:R-HSA-4687776 -is_a: FPLX:root -inverse_is_a: HGNC:ROCK1 -inverse_is_a: HGNC:ROCK2 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:10251 ! ROCK1 +relationship: inverse_is_a HGNC:10252 ! ROCK2 [Term] -id: FPLX:ROR +id: FPLX:000420 name: ROR synonym: "receptor tyrosine kinase-like orphan receptor" EXACT [] synonym: "receptor tyrosine kinase-like orphan receptors" EXACT [] @@ -7107,39 +7127,39 @@ xref: BEL:"ROR Family" xref: IP:IPR016247 xref: MEDSCAN:urn:agi-aopfc:0000286 xref: NEXTPROT-FAMILY:03130 -is_a: FPLX:root -inverse_is_a: HGNC:ROR1 -inverse_is_a: HGNC:ROR2 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:10256 ! ROR1 +relationship: inverse_is_a HGNC:10257 ! ROR2 [Term] -id: FPLX:RPA +id: FPLX:000421 name: RPA synonym: "Replication protein A" EXACT [] synonym: "replication protein A" EXACT [] synonym: "RPA" EXACT [] xref: RE:R-HSA-68462 -is_a: FPLX:root -has_part: HGNC:RPA1 -has_part: HGNC:RPA2 -has_part: HGNC:RPA3 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:10289 ! RPA1 +relationship: has_part HGNC:10290 ! RPA2 +relationship: has_part HGNC:10291 ! RPA3 [Term] -id: FPLX:RSK +id: FPLX:000422 name: RSK synonym: "RSK" EXACT [] -is_a: FPLX:root -inverse_is_a: FPLX:P90RSK -inverse_is_a: FPLX:P70S6K +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a FPLX:000329 ! P90RSK +relationship: inverse_is_a FPLX:000328 ! P70S6K [Term] -id: FPLX:RTK +id: FPLX:000423 name: RTK synonym: "RTKs" EXACT [] xref: NCIT:C17660 -is_a: FPLX:root +is_a: FPLX:000000 ! famplex [Term] -id: FPLX:RXR +id: FPLX:000424 name: RXR synonym: "retinoid X receptors" EXACT [] synonym: "retinoid-X receptor" EXACT [] @@ -7148,50 +7168,50 @@ xref: BEL:"RXR Family" xref: GO:0004886 xref: MEDSCAN:urn:agi-complex:prophash-bd459ca2937257c9e3f2b75abf22f422 xref: NCIT:C17534 -is_a: FPLX:root -inverse_is_a: HGNC:RXRA -inverse_is_a: HGNC:RXRB -inverse_is_a: HGNC:RXRG +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:10477 ! RXRA +relationship: inverse_is_a HGNC:10478 ! RXRB +relationship: inverse_is_a HGNC:10479 ! RXRG [Term] -id: FPLX:S100 +id: FPLX:000425 name: S100 synonym: "S100" EXACT [] -is_a: FPLX:root -inverse_is_a: FPLX:S100A -inverse_is_a: HGNC:S100B -inverse_is_a: HGNC:S100G -inverse_is_a: HGNC:S100P -inverse_is_a: HGNC:S100Z +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a FPLX:000426 ! S100A +relationship: inverse_is_a HGNC:10500 ! S100B +relationship: inverse_is_a HGNC:1436 ! S100G +relationship: inverse_is_a HGNC:10504 ! S100P +relationship: inverse_is_a HGNC:30367 ! S100Z [Term] -id: FPLX:S100A +id: FPLX:000426 name: S100A synonym: "S100A" EXACT [] synonym: "S100a" EXACT [] xref: BEL:"S100A Family" -is_a: FPLX:S100 -inverse_is_a: HGNC:HRNR -inverse_is_a: HGNC:S100A1 -inverse_is_a: HGNC:S100A10 -inverse_is_a: HGNC:S100A11 -inverse_is_a: HGNC:S100A12 -inverse_is_a: HGNC:S100A13 -inverse_is_a: HGNC:S100A14 -inverse_is_a: HGNC:S100A16 -inverse_is_a: HGNC:S100A2 -inverse_is_a: HGNC:S100A3 -inverse_is_a: HGNC:S100A4 -inverse_is_a: HGNC:S100A5 -inverse_is_a: HGNC:S100A6 -inverse_is_a: HGNC:S100A7 -inverse_is_a: HGNC:S100A7A -inverse_is_a: HGNC:S100A8 -inverse_is_a: HGNC:S100A9 -inverse_is_a: HGNC:TCHHL1 - -[Term] -id: FPLX:S1PR +is_a: FPLX:000425 ! S100 +relationship: inverse_is_a HGNC:20846 ! HRNR +relationship: inverse_is_a HGNC:10486 ! S100A1 +relationship: inverse_is_a HGNC:10487 ! S100A10 +relationship: inverse_is_a HGNC:10488 ! S100A11 +relationship: inverse_is_a HGNC:10489 ! S100A12 +relationship: inverse_is_a HGNC:10490 ! S100A13 +relationship: inverse_is_a HGNC:18901 ! S100A14 +relationship: inverse_is_a HGNC:20441 ! S100A16 +relationship: inverse_is_a HGNC:10492 ! S100A2 +relationship: inverse_is_a HGNC:10493 ! S100A3 +relationship: inverse_is_a HGNC:10494 ! S100A4 +relationship: inverse_is_a HGNC:10495 ! S100A5 +relationship: inverse_is_a HGNC:10496 ! S100A6 +relationship: inverse_is_a HGNC:10497 ! S100A7 +relationship: inverse_is_a HGNC:21657 ! S100A7A +relationship: inverse_is_a HGNC:10498 ! S100A8 +relationship: inverse_is_a HGNC:10499 ! S100A9 +relationship: inverse_is_a HGNC:31796 ! TCHHL1 + +[Term] +id: FPLX:000427 name: S1PR synonym: "S1P receptor" EXACT [] synonym: "S1PR" EXACT [] @@ -7202,28 +7222,28 @@ xref: GO:0038036 xref: IP:IPR004061 xref: RE:R-HSA-419346 xref: RE:R-HSA-419401 -is_a: FPLX:root -inverse_is_a: HGNC:S1PR1 -inverse_is_a: HGNC:S1PR2 -inverse_is_a: HGNC:S1PR3 -inverse_is_a: HGNC:S1PR4 -inverse_is_a: HGNC:S1PR5 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:3165 ! S1PR1 +relationship: inverse_is_a HGNC:3169 ! S1PR2 +relationship: inverse_is_a HGNC:3167 ! S1PR3 +relationship: inverse_is_a HGNC:3170 ! S1PR4 +relationship: inverse_is_a HGNC:14299 ! S1PR5 [Term] -id: FPLX:SAA +id: FPLX:000428 name: SAA synonym: "SAA" EXACT [] xref: BEL:"SAA Family" xref: IP:IPR000096 xref: NEXTPROT-FAMILY:03483 xref: XFAM:PF00277 -is_a: FPLX:root -inverse_is_a: HGNC:SAA1 -inverse_is_a: HGNC:SAA2 -inverse_is_a: HGNC:SAA4 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:10513 ! SAA1 +relationship: inverse_is_a HGNC:10514 ! SAA2 +relationship: inverse_is_a HGNC:10516 ! SAA4 [Term] -id: FPLX:SCD +id: FPLX:000429 name: SCD synonym: "stearoyl-CoA 9-desaturase" EXACT [] synonym: "Stearoyl-CoA desaturase" EXACT [] @@ -7232,12 +7252,12 @@ xref: BEL:"SCD Family" xref: ECCODE:1.14.19.1 xref: IP:IPR001522 xref: IP:IPR015876 -is_a: FPLX:root -inverse_is_a: HGNC:SCD -inverse_is_a: HGNC:SCD5 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:10571 ! SCD +relationship: inverse_is_a HGNC:21088 ! SCD5 [Term] -id: FPLX:SERCA +id: FPLX:000430 name: SERCA synonym: "sarcoplasmic/endoplasmic reticulum calcium ATPase" EXACT [] synonym: "SERCA" EXACT [] @@ -7248,36 +7268,36 @@ xref: IP:IPR005782 xref: MEDSCAN:urn:agi-protfc:sarcoplasmic%20reticulum%20calcium%20transporting%20adenosine%20triphosphatase xref: RE:R-HSA-418312 xref: RE:R-HSA-427905 -is_a: FPLX:root -inverse_is_a: HGNC:ATP2A1 -inverse_is_a: HGNC:ATP2A2 -inverse_is_a: HGNC:ATP2A3 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:811 ! ATP2A1 +relationship: inverse_is_a HGNC:812 ! ATP2A2 +relationship: inverse_is_a HGNC:813 ! ATP2A3 [Term] -id: FPLX:SERPINB +id: FPLX:000431 name: SERPINB synonym: "Clade B serpin" EXACT [] synonym: "clade B serpins" EXACT [] synonym: "ov-serpins" EXACT [] xref: BEL:"SERPINB Family" xref: NEXTPROT-FAMILY:03579 -is_a: FPLX:root -inverse_is_a: HGNC:SERPINB1 -inverse_is_a: HGNC:SERPINB2 -inverse_is_a: HGNC:SERPINB3 -inverse_is_a: HGNC:SERPINB4 -inverse_is_a: HGNC:SERPINB5 -inverse_is_a: HGNC:SERPINB6 -inverse_is_a: HGNC:SERPINB7 -inverse_is_a: HGNC:SERPINB8 -inverse_is_a: HGNC:SERPINB9 -inverse_is_a: HGNC:SERPINB10 -inverse_is_a: HGNC:SERPINB11 -inverse_is_a: HGNC:SERPINB12 -inverse_is_a: HGNC:SERPINB13 - -[Term] -id: FPLX:SHC +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:3311 ! SERPINB1 +relationship: inverse_is_a HGNC:8584 ! SERPINB2 +relationship: inverse_is_a HGNC:10569 ! SERPINB3 +relationship: inverse_is_a HGNC:10570 ! SERPINB4 +relationship: inverse_is_a HGNC:8949 ! SERPINB5 +relationship: inverse_is_a HGNC:8950 ! SERPINB6 +relationship: inverse_is_a HGNC:13902 ! SERPINB7 +relationship: inverse_is_a HGNC:8952 ! SERPINB8 +relationship: inverse_is_a HGNC:8955 ! SERPINB9 +relationship: inverse_is_a HGNC:8942 ! SERPINB10 +relationship: inverse_is_a HGNC:14221 ! SERPINB11 +relationship: inverse_is_a HGNC:14220 ! SERPINB12 +relationship: inverse_is_a HGNC:8944 ! SERPINB13 + +[Term] +id: FPLX:000432 name: SHC synonym: "Shc family" EXACT [] synonym: "SHC" EXACT [] @@ -7285,24 +7305,24 @@ synonym: "Shc" EXACT [] xref: IP:IPR006019 xref: MEDSCAN:urn:agi-protfc:shc%20protein xref: RE:R-HSA-167023 -is_a: FPLX:root -inverse_is_a: HGNC:SHC1 -inverse_is_a: HGNC:SHC2 -inverse_is_a: HGNC:SHC3 -inverse_is_a: HGNC:SHC4 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:10840 ! SHC1 +relationship: inverse_is_a HGNC:29869 ! SHC2 +relationship: inverse_is_a HGNC:18181 ! SHC3 +relationship: inverse_is_a HGNC:16743 ! SHC4 [Term] -id: FPLX:SIK +id: FPLX:000433 name: SIK synonym: "SIK" EXACT [] synonym: "salt inducible kinase" EXACT [] -is_a: FPLX:root -inverse_is_a: HGNC:SIK1 -inverse_is_a: HGNC:SIK2 -inverse_is_a: HGNC:SIK3 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:11142 ! SIK1 +relationship: inverse_is_a HGNC:21680 ! SIK2 +relationship: inverse_is_a HGNC:29165 ! SIK3 [Term] -id: FPLX:SLC2A +id: FPLX:000434 name: SLC2A synonym: "glucose transporter" EXACT [] synonym: "glucose transporters" EXACT [] @@ -7311,23 +7331,23 @@ synonym: "SLC2" EXACT [] xref: BEL:"SLC2A Family" xref: GO:0005355 xref: NEXTPROT-FAMILY:02159 -is_a: FPLX:root -inverse_is_a: HGNC:SLC2A1 -inverse_is_a: HGNC:SLC2A2 -inverse_is_a: HGNC:SLC2A3 -inverse_is_a: HGNC:SLC2A4 -inverse_is_a: HGNC:SLC2A5 -inverse_is_a: HGNC:SLC2A6 -inverse_is_a: HGNC:SLC2A7 -inverse_is_a: HGNC:SLC2A8 -inverse_is_a: HGNC:SLC2A9 -inverse_is_a: HGNC:SLC2A10 -inverse_is_a: HGNC:SLC2A11 -inverse_is_a: HGNC:SLC2A12 -inverse_is_a: HGNC:SLC2A14 - -[Term] -id: FPLX:SLRP +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:11005 ! SLC2A1 +relationship: inverse_is_a HGNC:11006 ! SLC2A2 +relationship: inverse_is_a HGNC:11007 ! SLC2A3 +relationship: inverse_is_a HGNC:11009 ! SLC2A4 +relationship: inverse_is_a HGNC:11010 ! SLC2A5 +relationship: inverse_is_a HGNC:11011 ! SLC2A6 +relationship: inverse_is_a HGNC:13445 ! SLC2A7 +relationship: inverse_is_a HGNC:13812 ! SLC2A8 +relationship: inverse_is_a HGNC:13446 ! SLC2A9 +relationship: inverse_is_a HGNC:13444 ! SLC2A10 +relationship: inverse_is_a HGNC:14239 ! SLC2A11 +relationship: inverse_is_a HGNC:18067 ! SLC2A12 +relationship: inverse_is_a HGNC:18301 ! SLC2A14 + +[Term] +id: FPLX:000435 name: SLRP synonym: "SLRP" EXACT [] synonym: "SLRPs" EXACT [] @@ -7341,62 +7361,62 @@ synonym: "small leucine-rich proteoglycan" EXACT [] synonym: "small leucine-rich proteoglycans" EXACT [] xref: NEXTPROT-FAMILY:03672 xref: SIGNOR:SIGNOR-PF31 -is_a: FPLX:root -inverse_is_a: FPLX:SLRP_1 -inverse_is_a: FPLX:SLRP_2 -inverse_is_a: FPLX:SLRP_3 -inverse_is_a: FPLX:SLRP_4 -inverse_is_a: FPLX:SLRP_5 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a FPLX:000436 ! SLRP_1 +relationship: inverse_is_a FPLX:000437 ! SLRP_2 +relationship: inverse_is_a FPLX:000438 ! SLRP_3 +relationship: inverse_is_a FPLX:000439 ! SLRP_4 +relationship: inverse_is_a FPLX:000440 ! SLRP_5 [Term] -id: FPLX:SLRP_1 +id: FPLX:000436 name: SLRP-1 xref: NEXTPROT-FAMILY:03673 -is_a: FPLX:SLRP -inverse_is_a: HGNC:BGN -inverse_is_a: HGNC:DCN -inverse_is_a: HGNC:ASPN -inverse_is_a: HGNC:ECM2 +is_a: FPLX:000435 ! SLRP +relationship: inverse_is_a HGNC:1044 ! BGN +relationship: inverse_is_a HGNC:2705 ! DCN +relationship: inverse_is_a HGNC:14872 ! ASPN +relationship: inverse_is_a HGNC:3154 ! ECM2 [Term] -id: FPLX:SLRP_2 +id: FPLX:000437 name: SLRP-2 xref: NEXTPROT-FAMILY:03674 -is_a: FPLX:SLRP -inverse_is_a: HGNC:FMOD -inverse_is_a: HGNC:LUM -inverse_is_a: HGNC:PRELP -inverse_is_a: HGNC:KERA -inverse_is_a: HGNC:OMD +is_a: FPLX:000435 ! SLRP +relationship: inverse_is_a HGNC:3774 ! FMOD +relationship: inverse_is_a HGNC:6724 ! LUM +relationship: inverse_is_a HGNC:9357 ! PRELP +relationship: inverse_is_a HGNC:6309 ! KERA +relationship: inverse_is_a HGNC:8134 ! OMD [Term] -id: FPLX:SLRP_3 +id: FPLX:000438 name: SLRP-3 xref: NEXTPROT-FAMILY:03675 -is_a: FPLX:SLRP -inverse_is_a: HGNC:EPYC -inverse_is_a: HGNC:OPTC -inverse_is_a: HGNC:OGN +is_a: FPLX:000435 ! SLRP +relationship: inverse_is_a HGNC:3053 ! EPYC +relationship: inverse_is_a HGNC:8158 ! OPTC +relationship: inverse_is_a HGNC:8126 ! OGN [Term] -id: FPLX:SLRP_4 +id: FPLX:000439 name: SLRP-4 xref: NEXTPROT-FAMILY:03676 -is_a: FPLX:SLRP -inverse_is_a: HGNC:CHAD -inverse_is_a: HGNC:NYX -inverse_is_a: HGNC:TSKU +is_a: FPLX:000435 ! SLRP +relationship: inverse_is_a HGNC:1909 ! CHAD +relationship: inverse_is_a HGNC:8082 ! NYX +relationship: inverse_is_a HGNC:28850 ! TSKU [Term] -id: FPLX:SLRP_5 +id: FPLX:000440 name: SLRP-5 xref: NEXTPROT-FAMILY:03677 -is_a: FPLX:SLRP -inverse_is_a: HGNC:PODN -inverse_is_a: HGNC:PODNL1 +is_a: FPLX:000435 ! SLRP +relationship: inverse_is_a HGNC:23174 ! PODN +relationship: inverse_is_a HGNC:26275 ! PODNL1 [Term] -id: FPLX:SMAD +id: FPLX:000441 name: SMAD synonym: "SMAD" EXACT [] synonym: "Smad" EXACT [] @@ -7407,27 +7427,27 @@ xref: IP:IPR013019 xref: IP:IPR013790 xref: MEDSCAN:urn:agi-aopfc:0000159 xref: MEDSCAN:urn:agi-complex:prophash-72ef5fc0ab431a39e0e2915bf55b6e28 -is_a: FPLX:root -inverse_is_a: HGNC:SMAD1 -inverse_is_a: HGNC:SMAD4 -inverse_is_a: HGNC:SMAD5 -inverse_is_a: HGNC:SMAD6 -inverse_is_a: HGNC:SMAD7 -inverse_is_a: HGNC:SMAD9 -inverse_is_a: FPLX:SMAD2_3 -inverse_is_a: FPLX:SMAD1_5_9 - -[Term] -id: FPLX:SMAD1_5_9 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:6767 ! SMAD1 +relationship: inverse_is_a HGNC:6770 ! SMAD4 +relationship: inverse_is_a HGNC:6771 ! SMAD5 +relationship: inverse_is_a HGNC:6772 ! SMAD6 +relationship: inverse_is_a HGNC:6773 ! SMAD7 +relationship: inverse_is_a HGNC:6774 ! SMAD9 +relationship: inverse_is_a FPLX:000443 ! SMAD2_3 +relationship: inverse_is_a FPLX:000442 ! SMAD1_5_9 + +[Term] +id: FPLX:000442 name: SMAD1-5-9 xref: SIGNOR:SIGNOR-PF35 -is_a: FPLX:SMAD -inverse_is_a: HGNC:SMAD1 -inverse_is_a: HGNC:SMAD5 -inverse_is_a: HGNC:SMAD9 +is_a: FPLX:000441 ! SMAD +relationship: inverse_is_a HGNC:6767 ! SMAD1 +relationship: inverse_is_a HGNC:6771 ! SMAD5 +relationship: inverse_is_a HGNC:6774 ! SMAD9 [Term] -id: FPLX:SMAD2_3 +id: FPLX:000443 name: SMAD2-3 synonym: "SMAD 2/3" EXACT [] synonym: "SMAD2/3" EXACT [] @@ -7439,83 +7459,83 @@ xref: RE:R-HSA-177105 xref: RE:R-HSA-2176482 xref: RE:R-HSA-2187329 xref: RE:R-HSA-2187387 -is_a: FPLX:SMAD -inverse_is_a: HGNC:SMAD2 -inverse_is_a: HGNC:SMAD3 +is_a: FPLX:000441 ! SMAD +relationship: inverse_is_a HGNC:6768 ! SMAD2 +relationship: inverse_is_a HGNC:6769 ! SMAD3 [Term] -id: FPLX:SMC1 +id: FPLX:000444 name: SMC1 synonym: "SMC1" EXACT [] synonym: "Smc1" EXACT [] xref: BEL:"SMC1 Family" xref: NEXTPROT-FAMILY:03686 -is_a: FPLX:root -inverse_is_a: HGNC:SMC1A -inverse_is_a: HGNC:SMC1B +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:11111 ! SMC1A +relationship: inverse_is_a HGNC:11112 ! SMC1B [Term] -id: FPLX:SMURF +id: FPLX:000445 name: SMURF xref: SIGNOR:SIGNOR-PF29 -is_a: FPLX:root -inverse_is_a: HGNC:SMURF1 -inverse_is_a: HGNC:SMURF2 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:16807 ! SMURF1 +relationship: inverse_is_a HGNC:16809 ! SMURF2 [Term] -id: FPLX:SNAI +id: FPLX:000446 name: SNAI synonym: "SNAI family" EXACT [] synonym: "SNAI" EXACT [] xref: BEL:"SNAI Family" -is_a: FPLX:root -inverse_is_a: HGNC:SNAI1 -inverse_is_a: HGNC:SNAI2 -inverse_is_a: HGNC:SNAI3 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:11128 ! SNAI1 +relationship: inverse_is_a HGNC:11094 ! SNAI2 +relationship: inverse_is_a HGNC:18411 ! SNAI3 [Term] -id: FPLX:SOD +id: FPLX:000447 name: SOD synonym: "SOD" EXACT [] xref: BEL:"Cu-Zn SOD Family" -is_a: FPLX:root -inverse_is_a: HGNC:SOD1 -inverse_is_a: HGNC:SOD2 -inverse_is_a: HGNC:SOD3 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:11179 ! SOD1 +relationship: inverse_is_a HGNC:11180 ! SOD2 +relationship: inverse_is_a HGNC:11181 ! SOD3 [Term] -id: FPLX:SOS +id: FPLX:000448 name: SOS synonym: "SOS" EXACT [] xref: BEL:"SOS Family" xref: RE:R-HSA-167215 -is_a: FPLX:root -inverse_is_a: HGNC:SOS1 -inverse_is_a: HGNC:SOS2 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:11187 ! SOS1 +relationship: inverse_is_a HGNC:11188 ! SOS2 [Term] -id: FPLX:SPRED +id: FPLX:000449 name: SPRED synonym: "SPRED" EXACT [] xref: IP:IPR023337 xref: RE:R-HSA-5658219 -is_a: FPLX:root -inverse_is_a: HGNC:SPRED1 -inverse_is_a: HGNC:SPRED2 -inverse_is_a: HGNC:SPRED3 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:20249 ! SPRED1 +relationship: inverse_is_a HGNC:17722 ! SPRED2 +relationship: inverse_is_a HGNC:31041 ! SPRED3 [Term] -id: FPLX:SPRY +id: FPLX:000450 name: SPRY synonym: "SPRY" EXACT [] -is_a: FPLX:root -inverse_is_a: HGNC:SPRY1 -inverse_is_a: HGNC:SPRY2 -inverse_is_a: HGNC:SPRY3 -inverse_is_a: HGNC:SPRY4 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:11269 ! SPRY1 +relationship: inverse_is_a HGNC:11270 ! SPRY2 +relationship: inverse_is_a HGNC:11271 ! SPRY3 +relationship: inverse_is_a HGNC:15533 ! SPRY4 [Term] -id: FPLX:SRC +id: FPLX:000451 name: SRC synonym: "SFK" EXACT [] synonym: "Src family kinase" EXACT [] @@ -7527,14 +7547,14 @@ xref: BEL:"SRC Family" xref: MEDSCAN:urn:agi-aopfc:0000509 xref: NEXTPROT-FAMILY:03131 xref: SIGNOR:SIGNOR-PF32 -is_a: FPLX:root -inverse_is_a: HGNC:FGR -inverse_is_a: HGNC:FYN -inverse_is_a: HGNC:SRC -inverse_is_a: HGNC:YES1 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:3697 ! FGR +relationship: inverse_is_a HGNC:4037 ! FYN +relationship: inverse_is_a HGNC:11283 ! SRC +relationship: inverse_is_a HGNC:12841 ! YES1 [Term] -id: FPLX:SREBF +id: FPLX:000452 name: SREBF synonym: "SREBF family" EXACT [] synonym: "SREBF" EXACT [] @@ -7548,12 +7568,12 @@ xref: RE:R-HSA-1655726 xref: RE:R-HSA-1655730 xref: RE:R-HSA-1655732 xref: RE:R-HSA-1655734 -is_a: FPLX:root -inverse_is_a: HGNC:SREBF1 -inverse_is_a: HGNC:SREBF2 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:11289 ! SREBF1 +relationship: inverse_is_a HGNC:11290 ! SREBF2 [Term] -id: FPLX:STAT +id: FPLX:000453 name: STAT synonym: "STAT" EXACT [] synonym: "STATs" EXACT [] @@ -7567,16 +7587,16 @@ xref: IP:IPR015988 xref: MEDSCAN:urn:agi-aopfc:0000163 xref: MEDSCAN:urn:agi-complex:prophash-2de597c3f4a807f3caeaf02e5f93ce15 xref: NCIT:C19618 -is_a: FPLX:root -inverse_is_a: HGNC:STAT1 -inverse_is_a: HGNC:STAT2 -inverse_is_a: HGNC:STAT3 -inverse_is_a: HGNC:STAT4 -inverse_is_a: HGNC:STAT6 -inverse_is_a: FPLX:STAT5 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:11362 ! STAT1 +relationship: inverse_is_a HGNC:11363 ! STAT2 +relationship: inverse_is_a HGNC:11364 ! STAT3 +relationship: inverse_is_a HGNC:11365 ! STAT4 +relationship: inverse_is_a HGNC:11368 ! STAT6 +relationship: inverse_is_a FPLX:000454 ! STAT5 [Term] -id: FPLX:STAT5 +id: FPLX:000454 name: STAT5 synonym: "STAT5" EXACT [] synonym: "Stat5" EXACT [] @@ -7588,20 +7608,20 @@ xref: RE:R-HSA-507919 xref: RE:R-HSA-507929 xref: RE:R-HSA-508012 xref: RE:R-HSA-8865622 -is_a: FPLX:STAT -inverse_is_a: HGNC:STAT5A -inverse_is_a: HGNC:STAT5B +is_a: FPLX:000453 ! STAT +relationship: inverse_is_a HGNC:11366 ! STAT5A +relationship: inverse_is_a HGNC:11367 ! STAT5B [Term] -id: FPLX:STT3 +id: FPLX:000455 name: STT3 synonym: "STT3" EXACT [] -is_a: FPLX:Glycosyltransferase -inverse_is_a: HGNC:STT3A -inverse_is_a: HGNC:STT3B +is_a: FPLX:000198 ! Glycosyltransferase +relationship: inverse_is_a HGNC:6172 ! STT3A +relationship: inverse_is_a HGNC:30611 ! STT3B [Term] -id: FPLX:Sulfonylurea_receptor +id: FPLX:000456 name: Sulfonylurea-receptor synonym: "Sulfonylurea Receptor" EXACT [] synonym: "sulfonylurea receptor" EXACT [] @@ -7610,12 +7630,12 @@ synonym: "SUR" EXACT [] xref: BEL:"Sulfonylurea Receptor Family" xref: GO:0008281 xref: IP:IPR000388 -is_a: FPLX:root -inverse_is_a: HGNC:ABCC8 -inverse_is_a: HGNC:ABCC9 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:59 ! ABCC8 +relationship: inverse_is_a HGNC:60 ! ABCC9 [Term] -id: FPLX:SWI_SNF +id: FPLX:000457 name: SWI-SNF synonym: "SWI and SNF complex" EXACT [] synonym: "SWI/SNF complex" EXACT [] @@ -7626,47 +7646,47 @@ xref: MEDSCAN:urn:agi-complex:prophash-f7a9dc05e48afd7a93466cfbd5504861 xref: MEDSCAN:urn:agi-protfc:chromatin%20remodeling%20complex xref: MEDSCAN:urn:agi-protfc:SWI%2fSNF%20family xref: NCIT:C20591 -is_a: FPLX:root -has_part: HGNC:ARID1A -has_part: HGNC:ARID1B -has_part: HGNC:SMARCA1 -has_part: HGNC:SMARCA2 -has_part: HGNC:SMARCA4 -has_part: HGNC:SMARCA5 -has_part: HGNC:SMARCB1 -has_part: HGNC:SMARCC1 -has_part: HGNC:SMARCC2 -has_part: HGNC:SMARCD1 -has_part: HGNC:SMARCD2 -has_part: HGNC:SMARCD3 -has_part: HGNC:SMARCE1 -has_part: HGNC:ACTL6A -has_part: HGNC:ACTL6B -has_part: HGNC:HLTF - -[Term] -id: FPLX:TAOK +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:11110 ! ARID1A +relationship: has_part HGNC:18040 ! ARID1B +relationship: has_part HGNC:11097 ! SMARCA1 +relationship: has_part HGNC:11098 ! SMARCA2 +relationship: has_part HGNC:11100 ! SMARCA4 +relationship: has_part HGNC:11101 ! SMARCA5 +relationship: has_part HGNC:11103 ! SMARCB1 +relationship: has_part HGNC:11104 ! SMARCC1 +relationship: has_part HGNC:11105 ! SMARCC2 +relationship: has_part HGNC:11106 ! SMARCD1 +relationship: has_part HGNC:11107 ! SMARCD2 +relationship: has_part HGNC:11108 ! SMARCD3 +relationship: has_part HGNC:11109 ! SMARCE1 +relationship: has_part HGNC:24124 ! ACTL6A +relationship: has_part HGNC:160 ! ACTL6B +relationship: has_part HGNC:11099 ! HLTF + +[Term] +id: FPLX:000458 name: TAOK xref: SIGNOR:SIGNOR-PF21 -is_a: FPLX:MAP3K -inverse_is_a: HGNC:TAOK1 -inverse_is_a: HGNC:TAOK2 -inverse_is_a: HGNC:TAOK3 +is_a: FPLX:000282 ! MAP3K +relationship: inverse_is_a HGNC:29259 ! TAOK1 +relationship: inverse_is_a HGNC:16835 ! TAOK2 +relationship: inverse_is_a HGNC:18133 ! TAOK3 [Term] -id: FPLX:TAP +id: FPLX:000459 name: TAP synonym: "TAP transporter" EXACT [] synonym: "TAP" EXACT [] xref: BEL:"TAP Family" xref: GO:0042825 -is_a: FPLX:root -inverse_is_a: HGNC:TAP1 -inverse_is_a: HGNC:TAP2 -inverse_is_a: HGNC:ABCB9 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:43 ! TAP1 +relationship: inverse_is_a HGNC:44 ! TAP2 +relationship: inverse_is_a HGNC:50 ! ABCB9 [Term] -id: FPLX:TCF_LEF +id: FPLX:000460 name: TCF-LEF synonym: "T-cell factor (TCF)/lymphoid enhancer factor" EXACT [] synonym: "TCF" EXACT [] @@ -7680,36 +7700,36 @@ xref: RE:R-HSA-3299546 xref: RE:R-HSA-5323539 xref: RE:R-HSA-8944354 xref: RE:R-HSA-8951427 -is_a: FPLX:root -inverse_is_a: HGNC:LEF1 -inverse_is_a: HGNC:TCF7 -inverse_is_a: HGNC:TCF7L1 -inverse_is_a: HGNC:TCF7L2 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:6551 ! LEF1 +relationship: inverse_is_a HGNC:11639 ! TCF7 +relationship: inverse_is_a HGNC:11640 ! TCF7L1 +relationship: inverse_is_a HGNC:11641 ! TCF7L2 [Term] -id: FPLX:TCR +id: FPLX:000461 name: TCR synonym: "TCR" EXACT [] xref: MESH:D011948 xref: NCIT:C17065 -is_a: FPLX:root -has_part: HGNC:TRA -has_part: HGNC:TRB -has_part: HGNC:TRD -has_part: HGNC:TRG +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:12027 ! TRA +relationship: has_part HGNC:12155 ! TRB +relationship: has_part HGNC:12252 ! TRD +relationship: has_part HGNC:12271 ! TRG [Term] -id: FPLX:TEAD +id: FPLX:000462 name: TEAD xref: SIGNOR:SIGNOR-PF22 -is_a: FPLX:root -inverse_is_a: HGNC:TEAD1 -inverse_is_a: HGNC:TEAD2 -inverse_is_a: HGNC:TEAD3 -inverse_is_a: HGNC:TEAD4 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:11714 ! TEAD1 +relationship: inverse_is_a HGNC:11715 ! TEAD2 +relationship: inverse_is_a HGNC:11716 ! TEAD3 +relationship: inverse_is_a HGNC:11717 ! TEAD4 [Term] -id: FPLX:TFAP2 +id: FPLX:000463 name: TFAP2 synonym: "AP-2 transcription factor" EXACT [] synonym: "Transcription factor AP-2" EXACT [] @@ -7720,27 +7740,27 @@ xref: IP:IPR013854 xref: NEXTPROT-FAMILY:00209 xref: RE:R-HSA-8864283 xref: RE:R-HSA-8864286 -is_a: FPLX:root -inverse_is_a: HGNC:TFAP2A -inverse_is_a: HGNC:TFAP2B -inverse_is_a: HGNC:TFAP2C -inverse_is_a: HGNC:TFAP2D -inverse_is_a: HGNC:TFAP2E +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:11742 ! TFAP2A +relationship: inverse_is_a HGNC:11743 ! TFAP2B +relationship: inverse_is_a HGNC:11744 ! TFAP2C +relationship: inverse_is_a HGNC:15581 ! TFAP2D +relationship: inverse_is_a HGNC:30774 ! TFAP2E [Term] -id: FPLX:TFDP +id: FPLX:000464 name: TFDP synonym: "DP complex" EXACT [] synonym: "TFDP" EXACT [] synonym: "transcription factor DP" EXACT [] xref: BEL:"TFDP Family" xref: RE:R-HSA-1362227 -is_a: FPLX:root -inverse_is_a: HGNC:TFDP1 -inverse_is_a: HGNC:TFDP2 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:11749 ! TFDP1 +relationship: inverse_is_a HGNC:11751 ! TFDP2 [Term] -id: FPLX:TGFB +id: FPLX:000465 name: TGFB synonym: "TGF beta" EXACT [] synonym: "TGF β" EXACT [] @@ -7764,13 +7784,13 @@ xref: NEXTPROT-FAMILY:03989 xref: RE:R-HSA-114657 xref: RE:R-HSA-2395330 xref: SIGNOR:SIGNOR-PF5 -is_a: FPLX:root -inverse_is_a: HGNC:TGFB1 -inverse_is_a: HGNC:TGFB2 -inverse_is_a: HGNC:TGFB3 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:11766 ! TGFB1 +relationship: inverse_is_a HGNC:11768 ! TGFB2 +relationship: inverse_is_a HGNC:11769 ! TGFB3 [Term] -id: FPLX:TGFBR +id: FPLX:000466 name: TGFBR synonym: "TGF beta receptor" EXACT [] synonym: "TGF β receptor" EXACT [] @@ -7784,13 +7804,13 @@ synonym: "TGFβ receptor" EXACT [] synonym: "TGFβ receptors" EXACT [] xref: MEDSCAN:urn:agi-aopfc:0000294 xref: MEDSCAN:urn:agi-complex:prophash-9e456bf1de2c5eb1107156c96a1450e6 -is_a: FPLX:root -inverse_is_a: HGNC:TGFBR1 -inverse_is_a: HGNC:TGFBR2 -inverse_is_a: HGNC:TGFBR3 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:11772 ! TGFBR1 +relationship: inverse_is_a HGNC:11773 ! TGFBR2 +relationship: inverse_is_a HGNC:11774 ! TGFBR3 [Term] -id: FPLX:THBS +id: FPLX:000467 name: THBS synonym: "thrombospondin protein" EXACT [] synonym: "Thrombospondin" EXACT [] @@ -7803,75 +7823,75 @@ xref: IP:IPR008859 xref: IP:IPR017897 xref: IP:IPR028974 xref: MEDSCAN:urn:agi-protfc:thrombospondins -is_a: FPLX:root -inverse_is_a: HGNC:THBS1 -inverse_is_a: HGNC:THBS2 -inverse_is_a: HGNC:THBS3 -inverse_is_a: HGNC:THBS4 -inverse_is_a: HGNC:COMP +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:11785 ! THBS1 +relationship: inverse_is_a HGNC:11786 ! THBS2 +relationship: inverse_is_a HGNC:11787 ! THBS3 +relationship: inverse_is_a HGNC:11788 ! THBS4 +relationship: inverse_is_a HGNC:2227 ! COMP [Term] -id: FPLX:THR +id: FPLX:000468 name: THR synonym: "thyroid hormone receptor" EXACT [] xref: BEL:"THR Family" xref: NCIT:C17078 -is_a: FPLX:root -inverse_is_a: HGNC:THRA -inverse_is_a: HGNC:THRB +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:11796 ! THRA +relationship: inverse_is_a HGNC:11799 ! THRB [Term] -id: FPLX:Thrombin_antithrombin +id: FPLX:000469 name: Thrombin-antithrombin synonym: "thrombin-anti-thrombin III complexes" EXACT [] xref: BEL:"Thrombin Antithrombin Complex" xref: RE:R-HSA-140812 xref: RE:R-HSA-140871 xref: RE:R-HSA-140874 -is_a: FPLX:root -has_part: HGNC:F2 -has_part: HGNC:SERPINC1 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:3535 ! F2 +relationship: has_part HGNC:775 ! SERPINC1 [Term] -id: FPLX:TIAM +id: FPLX:000470 name: TIAM synonym: "TIAM" EXACT [] xref: NEXTPROT-FAMILY:04014 -is_a: FPLX:root -inverse_is_a: HGNC:TIAM1 -inverse_is_a: HGNC:TIAM2 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:11805 ! TIAM1 +relationship: inverse_is_a HGNC:11806 ! TIAM2 [Term] -id: FPLX:TIF_IB +id: FPLX:000471 name: TIF-IB synonym: "TIF-IB" EXACT [] xref: BEL:"TIF IB Complex" -is_a: FPLX:root -has_part: HGNC:TAF1A -has_part: HGNC:TAF1B -has_part: HGNC:TAF1C -has_part: HGNC:TBP +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:11532 ! TAF1A +relationship: has_part HGNC:11533 ! TAF1B +relationship: has_part HGNC:11534 ! TAF1C +relationship: has_part HGNC:11588 ! TBP [Term] -id: FPLX:TLR +id: FPLX:000472 name: TLR synonym: "TLR" EXACT [] xref: MEDSCAN:urn:agi-aopfc:0000296 xref: SIGNOR:SIGNOR-PF20 -is_a: FPLX:root -inverse_is_a: HGNC:TLR1 -inverse_is_a: HGNC:TLR2 -inverse_is_a: HGNC:TLR3 -inverse_is_a: HGNC:TLR4 -inverse_is_a: HGNC:TLR5 -inverse_is_a: HGNC:TLR6 -inverse_is_a: HGNC:TLR7 -inverse_is_a: HGNC:TLR8 -inverse_is_a: HGNC:TLR9 -inverse_is_a: HGNC:TLR10 - -[Term] -id: FPLX:TN +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:11847 ! TLR1 +relationship: inverse_is_a HGNC:11848 ! TLR2 +relationship: inverse_is_a HGNC:11849 ! TLR3 +relationship: inverse_is_a HGNC:11850 ! TLR4 +relationship: inverse_is_a HGNC:11851 ! TLR5 +relationship: inverse_is_a HGNC:16711 ! TLR6 +relationship: inverse_is_a HGNC:15631 ! TLR7 +relationship: inverse_is_a HGNC:15632 ! TLR8 +relationship: inverse_is_a HGNC:15633 ! TLR9 +relationship: inverse_is_a HGNC:15634 ! TLR10 + +[Term] +id: FPLX:000473 name: TN synonym: "Tenascin" EXACT [] synonym: "tenascin" EXACT [] @@ -7880,21 +7900,21 @@ xref: NCIT:C104676 xref: NEXTPROT-FAMILY:03964 xref: RE:R-HSA-2672035 xref: RE:R-HSA-2681744 -is_a: FPLX:root -inverse_is_a: HGNC:TNC -inverse_is_a: HGNC:TNN -inverse_is_a: HGNC:TNR -inverse_is_a: HGNC:TNXB +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:5318 ! TNC +relationship: inverse_is_a HGNC:22942 ! TNN +relationship: inverse_is_a HGNC:11953 ! TNR +relationship: inverse_is_a HGNC:11976 ! TNXB [Term] -id: FPLX:TNF +id: FPLX:000474 name: TNF xref: NEXTPROT-FAMILY:04243 xref: XFAM:PF00229 -is_a: FPLX:root +is_a: FPLX:000000 ! famplex [Term] -id: FPLX:TNFRSF +id: FPLX:000475 name: TNFRSF synonym: "TNF-R superfamily" EXACT [] synonym: "TNF-receptor family" EXACT [] @@ -7906,30 +7926,30 @@ synonym: "TNFR superfamily" EXACT [] synonym: "TNFR" EXACT [] xref: BEL:"TNFRSF Family" xref: MEDSCAN:urn:agi-aopfc:0000295 -is_a: FPLX:root -inverse_is_a: HGNC:TNFRSF1A -inverse_is_a: HGNC:TNFRSF1B -inverse_is_a: HGNC:TNFRSF4 -inverse_is_a: HGNC:TNFRSF8 -inverse_is_a: HGNC:TNFRSF9 -inverse_is_a: HGNC:TNFRSF10A -inverse_is_a: HGNC:TNFRSF10B -inverse_is_a: HGNC:TNFRSF10C -inverse_is_a: HGNC:TNFRSF10D -inverse_is_a: HGNC:TNFRSF11A -inverse_is_a: HGNC:TNFRSF11B -inverse_is_a: HGNC:TNFRSF12A -inverse_is_a: HGNC:TNFRSF13B -inverse_is_a: HGNC:TNFRSF13C -inverse_is_a: HGNC:TNFRSF14 -inverse_is_a: HGNC:TNFRSF17 -inverse_is_a: HGNC:TNFRSF18 -inverse_is_a: HGNC:TNFRSF19 -inverse_is_a: HGNC:TNFRSF21 -inverse_is_a: HGNC:TNFRSF25 - -[Term] -id: FPLX:TOP2 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:11916 ! TNFRSF1A +relationship: inverse_is_a HGNC:11917 ! TNFRSF1B +relationship: inverse_is_a HGNC:11918 ! TNFRSF4 +relationship: inverse_is_a HGNC:11923 ! TNFRSF8 +relationship: inverse_is_a HGNC:11924 ! TNFRSF9 +relationship: inverse_is_a HGNC:11904 ! TNFRSF10A +relationship: inverse_is_a HGNC:11905 ! TNFRSF10B +relationship: inverse_is_a HGNC:11906 ! TNFRSF10C +relationship: inverse_is_a HGNC:11907 ! TNFRSF10D +relationship: inverse_is_a HGNC:11908 ! TNFRSF11A +relationship: inverse_is_a HGNC:11909 ! TNFRSF11B +relationship: inverse_is_a HGNC:18152 ! TNFRSF12A +relationship: inverse_is_a HGNC:18153 ! TNFRSF13B +relationship: inverse_is_a HGNC:17755 ! TNFRSF13C +relationship: inverse_is_a HGNC:11912 ! TNFRSF14 +relationship: inverse_is_a HGNC:11913 ! TNFRSF17 +relationship: inverse_is_a HGNC:11914 ! TNFRSF18 +relationship: inverse_is_a HGNC:11915 ! TNFRSF19 +relationship: inverse_is_a HGNC:13469 ! TNFRSF21 +relationship: inverse_is_a HGNC:11910 ! TNFRSF25 + +[Term] +id: FPLX:000476 name: TOP2 synonym: "topoisomerase II" EXACT [] xref: BEL:"TOP2 Family" @@ -7947,12 +7967,12 @@ xref: IP:IPR024946 xref: IP:IPR031660 xref: IP:IPR034157 xref: NCIT:C18434 -is_a: FPLX:root -inverse_is_a: HGNC:TOP2A -inverse_is_a: HGNC:TOP2B +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:11989 ! TOP2A +relationship: inverse_is_a HGNC:11990 ! TOP2B [Term] -id: FPLX:Troponin +id: FPLX:000477 name: Troponin synonym: "troponin complex" EXACT [] synonym: "troponin" EXACT [] @@ -7961,13 +7981,13 @@ xref: GO:0005861 xref: MEDSCAN:urn:agi-complex:prophash-e4ec238e69c3d3292966ac97dbc11086 xref: RE:R-HSA-390583 xref: RE:R-HSA-390585 -is_a: FPLX:root -has_part: FPLX:Troponin_C -has_part: FPLX:Troponin_I -has_part: FPLX:Troponin_T +is_a: FPLX:000000 ! famplex +relationship: has_part FPLX:000478 ! Troponin_C +relationship: has_part FPLX:000479 ! Troponin_I +relationship: has_part FPLX:000480 ! Troponin_T [Term] -id: FPLX:Troponin_C +id: FPLX:000478 name: Troponin-C synonym: "cTnC" EXACT [] synonym: "cTnI" EXACT [] @@ -7976,24 +7996,24 @@ synonym: "TnC" EXACT [] synonym: "troponin C" EXACT [] xref: RE:R-HSA-390532 xref: RE:R-HSA-390587 -part_of: FPLX:Troponin -inverse_is_a: HGNC:TNNC1 -inverse_is_a: HGNC:TNNC2 +relationship: part_of FPLX:000477 ! Troponin +relationship: inverse_is_a HGNC:11943 ! TNNC1 +relationship: inverse_is_a HGNC:11944 ! TNNC2 [Term] -id: FPLX:Troponin_I +id: FPLX:000479 name: Troponin-I synonym: "TPNI" EXACT [] synonym: "troponin I" EXACT [] xref: NCIT:C17343 xref: RE:R-HSA-390541 -part_of: FPLX:Troponin -inverse_is_a: HGNC:TNNI1 -inverse_is_a: HGNC:TNNI2 -inverse_is_a: HGNC:TNNI3 +relationship: part_of FPLX:000477 ! Troponin +relationship: inverse_is_a HGNC:11945 ! TNNI1 +relationship: inverse_is_a HGNC:11946 ! TNNI2 +relationship: inverse_is_a HGNC:11947 ! TNNI3 [Term] -id: FPLX:Troponin_T +id: FPLX:000480 name: Troponin-T synonym: "cTnT" EXACT [] synonym: "TPNT" EXACT [] @@ -8001,13 +8021,13 @@ synonym: "troponin T" EXACT [] xref: IP:IPR027707 xref: NCIT:C38041 xref: RE:R-HSA-390546 -part_of: FPLX:Troponin -inverse_is_a: HGNC:TNNT1 -inverse_is_a: HGNC:TNNT2 -inverse_is_a: HGNC:TNNT3 +relationship: part_of FPLX:000477 ! Troponin +relationship: inverse_is_a HGNC:11948 ! TNNT1 +relationship: inverse_is_a HGNC:11949 ! TNNT2 +relationship: inverse_is_a HGNC:11950 ! TNNT3 [Term] -id: FPLX:Tryptase +id: FPLX:000481 name: Tryptase synonym: "Tryptase" EXACT [] synonym: "tryptase" EXACT [] @@ -8016,26 +8036,26 @@ xref: BEL:"Tryptase Family" xref: ECCODE:3.4.21.59 xref: NCIT:C120030 xref: NEXTPROT-FAMILY:02767 -is_a: FPLX:root -inverse_is_a: HGNC:TPSAB1 -inverse_is_a: HGNC:TPSB2 -inverse_is_a: HGNC:TPSD1 -inverse_is_a: HGNC:TPSG1 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:12019 ! TPSAB1 +relationship: inverse_is_a HGNC:14120 ! TPSB2 +relationship: inverse_is_a HGNC:14118 ! TPSD1 +relationship: inverse_is_a HGNC:14134 ! TPSG1 [Term] -id: FPLX:TSC +id: FPLX:000482 name: TSC synonym: "TSC" EXACT [] xref: RE:R-HSA-165175 xref: RE:R-HSA-165180 xref: RE:R-HSA-381855 xref: RE:R-HSA-5672337 -is_a: FPLX:root -inverse_is_a: HGNC:TSC1 -inverse_is_a: HGNC:TSC2 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:12362 ! TSC1 +relationship: inverse_is_a HGNC:12363 ! TSC2 [Term] -id: FPLX:TUBA +id: FPLX:000483 name: TUBA synonym: "alpha tubulin" EXACT [] synonym: "TUBA" EXACT [] @@ -8043,19 +8063,19 @@ synonym: "tubulin alpha chain" EXACT [] synonym: "tubulin α chain" EXACT [] synonym: "α tubulin" EXACT [] xref: BEL:"TUBA Family" -is_a: FPLX:Tubulin -inverse_is_a: HGNC:TUBA1A -inverse_is_a: HGNC:TUBA1B -inverse_is_a: HGNC:TUBA1C -inverse_is_a: HGNC:TUBA3C -inverse_is_a: HGNC:TUBA3D -inverse_is_a: HGNC:TUBA3E -inverse_is_a: HGNC:TUBA4A -inverse_is_a: HGNC:TUBA8 -inverse_is_a: HGNC:TUBAL3 - -[Term] -id: FPLX:TUBB +is_a: FPLX:000486 ! Tubulin +relationship: inverse_is_a HGNC:20766 ! TUBA1A +relationship: inverse_is_a HGNC:18809 ! TUBA1B +relationship: inverse_is_a HGNC:20768 ! TUBA1C +relationship: inverse_is_a HGNC:12408 ! TUBA3C +relationship: inverse_is_a HGNC:24071 ! TUBA3D +relationship: inverse_is_a HGNC:20765 ! TUBA3E +relationship: inverse_is_a HGNC:12407 ! TUBA4A +relationship: inverse_is_a HGNC:12410 ! TUBA8 +relationship: inverse_is_a HGNC:23534 ! TUBAL3 + +[Term] +id: FPLX:000484 name: TUBB synonym: "Beta Tubulin" EXACT [] synonym: "Beta tubulin" EXACT [] @@ -8073,18 +8093,18 @@ synonym: "tubulin β" EXACT [] xref: BEL:"TUBB Family" xref: IP:IPR002453 xref: NCIT:C129655 -is_a: FPLX:Tubulin -inverse_is_a: HGNC:TUBB -inverse_is_a: HGNC:TUBB1 -inverse_is_a: HGNC:TUBB2A -inverse_is_a: HGNC:TUBB2B -inverse_is_a: HGNC:TUBB3 -inverse_is_a: HGNC:TUBB4A -inverse_is_a: HGNC:TUBB4B -inverse_is_a: HGNC:TUBB6 - -[Term] -id: FPLX:TUBG +is_a: FPLX:000486 ! Tubulin +relationship: inverse_is_a HGNC:20778 ! TUBB +relationship: inverse_is_a HGNC:16257 ! TUBB1 +relationship: inverse_is_a HGNC:12412 ! TUBB2A +relationship: inverse_is_a HGNC:30829 ! TUBB2B +relationship: inverse_is_a HGNC:20772 ! TUBB3 +relationship: inverse_is_a HGNC:20774 ! TUBB4A +relationship: inverse_is_a HGNC:20771 ! TUBB4B +relationship: inverse_is_a HGNC:20776 ! TUBB6 + +[Term] +id: FPLX:000485 name: TUBG synonym: "Gamma tubulin" EXACT [] synonym: "gamma tubulin" EXACT [] @@ -8095,27 +8115,27 @@ synonym: "γ tubulin" EXACT [] synonym: "γ-tubulin" EXACT [] xref: GO:0000930 xref: IP:IPR002454 -is_a: FPLX:Tubulin -inverse_is_a: HGNC:TUBG1 -inverse_is_a: HGNC:TUBG2 +is_a: FPLX:000486 ! Tubulin +relationship: inverse_is_a HGNC:12417 ! TUBG1 +relationship: inverse_is_a HGNC:12419 ! TUBG2 [Term] -id: FPLX:Tubulin +id: FPLX:000486 name: Tubulin synonym: "tubulin" EXACT [] xref: MEDSCAN:urn:agi-complex:prophash-90a087d4e73b3992c65edfd9f71c6802 xref: MEDSCAN:urn:agi-protfc:tubulin xref: NCIT:C17219 xref: NEXTPROT-FAMILY:04239 -is_a: FPLX:root -inverse_is_a: FPLX:TUBA -inverse_is_a: FPLX:TUBB -inverse_is_a: FPLX:TUBG -inverse_is_a: HGNC:TUBD1 -inverse_is_a: HGNC:TUBE1 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a FPLX:000483 ! TUBA +relationship: inverse_is_a FPLX:000484 ! TUBB +relationship: inverse_is_a FPLX:000485 ! TUBG +relationship: inverse_is_a HGNC:16811 ! TUBD1 +relationship: inverse_is_a HGNC:20775 ! TUBE1 [Term] -id: FPLX:TXN +id: FPLX:000487 name: TXN synonym: "Thioredoxin" EXACT [] synonym: "thioredoxin" EXACT [] @@ -8123,24 +8143,24 @@ synonym: "thioredoxins" EXACT [] xref: BEL:"TXN Family" xref: MEDSCAN:urn:agi-protfc:thioredoxin xref: NEXTPROT-FAMILY:04000 -is_a: FPLX:root -inverse_is_a: HGNC:TXN -inverse_is_a: HGNC:TXN2 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:12435 ! TXN +relationship: inverse_is_a HGNC:17772 ! TXN2 [Term] -id: FPLX:TXNRD +id: FPLX:000488 name: TXNRD synonym: "Thioredoxin reductase" EXACT [] synonym: "thioredoxin reductase" EXACT [] xref: BEL:"TXNRD Family" xref: IP:IPR006338 -is_a: FPLX:root -inverse_is_a: HGNC:TXNRD1 -inverse_is_a: HGNC:TXNRD2 -inverse_is_a: HGNC:TXNRD3 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:12437 ! TXNRD1 +relationship: inverse_is_a HGNC:18155 ! TXNRD2 +relationship: inverse_is_a HGNC:20667 ! TXNRD3 [Term] -id: FPLX:UBE2 +id: FPLX:000489 name: UBE2 synonym: "E2 enzyme" EXACT [] synonym: "E2 ubiquitin-conjugating enzyme" EXACT [] @@ -8152,39 +8172,39 @@ xref: BEL:"UBE2 Family" xref: ECCODE:2.3.2.23 xref: GO:0019787 xref: NEXTPROT-FAMILY:04282 -is_a: FPLX:root -inverse_is_a: HGNC:CDC34 -inverse_is_a: HGNC:UBE2A -inverse_is_a: HGNC:UBE2B -inverse_is_a: HGNC:UBE2C -inverse_is_a: HGNC:UBE2D1 -inverse_is_a: HGNC:UBE2D2 -inverse_is_a: HGNC:UBE2D3 -inverse_is_a: HGNC:UBE2D4 -inverse_is_a: HGNC:UBE2E1 -inverse_is_a: HGNC:UBE2E2 -inverse_is_a: HGNC:UBE2E3 -inverse_is_a: HGNC:UBE2F -inverse_is_a: HGNC:UBE2G1 -inverse_is_a: HGNC:UBE2G2 -inverse_is_a: HGNC:UBE2H -inverse_is_a: HGNC:UBE2I -inverse_is_a: HGNC:UBE2J1 -inverse_is_a: HGNC:UBE2J2 -inverse_is_a: HGNC:UBE2L3 -inverse_is_a: HGNC:UBE2L6 -inverse_is_a: HGNC:UBE2M -inverse_is_a: HGNC:UBE2N -inverse_is_a: HGNC:UBE2NL -inverse_is_a: HGNC:UBE2Q1 -inverse_is_a: HGNC:UBE2R2 -inverse_is_a: HGNC:UBE2S -inverse_is_a: HGNC:UBE2V1 -inverse_is_a: HGNC:UBE2V2 -inverse_is_a: HGNC:UBE2W - -[Term] -id: FPLX:Ubiquitin +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:1734 ! CDC34 +relationship: inverse_is_a HGNC:12472 ! UBE2A +relationship: inverse_is_a HGNC:12473 ! UBE2B +relationship: inverse_is_a HGNC:15937 ! UBE2C +relationship: inverse_is_a HGNC:12474 ! UBE2D1 +relationship: inverse_is_a HGNC:12475 ! UBE2D2 +relationship: inverse_is_a HGNC:12476 ! UBE2D3 +relationship: inverse_is_a HGNC:21647 ! UBE2D4 +relationship: inverse_is_a HGNC:12477 ! UBE2E1 +relationship: inverse_is_a HGNC:12478 ! UBE2E2 +relationship: inverse_is_a HGNC:12479 ! UBE2E3 +relationship: inverse_is_a HGNC:12480 ! UBE2F +relationship: inverse_is_a HGNC:12482 ! UBE2G1 +relationship: inverse_is_a HGNC:12483 ! UBE2G2 +relationship: inverse_is_a HGNC:12484 ! UBE2H +relationship: inverse_is_a HGNC:12485 ! UBE2I +relationship: inverse_is_a HGNC:17598 ! UBE2J1 +relationship: inverse_is_a HGNC:19268 ! UBE2J2 +relationship: inverse_is_a HGNC:12488 ! UBE2L3 +relationship: inverse_is_a HGNC:12490 ! UBE2L6 +relationship: inverse_is_a HGNC:12491 ! UBE2M +relationship: inverse_is_a HGNC:12492 ! UBE2N +relationship: inverse_is_a HGNC:31710 ! UBE2NL +relationship: inverse_is_a HGNC:15698 ! UBE2Q1 +relationship: inverse_is_a HGNC:19907 ! UBE2R2 +relationship: inverse_is_a HGNC:17895 ! UBE2S +relationship: inverse_is_a HGNC:12494 ! UBE2V1 +relationship: inverse_is_a HGNC:12495 ! UBE2V2 +relationship: inverse_is_a HGNC:25616 ! UBE2W + +[Term] +id: FPLX:000490 name: Ubiquitin synonym: "Ub" EXACT [] synonym: "ub" EXACT [] @@ -8194,61 +8214,61 @@ xref: MEDSCAN:urn:agi-complex:prophash-50bd08479c3770278693a51fe379babd xref: MEDSCAN:urn:agi-protfc:ubiquitin xref: NCIT:C17227 xref: NEXTPROT-FAMILY:04276 -is_a: FPLX:root +is_a: FPLX:000000 ! famplex [Term] -id: FPLX:UGCG +id: FPLX:000491 name: UGCG -is_a: FPLX:Glycosyltransferase -inverse_is_a: HGNC:UGCG +is_a: FPLX:000198 ! Glycosyltransferase +relationship: inverse_is_a HGNC:12524 ! UGCG [Term] -id: FPLX:UGT +id: FPLX:000492 name: UGT synonym: "UGT" EXACT [] -is_a: FPLX:Glycosyltransferase -inverse_is_a: HGNC:UGT1A -inverse_is_a: HGNC:UGT1A1 -inverse_is_a: HGNC:UGT1A2P -inverse_is_a: HGNC:UGT1A3 -inverse_is_a: HGNC:UGT1A4 -inverse_is_a: HGNC:UGT1A5 -inverse_is_a: HGNC:UGT1A6 -inverse_is_a: HGNC:UGT1A7 -inverse_is_a: HGNC:UGT1A8 -inverse_is_a: HGNC:UGT1A9 -inverse_is_a: HGNC:UGT1A10 -inverse_is_a: HGNC:UGT1A11P -inverse_is_a: HGNC:UGT1A12P -inverse_is_a: HGNC:UGT1A13P -inverse_is_a: HGNC:UGT2A1 -inverse_is_a: HGNC:UGT2A2 -inverse_is_a: HGNC:UGT2A3 -inverse_is_a: HGNC:UGT2B4 -inverse_is_a: HGNC:UGT2B7 -inverse_is_a: HGNC:UGT2B10 -inverse_is_a: HGNC:UGT2B11 -inverse_is_a: HGNC:UGT2B15 -inverse_is_a: HGNC:UGT2B17 -inverse_is_a: HGNC:UGT2B24P -inverse_is_a: HGNC:UGT2B25P -inverse_is_a: HGNC:UGT2B26P -inverse_is_a: HGNC:UGT2B27P -inverse_is_a: HGNC:UGT2B28 -inverse_is_a: HGNC:UGT2B29P -inverse_is_a: HGNC:UGT3A1 -inverse_is_a: HGNC:UGT3A2 -inverse_is_a: HGNC:UGT8 - -[Term] -id: FPLX:UGGT +is_a: FPLX:000198 ! Glycosyltransferase +relationship: inverse_is_a HGNC:12529 ! UGT1A +relationship: inverse_is_a HGNC:12530 ! UGT1A1 +relationship: inverse_is_a HGNC:12534 ! UGT1A2P +relationship: inverse_is_a HGNC:12535 ! UGT1A3 +relationship: inverse_is_a HGNC:12536 ! UGT1A4 +relationship: inverse_is_a HGNC:12537 ! UGT1A5 +relationship: inverse_is_a HGNC:12538 ! UGT1A6 +relationship: inverse_is_a HGNC:12539 ! UGT1A7 +relationship: inverse_is_a HGNC:12540 ! UGT1A8 +relationship: inverse_is_a HGNC:12541 ! UGT1A9 +relationship: inverse_is_a HGNC:12531 ! UGT1A10 +relationship: inverse_is_a HGNC:12532 ! UGT1A11P +relationship: inverse_is_a HGNC:12533 ! UGT1A12P +relationship: inverse_is_a HGNC:32191 ! UGT1A13P +relationship: inverse_is_a HGNC:12542 ! UGT2A1 +relationship: inverse_is_a HGNC:28183 ! UGT2A2 +relationship: inverse_is_a HGNC:28528 ! UGT2A3 +relationship: inverse_is_a HGNC:12553 ! UGT2B4 +relationship: inverse_is_a HGNC:12554 ! UGT2B7 +relationship: inverse_is_a HGNC:12544 ! UGT2B10 +relationship: inverse_is_a HGNC:12545 ! UGT2B11 +relationship: inverse_is_a HGNC:12546 ! UGT2B15 +relationship: inverse_is_a HGNC:12547 ! UGT2B17 +relationship: inverse_is_a HGNC:12548 ! UGT2B24P +relationship: inverse_is_a HGNC:12549 ! UGT2B25P +relationship: inverse_is_a HGNC:12550 ! UGT2B26P +relationship: inverse_is_a HGNC:12551 ! UGT2B27P +relationship: inverse_is_a HGNC:13479 ! UGT2B28 +relationship: inverse_is_a HGNC:12552 ! UGT2B29P +relationship: inverse_is_a HGNC:26625 ! UGT3A1 +relationship: inverse_is_a HGNC:27266 ! UGT3A2 +relationship: inverse_is_a HGNC:12555 ! UGT8 + +[Term] +id: FPLX:000493 name: UGGT -is_a: FPLX:Glycosyltransferase -inverse_is_a: HGNC:UGGT1 -inverse_is_a: HGNC:UGGT2 +is_a: FPLX:000198 ! Glycosyltransferase +relationship: inverse_is_a HGNC:15663 ! UGGT1 +relationship: inverse_is_a HGNC:15664 ! UGGT2 [Term] -id: FPLX:VAV +id: FPLX:000494 name: VAV synonym: "VAV family" EXACT [] synonym: "Vav" EXACT [] @@ -8261,13 +8281,13 @@ xref: RE:R-HSA-442272 xref: RE:R-HSA-442295 xref: RE:R-HSA-5218789 xref: RE:R-HSA-5340329 -is_a: FPLX:root -inverse_is_a: HGNC:VAV1 -inverse_is_a: HGNC:VAV2 -inverse_is_a: HGNC:VAV3 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:12657 ! VAV1 +relationship: inverse_is_a HGNC:12658 ! VAV2 +relationship: inverse_is_a HGNC:12659 ! VAV3 [Term] -id: FPLX:VEGF +id: FPLX:000495 name: VEGF synonym: "vascular endothelial growth factor" EXACT [] synonym: "VEGF" EXACT [] @@ -8275,15 +8295,15 @@ xref: BEL:"VEGF Family" xref: NCIT:C129646 xref: RE:R-HSA-195361 xref: RE:R-HSA-195376 -is_a: FPLX:root -inverse_is_a: HGNC:VEGFA -inverse_is_a: HGNC:VEGFB -inverse_is_a: HGNC:VEGFC -inverse_is_a: HGNC:VEGFD -inverse_is_a: HGNC:PGF +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:12680 ! VEGFA +relationship: inverse_is_a HGNC:12681 ! VEGFB +relationship: inverse_is_a HGNC:12682 ! VEGFC +relationship: inverse_is_a HGNC:3708 ! VEGFD +relationship: inverse_is_a HGNC:8893 ! PGF [Term] -id: FPLX:VEGFR +id: FPLX:000496 name: VEGFR synonym: "VEGF receptor" EXACT [] synonym: "VEGF receptors" EXACT [] @@ -8293,13 +8313,13 @@ synonym: "VEGFRs" EXACT [] xref: BEL:"VEGFR Family" xref: GO:0005172 xref: NCIT:C17293 -is_a: FPLX:root -inverse_is_a: HGNC:FLT1 -inverse_is_a: HGNC:FLT4 -inverse_is_a: HGNC:KDR +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:3763 ! FLT1 +relationship: inverse_is_a HGNC:3767 ! FLT4 +relationship: inverse_is_a HGNC:6307 ! KDR [Term] -id: FPLX:Wnt +id: FPLX:000497 name: Wnt synonym: "WNT" EXACT [] synonym: "Wnt" EXACT [] @@ -8314,96 +8334,96 @@ xref: RE:R-HSA-3238374 xref: RE:R-HSA-3247790 xref: RE:R-HSA-3247824 xref: RE:R-HSA-3247835 -is_a: FPLX:root -inverse_is_a: HGNC:WNT1 -inverse_is_a: HGNC:WNT2 -inverse_is_a: HGNC:WNT2B -inverse_is_a: HGNC:WNT3 -inverse_is_a: HGNC:WNT3A -inverse_is_a: HGNC:WNT4 -inverse_is_a: HGNC:WNT5A -inverse_is_a: HGNC:WNT5B -inverse_is_a: HGNC:WNT6 -inverse_is_a: HGNC:WNT7A -inverse_is_a: HGNC:WNT7B -inverse_is_a: HGNC:WNT8A -inverse_is_a: HGNC:WNT8B -inverse_is_a: HGNC:WNT9A -inverse_is_a: HGNC:WNT9B -inverse_is_a: HGNC:WNT10A -inverse_is_a: HGNC:WNT10B -inverse_is_a: HGNC:WNT11 -inverse_is_a: HGNC:WNT16 - -[Term] -id: FPLX:YBX +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:12774 ! WNT1 +relationship: inverse_is_a HGNC:12780 ! WNT2 +relationship: inverse_is_a HGNC:12781 ! WNT2B +relationship: inverse_is_a HGNC:12782 ! WNT3 +relationship: inverse_is_a HGNC:15983 ! WNT3A +relationship: inverse_is_a HGNC:12783 ! WNT4 +relationship: inverse_is_a HGNC:12784 ! WNT5A +relationship: inverse_is_a HGNC:16265 ! WNT5B +relationship: inverse_is_a HGNC:12785 ! WNT6 +relationship: inverse_is_a HGNC:12786 ! WNT7A +relationship: inverse_is_a HGNC:12787 ! WNT7B +relationship: inverse_is_a HGNC:12788 ! WNT8A +relationship: inverse_is_a HGNC:12789 ! WNT8B +relationship: inverse_is_a HGNC:12778 ! WNT9A +relationship: inverse_is_a HGNC:12779 ! WNT9B +relationship: inverse_is_a HGNC:13829 ! WNT10A +relationship: inverse_is_a HGNC:12775 ! WNT10B +relationship: inverse_is_a HGNC:12776 ! WNT11 +relationship: inverse_is_a HGNC:16267 ! WNT16 + +[Term] +id: FPLX:000498 name: YBX synonym: "Y box binding protein" EXACT [] synonym: "Y-box-binding protein" EXACT [] synonym: "YBX protein family" EXACT [] -is_a: FPLX:root -inverse_is_a: HGNC:YBX1 -inverse_is_a: HGNC:YBX2 -inverse_is_a: HGNC:YBX3 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:8014 ! YBX1 +relationship: inverse_is_a HGNC:17948 ! YBX2 +relationship: inverse_is_a HGNC:2428 ! YBX3 [Term] -id: FPLX:ETC_complex_I_core +id: FPLX:000499 name: ETC-complex-I-core xref: HGNC_GROUP:1149 -part_of: FPLX:ETC_complex_I -has_part: HGNC:MT-ND1 -has_part: HGNC:MT-ND2 -has_part: HGNC:MT-ND3 -has_part: HGNC:MT-ND4 -has_part: HGNC:MT-ND4L -has_part: HGNC:MT-ND5 -has_part: HGNC:MT-ND6 -has_part: HGNC:NDUFS1 -has_part: HGNC:NDUFS2 -has_part: HGNC:NDUFS3 -has_part: HGNC:NDUFS7 -has_part: HGNC:NDUFS8 -has_part: HGNC:NDUFV1 -has_part: HGNC:NDUFV2 - -[Term] -id: FPLX:ETC_complex_I_supernumerary +relationship: part_of FPLX:000501 ! ETC_complex_I +relationship: has_part HGNC:7455 ! MT-ND1 +relationship: has_part HGNC:7456 ! MT-ND2 +relationship: has_part HGNC:7458 ! MT-ND3 +relationship: has_part HGNC:7459 ! MT-ND4 +relationship: has_part HGNC:7460 ! MT-ND4L +relationship: has_part HGNC:7461 ! MT-ND5 +relationship: has_part HGNC:7462 ! MT-ND6 +relationship: has_part HGNC:7707 ! NDUFS1 +relationship: has_part HGNC:7708 ! NDUFS2 +relationship: has_part HGNC:7710 ! NDUFS3 +relationship: has_part HGNC:7714 ! NDUFS7 +relationship: has_part HGNC:7715 ! NDUFS8 +relationship: has_part HGNC:7716 ! NDUFV1 +relationship: has_part HGNC:7717 ! NDUFV2 + +[Term] +id: FPLX:000500 name: ETC-complex-I-supernumerary xref: HGNC_GROUP:1150 -part_of: FPLX:ETC_complex_I -has_part: HGNC:NDUFAB1 -has_part: HGNC:NDUFA1 -has_part: HGNC:NDUFA2 -has_part: HGNC:NDUFA3 -has_part: HGNC:NDUFA5 -has_part: HGNC:NDUFA6 -has_part: HGNC:NDUFA7 -has_part: HGNC:NDUFA8 -has_part: HGNC:NDUFA9 -has_part: HGNC:NDUFA10 -has_part: HGNC:NDUFA11 -has_part: HGNC:NDUFA12 -has_part: HGNC:NDUFA13 -has_part: HGNC:NDUFB1 -has_part: HGNC:NDUFB2 -has_part: HGNC:NDUFB3 -has_part: HGNC:NDUFB4 -has_part: HGNC:NDUFB5 -has_part: HGNC:NDUFB6 -has_part: HGNC:NDUFB7 -has_part: HGNC:NDUFB8 -has_part: HGNC:NDUFB9 -has_part: HGNC:NDUFB10 -has_part: HGNC:NDUFB11 -has_part: HGNC:NDUFC1 -has_part: HGNC:NDUFC2 -has_part: HGNC:NDUFS4 -has_part: HGNC:NDUFS5 -has_part: HGNC:NDUFS6 -has_part: HGNC:NDUFV3 - -[Term] -id: FPLX:ETC_complex_I +relationship: part_of FPLX:000501 ! ETC_complex_I +relationship: has_part HGNC:7694 ! NDUFAB1 +relationship: has_part HGNC:7683 ! NDUFA1 +relationship: has_part HGNC:7685 ! NDUFA2 +relationship: has_part HGNC:7686 ! NDUFA3 +relationship: has_part HGNC:7688 ! NDUFA5 +relationship: has_part HGNC:7690 ! NDUFA6 +relationship: has_part HGNC:7691 ! NDUFA7 +relationship: has_part HGNC:7692 ! NDUFA8 +relationship: has_part HGNC:7693 ! NDUFA9 +relationship: has_part HGNC:7684 ! NDUFA10 +relationship: has_part HGNC:20371 ! NDUFA11 +relationship: has_part HGNC:23987 ! NDUFA12 +relationship: has_part HGNC:17194 ! NDUFA13 +relationship: has_part HGNC:7695 ! NDUFB1 +relationship: has_part HGNC:7697 ! NDUFB2 +relationship: has_part HGNC:7698 ! NDUFB3 +relationship: has_part HGNC:7699 ! NDUFB4 +relationship: has_part HGNC:7700 ! NDUFB5 +relationship: has_part HGNC:7701 ! NDUFB6 +relationship: has_part HGNC:7702 ! NDUFB7 +relationship: has_part HGNC:7703 ! NDUFB8 +relationship: has_part HGNC:7704 ! NDUFB9 +relationship: has_part HGNC:7696 ! NDUFB10 +relationship: has_part HGNC:20372 ! NDUFB11 +relationship: has_part HGNC:7705 ! NDUFC1 +relationship: has_part HGNC:7706 ! NDUFC2 +relationship: has_part HGNC:7711 ! NDUFS4 +relationship: has_part HGNC:7712 ! NDUFS5 +relationship: has_part HGNC:7713 ! NDUFS6 +relationship: has_part HGNC:7719 ! NDUFV3 + +[Term] +id: FPLX:000501 name: ETC-complex-I xref: COMPLEXPORTAL:CPX-577 xref: ECCODE:1.6.5.3 @@ -8411,12 +8431,12 @@ xref: GO:0005747 xref: HGNC_GROUP:640 xref: MESH:D042967 xref: NCIT:C118184 -is_a: FPLX:root -has_part: FPLX:ETC_complex_I_core -has_part: FPLX:ETC_complex_I_supernumerary +is_a: FPLX:000000 ! famplex +relationship: has_part FPLX:000499 ! ETC_complex_I_core +relationship: has_part FPLX:000500 ! ETC_complex_I_supernumerary [Term] -id: FPLX:ETC_complex_II +id: FPLX:000502 name: ETC-complex-II synonym: "complex II" EXACT [] synonym: "succinate dehydrogenase (ubiquinone)" EXACT [] @@ -8430,14 +8450,14 @@ xref: MESH:D042963 xref: NCIT:C112049 xref: RE:R-HSA-165631 xref: RE:R-HSA-70990 -is_a: FPLX:root -has_part: HGNC:SDHA -has_part: HGNC:SDHB -has_part: HGNC:SDHC -has_part: HGNC:SDHD +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:10680 ! SDHA +relationship: has_part HGNC:10681 ! SDHB +relationship: has_part HGNC:10682 ! SDHC +relationship: has_part HGNC:10683 ! SDHD [Term] -id: FPLX:ETC_complex_III +id: FPLX:000503 name: ETC-complex-III synonym: "complex III" EXACT [] synonym: "cytochrome bc1 complex" EXACT [] @@ -8448,57 +8468,53 @@ xref: GO:0005750 xref: GO:0045275 xref: HGNC_GROUP:642 xref: MESH:D014450 -is_a: FPLX:root -has_part: HGNC:CYC1 -has_part: HGNC:MT-CYB -has_part: HGNC:UQCRB -has_part: HGNC:UQCRC1 -has_part: HGNC:UQCRC2 -has_part: HGNC:UQCRFS1 -has_part: HGNC:UQCRH -has_part: HGNC:UQCRQ -has_part: HGNC:UQCR10 -has_part: HGNC:UQCR11 - -[Term] -id: FPLX:ETC_complex_IV +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:2579 ! CYC1 +relationship: has_part HGNC:7427 ! MT-CYB +relationship: has_part HGNC:12582 ! UQCRB +relationship: has_part HGNC:12585 ! UQCRC1 +relationship: has_part HGNC:12586 ! UQCRC2 +relationship: has_part HGNC:12587 ! UQCRFS1 +relationship: has_part HGNC:12590 ! UQCRH +relationship: has_part HGNC:29594 ! UQCRQ +relationship: has_part HGNC:30863 ! UQCR10 +relationship: has_part HGNC:30862 ! UQCR11 + +[Term] +id: FPLX:000504 name: ETC-complex-IV xref: ECCODE:1.9.3.1 xref: GO:0005751 xref: HGNC_GROUP:643 xref: MESH:D003576 xref: NCIT:C26034 -is_a: FPLX:root -has_part: HGNC:COX4I1 -has_part: HGNC:COX4I2 -has_part: HGNC:COX5A -has_part: HGNC:COX5B -has_part: HGNC:COX6A1 -has_part: HGNC:COX6A2 -has_part: HGNC:COX6B1 -has_part: HGNC:COX6B2 -has_part: HGNC:COX6C -has_part: HGNC:COX7A1 -has_part: HGNC:COX7A2 -has_part: HGNC:COX7B -has_part: HGNC:COX7B2 -has_part: HGNC:COX7C -has_part: HGNC:COX8A -has_part: HGNC:COX8C -has_part: HGNC:MT-CO1 -has_part: HGNC:MT-CO2 -has_part: HGNC:MT-CO3 - -[Term] -id: FPLX:ETC_complex_V +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:2265 ! COX4I1 +relationship: has_part HGNC:16232 ! COX4I2 +relationship: has_part HGNC:2267 ! COX5A +relationship: has_part HGNC:2269 ! COX5B +relationship: has_part HGNC:2277 ! COX6A1 +relationship: has_part HGNC:2279 ! COX6A2 +relationship: has_part HGNC:2280 ! COX6B1 +relationship: has_part HGNC:24380 ! COX6B2 +relationship: has_part HGNC:2285 ! COX6C +relationship: has_part HGNC:2287 ! COX7A1 +relationship: has_part HGNC:2288 ! COX7A2 +relationship: has_part HGNC:2291 ! COX7B +relationship: has_part HGNC:24381 ! COX7B2 +relationship: has_part HGNC:2292 ! COX7C +relationship: has_part HGNC:2294 ! COX8A +relationship: has_part HGNC:24382 ! COX8C +relationship: has_part HGNC:7419 ! MT-CO1 +relationship: has_part HGNC:7421 ! MT-CO2 +relationship: has_part HGNC:7422 ! MT-CO3 + +[Term] +id: FPLX:000505 name: ETC-complex-V xref: ECCODE:3.6.3.14 xref: GO:0005753 xref: HGNC_GROUP:644 xref: MESH:D025261 -is_a: FPLX:root - -[Term] -id: FPLX:root -name: PROTEIN-FAMILY-OR-COMPLEX +is_a: FPLX:000000 ! famplex diff --git a/export/hgnc_ids.py b/export/hgnc_ids.py deleted file mode 100644 index b5c46dd34..000000000 --- a/export/hgnc_ids.py +++ /dev/null @@ -1,47 +0,0 @@ -"""Several files in this resource use HGNC gene symbols to identify individual -genes. However, the symbols assigned to HGNC IDs can change over time, and -therefore previously curated symbols can become invalid. This script -generates a mapping of current (i.e. at the time of running the script) -mappings of HGNC IDs to symbols so that the assumptions about the identity -of the genes in the various tables can be traced.""" - -import os -import csv -from indra.databases import hgnc_client - -if __name__ == '__main__': - path_this = os.path.dirname(os.path.abspath(__file__)) - hgnc_symbols = set() - # Gather all HGNC symbols from relations.csv - relations_file = os.path.join(path_this, os.pardir, 'relations.csv') - with open(relations_file, 'r') as f: - csvreader = csv.reader(f, delimiter=str(u','), lineterminator='\r\n', - quoting=csv.QUOTE_MINIMAL, - quotechar=str(u'"')) - for row in csvreader: - ns1, id1, rel, ns2, id2 = row - if ns1 == 'HGNC': - hgnc_symbols.add(id1) - if ns2 == 'HGNC': - hgnc_symbols.add(id2) - - # Gather all HGNC symbols from grounding_map.csv - gm_file = os.path.join(path_this, os.pardir, 'grounding_map.csv') - with open(gm_file, 'r') as f: - csvreader = csv.reader(f, delimiter=str(u','), lineterminator='\r\n', - quoting=csv.QUOTE_MINIMAL, - quotechar=str(u'"')) - for row in csvreader: - namespaces = row[1::2] - ids = row[2::2] - for ns, id in zip(namespaces, ids): - if ns == 'HGNC': - hgnc_symbols.add(id) - - # Create output file - out_file = os.path.join(path_this, 'hgnc_symbol_map.csv') - with open(out_file, 'w') as fh: - for hgnc_symbol in sorted(list(hgnc_symbols)): - hgnc_id = hgnc_client.get_hgnc_id(hgnc_symbol) - fh.write('%s,%s\r\n' % (hgnc_symbol, hgnc_id)) - diff --git a/export/obo.py b/export/obo.py deleted file mode 100644 index 66f2da58e..000000000 --- a/export/obo.py +++ /dev/null @@ -1,153 +0,0 @@ -import os -import csv -import sys -import datetime -import collections - - -if sys.version_info.major < 3: - raise Exception('This script should be run in Python 3.') - - -Reference = collections.namedtuple('Reference', ['ns', 'id']) -Synonym = collections.namedtuple('Synonym', ['name', 'status']) - - -class OboTerm(object): - def __init__(self, term_id, name, rels, synonyms=None, xrefs=None): - self.term_id = term_id - self.name = name - self.synonyms = synonyms - if xrefs is not None: - self.xrefs = xrefs - else: - self.xrefs = [] - self.rels = rels - - def to_obo(self): - obo_str = '[Term]\n' - obo_str += 'id: %s:%s\n' % (self.term_id.ns, self.term_id.id) - obo_str += 'name: %s\n' % self.name - for synonym in self.synonyms: - obo_str += 'synonym: "%s" %s []\n' % (synonym.name, synonym.status) - for xref in self.xrefs: - if xref.ns == 'BEL': - entry = 'BEL:"%s"' % xref.id - elif xref.ns == 'NXP': - entry = 'NEXTPROT-FAMILY:%s' % xref.id[3:] - elif xref.ns == 'PF': - entry = 'XFAM:%s' % xref.id - elif xref.ns == 'GO': - entry = xref.id - else: - entry = '%s:%s' % (xref.ns, xref.id) - obo_str += 'xref: %s\n' % entry - for rel_type, rel_entries in self.rels.items(): - for ref in rel_entries: - obo_str += '%s: %s:%s\n' % (rel_type, ref.ns, ref.id) - return obo_str - - def __str__(self): - return self.to_obo() - - -def get_obo_terms(): - obo_terms = [] - path_this = os.path.dirname(os.path.abspath(__file__)) - entities_file = os.path.join(path_this, os.pardir, 'entities.csv') - grounding_file = os.path.join(path_this, os.pardir, 'grounding_map.csv') - equiv_file = os.path.join(path_this, os.pardir, 'equivalences.csv') - rel_file = os.path.join(path_this, os.pardir, 'relations.csv') - with open(entities_file, 'r') as fh: - entities = [l.strip() for l in fh.readlines()] - with open(equiv_file, 'r') as fh: - csvreader = csv.reader(fh, delimiter=str(u','), lineterminator='\r\n', - quoting=csv.QUOTE_MINIMAL, - quotechar=str(u'"')) - equivalences = collections.defaultdict(list) - for row in csvreader: - source_ns, source_id, fplx_id = row - equivalences[fplx_id].append((source_ns, source_id)) - with open(grounding_file) as fh: - csvreader = csv.reader(fh, delimiter=str(u','), lineterminator='\r\n', - quoting=csv.QUOTE_MINIMAL, - quotechar=str(u'"')) - textrefs = collections.defaultdict(list) - for row in csvreader: - text_str = row[0] - namespaces = row[1::2] - ids = row[2::2] - for ns, id in zip(namespaces, ids): - if ns == 'FPLX': - textrefs[id].append(text_str) - with open(rel_file) as fh: - rels = {entity: collections.OrderedDict(is_a=[], - part_of=[], - inverse_is_a=[], - has_part=[]) - for entity in entities} - csvreader = csv.reader(fh, delimiter=str(u','), lineterminator='\r\n', - quoting=csv.QUOTE_MINIMAL, - quotechar=str(u'"')) - for row in csvreader: - ns1, id1, rel, ns2, id2 = row - if ns1 == 'FPLX': - if rel == 'isa': - rels[id1]['is_a'].append(Reference(ns2, id2)) - elif rel == 'partof': - rels[id1]['part_of'].append(Reference(ns2, id2)) - if ns2 == 'FPLX': - if rel == 'isa': - rels[id2]['inverse_is_a'].append(Reference(ns1, id1)) - elif rel == 'partof': - rels[id2]['has_part'].append(Reference(ns1, id1)) - - # For each entity in famplex - for entity in entities: - entity_id = Reference('FPLX', entity) - # Construct string name - name = entity.replace('_', '-') - # Get synonyms - refs = textrefs.get(entity) - synonyms = [] - if refs: - for textref in refs: - synonyms.append(Synonym(textref, 'EXACT')) - # Get xrefs - equivs = equivalences.get(entity) - xrefs = [] - if equivs: - for equiv in equivs: - xrefs.append(Reference(equiv[0], equiv[1])) - # If the entity has no isa relations, connect it to the root - if not rels[entity]['is_a'] and not rels[entity]['part_of']: - rels[entity]['is_a'].append(Reference('FPLX', 'root')) - term = OboTerm(entity_id, name, rels[entity], synonyms, xrefs) - obo_terms.append(term) - obo_terms.append(OboTerm(Reference('FPLX', 'root'), - 'PROTEIN-FAMILY-OR-COMPLEX', - {}, [], {})) - return obo_terms - - -def save_obo_terms(obo_terms, output_file=None): - date = datetime.datetime.today() - date_str = date.strftime('%d:%m:%Y %H:%M') - path_this = os.path.dirname(os.path.abspath(__file__)) - if not output_file: - output_file = os.path.join(path_this, os.pardir, 'famplex.obo') - with open(output_file, 'wt') as fh: - fh.write('format-version: 1.2\n') - fh.write('date: %s\n' % date_str) - fh.write('\n') - for term in obo_terms: - obo_str = term.to_obo() - fh.write(obo_str) - fh.write('\n') - - -if __name__ == '__main__': - obo_terms = get_obo_terms() - path_this = os.path.dirname(os.path.abspath(__file__)) - save_obo_terms(obo_terms, os.path.join(path_this, 'famplex.obo')) - diff --git a/export/relations_graph.pdf b/export/relations_graph.pdf new file mode 100644 index 000000000..ba6c4e66b Binary files /dev/null and b/export/relations_graph.pdf differ diff --git a/export/relations_graph.py b/export/relations_graph.py deleted file mode 100644 index 2c3797322..000000000 --- a/export/relations_graph.py +++ /dev/null @@ -1,43 +0,0 @@ -from __future__ import print_function, unicode_literals -import os -import csv -import pygraphviz as pgv - - -if __name__ == '__main__': - path_this = os.path.dirname(os.path.abspath(__file__)) - relations_file = os.path.join(path_this, os.pardir, 'relations.csv') - output_file = os.path.join(path_this, os.pardir, 'relations.pdf') - rows = [] - - graph = pgv.AGraph(name='relations', directed=True, rankdir='LR') - hgnc_style = {'color': 'lightgray', 'style': 'filled', - 'fontname': 'arial'} - be_style = {'color': 'pink', 'style': 'filled', - 'fontname': 'arial'} - edge_style = {'fontname': 'arial'} - - with open(relations_file) as f: - csvreader = csv.reader(f, delimiter=str(u','), lineterminator='\r\n', - quoting=csv.QUOTE_MINIMAL, - quotechar=str(u'"')) - nodes = set([]) - isa_edges = set([]) - partof_edges = set([]) - for row in csvreader: - ns1, id1, rel, ns2, id2 = row - def node_label(ns, id): - return '%s:%s' % (ns, id) - for ns, id in ((ns1, id1), (ns2, id2)): - if ns == 'HGNC': - graph.add_node(node_label(ns, id), **hgnc_style) - elif ns == 'FPLX': - graph.add_node(node_label(ns, id), **be_style) - edge = (node_label(ns1, id1), node_label(ns2, id2)) - if rel == 'isa': - graph.add_edge(edge, label='isa', **edge_style) - elif rel == 'partof': - graph.add_edge(edge, label='partof', **edge_style) - - graph.draw(output_file, prog='dot') - diff --git a/famplex/__init__.py b/famplex/__init__.py new file mode 100644 index 000000000..aae4d554e --- /dev/null +++ b/famplex/__init__.py @@ -0,0 +1,3 @@ +# -*- coding: utf-8 -*- + +"""FamPlex Python package.""" diff --git a/famplex/check_references.py b/famplex/check_references.py new file mode 100644 index 000000000..e8b95947a --- /dev/null +++ b/famplex/check_references.py @@ -0,0 +1,311 @@ +# -*- coding: utf-8 -*- + +"""Check the validity and integrity of the FamPlex resources.""" + +import csv +import sys +from collections import Counter, defaultdict + +from famplex.constants import ENTITIES_PATH, EQUIVALENCES_PATH, GROUNDING_MAP_PATH, RELATIONS_PATH + + +def load_csv(path): + """Load the rows of a TSV file.""" + with open(path) as fh: + reader = csv.reader( + fh, + delimiter=',', + lineterminator='\r\n', + quoting=csv.QUOTE_MINIMAL, + quotechar='"', + ) + return tuple(tuple(row) for row in reader) + + +def load_grounding_map(filename): + gm_rows = load_csv(filename) + check_rows(gm_rows, 4, filename) + g_map = defaultdict(dict) + e_map = defaultdict(list) + for text, db, db_id, db_name in gm_rows: + g_map[text][db] = db_id + e_map[text, db].append((db_id, db_name)) + return g_map, gm_rows, e_map + + +def check_file_rows(filename, row_length): + rows = load_csv(filename) + check_rows(rows, row_length, filename) + + +def check_rows(rows, row_length, filename): + for ix, row in enumerate(rows, start=1): + if len(row) != row_length: + print("ERROR: Line %d in file %s has %d columns, should be %d" % + (ix, filename, len(row), row_length)) + + +def load_entity_list(filename): + rows = load_csv(filename) + check_rows(rows, 4, filename) + return rows + + +def load_relationships(filename): + rows = load_csv(filename) + check_rows(rows, 7, filename) + return [ + ((sns, sid, sname), rel, (ons, oid, oname)) + for sns, sid, sname, rel, ons, oid, oname in rows + ] + + +def load_equivalences(filename): + rows = load_csv(filename) + check_rows(rows, 4, filename) + return rows + + +def update_id_prefixes(filename): + gm_rows = load_csv(filename) + updated_rows = [] + for row in gm_rows: + key = row[0] + keys = [entry for entry in row[1::2]] + values = [entry for entry in row[2::2]] + if 'GO' in keys: + go_ix = keys.index('GO') + values[go_ix] = 'GO:%s' % values[go_ix] + if 'CHEBI' in keys: + chebi_ix = keys.index('CHEBI') + values[chebi_ix] = 'CHEBI:%s' % values[chebi_ix] + if 'CHEMBL' in keys: + chembl_ix = keys.index('CHEMBL') + values[chembl_ix] = 'CHEMBL%s' % values[chembl_ix] + updated_row = [key] + for pair in zip(keys, values): + updated_row += pair + updated_rows.append(updated_row) + return updated_rows + + +def pubchem_and_chebi(db_refs): + pubchem_id = db_refs.get('PUBCHEM') + chebi_id = db_refs.get('CHEBI') + if pubchem_id and not chebi_id: + return 'chebi_missing' + if chebi_id and not pubchem_id: + return 'pubchem_missing' + return None + + +def check_duplicates(entries, entry_label): + ent_counter = Counter(entries) + print("-- Checking for duplicate %s --" % entry_label) + found_duplicates = False + for ent, freq in ent_counter.items(): + if freq > 1: + print("ERROR: Duplicate %s in %s." % (str(ent), entry_label)) + found_duplicates = True + print() + return found_duplicates + + +def main(): + signal_error = False + entities = load_entity_list(ENTITIES_PATH) + relationships = load_relationships(RELATIONS_PATH) + equivalences = load_equivalences(EQUIVALENCES_PATH) + gm, gm_tuples, entity_to_texts = load_grounding_map(GROUNDING_MAP_PATH) + + famplex_id_to_name = { + fplx_id: fplx_name + for fplx_id, fplx_name, *_ in entities + } + + for entries, entry_label in ((entities, 'entities'), + (relationships, 'relationships'), + (equivalences, 'equivalences'), + (gm_tuples, 'groundings')): + if check_duplicates(entries, entry_label): + signal_error = True + + print("-- Checking for doubly grounded text in grounding map --") + for (text, db), db_ids in entity_to_texts.items(): + if len(db_ids) > 1: + db_ids = [ + f'{db}:{db_id} ! {db_name}' + for db_id, db_name in db_ids + ] + print(f'WARNING "{text}" has multiple {db} groundings: {", ".join(db_ids)}') + + print("\n-- Checking for undeclared FamPlex IDs in grounding map --") + # Look through grounding map and find all instances with an FPLX db key + entities_missing_gm = [] + for text, db_refs in gm.items(): + for db_key, db_id in db_refs.items(): + if db_key == 'FPLX' and db_id not in famplex_id_to_name: + entities_missing_gm.append(db_id) + print("ERROR: ID %s referenced in grounding map " + "is not in entities list." % db_id) + signal_error = True + + print("\n-- Checking for CHEBI/PUBCHEM IDs--") + chebi_id_missing = [] + pubchem_id_missing = [] + for text, db_refs in gm.items(): + if db_refs is not None: + p_and_c = pubchem_and_chebi(db_refs) + if p_and_c == 'chebi_missing': + chebi_id_missing.append(db_refs['PUBCHEM']) + print("WARNING: %s has PubChem ID (%s) but no CHEBI ID." + % (text, db_refs['PUBCHEM'])) + if p_and_c == 'pubchem_missing': + pubchem_id_missing.append(db_refs['CHEBI']) + print("WARNING: %s has ChEBI ID (%s) but no PUBCHEM ID." % + (text, db_refs['CHEBI'])) + + print("\n-- Checking for undeclared FamPlex IDs in relationships file --") + # Load the relationships + # Check the relationships for consistency with entities + entities_missing_rel = [] + for subj, rel, obj in relationships: + for term_ns, term_id, term_name in (subj, obj): + if term_ns == 'FPLX' and term_id not in famplex_id_to_name: + entities_missing_rel.append(term_id) + print("ERROR: ID %s referenced in relations " + "is not in entities list." % term_id) + signal_error = True + + print("\n-- Checking for valid namespaces in relations --") + for ix, (subj, rel, obj) in enumerate(relationships, start=1): + for term_ns, term_id, term_name in (subj, obj): + if term_ns not in ('FPLX', 'HGNC', 'UP'): + print("ERROR: row %d: Invalid namespace in relations.csv: %s" % + (ix, term_ns)) + signal_error = True + + # This check requires the indra package + try: + from indra.databases import hgnc_client + except ImportError as e: + print('\nHGNC check could not be performed because of import error') + print(e) + signal_error = True + else: + print("\n-- Checking for invalid HGNC IDs in relationships file --") + for subj, rel, obj in relationships: + for term_ns, term_id, term_name in (subj, obj): + if term_ns == 'HGNC': + lu_term_name = hgnc_client.get_hgnc_name(term_id) + if not lu_term_name: + print("ERROR: ID %s referenced in relations is " + "not a valid HGNC ID." % term_id) + signal_error = True + if term_name != lu_term_name: + print("ERROR: HGNC %s symbol out of sync." + "%s should be %s" % term_id, term_name, lu_term_name) + signal_error = True + + # This check requires the indra package + try: + from indra.databases import hgnc_client + except ImportError as e: + print('\nHGNC check could not be performed because of import error') + print(e) + signal_error = True + else: + print("\n-- Checking for invalid HGNC IDs in grounding map --") + for text, db_refs in gm.items(): + if db_refs is not None: + for db_key, db_id in db_refs.items(): + if db_key == 'HGNC': + lu_term_name = hgnc_client.get_hgnc_name(db_id) + if not lu_term_name: + print("ERROR: ID %s in grounding map is " + "not a valid HGNC ID." % db_id) + signal_error = True + + # This check requires a ChEBI resource file to be available. You + # can obtain it from here: ftp://ftp.ebi.ac.uk/pub/databases/ + # chebi/Flat_file_tab_delimited/compounds.tsv.gz + try: + with open('chebi_compounds.tsv', 'rt') as fh: + chebi_ids = [lin.split('\t')[2] for lin in fh.readlines()] + except IOError: + print('\n ChEBI ID check could not be performed because of IO error') + print(e) + else: + print("\n-- Checking for invalid ChEBI IDs in grounding map --") + for text, db_refs in gm.items(): + if db_refs is None: + continue + for db_key, db_id in db_refs.items(): + if db_key != 'CHEBI': + continue + if db_id not in chebi_ids: + print("ERROR: ID %s in grounding map is " + "not a valid CHEBI ID." % db_id) + + print("\n-- Checking for FamPlexes whose relationships are undefined --") + # Check the relationships for consistency with entities + for ent in famplex_id_to_name: + found = any( + (s_ns == 'FPLX' and s_id == ent or o_ns == 'FPLX' and o_id == ent) + for (s_ns, s_id, _), rel, (o_ns, o_id, _) in relationships + ) + if not found: + print("WARNING: ID %s has no known relations." % ent) + + print("\n-- Checking for non-existent FamPlexes in equivalences --") + entities_missing_eq = [] + for eq_ns, eq_id, fplx_id, _ in equivalences: + if fplx_id not in famplex_id_to_name: + signal_error = True + entities_missing_eq.append(fplx_id) + print("ERROR: ID %s referenced in equivalences " + "is not in entities list." % fplx_id) + + print("\n-- Checking for duplicate equivalences --") + equiv_counter = Counter(equivalences) + duplicate_eq = [ + item + for item, count in equiv_counter.items() + if count > 1 + ] + if duplicate_eq: + print("ERROR: Duplicate equivalences found:") + for dup in duplicate_eq: + print(dup) + + # This check requires the requests package to be installed + try: + import requests + import logging + from tqdm import tqdm + except ImportError: + pass + else: + logging.getLogger('requests').setLevel(logging.CRITICAL) + logging.getLogger('urllib3').setLevel(logging.CRITICAL) + print("\n-- Checking for invalid PUBCHEM CIDs in grounding map --") + pubchem_url = 'https://pubchem.ncbi.nlm.nih.gov/rest/pug/compound/' + \ + 'cid/%s/description/XML' + + pubchem_ids = { + db_id + for text, db_refs in gm.items() + for db_key, db_id in db_refs.items() + if db_key == 'PUBCHEM' + } + for db_id in tqdm(pubchem_ids): + res = requests.get(pubchem_url % db_id) + if res.status_code != 200: + print("ERROR: ID %s in grounding map is " + "not a valid PUBCHEM ID." % db_id) + + sys.exit(1 if signal_error else 0) + + +if __name__ == '__main__': + main() diff --git a/famplex/constants.py b/famplex/constants.py new file mode 100644 index 000000000..50a007d44 --- /dev/null +++ b/famplex/constants.py @@ -0,0 +1,16 @@ +# -*- coding: utf-8 -*- + +"""Constants for the FamPlex Python package.""" + +import os + +HERE = os.path.abspath(os.path.dirname(__file__)) + +RESOURCES = os.path.join(HERE, 'resources') +ENTITIES_PATH = os.path.join(RESOURCES, 'entities.csv') +EQUIVALENCES_PATH = os.path.join(RESOURCES, 'equivalences.csv') +GROUNDING_MAP_PATH = os.path.join(RESOURCES, 'grounding_map.csv') +RELATIONS_PATH = os.path.join(RESOURCES, 'relations.csv') +METADATA_PATH = os.path.join(RESOURCES, 'metadata.json') + +EXPORT_DIR = os.path.abspath(os.path.join(HERE, os.pardir, 'export')) diff --git a/famplex/export/__init__.py b/famplex/export/__init__.py new file mode 100644 index 000000000..44ad38158 --- /dev/null +++ b/famplex/export/__init__.py @@ -0,0 +1,3 @@ +# -*- coding: utf-8 -*- + +"""Export scripts for FamPlex.""" diff --git a/famplex/export/__main__.py b/famplex/export/__main__.py new file mode 100644 index 000000000..fec3eea57 --- /dev/null +++ b/famplex/export/__main__.py @@ -0,0 +1,8 @@ +# -*- coding: utf-8 -*- + +"""A command line interface for FamPlex exporters.""" + +from famplex.export.cli import main + +if __name__ == '__main__': + main() diff --git a/famplex/export/cli.py b/famplex/export/cli.py new file mode 100644 index 000000000..4b557b7c8 --- /dev/null +++ b/famplex/export/cli.py @@ -0,0 +1,22 @@ +# -*- coding: utf-8 -*- + +"""A command line interface for FamPlex exporters.""" + +import famplex.export.export_belns +import famplex.export.export_obo +import famplex.export.export_relations_graph + +__all__ = [ + 'main', +] + + +def main() -> None: + """Export FamPlex to all file types.""" + famplex.export.export_belns.main() + famplex.export.export_obo.main() + famplex.export.export_relations_graph.main() + + +if __name__ == '__main__': + main() diff --git a/export/belns.py b/famplex/export/export_belns.py similarity index 59% rename from export/belns.py rename to famplex/export/export_belns.py index 0272f4074..b2f970b88 100644 --- a/export/belns.py +++ b/famplex/export/export_belns.py @@ -1,24 +1,34 @@ -#! /usr/bin/env python3 # -*- coding: utf-8 -*- -"""Output FamPlex as a BEL namespace. Requires the `bel_resources` package.""" +"""Output FamPlex as a BEL namespace using the :mod:`bel_resources` package.""" +import csv import os from bel_resources import write_namespace from bel_resources.constants import NAMESPACE_DOMAIN_GENE -path_this = os.path.dirname(os.path.abspath(__file__)) -entities_file = os.path.join(path_this, os.pardir, 'entities.csv') -output_file = os.path.join(path_this, 'famplex.belns') +from famplex.constants import ENTITIES_PATH, EXPORT_DIR + +DEFAULT_BELNS_PATH = os.path.join(EXPORT_DIR, 'famplex.belns') def _get_entities(): - with open(entities_file, 'r') as fh: - return {l.strip(): 'GRPC' for l in fh.readlines()} + with open(ENTITIES_PATH) as file: + reader = csv.reader( + file, + delimiter=',', + lineterminator='\r\n', + quoting=csv.QUOTE_MINIMAL, + quotechar='"', + ) + return { + fplx_name: 'GRPC' + for _, fplx_name, _, _ in reader + } -def _write_namespace(values): +def _write_namespace(values, output_file): with open(output_file, 'w') as file: write_namespace( namespace_name='FamPlex', @@ -38,6 +48,10 @@ def _write_namespace(values): ) -if __name__ == '__main__': +def main(output_file=DEFAULT_BELNS_PATH): entities = _get_entities() - _write_namespace(entities) + _write_namespace(entities, output_file) + + +if __name__ == '__main__': + main() diff --git a/famplex/export/export_obo.py b/famplex/export/export_obo.py new file mode 100644 index 000000000..3f4688dbe --- /dev/null +++ b/famplex/export/export_obo.py @@ -0,0 +1,231 @@ +import collections +import csv +import datetime +import os + +from famplex.constants import ( + ENTITIES_PATH, EQUIVALENCES_PATH, EXPORT_DIR, GROUNDING_MAP_PATH, RELATIONS_PATH, +) + +DEFAULT_OBO_PATH = os.path.join(EXPORT_DIR, 'famplex.obo') + +Synonym = collections.namedtuple('Synonym', ['name', 'status']) + + +class Reference: + def __init__(self, db, identifier, name=None): + self.db = db + self.id = identifier + self.name = name + + +ROOT_REFERENCE = Reference('FPLX', '000000', 'famplex') + + +class OboTerm: + def __init__( + self, + *, + term_id, + description=None, + references=None, + rels=None, + synonyms=None, + xrefs=None, + ): + self.term_id = term_id + self.description = description + self.references = references + self.rels = rels or {} + self.synonyms = synonyms or [] + self.xrefs = xrefs or [] + + def to_obo(self): + obo_str = '[Term]\n' + obo_str += 'id: %s:%s\n' % (self.term_id.db, self.term_id.id) + obo_str += 'name: %s\n' % self.term_id.name + if self.description is not None: + obo_str += 'def: "%s" [%s]\n' % (self.description, ','.join(self.references)) + + for synonym in self.synonyms: + obo_str += 'synonym: "%s" %s []\n' % (synonym.name, synonym.status) + + for xref in self.xrefs: + if xref.db == 'BEL': + entry = 'BEL:"%s"' % xref.id + elif xref.db == 'NXP': + entry = 'NEXTPROT-FAMILY:%s' % xref.id[3:] + elif xref.db == 'PF': + entry = 'XFAM:%s' % xref.id + elif xref.db == 'GO': + entry = xref.id + else: + entry = '%s:%s' % (xref.db, xref.id) + + if xref.name is not None: + entry += f' ! {xref.name}' + + obo_str += 'xref: %s\n' % entry + + for rel_type, rel_entries in self.rels.items(): + for ref in rel_entries: + if rel_type == 'is_a': + obo_str += '%s: %s:%s' % (rel_type, ref.db, ref.id) + else: + obo_str += 'relationship: %s %s:%s' % (rel_type, ref.db, ref.id) + if ref.name is not None: + obo_str += f' ! {ref.name}' + obo_str += '\n' + + return obo_str + + def __str__(self): + return self.to_obo() + + +ROOT_OBO_TERM = OboTerm(term_id=ROOT_REFERENCE) + + +def get_obo_terms(): + obo_terms = [ROOT_OBO_TERM] + + with open(ENTITIES_PATH) as fh: + reader = csv.reader( + fh, + delimiter=',', + lineterminator='\r\n', + quoting=csv.QUOTE_MINIMAL, + quotechar='"', + ) + entities = { + fplx_id: ( + fplx_name, + None if not description or description == '.' else description, + None if not references or references == '.' else [r.strip() for r in references.split(',')], + ) + for fplx_id, fplx_name, description, references in reader + } + + with open(EQUIVALENCES_PATH, 'r') as fh: + reader = csv.reader( + fh, + delimiter=',', + lineterminator='\r\n', + quoting=csv.QUOTE_MINIMAL, + quotechar='"', + ) + equivalences = collections.defaultdict(list) + for xref_db, xref_id, fplx_id, _ in reader: + equivalences[fplx_id].append((xref_db, xref_id)) + + with open(GROUNDING_MAP_PATH) as fh: + reader = csv.reader( + fh, + delimiter=',', + lineterminator='\r\n', + quoting=csv.QUOTE_MINIMAL, + quotechar='"', + ) + textrefs = collections.defaultdict(list) + for textref, db, db_id, _ in reader: + if db == 'FPLX': + textrefs[db_id].append(textref) + + with open(RELATIONS_PATH) as fh: + rels = { + entity: collections.OrderedDict( + is_a=[], + part_of=[], + inverse_is_a=[], + has_part=[], + ) + for entity in entities + } + reader = csv.reader( + fh, + delimiter=',', + lineterminator='\r\n', + quoting=csv.QUOTE_MINIMAL, + quotechar='"', + ) + for sub_db, sub_id, sub_name, rel, obj_db, obj_id, obj_name in reader: + if sub_db == 'FPLX': + if rel == 'isa': + rels[sub_id]['is_a'].append(Reference(obj_db, obj_id, obj_name)) + elif rel == 'partof': + rels[sub_id]['part_of'].append(Reference(obj_db, obj_id, obj_name)) + if obj_db == 'FPLX': + if rel == 'isa': + rels[obj_id]['inverse_is_a'].append(Reference(sub_db, sub_id, sub_name)) + elif rel == 'partof': + rels[obj_id]['has_part'].append(Reference(sub_db, sub_id, sub_name)) + + # For each entity in famplex + for fplx_id, (fplx_name, description, references) in entities.items(): + name = fplx_name.replace('_', '-') + + term_id = Reference('FPLX', fplx_id, name) + + synonyms = [ # Get synonyms + Synonym(textref, 'EXACT') + for textref in textrefs.get(fplx_id, []) + ] + + xrefs = [ # Get xrefs + Reference(xref_db, xref_id) + for xref_db, xref_id in equivalences.get(fplx_id, []) + ] + # If the entity has no isa relations, connect it to the root + if not rels[fplx_id]['is_a'] and not rels[fplx_id]['part_of']: + rels[fplx_id]['is_a'].append(ROOT_REFERENCE) + + obo_term = OboTerm( + term_id=term_id, + description=description, + references=references, + rels=rels[fplx_id], + synonyms=synonyms, + xrefs=xrefs, + ) + obo_terms.append(obo_term) + + return obo_terms + + +def save_obo_terms(obo_terms, output_file): + date = datetime.datetime.today() + date_str = date.strftime('%d:%m:%Y %H:%M') + with open(output_file, 'w') as fh: + fh.write('format-version: 1.2\n') + fh.write('date: %s\n' % date_str) + fh.write(""" +[Typedef] +id: part_of +name: part of +namespace: external +xref: BFO:0000050 +is_transitive: true + +[Typedef] +id: inverse_is_a +name: inverse is_a + +[Typedef] +id: has_part +name: has part + +""") + + for term in obo_terms: + obo_str = term.to_obo() + fh.write(obo_str) + fh.write('\n') + + +def main(): + obo_terms = get_obo_terms() + save_obo_terms(obo_terms, DEFAULT_OBO_PATH) + + +if __name__ == '__main__': + main() diff --git a/famplex/export/export_relations_graph.py b/famplex/export/export_relations_graph.py new file mode 100644 index 000000000..380583c56 --- /dev/null +++ b/famplex/export/export_relations_graph.py @@ -0,0 +1,55 @@ +import csv +import os + +import pygraphviz as pgv + +from famplex.constants import EXPORT_DIR, RELATIONS_PATH + +DEFAULT_RELATIONS_GRAPH_PATH = os.path.join(EXPORT_DIR, 'relations_graph.pdf') + +HGNC_STYLE = { + 'color': 'lightgray', + 'style': 'filled', + 'fontname': 'arial', +} +FAMPLEX_STYLE = { + 'color': 'pink', + 'style': 'filled', + 'fontname': 'arial', +} +EDGE_STYLE = { + 'fontname': 'arial', +} + + +def node_label(db, db_id, name): + return '%s:%s ! %s' % (db, db_id, name) + + +def main(output_file=DEFAULT_RELATIONS_GRAPH_PATH): + graph = pgv.AGraph(name='relations', directed=True, rankdir='LR') + + with open(RELATIONS_PATH) as file: + reader = csv.reader( + file, + delimiter=',', + lineterminator='\r\n', + quoting=csv.QUOTE_MINIMAL, + quotechar='"', + ) + for ns1, id1, name1, rel, ns2, id2, name2 in reader: + sub, obj = node_label(ns1, id1, name1), node_label(ns2, id2, name2) + + for db, label in ((ns1, sub), (ns2, obj)): + if db == 'HGNC': + graph.add_node(label, **HGNC_STYLE) + elif db == 'FPLX': + graph.add_node(label, **FAMPLEX_STYLE) + + graph.add_edge(sub, obj, label=rel, **EDGE_STYLE) + + graph.draw(output_file, prog='dot') + + +if __name__ == '__main__': + main() diff --git a/famplex/export/hgnc_ids.py b/famplex/export/hgnc_ids.py new file mode 100644 index 000000000..545aaedbe --- /dev/null +++ b/famplex/export/hgnc_ids.py @@ -0,0 +1,56 @@ +"""Several files in this resource use HGNC gene symbols to identify individual +genes. However, the symbols assigned to HGNC IDs can change over time, and +therefore previously curated symbols can become invalid. This script +generates a mapping of current (i.e. at the time of running the script) +mappings of HGNC IDs to symbols so that the assumptions about the identity +of the genes in the various tables can be traced.""" + +import csv +import os + +from famplex.constants import EXPORT_DIR, GROUNDING_MAP_PATH, RELATIONS_PATH +from indra.databases import hgnc_client + +HERE = os.path.dirname(os.path.abspath(__file__)) +HGNC_SYMBOL_MAP_PATH = os.path.join(EXPORT_DIR, 'hgnc_symbol_map.csv') + + +def main(): + hgnc_symbols = set() + # Gather all HGNC symbols from relations.csv + with open(RELATIONS_PATH) as f: + reader = csv.reader( + f, + delimiter=',', + lineterminator='\r\n', + quoting=csv.QUOTE_MINIMAL, + quotechar='"', + ) + for ns1, id1, n1, rel, ns2, id2, n2 in reader: + if ns1 == 'HGNC': + hgnc_symbols.add(n1) + if ns2 == 'HGNC': + hgnc_symbols.add(n2) + + # Gather all HGNC symbols from grounding_map.csv + with open(GROUNDING_MAP_PATH) as f: + reader = csv.reader( + f, + delimiter=',', + lineterminator='\r\n', + quoting=csv.QUOTE_MINIMAL, + quotechar='"', + ) + for text, db, db_id, db_name in reader: + if db == 'HGNC': + hgnc_symbols.add(db_name) + + # Create output file + with open(HGNC_SYMBOL_MAP_PATH, 'w') as fh: + for hgnc_symbol in sorted(list(hgnc_symbols)): + hgnc_id = hgnc_client.get_hgnc_id(hgnc_symbol) + fh.write('%s,%s\r\n' % (hgnc_symbol, hgnc_id)) + + +if __name__ == '__main__': + main() diff --git a/famplex/reorganize_old_resources.py b/famplex/reorganize_old_resources.py new file mode 100644 index 000000000..d25877532 --- /dev/null +++ b/famplex/reorganize_old_resources.py @@ -0,0 +1,212 @@ +# -*- coding: utf-8 -*- + +"""This script upgrades all of the FamPlex CSV files.""" + +import csv +import json +import os +import time +from collections import Counter +from operator import itemgetter +from typing import Tuple + +from famplex.constants import ( + ENTITIES_PATH, EQUIVALENCES_PATH, GROUNDING_MAP_PATH, METADATA_PATH, + RELATIONS_PATH, +) +from indra.databases import chebi_client, go_client, hgnc_client, mesh_client, mirbase_client, uniprot_client + +HERE = os.path.abspath(os.path.dirname(__file__)) + +# Input paths +INPUT_RESOURCES = os.path.join(HERE, os.pardir) +ENTITIES_CSV_PATH = os.path.join(INPUT_RESOURCES, 'entities.csv') +EQUIVALENCES_CSV_PATH = os.path.join(INPUT_RESOURCES, 'equivalences.csv') +GROUNDING_MAP_CSV_PATH = os.path.join(INPUT_RESOURCES, 'grounding_map.csv') +RELATIONS_CSV_PATH = os.path.join(INPUT_RESOURCES, 'relations.csv') +DESCRIPTIONS_CSV_PATH = os.path.join(INPUT_RESOURCES, 'descriptions.csv') + +FAMPLEX_DESCRIPTION = 'A protein family, complex, family of complexes,or complex of families' + +client_id_lookups = [ + ('HGNC', hgnc_client.get_hgnc_id), +] + +client_name_lookups = [ + ('UP', uniprot_client.get_mnemonic), + ('GO', go_client.get_go_label), + ('MESH', mesh_client.get_mesh_name), + ('MIRBASE', mirbase_client.get_mirbase_name_from_mirbase_id), + ('CHEBI', chebi_client.get_chebi_name_from_id), +] + + +def main(): + fplx_name_to_id = {} + + def get_id_label(db: str, db_id: str) -> Tuple[str, str]: + if db == 'FPLX': + return fplx_name_to_id[db_id], db_id + + for client, lookup in client_id_lookups: + if db == client: + return lookup(db_id), db_id + + for client, lookup in client_name_lookups: + if db == client: + return db_id, lookup(db_id) + + else: + return db_id, '' + + with open('descriptions.csv') as in_file: + reader = csv.reader( + in_file, + delimiter=',', + lineterminator='\r\n', + quoting=csv.QUOTE_MINIMAL, + quotechar='"', + ) + fplx_name_to_description = { + fplx_name: ( + description, + [r.strip() for r in references.split(';')], + ) + for fplx_name, references, description in reader + } + + with open('entities.csv') as in_file, open(ENTITIES_PATH, 'w') as out_file: + writer = csv.writer( + out_file, + delimiter=',', + quotechar='"', + quoting=csv.QUOTE_MINIMAL, + lineterminator='\r\n', + ) + for i, fplx_name in enumerate(in_file, start=1): + fplx_name = fplx_name.strip() + fplx_id = fplx_name_to_id[fplx_name] = f'{i:06}' + description, references = fplx_name_to_description.get(fplx_name, (None, None)) + writer.writerow(( + fplx_id, + fplx_name, + description if description is not None else '', + ','.join(references) if references is not None else '', + )) + + with open('equivalences.csv') as in_file, open(EQUIVALENCES_PATH, 'w') as out_file: + # print('xref_db', 'xref_id', 'fplx_id', 'fplx_name', sep='\t', file=out_file) + reader = csv.reader( + in_file, + delimiter=',', + lineterminator='\r\n', + quoting=csv.QUOTE_MINIMAL, + quotechar='"', + ) + writer = csv.writer( + out_file, + delimiter=',', + quotechar='"', + quoting=csv.QUOTE_MINIMAL, + lineterminator='\r\n', + ) + for xref_db, xref_name, fplx_name in reader: + writer.writerow(( + xref_db, + xref_name, + fplx_name_to_id[fplx_name], + fplx_name, + )) + + groundings_unlabelled = set() + with open('grounding_map.csv') as in_file, open(GROUNDING_MAP_PATH, 'w') as out_file: + reader = csv.reader( + in_file, + delimiter=',', + lineterminator='\r\n', + quoting=csv.QUOTE_MINIMAL, + quotechar='"', + ) + writer = csv.writer( + out_file, + delimiter=',', + quotechar='"', + quoting=csv.QUOTE_MINIMAL, + lineterminator='\r\n', + ) + for text, *line in reader: + for xref_db, identifier in zip(line[::2], line[1::2]): + if not xref_db or not identifier: + continue + + identifier, xref_name = get_id_label(xref_db, identifier) + if not xref_name: + groundings_unlabelled.add((xref_db, identifier)) + + writer.writerow((text, xref_db, identifier, xref_name)) + + # Logging for unlabelled entities + if groundings_unlabelled: + print(f'\n{len(groundings_unlabelled)} groundings are unlabelled:') + grounding_unlabelled_counter = Counter(map(itemgetter(0), groundings_unlabelled)) + s = max(map(len, grounding_unlabelled_counter)) + for xref_db, count in grounding_unlabelled_counter.most_common(): + print(f'{xref_db:>{s}s} unlabelled {count}') + + relations_unlabelled = set() + with open('relations.csv') as in_file, open(RELATIONS_PATH, 'w') as out_file: + # print('sub_db', 'sub_id', 'sub_name', 'rel', + # 'obj_db', 'obj_id', 'obj_name', sep='\t', file=out_file) + + reader = csv.reader( + in_file, + delimiter=',', + lineterminator='\r\n', + quoting=csv.QUOTE_MINIMAL, + quotechar='"', + ) + writer = csv.writer( + out_file, + delimiter=',', + quotechar='"', + quoting=csv.QUOTE_MINIMAL, + lineterminator='\r\n', + ) + for sub_db, sub_id, rel, obj_db, obj_id in reader: + sub_id, sub_name = get_id_label(sub_db, sub_id) + if not sub_name: + relations_unlabelled.add((sub_db, sub_id)) + + obj_id, obj_name = get_id_label(obj_db, obj_id) + if not obj_name: + relations_unlabelled.add((obj_db, obj_id)) + + writer.writerow(( + sub_db, sub_id, sub_name, rel, + obj_db, obj_id, obj_name + )) + + if relations_unlabelled: # Logging for unlabelled entities + print(f'\n{len(relations_unlabelled)} relations are unlabelled:') + relations_unlabelled_counter = Counter(map(itemgetter(0), relations_unlabelled)) + s = max(map(len, relations_unlabelled_counter)) + for xref_db, count in relations_unlabelled_counter.most_common(): + print(f'{xref_db:>{s}s} unlabelled {count}') + + metadata = { + 'Time Exported': str(time.asctime()), + 'Unlabelled Groundings': [ + dict(db=db, db_id=db_id) + for db, db_id in sorted(groundings_unlabelled) + ], + 'Unlabelled Relations': [ + dict(db=db, db_id=db_id) + for db, db_id in sorted(relations_unlabelled) + ] + } + with open(METADATA_PATH, 'w') as file: + json.dump(metadata, file, indent=2, sort_keys=True) + + +if __name__ == '__main__': + main() diff --git a/famplex/resources/entities.csv b/famplex/resources/entities.csv new file mode 100644 index 000000000..a25a3f801 --- /dev/null +++ b/famplex/resources/entities.csv @@ -0,0 +1,505 @@ +000001,9_1_1,, +000002,A4GALT_family,, +000003,ABL_family,, +000004,ACAD,, +000005,ACC,, +000006,Acetyl_CoA_synthetase,, +000007,ACOX,, +000008,ACSL,, +000009,Actin,, +000010,Activin,, +000011,Activin_A,, +000012,Activin_AB,, +000013,Activin_B,, +000014,ACTN,, +000015,Adaptor_protein_II,, +000016,Adaptor_protein_III,, +000017,ADCY,, +000018,ADH,, +000019,ADRA,, +000020,ADRA2,, +000021,ADRB,, +000022,ADRBK,, +000023,AKT,, +000024,ALDH,, +000025,ALDO,, +000026,ALG10,, +000027,ALG1_family,, +000028,ALG3_family,, +000029,ALG6_family,, +000030,ALG13_family,, +000031,AMPK,, +000032,AMPK_A1B1G1,, +000033,AMPK_A1B1G2,, +000034,AMPK_A1B1G3,, +000035,AMPK_A1B2G1,, +000036,AMPK_A1B2G2,, +000037,AMPK_A1B2G3,, +000038,AMPK_A2B1G1,, +000039,AMPK_A2B1G2,, +000040,AMPK_A2B1G3,, +000041,AMPK_A2B2G1,, +000042,AMPK_A2B2G2,, +000043,AMPK_A2B2G3,, +000044,AMPK_alpha,, +000045,AMPK_beta,, +000046,AMPK_gamma,, +000047,Annexin_II_heterotetramer,, +000048,AP1,, +000049,AP2A,, +000050,APC_C,, +000051,APOA,, +000052,Apolipoprotein,, +000053,ARF_GTPase_family,, +000054,Arp2_3_protein,, +000055,ARRB,, +000056,ATG4,, +000057,ATP1A,, +000058,ATP1B,, +000059,ATP5G,, +000060,ATP_synthase,, +000061,Augmin,, +000062,AXIN,, +000063,B3GAT,, +000064,BCKDC,, +000065,Beta_3_4_GTF,, +000066,BIRC,, +000067,BMP,, +000068,BMP_receptor,, +000069,BMP_receptor_type_I,, +000070,BMP_receptor_type_II,, +000071,BRCA,, +000072,C1,, +000073,C1q,, +000074,Cadherin,, +000075,CALM,, +000076,CAMK,, +000077,CAMK2_complex,, +000078,CAMK2_family,, +000079,CAPN,, +000080,Carboxylesterase,, +000081,Caspase,, +000082,Caspase_3_7,, +000083,CAV,, +000084,CBF3,SKP1 (together with SKP2) was identified as an essential component of the cyclin A-CDK2 S phase kinase complex,interpro:IPR016072 +000085,CCT_complex,, +000086,CD16,, +000087,CD3,, +000088,CD32,, +000089,CD64,, +000090,CD8,, +000091,CDC25,, +000092,CDK,, +000093,CDK1_2,, +000094,CDKN,, +000095,CDKN1,, +000096,CDKN2,, +000097,CEBP,, +000098,CHEK,, +000099,Chemokine,, +000100,Chemokine_receptor,, +000101,Cholinesterase,, +000102,CHRM,, +000103,CHRN,, +000104,CK2,, +000105,Clathrin,, +000106,CNKSR,, +000107,Cofilin,, +000108,Cohesin,, +000109,COL1,, +000110,COL4,, +000111,COL5,, +000112,COLGALT,, +000113,COX,, +000114,COX4,, +000115,COX6A,, +000116,COX6B,, +000117,COX7A,, +000118,COX7B,, +000119,COX8,, +000120,CREB,, +000121,CRISP,, +000122,CRSP,, +000123,CRTC,, +000124,CSNK1,, +000125,CSNK2,, +000126,CTNNA,, +000127,CUL,, +000128,CXCL_ELR_negative,, +000129,CXCL_ELR_positive,, +000130,Cyclin,, +000131,Cyclin_A,, +000132,Cyclin_D,, +000133,Cyclin_E,, +000134,Cyclophilin,, +000135,Cytoplasmic_dynein,, +000136,DDR,, +000137,Death_receptor,, +000138,Desmoglein,, +000139,DGC,, +000140,DGK,, +000141,DNA_polymerase_delta,, +000142,DNM,, +000143,DRD,, +000144,DUSP,, +000145,DVL,, +000146,DYRK,, +000147,E2F,, +000148,E3_Ub_ligase,, +000149,EDN,, +000150,EGFR_ligand,, +000151,EGR,, +000152,EIF2B,, +000153,EIF4A,, +000154,EIF4EBP,, +000155,EIF4G,, +000156,ELA,, +000157,ENO,, +000158,Ephrin_receptor,, +000159,EPN,, +000160,ERBB,, +000161,ERK,, +000162,ESR,, +000163,ETS,, +000164,EXOC,, +000165,EXT,, +000166,FANC,, +000167,FGF,, +000168,FGFR,, +000169,Fibrinogen,, +000170,FLOT,, +000171,FLRT,, +000172,FNT,, +000173,FOS_family,, +000174,FOXO,, +000175,FSH,, +000176,FUT,, +000177,FZD,, +000178,F_actin,, +000179,GABR,, +000180,GALNT,, +000181,Gamma_secretase,, +000182,GAP,, +000183,GAS6_receptor,, +000184,GATA,, +000185,GCNT,, +000186,GEF,, +000187,GPCR,, +000188,GPIb_IX_V,, +000189,GPIT,, +000190,GPX,, +000191,GRIA,, +000192,GRK,, +000193,GRM,, +000194,GSK3,, +000195,GST,, +000196,GTF2E,, +000197,GTF2F,, +000198,Glycosyltransferase,, +000199,GTF_family_2,, +000200,GTF_family_6,, +000201,GTF_family_8,, +000202,GTF_family_29,, +000203,GTF_family_90,, +000204,GTPase,, +000205,GUCY,, +000206,GYS,, +000207,G_12,, +000208,G_12_alpha,, +000209,G_alpha,, +000210,G_beta,, +000211,G_gamma,, +000212,G_i,, +000213,G_i_alpha,, +000214,G_protein,, +000215,G_q,, +000216,G_q_alpha,, +000217,G_s,, +000218,G_s_alpha,, +000219,hCG,, +000220,HDAC,, +000221,HDAC_I,, +000222,HDAC_II,, +000223,HDAC_III,, +000224,HDAC_IV,, +000225,HDL,, +000226,Hedgehog,, +000227,Hemoglobin,, +000228,HES,, +000229,HIF,, +000230,HIF1,, +000231,HIF_alpha,, +000232,HIF_beta,, +000233,Histone,, +000234,Histone_H1,, +000235,Histone_H2A,, +000236,Histone_H2B,, +000237,Histone_H3,, +000238,Histone_H4,, +000239,HLA_DR,, +000240,HMOX,, +000241,HSP90,, +000242,HSP90A,, +000243,HSP90AA,, +000244,HSPA,, +000245,HSPB,, +000246,IFNA,, +000247,IFNB,, +000248,IGFBP,, +000249,IKB,, +000250,IKK_complex,, +000251,IKK_family,, +000252,IL1,, +000253,IL12,, +000254,IL15R,, +000255,IL2R,, +000256,Inhibin,, +000257,Inhibin_A,, +000258,Inhibin_B,, +000259,INS,, +000260,INSR,, +000261,Integrins,, +000262,Interferon,, +000263,Interferon_gamma_receptor,, +000264,IRS,, +000265,IRX,, +000266,JAK,, +000267,JNK,, +000268,JUN_family,, +000269,Kainate_family,, +000270,Kinetochore,, +000271,KLK,, +000272,KSR,, +000273,Laminin_111,, +000274,Laminin_332,, +000275,LDH,, +000276,LH,, +000277,LPAR,, +000278,MAC,, +000279,MAF,, +000280,MAP1LC3,, +000281,MAP2K,, +000282,MAP3K,, +000283,MAPK,, +000284,MCM,, +000285,MEF2,, +000286,MEK,, +000287,MGAT,, +000288,Mitochondrial_Ribosome,, +000289,MRPS,, +000290,MRPL,, +000291,MMP,, +000292,Metallothionein,, +000293,mTORC1,, +000294,mTORC2,, +000295,MYH,, +000296,MYL,, +000297,MYL_alkali,, +000298,MYL_regulatory,, +000299,MYL_slow,, +000300,MYST,, +000301,NADH_dehydrogenase,, +000302,NADPH_oxidase,, +000303,Na_K_ATPase,, +000304,Natriuretic_peptide,, +000305,NCOA,, +000306,NCOR,, +000307,NDRG,, +000308,Neurexins,, +000309,NFAT,, +000310,NFE,, +000311,NFkappaB,, +000312,NFkappaB_1,, +000313,NFkappaB_2,, +000314,NFY,, +000315,NKD,, +000316,NOS,, +000317,Notch,, +000318,NRG,, +000319,NRG_1_2,, +000320,NRG_3_4,, +000321,NTRK,, +000322,OGT_family,, +000323,p14_3_3,, +000324,P2RX,, +000325,P2RY,, +000326,p38,, +000327,p53_family,, +000328,P70S6K,, +000329,P90RSK,, +000330,PAK,, +000331,PARP,, +000332,PARV,, +000333,Patched,, +000334,PBX,, +000335,PDE,, +000336,PDE1,, +000337,PDE3,, +000338,PDE4,, +000339,PDE6,, +000340,PDE7,, +000341,PDE8,, +000342,PDGF,, +000343,PDGFR,, +000344,PDGFR_AA,, +000345,PDGFR_AB,, +000346,PDGFR_BB,, +000347,PDGF_AA,, +000348,PDGF_AB,, +000349,PDGF_BB,, +000350,PDGF_CC,, +000351,PDGF_DD,, +000352,PDH,, +000353,PDK,, +000354,Pertussis_toxin,, +000355,PFN,, +000356,PhK,, +000357,Phosphatase,, +000358,PI3K,, +000359,PI3K_p110,, +000360,PI3K_p85,, +000361,PIK3R_I,, +000362,PIM,, +000363,PKA,, +000364,PKC,, +000365,PKI,, +000366,PLA2,, +000367,PLA2G2,, +000368,PLA2G4,, +000369,PLC,, +000370,PLCB,, +000371,PLCD,, +000372,PLCG,, +000373,PLD,, +000374,PPAP2,, +000375,PPAR,, +000376,PPP1,, +000377,PPP1C,, +000378,PPP1R,, +000379,PPP2,, +000380,PPP2C,, +000381,PPP2R_A,, +000382,PPP2R_B,, +000383,PPP3,, +000384,PPP3C,, +000385,PPP3R,, +000386,PRC1_complex,, +000387,PRC2_complex,, +000388,PRDX,, +000389,PRKAC,, +000390,PRKAR,, +000391,PRKG,, +000392,Propionyl_CoA_carboxylase,, +000393,Protease,, +000394,Proteasome,, +000395,PTGER,, +000396,PYG,, +000397,RAB,, +000398,RAC,, +000399,RAF,, +000400,RAL,, +000401,RAP1,, +000402,RAPGEF,, +000403,RAR,, +000404,RAS,, +000405,RASA,, +000406,RASAL,, +000407,RasGAP,, +000408,RASGRF,, +000409,RASGRP,, +000410,RASSF,, +000411,RFC,, +000412,RFX,, +000413,RGL,, +000414,RHO,, +000415,RhoGDI,, +000416,RNApo_I,, +000417,RNApo_II,, +000418,ROBO,, +000419,ROCK,, +000420,ROR,, +000421,RPA,, +000422,RSK,, +000423,RTK,, +000424,RXR,, +000425,S100,, +000426,S100A,, +000427,S1PR,, +000428,SAA,, +000429,SCD,, +000430,SERCA,, +000431,SERPINB,, +000432,SHC,, +000433,SIK,, +000434,SLC2A,, +000435,SLRP,, +000436,SLRP_1,, +000437,SLRP_2,, +000438,SLRP_3,, +000439,SLRP_4,, +000440,SLRP_5,, +000441,SMAD,, +000442,SMAD1_5_9,, +000443,SMAD2_3,, +000444,SMC1,, +000445,SMURF,, +000446,SNAI,, +000447,SOD,, +000448,SOS,, +000449,SPRED,, +000450,SPRY,, +000451,SRC,, +000452,SREBF,, +000453,STAT,, +000454,STAT5,, +000455,STT3,, +000456,Sulfonylurea_receptor,, +000457,SWI_SNF,, +000458,TAOK,, +000459,TAP,, +000460,TCF_LEF,, +000461,TCR,, +000462,TEAD,, +000463,TFAP2,, +000464,TFDP,, +000465,TGFB,, +000466,TGFBR,, +000467,THBS,, +000468,THR,, +000469,Thrombin_antithrombin,, +000470,TIAM,, +000471,TIF_IB,, +000472,TLR,, +000473,TN,, +000474,TNF,, +000475,TNFRSF,, +000476,TOP2,, +000477,Troponin,, +000478,Troponin_C,, +000479,Troponin_I,, +000480,Troponin_T,, +000481,Tryptase,, +000482,TSC,, +000483,TUBA,, +000484,TUBB,, +000485,TUBG,, +000486,Tubulin,, +000487,TXN,, +000488,TXNRD,, +000489,UBE2,, +000490,Ubiquitin,, +000491,UGCG,, +000492,UGT,, +000493,UGGT,, +000494,VAV,, +000495,VEGF,, +000496,VEGFR,, +000497,Wnt,, +000498,YBX,, +000499,ETC_complex_I_core,, +000500,ETC_complex_I_supernumerary,, +000501,ETC_complex_I,, +000502,ETC_complex_II,, +000503,ETC_complex_III,, +000504,ETC_complex_IV,, +000505,ETC_complex_V,, diff --git a/famplex/resources/equivalences.csv b/famplex/resources/equivalences.csv new file mode 100644 index 000000000..86383dda2 --- /dev/null +++ b/famplex/resources/equivalences.csv @@ -0,0 +1,1582 @@ +BEL,14-3-3 Family,000323,p14_3_3 +BEL,9-1-1 Complex,000001,9_1_1 +BEL,ACAD Family,000004,ACAD +BEL,Acetyl CoA Carboxylase Complex,000005,ACC +BEL,Acetyl-CoA Synthetase Family,000006,Acetyl_CoA_synthetase +BEL,ACOX Family,000007,ACOX +BEL,ACSL Family,000008,ACSL +BEL,ACT Family,000009,Actin +BEL,ACTN Family,000014,ACTN +BEL,Adaptor Protein II Complex,000015,Adaptor_protein_II +BEL,Adaptor Protein III Complex,000016,Adaptor_protein_III +BEL,ADCY Family,000017,ADCY +BEL,ADH Family,000018,ADH +BEL,ADRA Family,000019,ADRA +BEL,ADRA2 Family,000020,ADRA2 +BEL,ADRB Family,000021,ADRB +BEL,ADRBK Family,000022,ADRBK +BEL,AKT Family,000023,AKT +BEL,ALDH Family,000024,ALDH +BEL,ALDO Family,000025,ALDO +BEL,AMP Activated Protein Kinase Complex,000031,AMPK +BEL,Annexin II Heterotetramer Complex,000047,Annexin_II_heterotetramer +BEL,AP-1 Complex,000048,AP1 +BEL,APOA Family,000051,APOA +BEL,Arp2/3 Protein Complex,000054,Arp2_3_protein +BEL,ARRB Family,000055,ARRB +BEL,ATP2A Family,000430,SERCA +BEL,ATP5G Family,000059,ATP5G +BEL,AXIN Family,000062,AXIN +BEL,BIRC Family,000066,BIRC +BEL,BMP Family,000067,BMP +BEL,BMP Receptor Type I Family,000069,BMP_receptor_type_I +BEL,BMP Receptor Type II Family,000070,BMP_receptor_type_II +BEL,Branched Chain Alpha Keto Acid Dehydrogenase Complex,000064,BCKDC +BEL,C1 Complex,000072,C1 +BEL,C1q Complex,000073,C1q +BEL,Calcineurin Complex,000383,PPP3 +BEL,CALM Family,000075,CALM +BEL,CAMK Family,000076,CAMK +BEL,CAMK2 Complex,000077,CAMK2_complex +BEL,CAMK2 Family,000078,CAMK2_family +BEL,CAPN Family,000079,CAPN +BEL,Carboxylesterase Family,000080,Carboxylesterase +BEL,CASP Family,000081,Caspase +BEL,CAV Family,000083,CAV +BEL,CBF3 Complex,000084,CBF3 +BEL,CCNA Family,000131,Cyclin_A +BEL,CCND Family,000132,Cyclin_D +BEL,CCNE Family,000133,Cyclin_E +BEL,CCT Complex,000085,CCT_complex +BEL,CD16 Family,000086,CD16 +BEL,CD3 Complex,000087,CD3 +BEL,CD32 Family,000088,CD32 +BEL,CD64 Family,000089,CD64 +BEL,CDC25 Family,000091,CDC25 +BEL,CDH Family,000074,Cadherin +BEL,CEBP Family,000097,CEBP +BEL,Chemokine Receptor Family,000100,Chemokine_receptor +BEL,Cholinesterase Family,000101,Cholinesterase +BEL,CHRM Family,000102,CHRM +BEL,CHRN Complex,000103,CHRN +BEL,CK II Complex,000104,CK2 +BEL,Clathrin Complex,000105,Clathrin +BEL,Cohesin Complex,000108,Cohesin +BEL,COL1 Family,000109,COL1 +BEL,COL4 Family,000110,COL4 +BEL,COL5 Family,000111,COL5 +BEL,COX4 Family,000114,COX4 +BEL,COX6A Family,000115,COX6A +BEL,COX6B Family,000116,COX6B +BEL,COX7A Family,000117,COX7A +BEL,COX7B Family,000118,COX7B +BEL,COX8 Family,000119,COX8 +BEL,CREB Family,000120,CREB +BEL,CRISP Family,000121,CRISP +BEL,CRSP Complex,000122,CRSP +BEL,CSNK1 Family,000124,CSNK1 +BEL,CSNK2 Family,000125,CSNK2 +BEL,CTNNA Family,000126,CTNNA +BEL,Cu-Zn SOD Family,000447,SOD +BEL,CUL Family,000127,CUL +BEL,CXCL ELR-Negative Family,000128,CXCL_ELR_negative +BEL,CXCL ELR-Positive Family,000129,CXCL_ELR_positive +BEL,Cyclophilin Family,000134,Cyclophilin +BEL,Cytochrome C Oxidase Complex Muscle,000113,COX +BEL,Cytochrome C Oxidase Complex Non Muscle,000113,COX +BEL,Cytoplasmic Dynein Complex,000135,Cytoplasmic_dynein +BEL,DDR Family,000136,DDR +BEL,Desmoglein Family,000138,Desmoglein +BEL,DGK Family,000140,DGK +BEL,DNA Polymerase delta Complex,000141,DNA_polymerase_delta +BEL,DNM Family,000142,DNM +BEL,DRD Family,000143,DRD +BEL,DVL Family,000145,DVL +BEL,Dystrophin Associated Glycoprotein Complex,000139,DGC +BEL,E2F Family,000147,E2F +BEL,EDN Family,000149,EDN +BEL,EGFR Ligand Family,000150,EGFR_ligand +BEL,EGFR/ERBB Family,000160,ERBB +BEL,EGR Family,000151,EGR +BEL,EIF2B Complex,000152,EIF2B +BEL,EIF4A Family,000153,EIF4A +BEL,EIF4EBP Family,000154,EIF4EBP +BEL,ELA Family,000156,ELA +BEL,ENO Family,000157,ENO +BEL,Ephrin Receptor Family,000158,Ephrin_receptor +BEL,EPN Family,000159,EPN +BEL,ESR Family,000162,ESR +BEL,ETS Family,000163,ETS +BEL,FGF Family,000167,FGF +BEL,FGFR Family,000168,FGFR +BEL,Fibrinogen Complex,000169,Fibrinogen +BEL,FLOT Family,000170,FLOT +BEL,FLRT Family,000171,FLRT +BEL,Follicle Stimulating Hormone Complex,000175,FSH +BEL,FOXO Family,000174,FOXO +BEL,FZD Family,000177,FZD +BEL,GABR Family,000179,GABR +BEL,gamma Secretase Complex,000181,Gamma_secretase +BEL,GAS6 Receptor Family,000183,GAS6_receptor +BEL,GATA Family,000184,GATA +BEL,GNA Gq Family,000215,G_q +BEL,GNA Gs Family,000217,G_s +BEL,GNAI Family,000212,G_i +BEL,GNB Family,000210,G_beta +BEL,GNG Family,000211,G_gamma +BEL,GPIT Complex,000189,GPIT +BEL,GPX Family,000190,GPX +BEL,GRIA Family,000191,GRIA +BEL,GRK Family,000192,GRK +BEL,GRM Family,000193,GRM +BEL,GSK3 Family,000194,GSK3 +BEL,GST Family,000195,GST +BEL,GTF2E Complex,000196,GTF2E +BEL,GTF2F Complex,000197,GTF2F +BEL,GUCY Family,000205,GUCY +BEL,GYS Family,000206,GYS +BEL,HDAC Class I Family,000221,HDAC_I +BEL,HDAC Class II Family,000222,HDAC_II +BEL,HDAC Family,000220,HDAC +BEL,HDL Complex,000225,HDL +BEL,Hedgehog Family,000226,Hedgehog +BEL,Hemoglobin Complex,000227,Hemoglobin +BEL,HES Family,000228,HES +BEL,Histone Family,000233,Histone +BEL,Histone H1 Family,000234,Histone_H1 +BEL,Histone H2A Family,000235,Histone_H2A +BEL,Histone H2B Family,000236,Histone_H2B +BEL,Histone H3 Family,000237,Histone_H3 +BEL,Histone H4 Family,000238,Histone_H4 +BEL,HLA-DR Family,000239,HLA_DR +BEL,HMOX Family,000240,HMOX +BEL,HSP90 Family,000241,HSP90 +BEL,HSPA Family,000244,HSPA +BEL,HSPB Family,000245,HSPB +BEL,Ib-V-IX Complex,000188,GPIb_IX_V +BEL,IFNA Family,000246,IFNA +BEL,IGFBP Family,000248,IGFBP +BEL,IkappaB Kinase Complex,000250,IKK_complex +BEL,IkappaB Kinase Family,000251,IKK_family +BEL,IL1 Family,000252,IL1 +BEL,INS Family,000259,INS +BEL,INSR Family,000260,INSR +BEL,Interferon Gamma Receptor Complex,000263,Interferon_gamma_receptor +BEL,IRS Family,000264,IRS +BEL,IRX Family,000265,IRX +BEL,JAK Family,000266,JAK +BEL,Kinetochore Complex,000270,Kinetochore +BEL,KLK Family,000271,KLK +BEL,Laminin 1 Complex,000273,Laminin_111 +BEL,Laminin 5 Complex,000274,Laminin_332 +BEL,LDH Family,000275,LDH +BEL,Luteinizing Hormone Complex,000276,LH +BEL,MAF Family,000279,MAF +BEL,MAPK Erk1/2 Family,000161,ERK +BEL,MAPK Erk1/3 Family,000161,ERK +BEL,MAPK JNK Family,000267,JNK +BEL,MAPK p38 Family,000326,p38 +BEL,MEF2 Family,000285,MEF2 +BEL,MEK1/2 Family,000286,MEK +BEL,Membrane Attack Complex,000278,MAC +BEL,MMP Family,000291,MMP +BEL,MYH Family,000295,MYH +BEL,MYL Alkali Family,000297,MYL_alkali +BEL,MYL Family,000296,MYL +BEL,MYL Regulatory Family,000298,MYL_regulatory +BEL,MYL Slow Family,000299,MYL_slow +BEL,MYST Family,000300,MYST +BEL,Na/K Exchanging ATPase Complex,000303,Na_K_ATPase +BEL,NADH Dehydrogenase Complex,000301,NADH_dehydrogenase +BEL,NADPH Oxidase Complex,000302,NADPH_oxidase +BEL,NCOR Family,000306,NCOR +BEL,NDRG Family,000307,NDRG +BEL,NFAT Family,000309,NFAT +BEL,Nfkb Complex,000311,NFkappaB +BEL,Nfy Complex,000314,NFY +BEL,NKD Family,000315,NKD +BEL,NOS Family,000316,NOS +BEL,NOTCH Family,000317,Notch +BEL,NRG1/2 Family,000319,NRG_1_2 +BEL,NRG3/4 Family,000320,NRG_3_4 +BEL,NTRK Family,000321,NTRK +BEL,p160/SRC Family,000305,NCOA +BEL,P2RX Family,000324,P2RX +BEL,P2RY Family,000325,P2RY +BEL,p85/p110 PI3Kinase Complex,000358,PI3K +BEL,PAK Family,000330,PAK +BEL,PARV Family,000332,PARV +BEL,PBX Family,000334,PBX +BEL,PDE Family,000335,PDE +BEL,PDE1 Family,000336,PDE1 +BEL,PDE3 Family,000337,PDE3 +BEL,PDE4 Family,000338,PDE4 +BEL,PDE6 Family,000339,PDE6 +BEL,PDGF Family,000342,PDGF +BEL,PDGFR Family,000343,PDGFR +BEL,PDK Family,000353,PDK +BEL,PFN Family,000355,PFN +BEL,Phosphorylase B Kinase Complex,000356,PhK +BEL,PIK3C Class IA Family,000359,PI3K_p110 +BEL,PIK3R Class IA Family,000361,PIK3R_I +BEL,PKI Family,000365,PKI +BEL,PLA2 Family,000366,PLA2 +BEL,PLA2G2 Family,000367,PLA2G2 +BEL,PLC Family,000369,PLC +BEL,PLCB Family,000370,PLCB +BEL,PLCG Family,000372,PLCG +BEL,PLD Family,000373,PLD +BEL,PPAP2 Family,000374,PPAP2 +BEL,PPAR Family,000375,PPAR +BEL,PPP1C Family,000377,PPP1C +BEL,PPP1R Family,000378,PPP1R +BEL,PPP2C Family,000380,PPP2C +BEL,PPP2R Subunit A Family,000381,PPP2R_A +BEL,PPP2R Subunit B Family,000382,PPP2R_B +BEL,PPP3 Family,000383,PPP3 +BEL,PPP3C Family,000384,PPP3C +BEL,PPP3R Family,000385,PPP3R +BEL,PRC1 Maintenance Complex,000386,PRC1_complex +BEL,PRC2 Initiation Complex,000387,PRC2_complex +BEL,PRDX Family,000388,PRDX +BEL,PRKA Family,000389,PRKAC +BEL,PRKAA Family,000044,AMPK_alpha +BEL,PRKAB Family,000045,AMPK_beta +BEL,PRKAG Family,000046,AMPK_gamma +BEL,PRKAR Family,000390,PRKAR +BEL,PRKC Family,000364,PKC +BEL,PRKG Family,000391,PRKG +BEL,Propionyl CoA Carboxylase Complex,000392,Propionyl_CoA_carboxylase +BEL,Proteasome Complex,000394,Proteasome +BEL,Proton Transporting ATP Synthase Complex,000060,ATP_synthase +BEL,PTGER Family,000395,PTGER +BEL,Pyruvate Dehydrogenase Complex,000352,PDH +BEL,RAB Family,000397,RAB +BEL,RAC Family,000398,RAC +BEL,RAF Family,000399,RAF +BEL,RAR Family,000403,RAR +BEL,RAS Family,000404,RAS +BEL,Respiratory Chain Complex II,000502,ETC_complex_II +BEL,Respiratory Chain Complex III,000503,ETC_complex_III +BEL,RFC Complex,000411,RFC +BEL,RFX Family,000412,RFX +BEL,RHO Family,000414,RHO +BEL,RNApo I Complex,000416,RNApo_I +BEL,RNApo II Complex,000417,RNApo_II +BEL,ROCK Family,000419,ROCK +BEL,ROR Family,000420,ROR +BEL,RPS6KA Family,000329,P90RSK +BEL,RPS6KB Family,000328,P70S6K +BEL,RXR Family,000424,RXR +BEL,S100A Family,000426,S100A +BEL,S1PR Family,000427,S1PR +BEL,SAA Family,000428,SAA +BEL,SCD Family,000429,SCD +BEL,SERPINB Family,000431,SERPINB +BEL,SLC2A Family,000434,SLC2A +BEL,SMAD Family,000441,SMAD +BEL,SMC1 Family,000444,SMC1 +BEL,SNAI Family,000446,SNAI +BEL,SOS Family,000448,SOS +BEL,SRC Family,000451,SRC +BEL,SREBF Family,000452,SREBF +BEL,STAT Family,000453,STAT +BEL,STAT5 Family,000454,STAT5 +BEL,Sulfonylurea Receptor Family,000456,Sulfonylurea_receptor +BEL,SWI/SNF Complex,000457,SWI_SNF +BEL,TAP Family,000459,TAP +BEL,TCF/LEF Family,000460,TCF_LEF +BEL,TFAP2 Family,000463,TFAP2 +BEL,TFDP Family,000464,TFDP +BEL,TGFB Family,000465,TGFB +BEL,THBS Family,000467,THBS +BEL,THR Family,000468,THR +BEL,Thrombin Antithrombin Complex,000469,Thrombin_antithrombin +BEL,TIF IB Complex,000471,TIF_IB +BEL,TN Family,000473,TN +BEL,TNFRSF Family,000475,TNFRSF +BEL,TOP2 Family,000476,TOP2 +BEL,TORC2 Complex,000294,mTORC2 +BEL,Tryptase Family,000481,Tryptase +BEL,TUBA Family,000483,TUBA +BEL,TUBB Family,000484,TUBB +BEL,TXN Family,000487,TXN +BEL,TXNRD Family,000488,TXNRD +BEL,UBE2 Family,000489,UBE2 +BEL,VAV Family,000494,VAV +BEL,VEGF Family,000495,VEGF +BEL,VEGFR Family,000496,VEGFR +BEL,WNT Family,000497,Wnt +COMPLEXPORTAL,CPX-560,000503,ETC_complex_III +COMPLEXPORTAL,CPX-561,000502,ETC_complex_II +COMPLEXPORTAL,CPX-577,000501,ETC_complex_I +ECCODE,1.1.1.1,000018,ADH +ECCODE,1.10.2.2,000503,ETC_complex_III +ECCODE,1.11.1.15,000388,PRDX +ECCODE,1.11.1.9,000190,GPX +ECCODE,1.14.19.1,000429,SCD +ECCODE,1.14.99.3,000240,HMOX +ECCODE,1.2.1.3,000024,ALDH +ECCODE,1.2.4.1,000353,PDK +ECCODE,1.3.5.1,000502,ETC_complex_II +ECCODE,1.3.8.7,000004,ACAD +ECCODE,1.6.5.3,000501,ETC_complex_I +ECCODE,1.6.5.3,000301,NADH_dehydrogenase +ECCODE,1.9.3.1,000113,COX +ECCODE,1.9.3.1,000504,ETC_complex_IV +ECCODE,2.3.2.23,000489,UBE2 +ECCODE,2.5.1.58,000172,FNT +ECCODE,2.7.1.107,000140,DGK +ECCODE,2.7.11.11,000363,PKA +ECCODE,2.7.11.12,000391,PRKG +ECCODE,2.7.11.13,000364,PKC +ECCODE,2.7.11.16,000192,GRK +ECCODE,2.7.11.17,000076,CAMK +ECCODE,2.7.11.19,000356,PhK +ECCODE,2.7.11.22,000092,CDK +ECCODE,2.7.11.24,000283,MAPK +ECCODE,2.7.11.25,000282,MAP3K +ECCODE,2.7.11.31,000031,AMPK +ECCODE,2.7.12.2,000283,MAPK +ECCODE,3.1.1.1,000080,Carboxylesterase +ECCODE,3.1.1.4,000366,PLA2 +ECCODE,3.1.4.-,000335,PDE +ECCODE,3.1.4.4,000373,PLD +ECCODE,3.4.21.35,000271,KLK +ECCODE,3.4.21.59,000481,Tryptase +ECCODE,3.4.25.1,000394,Proteasome +ECCODE,3.5.1.98,000220,HDAC +ECCODE,3.6.3.14,000505,ETC_complex_V +ECCODE,3.6.3.9,000303,Na_K_ATPase +ECCODE,3.6.5.-,000204,GTPase +ECCODE,4.1.2.13,000025,ALDO +ECCODE,4.6.1.2,000205,GUCY +ECCODE,6.4.1.2,000005,ACC +ECCODE,6.4.1.3,000392,Propionyl_CoA_carboxylase +GFAM,1199,000269,Kainate_family +GFAM,1582,000308,Neurexins +GO,GO:0000145,000164,EXOC +GO,GO:0000502,000394,Proteasome +GO,GO:0000776,000270,Kinetochore +GO,GO:0000930,000485,TUBG +GO,GO:0004117,000336,PDE1 +GO,GO:0004198,000079,CAPN +GO,GO:0004199,000081,Caspase +GO,GO:0004886,000424,RXR +GO,GO:0004890,000179,GABR +GO,GO:0004931,000324,P2RX +GO,GO:0004936,000019,ADRA +GO,GO:0004937,000019,ADRA +GO,GO:0004938,000020,ADRA2 +GO,GO:0004952,000143,DRD +GO,GO:0005007,000168,FGFR +GO,GO:0005035,000137,Death_receptor +GO,GO:0005094,000415,RhoGDI +GO,GO:0005096,000182,GAP +GO,GO:0005154,000150,EGFR_ligand +GO,GO:0005161,000342,PDGF +GO,GO:0005162,000167,FGF +GO,GO:0005172,000496,VEGFR +GO,GO:0005355,000434,SLC2A +GO,GO:0005577,000169,Fibrinogen +GO,GO:0005579,000278,MAC +GO,GO:0005584,000109,COL1 +GO,GO:0005587,000110,COL4 +GO,GO:0005588,000111,COL5 +GO,GO:0005610,000274,Laminin_332 +GO,GO:0005663,000411,RFC +GO,GO:0005665,000417,RNApo_II +GO,GO:0005673,000196,GTF2E +GO,GO:0005674,000197,GTF2F +GO,GO:0005680,000050,APC_C +GO,GO:0005736,000416,RNApo_I +GO,GO:0005747,000501,ETC_complex_I +GO,GO:0005749,000502,ETC_complex_II +GO,GO:0005750,000503,ETC_complex_III +GO,GO:0005751,000504,ETC_complex_IV +GO,GO:0005753,000505,ETC_complex_V +GO,GO:0005761,000288,Mitochondrial_Ribosome +GO,GO:0005762,000290,MRPL +GO,GO:0005763,000289,MRPS +GO,GO:0005832,000085,CCT_complex +GO,GO:0005861,000477,Troponin +GO,GO:0005868,000135,Cytoplasmic_dynein +GO,GO:0005884,000009,Actin +GO,GO:0005956,000104,CK2 +GO,GO:0008190,000154,EIF4EBP +GO,GO:0008278,000108,Cohesin +GO,GO:0008279,000108,Cohesin +GO,GO:0008281,000456,Sulfonylurea_receptor +GO,GO:0008433,000186,GEF +GO,GO:0008599,000376,PPP1 +GO,GO:0016010,000139,DGC +GO,GO:0016190,000105,Clathrin +GO,GO:0016904,000103,CHRN +GO,GO:0016914,000175,FSH +GO,GO:0019787,000489,UBE2 +GO,GO:0030122,000015,Adaptor_protein_II +GO,GO:0031518,000084,CBF3 +GO,GO:0031931,000293,mTORC1 +GO,GO:0031941,000178,F_actin +GO,GO:0032281,000191,GRIA +GO,GO:0034364,000225,HDL +GO,GO:0034666,000261,Integrins +GO,GO:0034683,000261,Integrins +GO,GO:0034687,000261,Integrins +GO,GO:0035098,000387,PRC2_complex +GO,GO:0035102,000386,PRC1_complex +GO,GO:0038036,000427,S1PR +GO,GO:0042555,000284,MCM +GO,GO:0042825,000459,TAP +GO,GO:0043509,000011,Activin_A +GO,GO:0043511,000256,Inhibin +GO,GO:0043625,000141,DNA_polymerase_delta +GO,GO:0045275,000503,ETC_complex_III +GO,GO:0048180,000010,Activin +GO,GO:0070652,000061,Augmin +GO,GO:0070765,000181,Gamma_secretase +GO,GO:1990779,000188,GPIb_IX_V +HGNC_GROUP,1149,000499,ETC_complex_I_core +HGNC_GROUP,1150,000500,ETC_complex_I_supernumerary +HGNC_GROUP,581,000061,Augmin +HGNC_GROUP,640,000501,ETC_complex_I +HGNC_GROUP,641,000502,ETC_complex_II +HGNC_GROUP,642,000503,ETC_complex_III +HGNC_GROUP,643,000504,ETC_complex_IV +HGNC_GROUP,644,000505,ETC_complex_V +IP,IPR000074,000052,Apolipoprotein +IP,IPR000096,000428,SAA +IP,IPR000162,000193,GRM +IP,IPR000164,000237,Histone_H3 +IP,IPR000239,000192,GRK +IP,IPR000308,000323,p14_3_3 +IP,IPR000320,000226,Hedgehog +IP,IPR000381,000013,Activin_B +IP,IPR000388,000456,Sulfonylurea_receptor +IP,IPR000406,000415,RhoGDI +IP,IPR000451,000311,NFkappaB +IP,IPR000454,000059,ATP5G +IP,IPR000469,000207,G_12 +IP,IPR000469,000208,G_12_alpha +IP,IPR000491,000011,Activin_A +IP,IPR000654,000215,G_q +IP,IPR000654,000216,G_q_alpha +IP,IPR000741,000025,ALDO +IP,IPR000751,000091,CDC25 +IP,IPR000756,000140,DGK +IP,IPR000889,000190,GPX +IP,IPR000929,000143,DRD +IP,IPR000941,000157,ENO +IP,IPR000995,000102,CHRM +IP,IPR000997,000101,Cholinesterase +IP,IPR001090,000158,Ephrin_receptor +IP,IPR001132,000441,SMAD +IP,IPR001154,000476,TOP2 +IP,IPR001208,000284,MCM +IP,IPR001217,000453,STAT +IP,IPR001241,000476,TOP2 +IP,IPR001349,000115,COX6A +IP,IPR001370,000066,BIRC +IP,IPR001408,000212,G_i +IP,IPR001408,000213,G_i_alpha +IP,IPR001426,000158,Ephrin_receptor +IP,IPR001429,000324,P2RX +IP,IPR001442,000110,COL4 +IP,IPR001522,000429,SCD +IP,IPR001612,000083,CAV +IP,IPR001657,000226,Hedgehog +IP,IPR001767,000226,Hedgehog +IP,IPR001770,000211,G_gamma +IP,IPR001928,000149,EDN +IP,IPR001951,000238,Histone_H4 +IP,IPR002051,000240,HMOX +IP,IPR002112,000268,JUN_family +IP,IPR002117,000327,p53_family +IP,IPR002138,000081,Caspase +IP,IPR002194,000085,CCT_complex +IP,IPR002205,000476,TOP2 +IP,IPR002209,000167,FGF +IP,IPR002374,000391,PRKG +IP,IPR002453,000484,TUBB +IP,IPR002454,000485,TUBG +IP,IPR002655,000007,ACOX +IP,IPR002717,000300,MYST +IP,IPR003000,000223,HDAC_III +IP,IPR003074,000375,PPAR +IP,IPR003084,000220,HDAC +IP,IPR003084,000221,HDAC_I +IP,IPR003113,000359,PI3K_p110 +IP,IPR003175,000095,CDKN1 +IP,IPR003205,000119,COX8 +IP,IPR003367,000467,THBS +IP,IPR003502,000252,IL1 +IP,IPR003586,000226,Hedgehog +IP,IPR003587,000226,Hedgehog +IP,IPR004000,000009,Actin +IP,IPR004030,000316,NOS +IP,IPR004061,000427,S1PR +IP,IPR004142,000307,NDRG +IP,IPR004171,000365,PKI +IP,IPR004203,000114,COX4 +IP,IPR004241,000280,MAP1LC3 +IP,IPR004766,000333,Patched +IP,IPR004826,000279,MAF +IP,IPR004979,000463,TFAP2 +IP,IPR005455,000355,PFN +IP,IPR005542,000334,PBX +IP,IPR005643,000268,JUN_family +IP,IPR005782,000430,SERCA +IP,IPR005817,000497,Wnt +IP,IPR006019,000432,SHC +IP,IPR006338,000488,TXNRD +IP,IPR006828,000045,AMPK_beta +IP,IPR008297,000317,Notch +IP,IPR008349,000161,ERK +IP,IPR008351,000267,JNK +IP,IPR008352,000326,p38 +IP,IPR008366,000309,NFAT +IP,IPR008433,000118,COX7B +IP,IPR008606,000154,EIF4EBP +IP,IPR008631,000206,GYS +IP,IPR008859,000467,THBS +IP,IPR009045,000226,Hedgehog +IP,IPR009123,000138,Desmoglein +IP,IPR010011,000305,NCOA +IP,IPR010660,000317,Notch +IP,IPR010991,000327,p53_family +IP,IPR011039,000197,GTF2F +IP,IPR011615,000327,p53_family +IP,IPR011656,000317,Notch +IP,IPR012144,000316,NOS +IP,IPR012198,000390,PRKAR +IP,IPR012233,000364,PKC +IP,IPR012290,000169,Fibrinogen +IP,IPR012345,000453,STAT +IP,IPR012542,000476,TOP2 +IP,IPR013019,000441,SMAD +IP,IPR013288,000114,COX4 +IP,IPR013506,000476,TOP2 +IP,IPR013537,000005,ACC +IP,IPR013543,000077,CAMK2_complex +IP,IPR013543,000078,CAMK2_family +IP,IPR013558,000460,TCF_LEF +IP,IPR013706,000336,PDE1 +IP,IPR013757,000476,TOP2 +IP,IPR013758,000476,TOP2 +IP,IPR013759,000476,TOP2 +IP,IPR013760,000476,TOP2 +IP,IPR013790,000441,SMAD +IP,IPR013799,000453,STAT +IP,IPR013800,000453,STAT +IP,IPR013801,000453,STAT +IP,IPR013854,000463,TFAP2 +IP,IPR013871,000121,CRISP +IP,IPR014788,000101,Cholinesterase +IP,IPR014920,000305,NCOA +IP,IPR014935,000305,NCOA +IP,IPR014936,000062,AXIN +IP,IPR015008,000419,ROCK +IP,IPR015015,000003,ABL_family +IP,IPR015451,000132,Cyclin_D +IP,IPR015583,000349,PDGF_BB +IP,IPR015588,000247,IFNB +IP,IPR015615,000465,TGFB +IP,IPR015633,000147,E2F +IP,IPR015679,000373,PLD +IP,IPR015876,000429,SCD +IP,IPR015988,000453,STAT +IP,IPR016053,000240,HMOX +IP,IPR016072,000084,CBF3 +IP,IPR016084,000240,HMOX +IP,IPR016239,000329,P90RSK +IP,IPR016245,000160,ERBB +IP,IPR016246,000260,INSR +IP,IPR016247,000420,ROR +IP,IPR016248,000168,FGFR +IP,IPR016251,000266,JAK +IP,IPR016257,000158,Ephrin_receptor +IP,IPR016279,000372,PLCG +IP,IPR016280,000370,PLCB +IP,IPR016311,000163,ETS +IP,IPR016319,000465,TGFB +IP,IPR016346,000210,G_beta +IP,IPR016897,000084,CBF3 +IP,IPR017104,000049,AP2A +IP,IPR017348,000362,PIM +IP,IPR017426,000305,NCOA +IP,IPR017897,000467,THBS +IP,IPR017904,000107,Cofilin +IP,IPR018161,000497,Wnt +IP,IPR018207,000240,HMOX +IP,IPR018361,000083,CAV +IP,IPR018507,000115,COX6A +IP,IPR018522,000476,TOP2 +IP,IPR019764,000149,EDN +IP,IPR020475,000149,EDN +IP,IPR020537,000059,ATP5G +IP,IPR020684,000419,ROCK +IP,IPR020777,000321,NTRK +IP,IPR020810,000157,ENO +IP,IPR020811,000157,ENO +IP,IPR022684,000079,CAPN +IP,IPR023272,000118,COX7B +IP,IPR023337,000449,SPRED +IP,IPR023409,000323,p14_3_3 +IP,IPR023410,000323,p14_3_3 +IP,IPR024940,000460,TCF_LEF +IP,IPR024946,000476,TOP2 +IP,IPR025561,000272,KSR +IP,IPR026590,000223,HDAC_III +IP,IPR027288,000346,PDGFR_BB +IP,IPR027290,000344,PDGFR_AA +IP,IPR027309,000324,P2RX +IP,IPR027705,000170,FLOT +IP,IPR027707,000480,Troponin_T +IP,IPR027936,000158,Ephrin_receptor +IP,IPR028412,000400,RAL +IP,IPR028433,000332,PARV +IP,IPR028858,000133,Cyclin_E +IP,IPR028974,000467,THBS +IP,IPR028992,000226,Hedgehog +IP,IPR029760,000190,GPX +IP,IPR029768,000025,ALDO +IP,IPR030492,000311,NFkappaB +IP,IPR031327,000284,MCM +IP,IPR031635,000321,NTRK +IP,IPR031660,000476,TOP2 +IP,IPR031675,000377,PPP1C +IP,IPR031905,000170,FLOT +IP,IPR032067,000174,FOXO +IP,IPR032101,000062,AXIN +IP,IPR032270,000044,AMPK_alpha +IP,IPR032640,000045,AMPK_beta +IP,IPR033139,000081,Caspase +IP,IPR033614,000410,RASSF +IP,IPR033896,000285,MEF2 +IP,IPR033923,000330,PAK +IP,IPR033926,000311,NFkappaB +IP,IPR034117,000121,CRISP +IP,IPR034157,000476,TOP2 +IP,IPR035014,000391,PRKG +IP,IPR035023,000372,PLCG +IP,IPR035024,000372,PLCG +MEDSCAN,urn:agi-aopfc:0000094,000120,CREB +MEDSCAN,urn:agi-aopfc:0000099,000147,E2F +MEDSCAN,urn:agi-aopfc:0000105,000184,GATA +MEDSCAN,urn:agi-aopfc:0000142,000279,MAF +MEDSCAN,urn:agi-aopfc:0000143,000285,MEF2 +MEDSCAN,urn:agi-aopfc:0000150,000310,NFE +MEDSCAN,urn:agi-aopfc:0000156,000311,NFkappaB +MEDSCAN,urn:agi-aopfc:0000157,000412,RFX +MEDSCAN,urn:agi-aopfc:0000159,000441,SMAD +MEDSCAN,urn:agi-aopfc:0000163,000453,STAT +MEDSCAN,urn:agi-aopfc:0000197,000177,FZD +MEDSCAN,urn:agi-aopfc:0000252,000136,DDR +MEDSCAN,urn:agi-aopfc:0000264,000260,INSR +MEDSCAN,urn:agi-aopfc:0000278,000321,NTRK +MEDSCAN,urn:agi-aopfc:0000279,000317,Notch +MEDSCAN,urn:agi-aopfc:0000281,000333,Patched +MEDSCAN,urn:agi-aopfc:0000286,000420,ROR +MEDSCAN,urn:agi-aopfc:0000294,000466,TGFBR +MEDSCAN,urn:agi-aopfc:0000295,000475,TNFRSF +MEDSCAN,urn:agi-aopfc:0000296,000472,TLR +MEDSCAN,urn:agi-aopfc:0000311,000187,GPCR +MEDSCAN,urn:agi-aopfc:0000391,000099,Chemokine +MEDSCAN,urn:agi-aopfc:0000423,000465,TGFB +MEDSCAN,urn:agi-aopfc:0000426,000497,Wnt +MEDSCAN,urn:agi-aopfc:0000434,000194,GSK3 +MEDSCAN,urn:agi-aopfc:0000439,000023,AKT +MEDSCAN,urn:agi-aopfc:0000447,000358,PI3K +MEDSCAN,urn:agi-aopfc:0000452,000075,CALM +MEDSCAN,urn:agi-aopfc:0000455,000366,PLA2 +MEDSCAN,urn:agi-aopfc:0000458,000161,ERK +MEDSCAN,urn:agi-aopfc:0000462,000286,MEK +MEDSCAN,urn:agi-aopfc:0000464,000266,JAK +MEDSCAN,urn:agi-aopfc:0000465,000404,RAS +MEDSCAN,urn:agi-aopfc:0000468,000330,PAK +MEDSCAN,urn:agi-aopfc:0000473,000267,JNK +MEDSCAN,urn:agi-aopfc:0000477,000326,p38 +MEDSCAN,urn:agi-aopfc:0000479,000302,NADPH_oxidase +MEDSCAN,urn:agi-aopfc:0000494,000316,NOS +MEDSCAN,urn:agi-aopfc:0000499,000414,RHO +MEDSCAN,urn:agi-aopfc:0000504,000494,VAV +MEDSCAN,urn:agi-aopfc:0000509,000451,SRC +MEDSCAN,urn:agi-aopfc:0000551,000091,CDC25 +MEDSCAN,urn:agi-aopfc:0000567,000003,ABL_family +MEDSCAN,urn:agi-aopfc:0000571,000050,APC_C +MEDSCAN,urn:agi-aopfc:0000585,000264,IRS +MEDSCAN,urn:agi-aopfc:0000586,000248,IGFBP +MEDSCAN,urn:agi-aopfc:0000587,000226,Hedgehog +MEDSCAN,urn:agi-aopfc:0000615,000252,IL1 +MEDSCAN,urn:agi-aopfc:0000704,000339,PDE6 +MEDSCAN,urn:agi-complex:CaM%20kinase%20II,000077,CAMK2_complex +MEDSCAN,urn:agi-complex:CD3%20complex,000087,CD3 +MEDSCAN,urn:agi-complex:CD8,000090,CD8 +MEDSCAN,urn:agi-complex:HIF-1,000230,HIF1 +MEDSCAN,urn:agi-complex:IFNGR,000263,Interferon_gamma_receptor +MEDSCAN,urn:agi-complex:IKK%20complex,000250,IKK_complex +MEDSCAN,urn:agi-complex:IL12,000253,IL12 +MEDSCAN,urn:agi-complex:inhibin%20A,000257,Inhibin_A +MEDSCAN,urn:agi-complex:Luteinizing%20hormone,000276,LH +MEDSCAN,urn:agi-complex:MAC-1%20(integrin),000261,Integrins +MEDSCAN,urn:agi-complex:NF-E2,000310,NFE +MEDSCAN,urn:agi-complex:platelet%20derived%20growth%20factor%20AA,000347,PDGF_AA +MEDSCAN,urn:agi-complex:platelet%20derived%20growth%20factor%20AB,000348,PDGF_AB +MEDSCAN,urn:agi-complex:platelet%20derived%20growth%20factor%20BB,000349,PDGF_BB +MEDSCAN,urn:agi-complex:prophash-047b61fab6d7e7445346cc84dafcb267,000177,FZD +MEDSCAN,urn:agi-complex:prophash-0d528c29d63997f87f62e4fbd9f0b168,000294,mTORC2 +MEDSCAN,urn:agi-complex:prophash-0f8242e28423189d7ef714808fdcc121,000233,Histone +MEDSCAN,urn:agi-complex:prophash-285b9ff3749679e4d6266406a20973aa,000358,PI3K +MEDSCAN,urn:agi-complex:prophash-2b612daa76feb2db86ff39e70449df6b,000387,PRC2_complex +MEDSCAN,urn:agi-complex:prophash-2de597c3f4a807f3caeaf02e5f93ce15,000453,STAT +MEDSCAN,urn:agi-complex:prophash-40bc2e4348830d6f7bdacd573fd7c388,000147,E2F +MEDSCAN,urn:agi-complex:prophash-44f61960049704dc2afb23ff7c324b85,000230,HIF1 +MEDSCAN,urn:agi-complex:prophash-4dda466320b1a32b046d823accadbaee,000092,CDK +MEDSCAN,urn:agi-complex:prophash-50bd08479c3770278693a51fe379babd,000490,Ubiquitin +MEDSCAN,urn:agi-complex:prophash-72ef5fc0ab431a39e0e2915bf55b6e28,000441,SMAD +MEDSCAN,urn:agi-complex:prophash-7629c2cdfdf4908b72f13917a7c1551e,000411,RFC +MEDSCAN,urn:agi-complex:prophash-763d31b31e177311583df0ac1ea015da,000187,GPCR +MEDSCAN,urn:agi-complex:prophash-7e8823afb9ca7870b95633dcb782500b,000220,HDAC +MEDSCAN,urn:agi-complex:prophash-8a9e47ee0ee03d8d8b6e029e2fba6896,000074,Cadherin +MEDSCAN,urn:agi-complex:prophash-8cfce9bfac3857e6f068d517deadfeaa,000311,NFkappaB +MEDSCAN,urn:agi-complex:prophash-8d885376e30916afd0b47ccf1b044e75,000268,JUN_family +MEDSCAN,urn:agi-complex:prophash-90a087d4e73b3992c65edfd9f71c6802,000486,Tubulin +MEDSCAN,urn:agi-complex:prophash-9e456bf1de2c5eb1107156c96a1450e6,000466,TGFBR +MEDSCAN,urn:agi-complex:prophash-aba0c4130764ae7a26054736114e65cd,000386,PRC1_complex +MEDSCAN,urn:agi-complex:prophash-bd459ca2937257c9e3f2b75abf22f422,000424,RXR +MEDSCAN,urn:agi-complex:prophash-c3bac0781a4430da4cf6721b8f7537d9,000127,CUL +MEDSCAN,urn:agi-complex:prophash-cd6413d79122d5489ee4b4e339245b61,000085,CCT_complex +MEDSCAN,urn:agi-complex:prophash-d39afef40daf23ad8376b53904c7092c,000376,PPP1 +MEDSCAN,urn:agi-complex:prophash-d9fbae788d60df23b6be4a3ead2cbab4,000417,RNApo_II +MEDSCAN,urn:agi-complex:prophash-dd63d0a558770b12c9149b4955828f35,000050,APC_C +MEDSCAN,urn:agi-complex:prophash-e4ec238e69c3d3292966ac97dbc11086,000477,Troponin +MEDSCAN,urn:agi-complex:prophash-e6be10f6a8e79aed1daa4ec2ac191db1,000284,MCM +MEDSCAN,urn:agi-complex:prophash-e9fbfd73e486bda4d99b348f72bb4196,000204,GTPase +MEDSCAN,urn:agi-complex:prophash-f2e03d3bf1f747adab17ce77b9b5e5b3,000379,PPP2 +MEDSCAN,urn:agi-complex:prophash-f472fef3f59301aee0b776702a30f03e,000293,mTORC1 +MEDSCAN,urn:agi-complex:prophash-f7a9dc05e48afd7a93466cfbd5504861,000457,SWI_SNF +MEDSCAN,urn:agi-complex:prophash-f7e292d6e30998b81cf5f772ab430f11,000075,CALM +MEDSCAN,urn:agi-complex:protein%20phosphatase%203,000383,PPP3 +MEDSCAN,urn:agi-complex:protein%20phosphatase%20type%201%20complex,000376,PPP1 +MEDSCAN,urn:agi-complex:protein%20phosphatase%20type%202A%20complex,000379,PPP2 +MEDSCAN,urn:agi-complex:SMAD2%2f3,000443,SMAD2_3 +MEDSCAN,urn:agi-protfc:14-3-3,000323,p14_3_3 +MEDSCAN,urn:agi-protfc:actins,000009,Actin +MEDSCAN,urn:agi-protfc:AMPK,000031,AMPK +MEDSCAN,urn:agi-protfc:apolipoprotein,000052,Apolipoprotein +MEDSCAN,urn:agi-protfc:bone%20morphogenetic%20protein%20I%20receptor,000069,BMP_receptor_type_I +MEDSCAN,urn:agi-protfc:cadherin,000074,Cadherin +MEDSCAN,urn:agi-protfc:casein%20kinase%20I,000124,CSNK1 +MEDSCAN,urn:agi-protfc:caveolin,000083,CAV +MEDSCAN,urn:agi-protfc:checkpoint%20kinase,000098,CHEK +MEDSCAN,urn:agi-protfc:chromatin%20remodeling%20complex,000457,SWI_SNF +MEDSCAN,urn:agi-protfc:class%20c%20orphan%20receptor,000187,GPCR +MEDSCAN,urn:agi-protfc:cullin,000127,CUL +MEDSCAN,urn:agi-protfc:cyclin,000130,Cyclin +MEDSCAN,urn:agi-protfc:cyclophilins,000134,Cyclophilin +MEDSCAN,urn:agi-protfc:cytosolic%20phospholipase%20a2,000366,PLA2 +MEDSCAN,urn:agi-protfc:desmoglein,000138,Desmoglein +MEDSCAN,urn:agi-protfc:endothelin,000149,EDN +MEDSCAN,urn:agi-protfc:F-actin-binding%20protein,000178,F_actin +MEDSCAN,urn:agi-protfc:flotillin,000170,FLOT +MEDSCAN,urn:agi-protfc:hemoglobin,000227,Hemoglobin +MEDSCAN,urn:agi-protfc:histone%20H1,000234,Histone_H1 +MEDSCAN,urn:agi-protfc:histone%20H2A,000235,Histone_H2A +MEDSCAN,urn:agi-protfc:histone%20H2B,000236,Histone_H2B +MEDSCAN,urn:agi-protfc:histone%20H3,000237,Histone_H3 +MEDSCAN,urn:agi-protfc:histone%20H4,000238,Histone_H4 +MEDSCAN,urn:agi-protfc:histone,000233,Histone +MEDSCAN,urn:agi-protfc:interferon,000262,Interferon +MEDSCAN,urn:agi-protfc:kallikrein,000271,KLK +MEDSCAN,urn:agi-protfc:mglur,000193,GRM +MEDSCAN,urn:agi-protfc:myosin%20heavy%20chain,000295,MYH +MEDSCAN,urn:agi-protfc:myosin%20light%20chain,000296,MYL +MEDSCAN,urn:agi-protfc:neuregulin%20family,000318,NRG +MEDSCAN,urn:agi-protfc:p2y%20receptor,000325,P2RY +MEDSCAN,urn:agi-protfc:p70rsk,000328,P70S6K +MEDSCAN,urn:agi-protfc:p90rsk,000329,P90RSK +MEDSCAN,urn:agi-protfc:PDE4%20subfamily,000338,PDE4 +MEDSCAN,urn:agi-protfc:phosphodiesterase%20III,000337,PDE3 +MEDSCAN,urn:agi-protfc:ppar,000375,PPAR +MEDSCAN,urn:agi-protfc:profilin,000355,PFN +MEDSCAN,urn:agi-protfc:rab,000397,RAB +MEDSCAN,urn:agi-protfc:sarcoplasmic%20reticulum%20calcium%20transporting%20adenosine%20triphosphatase,000430,SERCA +MEDSCAN,urn:agi-protfc:shc%20protein,000432,SHC +MEDSCAN,urn:agi-protfc:STAT5%20protein,000454,STAT5 +MEDSCAN,urn:agi-protfc:sterol%20regulatory%20element%20binding%20protein,000452,SREBF +MEDSCAN,urn:agi-protfc:SWI%2fSNF%20family,000457,SWI_SNF +MEDSCAN,urn:agi-protfc:thioredoxin,000487,TXN +MEDSCAN,urn:agi-protfc:thrombospondins,000467,THBS +MEDSCAN,urn:agi-protfc:tubulin,000486,Tubulin +MEDSCAN,urn:agi-protfc:ubiquitin,000490,Ubiquitin +MESH,C072194,000349,PDGF_BB +MESH,D000199,000009,Actin +MESH,D003576,000504,ETC_complex_IV +MESH,D006657,000233,Histone +MESH,D010749,000357,Phosphatase +MESH,D011493,000364,PKC +MESH,D011948,000461,TCR +MESH,D014450,000503,ETC_complex_III +MESH,D016695,000198,Glycosyltransferase +MESH,D018808,000048,AP1 +MESH,D018844,000092,CDK +MESH,D020169,000081,Caspase +MESH,D025261,000505,ETC_complex_V +MESH,D042963,000502,ETC_complex_II +MESH,D042967,000501,ETC_complex_I +MESH,D046988,000394,Proteasome +NCIT,C104194,000132,Cyclin_D +NCIT,C104197,000133,Cyclin_E +NCIT,C104199,000251,IKK_family +NCIT,C104676,000473,TN +NCIT,C105947,000281,MAP2K +NCIT,C105952,000051,APOA +NCIT,C107433,000338,PDE4 +NCIT,C107559,000104,CK2 +NCIT,C112049,000502,ETC_complex_II +NCIT,C112051,000080,Carboxylesterase +NCIT,C113839,000229,HIF +NCIT,C116019,000044,AMPK_alpha +NCIT,C118184,000501,ETC_complex_I +NCIT,C118481,000024,ALDH +NCIT,C118892,000174,FOXO +NCIT,C120030,000481,Tryptase +NCIT,C120493,000226,Hedgehog +NCIT,C124129,000109,COL1 +NCIT,C126114,000372,PLCG +NCIT,C126122,000188,GPIb_IX_V +NCIT,C129655,000484,TUBB +NCIT,C16258,000009,Actin +NCIT,C16264,000017,ADCY +NCIT,C16272,000018,ADH +NCIT,C16373,000074,Cadherin +NCIT,C16375,000075,CALM +NCIT,C16376,000161,ERK +NCIT,C16376,000283,MAPK +NCIT,C16377,000079,CAPN +NCIT,C16448,000110,COL4 +NCIT,C16479,000363,PKA +NCIT,C16511,000141,DNA_polymerase_delta +NCIT,C16641,000195,GST +NCIT,C16650,000204,GTPase +NCIT,C16653,000205,GUCY +NCIT,C16676,000227,Hemoglobin +NCIT,C16682,000220,HDAC +NCIT,C16683,000234,Histone_H1 +NCIT,C16684,000235,Histone_H2A +NCIT,C16685,000237,Histone_H3 +NCIT,C16686,000238,Histone_H4 +NCIT,C16687,000233,Histone +NCIT,C16692,000239,HLA_DR +NCIT,C16748,000261,Integrins +NCIT,C16965,000393,Protease +NCIT,C16979,000366,PLA2 +NCIT,C16981,000357,Phosphatase +NCIT,C17017,000364,PKC +NCIT,C17061,000404,RAS +NCIT,C17062,000021,ADRB +NCIT,C17065,000461,TCR +NCIT,C17066,000143,DRD +NCIT,C17078,000468,THR +NCIT,C17219,000486,Tubulin +NCIT,C17227,000490,Ubiquitin +NCIT,C17270,000358,PI3K +NCIT,C17274,000067,BMP +NCIT,C17286,000120,CREB +NCIT,C17293,000496,VEGFR +NCIT,C17297,000168,FGFR +NCIT,C17298,000182,GAP +NCIT,C17322,000343,PDGFR +NCIT,C17343,000479,Troponin_I +NCIT,C17349,000130,Cyclin +NCIT,C17380,000311,NFkappaB +NCIT,C17450,000048,AP1 +NCIT,C17458,000214,G_protein +NCIT,C17487,000086,CD16 +NCIT,C17494,000186,GEF +NCIT,C17532,000403,RAR +NCIT,C17534,000424,RXR +NCIT,C17583,000249,IKB +NCIT,C17660,000423,RTK +NCIT,C17690,000230,HIF1 +NCIT,C17763,000160,ERBB +NCIT,C17766,000241,HSP90 +NCIT,C17767,000092,CDK +NCIT,C17903,000309,NFAT +NCIT,C18153,000081,Caspase +NCIT,C18162,000152,EIF2B +NCIT,C18164,000291,MMP +NCIT,C18239,000187,GPCR +NCIT,C18308,000088,CD32 +NCIT,C18434,000476,TOP2 +NCIT,C18492,000094,CDKN +NCIT,C18606,000158,Ephrin_receptor +NCIT,C19275,000213,G_i_alpha +NCIT,C19618,000453,STAT +NCIT,C19836,000368,PLA2G4 +NCIT,C19866,000386,PRC1_complex +NCIT,C20448,000342,PDGF +NCIT,C129646,000495,VEGF +NCIT,C20456,000010,Activin +NCIT,C20466,000099,Chemokine +NCIT,C20493,000262,Interferon +NCIT,C20495,000247,IFNB +NCIT,C20506,000252,IL1 +NCIT,C20514,000253,IL12 +NCIT,C20591,000457,SWI_SNF +NCIT,C2275,000219,hCG +NCIT,C2276,000256,Inhibin +NCIT,C2277,000257,Inhibin_A +NCIT,C2278,000258,Inhibin_B +NCIT,C25184,000275,LDH +NCIT,C25186,000225,HDL +NCIT,C26034,000504,ETC_complex_IV +NCIT,C26233,000192,GRK +NCIT,C26360,000161,ERK +NCIT,C28687,000122,CRSP +NCIT,C38041,000480,Troponin_T +NCIT,C38897,000087,CD3 +NCIT,C41625,000023,AKT +NCIT,C736,000354,Pertussis_toxin +NCIT,C94701,000031,AMPK +NCIT,C95114,000181,Gamma_secretase +NCIT,C95947,000416,RNApo_I +NCIT,C95948,000417,RNApo_II +NCIT,C96314,000293,mTORC1 +NCIT,C96315,000294,mTORC2 +NXP,FA:00078,000009,Actin +NXP,FA:00093,000004,ACAD +NXP,FA:00209,000463,TFAP2 +NXP,FA:00406,000097,CEBP +NXP,FA:00408,000173,FOS_family +NXP,FA:00421,000385,PPP3R +NXP,FA:00440,000075,CALM +NXP,FA:00489,000083,CAV +NXP,FA:00653,000106,CNKSR +NXP,FA:00787,000127,CUL +NXP,FA:00803,000337,PDE3 +NXP,FA:00804,000338,PDE4 +NXP,FA:00815,000130,Cyclin +NXP,FA:00818,000132,Cyclin_D +NXP,FA:00819,000133,Cyclin_E +NXP,FA:00921,000153,EIF4A +NXP,FA:01112,000157,ENO +NXP,FA:01121,000159,EPN +NXP,FA:01400,000211,G_gamma +NXP,FA:01553,000190,GPX +NXP,FA:01669,000195,GST +NXP,FA:01729,000226,Hedgehog +NXP,FA:01762,000235,Histone_H2A +NXP,FA:01764,000237,Histone_H3 +NXP,FA:01765,000238,Histone_H4 +NXP,FA:01820,000252,IL1 +NXP,FA:01869,000259,INS +NXP,FA:02022,000275,LDH +NXP,FA:02159,000434,SLC2A +NXP,FA:02187,000284,MCM +NXP,FA:02504,000316,NOS +NXP,FA:02506,000317,Notch +NXP,FA:02630,000324,P2RX +NXP,FA:02632,000327,p53_family +NXP,FA:02660,000332,PARV +NXP,FA:02762,000156,ELA +NXP,FA:02767,000481,Tryptase +NXP,FA:02840,000366,PLA2 +NXP,FA:03001,000376,PPP1 +NXP,FA:03065,000364,PKC +NXP,FA:03066,000398,RAC +NXP,FA:03071,000031,AMPK +NXP,FA:03072,000076,CAMK +NXP,FA:03078,000362,PIM +NXP,FA:03083,000124,CSNK1 +NXP,FA:03087,000194,GSK3 +NXP,FA:03091,000146,DYRK +NXP,FA:03101,000104,CK2 +NXP,FA:03104,000251,IKK_family +NXP,FA:03114,000399,RAF +NXP,FA:03124,000158,Ephrin_receptor +NXP,FA:03128,000260,INSR +NXP,FA:03129,000266,JAK +NXP,FA:03130,000420,ROR +NXP,FA:03131,000451,SRC +NXP,FA:03483,000428,SAA +NXP,FA:03579,000431,SERPINB +NXP,FA:03661,000397,RAB +NXP,FA:03663,000404,RAS +NXP,FA:03668,000414,RHO +NXP,FA:03672,000435,SLRP +NXP,FA:03673,000436,SLRP_1 +NXP,FA:03674,000437,SLRP_2 +NXP,FA:03675,000438,SLRP_3 +NXP,FA:03676,000439,SLRP_4 +NXP,FA:03677,000440,SLRP_5 +NXP,FA:03686,000444,SMC1 +NXP,FA:03943,000460,TCF_LEF +NXP,FA:03964,000473,TN +NXP,FA:03989,000465,TGFB +NXP,FA:04000,000487,TXN +NXP,FA:04014,000470,TIAM +NXP,FA:04239,000486,Tubulin +NXP,FA:04243,000474,TNF +NXP,FA:04276,000490,Ubiquitin +NXP,FA:04282,000489,UBE2 +NXP,FA:04686,000497,Wnt +NXP,FA:04773,000401,RAP1 +PF,PF00012,000244,HSPA +PF,PF00022,000009,Actin +PF,PF00028,000074,Cadherin +PF,PF00066,000317,Notch +PF,PF00071,000404,RAS +PF,PF00110,000497,Wnt +PF,PF00143,000262,Interferon +PF,PF00146,000301,NADH_dehydrogenase +PF,PF00167,000167,FGF +PF,PF00178,000163,ETS +PF,PF00183,000241,HSP90 +PF,PF00219,000248,IGFBP +PF,PF00229,000474,TNF +PF,PF00235,000355,PFN +PF,PF00244,000323,p14_3_3 +PF,PF00255,000190,GPX +PF,PF00277,000428,SAA +PF,PF00320,000184,GATA +PF,PF00322,000149,EDN +PF,PF00340,000252,IL1 +PF,PF00465,000018,ADH +PF,PF00493,000284,MCM +PF,PF00503,000209,G_alpha +PF,PF00616,000407,RasGAP +PF,PF00644,000331,PARP +PF,PF00656,000081,Caspase +PF,PF00864,000324,P2RX +PF,PF00870,000327,p53_family +PF,PF00888,000127,CUL +PF,PF00963,000108,Cohesin +PF,PF01146,000083,CAV +PF,PF01442,000052,Apolipoprotein +PF,PF01534,000177,FZD +PF,PF01756,000007,ACOX +PF,PF02046,000115,COX6A +PF,PF02158,000318,NRG +PF,PF02174,000264,IRS +PF,PF02234,000094,CDKN +PF,PF02238,000117,COX7A +PF,PF02285,000119,COX8 +PF,PF02297,000116,COX6B +PF,PF02377,000145,DVL +PF,PF02460,000333,Patched +PF,PF02545,000279,MAF +PF,PF02608,000067,BMP +PF,PF02827,000365,PKI +PF,PF02854,000155,EIF4G +PF,PF02936,000114,COX4 +PF,PF03039,000253,IL12 +PF,PF03096,000307,NDRG +PF,PF05392,000118,COX7B +PF,PF08137,000145,DVL +PF,PF08562,000121,CRISP +PF,PF08841,000136,DDR +PF,PF11413,000230,HIF1 +PF,PF12483,000148,E3_Ub_ligase +PF,PF15975,000170,FLOT +RE,R-HSA-1031694,000089,CD64 +RE,R-HSA-109631,000197,GTF2F +RE,R-HSA-109633,000196,GTF2E +RE,R-HSA-109782,000404,RAS +RE,R-HSA-109783,000404,RAS +RE,R-HSA-109796,000404,RAS +RE,R-HSA-111854,000370,PLCB +RE,R-HSA-111864,000212,G_i +RE,R-HSA-111864,000213,G_i_alpha +RE,R-HSA-111921,000390,PRKAR +RE,R-HSA-111923,000390,PRKAR +RE,R-HSA-111952,000336,PDE1 +RE,R-HSA-111953,000336,PDE1 +RE,R-HSA-111960,000338,PDE4 +RE,R-HSA-114525,000208,G_12_alpha +RE,R-HSA-114534,000215,G_q +RE,R-HSA-114534,000216,G_q_alpha +RE,R-HSA-114547,000207,G_12 +RE,R-HSA-114556,000215,G_q +RE,R-HSA-114556,000216,G_q_alpha +RE,R-HSA-114617,000169,Fibrinogen +RE,R-HSA-114618,000169,Fibrinogen +RE,R-HSA-114657,000465,TGFB +RE,R-HSA-114668,000188,GPIb_IX_V +RE,R-HSA-1168365,000372,PLCG +RE,R-HSA-1168621,000250,IKK_complex +RE,R-HSA-1169086,000372,PLCG +RE,R-HSA-1169089,000372,PLCG +RE,R-HSA-1218829,000243,HSP90AA +RE,R-HSA-1221657,000243,HSP90AA +RE,R-HSA-1227956,000319,NRG_1_2 +RE,R-HSA-1227957,000318,NRG +RE,R-HSA-1234130,000229,HIF +RE,R-HSA-1234147,000231,HIF_alpha +RE,R-HSA-1236898,000089,CD64 +RE,R-HSA-1236905,000089,CD64 +RE,R-HSA-1247495,000319,NRG_1_2 +RE,R-HSA-1248743,000319,NRG_1_2 +RE,R-HSA-1250100,000326,p38 +RE,R-HSA-1250102,000326,p38 +RE,R-HSA-1268261,000161,ERK +RE,R-HSA-1362227,000464,TFDP +RE,R-HSA-139848,000324,P2RX +RE,R-HSA-139933,000169,Fibrinogen +RE,R-HSA-139934,000169,Fibrinogen +RE,R-HSA-140586,000169,Fibrinogen +RE,R-HSA-140812,000469,Thrombin_antithrombin +RE,R-HSA-140871,000469,Thrombin_antithrombin +RE,R-HSA-140874,000469,Thrombin_antithrombin +RE,R-HSA-140919,000169,Fibrinogen +RE,R-HSA-1445138,000323,p14_3_3 +RE,R-HSA-1449672,000013,Activin_B +RE,R-HSA-1449688,000256,Inhibin +RE,R-HSA-1449698,000012,Activin_AB +RE,R-HSA-1469978,000454,STAT5 +RE,R-HSA-1504201,000145,DVL +RE,R-HSA-157462,000133,Cyclin_E +RE,R-HSA-162690,000189,GPIT +RE,R-HSA-163538,000377,PPP1C +RE,R-HSA-163679,000042,AMPK_A2B2G2 +RE,R-HSA-163736,000042,AMPK_A2B2G2 +RE,R-HSA-163747,000042,AMPK_A2B2G2 +RE,R-HSA-165175,000482,TSC +RE,R-HSA-165180,000482,TSC +RE,R-HSA-1655720,000452,SREBF +RE,R-HSA-1655725,000452,SREBF +RE,R-HSA-1655726,000452,SREBF +RE,R-HSA-1655730,000452,SREBF +RE,R-HSA-1655732,000452,SREBF +RE,R-HSA-1655734,000452,SREBF +RE,R-HSA-165631,000502,ETC_complex_II +RE,R-HSA-165990,000381,PPP2R_A +RE,R-HSA-165997,000381,PPP2R_A +RE,R-HSA-167023,000432,SHC +RE,R-HSA-167204,000404,RAS +RE,R-HSA-167215,000448,SOS +RE,R-HSA-167409,000210,G_beta +RE,R-HSA-167410,000212,G_i +RE,R-HSA-167410,000213,G_i_alpha +RE,R-HSA-167413,000212,G_i +RE,R-HSA-167413,000213,G_i_alpha +RE,R-HSA-167438,000212,G_i +RE,R-HSA-167438,000213,G_i_alpha +RE,R-HSA-167442,000211,G_gamma +RE,R-HSA-1678828,000155,EIF4G +RE,R-HSA-168113,000250,IKK_complex +RE,R-HSA-169289,000161,ERK +RE,R-HSA-169291,000161,ERK +RE,R-HSA-170089,000131,Cyclin_A +RE,R-HSA-170108,000091,CDC25 +RE,R-HSA-170994,000400,RAL +RE,R-HSA-170998,000400,RAL +RE,R-HSA-171016,000326,p38 +RE,R-HSA-171172,000443,SMAD2_3 +RE,R-HSA-171182,000443,SMAD2_3 +RE,R-HSA-173584,000072,C1 +RE,R-HSA-173615,000072,C1 +RE,R-HSA-173617,000072,C1 +RE,R-HSA-173728,000278,MAC +RE,R-HSA-174074,000131,Cyclin_A +RE,R-HSA-174454,000411,RFC +RE,R-HSA-177105,000443,SMAD2_3 +RE,R-HSA-177656,000312,NFkappaB_1 +RE,R-HSA-177662,000312,NFkappaB_1 +RE,R-HSA-177663,000250,IKK_complex +RE,R-HSA-179508,000025,ALDO +RE,R-HSA-182582,000132,Cyclin_D +RE,R-HSA-182700,000132,Cyclin_D +RE,R-HSA-184196,000349,PDGF_BB +RE,R-HSA-184198,000349,PDGF_BB +RE,R-HSA-184203,000347,PDGF_AA +RE,R-HSA-184204,000349,PDGF_BB +RE,R-HSA-184206,000349,PDGF_BB +RE,R-HSA-186769,000343,PDGFR +RE,R-HSA-186769,000345,PDGFR_AB +RE,R-HSA-186770,000343,PDGFR +RE,R-HSA-186770,000345,PDGFR_AB +RE,R-HSA-186791,000343,PDGFR +RE,R-HSA-186791,000345,PDGFR_AB +RE,R-HSA-186792,000343,PDGFR +RE,R-HSA-186792,000345,PDGFR_AB +RE,R-HSA-186799,000346,PDGFR_BB +RE,R-HSA-186805,000346,PDGFR_BB +RE,R-HSA-186816,000344,PDGFR_AA +RE,R-HSA-186817,000344,PDGFR_AA +RE,R-HSA-186821,000343,PDGFR +RE,R-HSA-186821,000345,PDGFR_AB +RE,R-HSA-187493,000133,Cyclin_E +RE,R-HSA-189382,000240,HMOX +RE,R-HSA-189828,000326,p38 +RE,R-HSA-1911410,000055,ARRB +RE,R-HSA-1911440,000317,Notch +RE,R-HSA-1911472,000317,Notch +RE,R-HSA-1911474,000317,Notch +RE,R-HSA-1911547,000317,Notch +RE,R-HSA-1911550,000317,Notch +RE,R-HSA-195361,000495,VEGF +RE,R-HSA-195376,000495,VEGF +RE,R-HSA-196206,000379,PPP2 +RE,R-HSA-198358,000194,GSK3 +RE,R-HSA-198373,000194,GSK3 +RE,R-HSA-198701,000161,ERK +RE,R-HSA-198899,000090,CD8 +RE,R-HSA-200408,000042,AMPK_A2B2G2 +RE,R-HSA-200563,000005,ACC +RE,R-HSA-201465,000070,BMP_receptor_type_II +RE,R-HSA-201689,000145,DVL +RE,R-HSA-201711,000104,CK2 +RE,R-HSA-201725,000145,DVL +RE,R-HSA-201779,000384,PPP3C +RE,R-HSA-201798,000384,PPP3C +RE,R-HSA-201804,000070,BMP_receptor_type_II +RE,R-HSA-202052,000023,AKT +RE,R-HSA-202072,000023,AKT +RE,R-HSA-202074,000023,AKT +RE,R-HSA-202088,000023,AKT +RE,R-HSA-202513,000250,IKK_complex +RE,R-HSA-202562,000250,IKK_complex +RE,R-HSA-202877,000082,Caspase_3_7 +RE,R-HSA-2029095,000372,PLCG +RE,R-HSA-2029115,000494,VAV +RE,R-HSA-203947,000353,PDK +RE,R-HSA-206893,000011,Activin_A +RE,R-HSA-2089970,000109,COL1 +RE,R-HSA-212420,000317,Notch +RE,R-HSA-2127310,000111,COL5 +RE,R-HSA-2127389,000110,COL4 +RE,R-HSA-2127422,000111,COL5 +RE,R-HSA-2151208,000045,AMPK_beta +RE,R-HSA-2151212,000046,AMPK_gamma +RE,R-HSA-2151213,000044,AMPK_alpha +RE,R-HSA-215989,000273,Laminin_111 +RE,R-HSA-216001,000274,Laminin_332 +RE,R-HSA-2176482,000443,SMAD2_3 +RE,R-HSA-2187329,000443,SMAD2_3 +RE,R-HSA-2187387,000443,SMAD2_3 +RE,R-HSA-2213185,000142,DNM +RE,R-HSA-2220790,000274,Laminin_332 +RE,R-HSA-2316451,000046,AMPK_gamma +RE,R-HSA-2317310,000023,AKT +RE,R-HSA-2317317,000023,AKT +RE,R-HSA-2317329,000023,AKT +RE,R-HSA-2395330,000465,TGFB +RE,R-HSA-2396039,000109,COL1 +RE,R-HSA-2396161,000109,COL1 +RE,R-HSA-2396179,000109,COL1 +RE,R-HSA-2396183,000109,COL1 +RE,R-HSA-2396256,000109,COL1 +RE,R-HSA-2396260,000109,COL1 +RE,R-HSA-2396334,000109,COL1 +RE,R-HSA-2396451,000109,COL1 +RE,R-HSA-2396456,000109,COL1 +RE,R-HSA-2396478,000109,COL1 +RE,R-HSA-2399520,000109,COL1 +RE,R-HSA-2399659,000274,Laminin_332 +RE,R-HSA-2400006,000023,AKT +RE,R-HSA-2400013,000023,AKT +RE,R-HSA-2422450,000161,ERK +RE,R-HSA-2426131,000314,NFY +RE,R-HSA-2426276,000349,PDGF_BB +RE,R-HSA-2426371,000273,Laminin_111 +RE,R-HSA-2428941,000109,COL1 +RE,R-HSA-2445131,000264,IRS +RE,R-HSA-2445139,000264,IRS +RE,R-HSA-2457842,000323,p14_3_3 +RE,R-HSA-2470478,000010,Activin +RE,R-HSA-2470478,000012,Activin_AB +RE,R-HSA-2470491,000010,Activin +RE,R-HSA-2470491,000012,Activin_AB +RE,R-HSA-2470494,000010,Activin +RE,R-HSA-2470494,000012,Activin_AB +RE,R-HSA-2530496,000172,FNT +RE,R-HSA-2533911,000274,Laminin_332 +RE,R-HSA-264974,000164,EXOC +RE,R-HSA-2672035,000473,TN +RE,R-HSA-2681744,000473,TN +RE,R-HSA-2685653,000372,PLCG +RE,R-HSA-2685656,000409,RASGRP +RE,R-HSA-2990868,000101,Cholinesterase +RE,R-HSA-2993807,000392,Propionyl_CoA_carboxylase +RE,R-HSA-2993809,000392,Propionyl_CoA_carboxylase +RE,R-HSA-3132719,000163,ETS +RE,R-HSA-3132724,000163,ETS +RE,R-HSA-3200029,000163,ETS +RE,R-HSA-3238268,000497,Wnt +RE,R-HSA-3238374,000497,Wnt +RE,R-HSA-3247790,000497,Wnt +RE,R-HSA-3247824,000497,Wnt +RE,R-HSA-3247835,000497,Wnt +RE,R-HSA-3299546,000460,TCF_LEF +RE,R-HSA-3323122,000392,Propionyl_CoA_carboxylase +RE,R-HSA-3323155,000392,Propionyl_CoA_carboxylase +RE,R-HSA-3371429,000242,HSP90A +RE,R-HSA-349716,000306,NCOR +RE,R-HSA-3640819,000062,AXIN +RE,R-HSA-3640837,000101,Cholinesterase +RE,R-HSA-3640863,000062,AXIN +RE,R-HSA-3656389,000161,ERK +RE,R-HSA-374848,000215,G_q +RE,R-HSA-374848,000216,G_q_alpha +RE,R-HSA-376002,000003,ABL_family +RE,R-HSA-3772407,000145,DVL +RE,R-HSA-3772502,000062,AXIN +RE,R-HSA-378941,000219,hCG +RE,R-HSA-378947,000175,FSH +RE,R-HSA-378969,000276,LH +RE,R-HSA-380748,000349,PDGF_BB +RE,R-HSA-380751,000349,PDGF_BB +RE,R-HSA-380759,000348,PDGF_AB +RE,R-HSA-380759,000349,PDGF_BB +RE,R-HSA-380931,000031,AMPK +RE,R-HSA-380934,000031,AMPK +RE,R-HSA-380961,000031,AMPK +RE,R-HSA-381204,000314,NFY +RE,R-HSA-381844,000044,AMPK_alpha +RE,R-HSA-381845,000044,AMPK_alpha +RE,R-HSA-381851,000046,AMPK_gamma +RE,R-HSA-381854,000045,AMPK_beta +RE,R-HSA-381855,000482,TSC +RE,R-HSA-381926,000342,PDGF +RE,R-HSA-381930,000351,PDGF_DD +RE,R-HSA-381935,000349,PDGF_BB +RE,R-HSA-381936,000342,PDGF +RE,R-HSA-381938,000349,PDGF_BB +RE,R-HSA-381941,000350,PDGF_CC +RE,R-HSA-3858467,000145,DVL +RE,R-HSA-3858479,000145,DVL +RE,R-HSA-387074,000349,PDGF_BB +RE,R-HSA-388544,000149,EDN +RE,R-HSA-390455,000085,CCT_complex +RE,R-HSA-390474,000085,CCT_complex +RE,R-HSA-390532,000478,Troponin_C +RE,R-HSA-390541,000479,Troponin_I +RE,R-HSA-390546,000480,Troponin_T +RE,R-HSA-390583,000477,Troponin +RE,R-HSA-390585,000477,Troponin +RE,R-HSA-390587,000478,Troponin_C +RE,R-HSA-390643,000021,ADRB +RE,R-HSA-390664,000020,ADRA2 +RE,R-HSA-390670,000021,ADRB +RE,R-HSA-390700,000020,ADRA2 +RE,R-HSA-392712,000349,PDGF_BB +RE,R-HSA-399713,000191,GRIA +RE,R-HSA-399987,000215,G_q +RE,R-HSA-399987,000216,G_q_alpha +RE,R-HSA-399992,000215,G_q +RE,R-HSA-399992,000216,G_q_alpha +RE,R-HSA-400000,000215,G_q +RE,R-HSA-400000,000216,G_q_alpha +RE,R-HSA-400008,000215,G_q +RE,R-HSA-400008,000216,G_q_alpha +RE,R-HSA-400062,000211,G_gamma +RE,R-HSA-400093,000210,G_beta +RE,R-HSA-416323,000191,GRIA +RE,R-HSA-417004,000077,CAMK2_complex +RE,R-HSA-417004,000078,CAMK2_family +RE,R-HSA-418312,000430,SERCA +RE,R-HSA-418379,000391,PRKG +RE,R-HSA-418540,000340,PDE7 +RE,R-HSA-418541,000341,PDE8 +RE,R-HSA-418570,000207,G_12 +RE,R-HSA-418570,000208,G_12_alpha +RE,R-HSA-418572,000207,G_12 +RE,R-HSA-418572,000208,G_12_alpha +RE,R-HSA-419057,000419,ROCK +RE,R-HSA-419160,000414,RHO +RE,R-HSA-419161,000414,RHO +RE,R-HSA-419164,000414,RHO +RE,R-HSA-419294,000316,NOS +RE,R-HSA-419346,000427,S1PR +RE,R-HSA-419401,000427,S1PR +RE,R-HSA-419619,000242,HSP90A +RE,R-HSA-420516,000193,GRM +RE,R-HSA-420519,000193,GRM +RE,R-HSA-420974,000191,GRIA +RE,R-HSA-421001,000191,GRIA +RE,R-HSA-426070,000140,DGK +RE,R-HSA-427905,000430,SERCA +RE,R-HSA-428110,000374,PPAP2 +RE,R-HSA-428475,000330,PAK +RE,R-HSA-429349,000259,INS +RE,R-HSA-429352,000259,INS +RE,R-HSA-429384,000259,INS +RE,R-HSA-429407,000259,INS +RE,R-HSA-429472,000259,INS +RE,R-HSA-429842,000153,EIF4A +RE,R-HSA-430172,000494,VAV +RE,R-HSA-432792,000077,CAMK2_complex +RE,R-HSA-432792,000078,CAMK2_family +RE,R-HSA-434632,000494,VAV +RE,R-HSA-442272,000494,VAV +RE,R-HSA-442295,000494,VAV +RE,R-HSA-442734,000408,RASGRF +RE,R-HSA-444796,000077,CAMK2_complex +RE,R-HSA-444796,000078,CAMK2_family +RE,R-HSA-445134,000333,Patched +RE,R-HSA-445374,000077,CAMK2_complex +RE,R-HSA-445374,000078,CAMK2_family +RE,R-HSA-445744,000252,IL1 +RE,R-HSA-446847,000142,DNM +RE,R-HSA-446849,000329,P90RSK +RE,R-HSA-447102,000253,IL12 +RE,R-HSA-448866,000285,MEF2 +RE,R-HSA-448868,000285,MEF2 +RE,R-HSA-450226,000267,JNK +RE,R-HSA-450253,000267,JNK +RE,R-HSA-450289,000267,JNK +RE,R-HSA-451402,000014,ACTN +RE,R-HSA-452094,000454,STAT5 +RE,R-HSA-4551456,000391,PRKG +RE,R-HSA-4551462,000391,PRKG +RE,R-HSA-4641132,000062,AXIN +RE,R-HSA-4652685,000145,DVL +RE,R-HSA-4687776,000419,ROCK +RE,R-HSA-507919,000454,STAT5 +RE,R-HSA-507929,000454,STAT5 +RE,R-HSA-508012,000454,STAT5 +RE,R-HSA-5082395,000242,HSP90A +RE,R-HSA-5082406,000243,HSP90AA +RE,R-HSA-5083623,000125,CSNK2 +RE,R-HSA-5083624,000125,CSNK2 +RE,R-HSA-5138439,000105,Clathrin +RE,R-HSA-5138447,000105,Clathrin +RE,R-HSA-517388,000177,FZD +RE,R-HSA-5218789,000494,VAV +RE,R-HSA-5262981,000250,IKK_complex +RE,R-HSA-5323539,000460,TCF_LEF +RE,R-HSA-5333713,000105,Clathrin +RE,R-HSA-5336141,000047,Annexin_II_heterotetramer +RE,R-HSA-5340329,000494,VAV +RE,R-HSA-5358286,000226,Hedgehog +RE,R-HSA-5358318,000226,Hedgehog +RE,R-HSA-5358332,000226,Hedgehog +RE,R-HSA-5362382,000226,Hedgehog +RE,R-HSA-5362391,000226,Hedgehog +RE,R-HSA-5610566,000390,PRKAR +RE,R-HSA-5610568,000390,PRKAR +RE,R-HSA-5610577,000017,ADCY +RE,R-HSA-5610578,000017,ADCY +RE,R-HSA-5618088,000242,HSP90A +RE,R-HSA-5623453,000164,EXOC +RE,R-HSA-5656056,000171,FLRT +RE,R-HSA-5658216,000407,RasGAP +RE,R-HSA-5658219,000449,SPRED +RE,R-HSA-5672337,000482,TSC +RE,R-HSA-5672686,000286,MEK +RE,R-HSA-5672705,000286,MEK +RE,R-HSA-5672708,000399,RAF +RE,R-HSA-5672716,000286,MEK +RE,R-HSA-5672721,000286,MEK +RE,R-HSA-5672726,000399,RAF +RE,R-HSA-5674134,000399,RAF +RE,R-HSA-5674136,000399,RAF +RE,R-HSA-5674338,000161,ERK +RE,R-HSA-5674340,000161,ERK +RE,R-HSA-5674341,000161,ERK +RE,R-HSA-5674489,000286,MEK +RE,R-HSA-5675361,000161,ERK +RE,R-HSA-5675363,000161,ERK +RE,R-HSA-5682664,000056,ATG4 +RE,R-HSA-5693120,000064,BCKDC +RE,R-HSA-5696998,000131,Cyclin_A +RE,R-HSA-6783051,000131,Cyclin_A +RE,R-HSA-6792583,000064,BCKDC +RE,R-HSA-6793931,000276,LH +RE,R-HSA-6793934,000276,LH +RE,R-HSA-6798076,000327,p53_family +RE,R-HSA-6798078,000327,p53_family +RE,R-HSA-6802607,000404,RAS +RE,R-HSA-6802608,000404,RAS +RE,R-HSA-6805064,000125,CSNK2 +RE,R-HSA-6805066,000104,CK2 +RE,R-HSA-6805073,000125,CSNK2 +RE,R-HSA-6805467,000031,AMPK +RE,R-HSA-6813837,000133,Cyclin_E +RE,R-HSA-6814207,000210,G_beta +RE,R-HSA-6814413,000210,G_beta +RE,R-HSA-6814694,000138,Desmoglein +RE,R-HSA-68373,000133,Cyclin_E +RE,R-HSA-68436,000411,RFC +RE,R-HSA-68450,000141,DNA_polymerase_delta +RE,R-HSA-68462,000421,RPA +RE,R-HSA-69261,000091,CDC25 +RE,R-HSA-70019,000064,BCKDC +RE,R-HSA-70990,000502,ETC_complex_II +RE,R-HSA-71025,000392,Propionyl_CoA_carboxylase +RE,R-HSA-71026,000392,Propionyl_CoA_carboxylase +RE,R-HSA-72526,000152,EIF2B +RE,R-HSA-727820,000250,IKK_complex +RE,R-HSA-74674,000259,INS +RE,R-HSA-74688,000360,PI3K_p85 +RE,R-HSA-749499,000215,G_q +RE,R-HSA-749499,000216,G_q_alpha +RE,R-HSA-75202,000131,Cyclin_A +RE,R-HSA-77385,000259,INS +RE,R-HSA-8847714,000138,Desmoglein +RE,R-HSA-8848649,000079,CAPN +RE,R-HSA-8848668,000079,CAPN +RE,R-HSA-8849894,000170,FLOT +RE,R-HSA-8850524,000210,G_beta +RE,R-HSA-8852568,000278,MAC +RE,R-HSA-8855211,000061,Augmin +RE,R-HSA-8861873,000324,P2RX +RE,R-HSA-8864040,000343,PDGFR +RE,R-HSA-8864040,000345,PDGFR_AB +RE,R-HSA-8864046,000346,PDGFR_BB +RE,R-HSA-8864283,000463,TFAP2 +RE,R-HSA-8864286,000463,TFAP2 +RE,R-HSA-8865622,000454,STAT5 +RE,R-HSA-8866229,000022,ADRBK +RE,R-HSA-8868235,000142,DNM +RE,R-HSA-8868609,000142,DNM +RE,R-HSA-8870680,000169,Fibrinogen +RE,R-HSA-8936837,000232,HIF_beta +RE,R-HSA-8938866,000132,Cyclin_D +RE,R-HSA-8941923,000095,CDKN1 +RE,R-HSA-8942604,000095,CDKN1 +RE,R-HSA-8944354,000460,TCF_LEF +RE,R-HSA-8948131,000095,CDKN1 +RE,R-HSA-8950122,000253,IL12 +RE,R-HSA-8950228,000253,IL12 +RE,R-HSA-8950694,000253,IL12 +RE,R-HSA-8951427,000460,TCF_LEF +RE,R-HSA-909688,000246,IFNA +RE,R-HSA-936779,000057,ATP1A +RE,R-HSA-936820,000058,ATP1B +RE,R-HSA-976075,000148,E3_Ub_ligase +RE,R-HSA-996770,000184,GATA +SIGNOR,SIGNOR-PF1,000161,ERK +SIGNOR,SIGNOR-PF10,000145,DVL +SIGNOR,SIGNOR-PF11,000177,FZD +SIGNOR,SIGNOR-PF12,000311,NFkappaB +SIGNOR,SIGNOR-PF13,000330,PAK +SIGNOR,SIGNOR-PF14,000418,ROBO +SIGNOR,SIGNOR-PF15,000267,JNK +SIGNOR,SIGNOR-PF16,000326,p38 +SIGNOR,SIGNOR-PF17,000389,PRKAC +SIGNOR,SIGNOR-PF18,000384,PPP3C +SIGNOR,SIGNOR-PF2,000277,LPAR +SIGNOR,SIGNOR-PF20,000472,TLR +SIGNOR,SIGNOR-PF21,000458,TAOK +SIGNOR,SIGNOR-PF22,000462,TEAD +SIGNOR,SIGNOR-PF23,000168,FGFR +SIGNOR,SIGNOR-PF24,000023,AKT +SIGNOR,SIGNOR-PF25,000286,MEK +SIGNOR,SIGNOR-PF26,000329,P90RSK +SIGNOR,SIGNOR-PF27,000174,FOXO +SIGNOR,SIGNOR-PF29,000445,SMURF +SIGNOR,SIGNOR-PF3,000211,G_gamma +SIGNOR,SIGNOR-PF30,000317,Notch +SIGNOR,SIGNOR-PF31,000435,SLRP +SIGNOR,SIGNOR-PF32,000451,SRC +SIGNOR,SIGNOR-PF33,000187,GPCR +SIGNOR,SIGNOR-PF34,000362,PIM +SIGNOR,SIGNOR-PF35,000442,SMAD1_5_9 +SIGNOR,SIGNOR-PF4,000210,G_beta +SIGNOR,SIGNOR-PF5,000465,TGFB +SIGNOR,SIGNOR-PF6,000044,AMPK_alpha +SIGNOR,SIGNOR-PF7,000323,p14_3_3 +SIGNOR,SIGNOR-PF8,000167,FGF +SIGNOR,SIGNOR-PF9,000068,BMP_receptor diff --git a/famplex/resources/famplex.obo b/famplex/resources/famplex.obo new file mode 100644 index 000000000..56f1b835b --- /dev/null +++ b/famplex/resources/famplex.obo @@ -0,0 +1,8520 @@ +format-version: 1.2 +date: 21:07:2019 16:45 + +[Typedef] +id: part_of +name: part of +namespace: external +xref: BFO:0000050 +is_transitive: true + +[Typedef] +id: inverse_is_a +name: inverse is_a + +[Typedef] +id: has_part +name: has part + +[Term] +id: FPLX:000000 +name: famplex + +[Term] +id: FPLX:000001 +name: 9-1-1 +synonym: "(9-1-1) complex" EXACT [] +synonym: "9-1-1 complex" EXACT [] +synonym: "9-1-1" EXACT [] +synonym: "h9-1-1 complex" EXACT [] +xref: BEL:"9-1-1 Complex" +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:5309 ! HUS1 +relationship: has_part HGNC:9806 ! RAD1 +relationship: has_part HGNC:9827 ! RAD9A + +[Term] +id: FPLX:000002 +name: A4GALT-family +is_a: FPLX:000198 ! Glycosyltransferase +relationship: inverse_is_a HGNC:18149 ! A4GALT +relationship: inverse_is_a HGNC:17968 ! A4GNT + +[Term] +id: FPLX:000003 +name: ABL-family +synonym: "ABL family" EXACT [] +synonym: "ABL" EXACT [] +xref: IP:IPR015015 +xref: MEDSCAN:urn:agi-aopfc:0000567 +xref: RE:R-HSA-376002 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:76 ! ABL1 +relationship: inverse_is_a HGNC:77 ! ABL2 + +[Term] +id: FPLX:000004 +name: ACAD +synonym: "ACAD" EXACT [] +synonym: "acyl CoA dehydrogenase" EXACT [] +synonym: "acyl-CoA dehydrogenase" EXACT [] +xref: BEL:"ACAD Family" +xref: ECCODE:1.3.8.7 +xref: NEXTPROT-FAMILY:00093 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:87 ! ACAD8 +relationship: inverse_is_a HGNC:21497 ! ACAD9 +relationship: inverse_is_a HGNC:88 ! ACADL +relationship: inverse_is_a HGNC:89 ! ACADM +relationship: inverse_is_a HGNC:90 ! ACADS +relationship: inverse_is_a HGNC:92 ! ACADVL +relationship: inverse_is_a HGNC:21597 ! ACAD10 +relationship: inverse_is_a HGNC:30211 ! ACAD11 +relationship: inverse_is_a HGNC:91 ! ACADSB +relationship: inverse_is_a HGNC:4189 ! GCDH +relationship: inverse_is_a HGNC:6186 ! IVD + +[Term] +id: FPLX:000005 +name: ACC +synonym: "ACC" EXACT [] +synonym: "ACCs" EXACT [] +synonym: "Acetyl Coenzyme A Carboxylase" EXACT [] +synonym: "Acetyl-CoA carboxylase" EXACT [] +synonym: "acetyl-CoA carboxylase" EXACT [] +xref: BEL:"Acetyl CoA Carboxylase Complex" +xref: ECCODE:6.4.1.2 +xref: IP:IPR013537 +xref: RE:R-HSA-200563 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:84 ! ACACA +relationship: has_part HGNC:85 ! ACACB + +[Term] +id: FPLX:000006 +name: Acetyl-CoA-synthetase +synonym: "Acetate-CoA ligase" EXACT [] +synonym: "acetyl CoA ligase" EXACT [] +synonym: "acetyl CoA synthase" EXACT [] +synonym: "Acetyl-CoA synthetase" EXACT [] +synonym: "acetyl-CoA synthetase" EXACT [] +synonym: "acetyl-coenzyme A synthase" EXACT [] +synonym: "ACS" EXACT [] +xref: BEL:"Acetyl-CoA Synthetase Family" +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:10996 ! SLC27A2 +relationship: inverse_is_a HGNC:3569 ! ACSL1 +relationship: inverse_is_a HGNC:3570 ! ACSL3 +relationship: inverse_is_a HGNC:3571 ! ACSL4 +relationship: inverse_is_a HGNC:16526 ! ACSL5 +relationship: inverse_is_a HGNC:16496 ! ACSL6 + +[Term] +id: FPLX:000007 +name: ACOX +synonym: "Acyl-CoA Oxidase" EXACT [] +synonym: "acyl-CoA oxidases" EXACT [] +xref: BEL:"ACOX Family" +xref: IP:IPR002655 +xref: XFAM:PF01756 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:119 ! ACOX1 +relationship: inverse_is_a HGNC:120 ! ACOX2 +relationship: inverse_is_a HGNC:121 ! ACOX3 +relationship: inverse_is_a HGNC:25621 ! ACOXL + +[Term] +id: FPLX:000008 +name: ACSL +synonym: "Acsl" EXACT [] +synonym: "long-chain acyl-CoA synthetase" EXACT [] +xref: BEL:"ACSL Family" +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:3569 ! ACSL1 +relationship: inverse_is_a HGNC:3570 ! ACSL3 +relationship: inverse_is_a HGNC:3571 ! ACSL4 +relationship: inverse_is_a HGNC:16526 ! ACSL5 +relationship: inverse_is_a HGNC:16496 ! ACSL6 + +[Term] +id: FPLX:000009 +name: Actin +synonym: "actin filament" EXACT [] +synonym: "actin" EXACT [] +synonym: "actins" EXACT [] +xref: BEL:"ACT Family" +xref: GO:0005884 +xref: IP:IPR004000 +xref: MEDSCAN:urn:agi-protfc:actins +xref: MESH:D000199 +xref: NCIT:C16258 +xref: NEXTPROT-FAMILY:00078 +xref: XFAM:PF00022 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:129 ! ACTA1 +relationship: inverse_is_a HGNC:130 ! ACTA2 +relationship: inverse_is_a HGNC:132 ! ACTB +relationship: inverse_is_a HGNC:143 ! ACTC1 +relationship: inverse_is_a HGNC:144 ! ACTG1 +relationship: inverse_is_a HGNC:145 ! ACTG2 +relationship: inverse_is_a FPLX:000178 ! F_actin + +[Term] +id: FPLX:000010 +name: Activin +synonym: "activin protein" EXACT [] +synonym: "Activin" EXACT [] +synonym: "activin" EXACT [] +synonym: "activins" EXACT [] +xref: GO:0048180 +xref: NCIT:C20456 +xref: RE:R-HSA-2470478 +xref: RE:R-HSA-2470491 +xref: RE:R-HSA-2470494 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a FPLX:000011 ! Activin_A +relationship: inverse_is_a FPLX:000012 ! Activin_AB +relationship: inverse_is_a FPLX:000013 ! Activin_B + +[Term] +id: FPLX:000011 +name: Activin-A +synonym: "Activin A protein" EXACT [] +synonym: "Activin A" EXACT [] +synonym: "activin A" EXACT [] +synonym: "activin-A" EXACT [] +synonym: "activinA" EXACT [] +xref: GO:0043509 +xref: IP:IPR000491 +xref: RE:R-HSA-206893 +is_a: FPLX:000010 ! Activin +relationship: has_part HGNC:6066 ! INHBA + +[Term] +id: FPLX:000012 +name: Activin-AB +synonym: "activin AB" EXACT [] +xref: RE:R-HSA-1449698 +xref: RE:R-HSA-2470478 +xref: RE:R-HSA-2470491 +xref: RE:R-HSA-2470494 +is_a: FPLX:000010 ! Activin +relationship: has_part HGNC:6066 ! INHBA +relationship: has_part HGNC:6067 ! INHBB + +[Term] +id: FPLX:000013 +name: Activin-B +synonym: "activin-B" EXACT [] +xref: IP:IPR000381 +xref: RE:R-HSA-1449672 +is_a: FPLX:000010 ! Activin +relationship: has_part HGNC:6067 ! INHBB + +[Term] +id: FPLX:000014 +name: ACTN +synonym: "actinin" EXACT [] +xref: BEL:"ACTN Family" +xref: RE:R-HSA-451402 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:163 ! ACTN1 +relationship: inverse_is_a HGNC:164 ! ACTN2 +relationship: inverse_is_a HGNC:165 ! ACTN3 +relationship: inverse_is_a HGNC:166 ! ACTN4 + +[Term] +id: FPLX:000015 +name: Adaptor-protein-II +synonym: "Adaptor Protein 2 complex" EXACT [] +synonym: "adaptor protein complex 2" EXACT [] +synonym: "AP-2 adaptor complex" EXACT [] +synonym: "AP-2 complex" EXACT [] +synonym: "AP-2" EXACT [] +synonym: "AP2 adaptor complex" EXACT [] +synonym: "AP2 clathrin adaptor complex" EXACT [] +synonym: "AP2 complex" EXACT [] +synonym: "AP2" EXACT [] +xref: BEL:"Adaptor Protein II Complex" +xref: GO:0030122 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:563 ! AP2B1 +relationship: has_part HGNC:564 ! AP2M1 +relationship: has_part HGNC:565 ! AP2S1 +relationship: has_part FPLX:000049 ! AP2A + +[Term] +id: FPLX:000016 +name: Adaptor-protein-III +synonym: "adaptor protein complex 3" EXACT [] +synonym: "AP-3" EXACT [] +synonym: "AP3" EXACT [] +xref: BEL:"Adaptor Protein III Complex" +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:566 ! AP3B1 +relationship: has_part HGNC:568 ! AP3D1 +relationship: has_part HGNC:2013 ! AP3S1 +relationship: has_part HGNC:571 ! AP3S2 + +[Term] +id: FPLX:000017 +name: ADCY +synonym: "adenylate cyclase" EXACT [] +synonym: "adenylyl cyclase" EXACT [] +xref: BEL:"ADCY Family" +xref: NCIT:C16264 +xref: RE:R-HSA-5610577 +xref: RE:R-HSA-5610578 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:232 ! ADCY1 +relationship: inverse_is_a HGNC:233 ! ADCY2 +relationship: inverse_is_a HGNC:234 ! ADCY3 +relationship: inverse_is_a HGNC:235 ! ADCY4 +relationship: inverse_is_a HGNC:236 ! ADCY5 +relationship: inverse_is_a HGNC:237 ! ADCY6 +relationship: inverse_is_a HGNC:238 ! ADCY7 +relationship: inverse_is_a HGNC:239 ! ADCY8 +relationship: inverse_is_a HGNC:240 ! ADCY9 +relationship: inverse_is_a HGNC:21285 ! ADCY10 + +[Term] +id: FPLX:000018 +name: ADH +synonym: "alcohol dehydrogenase" EXACT [] +xref: BEL:"ADH Family" +xref: ECCODE:1.1.1.1 +xref: NCIT:C16272 +xref: XFAM:PF00465 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:249 ! ADH1A +relationship: inverse_is_a HGNC:250 ! ADH1B +relationship: inverse_is_a HGNC:251 ! ADH1C +relationship: inverse_is_a HGNC:252 ! ADH4 +relationship: inverse_is_a HGNC:253 ! ADH5 +relationship: inverse_is_a HGNC:255 ! ADH6 +relationship: inverse_is_a HGNC:256 ! ADH7 +relationship: inverse_is_a HGNC:16354 ! ADHFE1 + +[Term] +id: FPLX:000019 +name: ADRA +synonym: "a-adrenoreceptor" EXACT [] +synonym: "alpha adrenoceptor" EXACT [] +synonym: "alpha-adrenergic receptor" EXACT [] +synonym: "alpha-adrenoreceptor" EXACT [] +synonym: "alpha-adrenoreceptors" EXACT [] +synonym: "alpha1 adrenoceptor" EXACT [] +synonym: "α-adrenergic receptor" EXACT [] +synonym: "α-adrenoreceptor" EXACT [] +synonym: "α-adrenoreceptors" EXACT [] +xref: BEL:"ADRA Family" +xref: GO:0004936 +xref: GO:0004937 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:277 ! ADRA1A +relationship: inverse_is_a HGNC:278 ! ADRA1B +relationship: inverse_is_a HGNC:280 ! ADRA1D +relationship: inverse_is_a HGNC:281 ! ADRA2A +relationship: inverse_is_a HGNC:282 ! ADRA2B +relationship: inverse_is_a HGNC:283 ! ADRA2C + +[Term] +id: FPLX:000020 +name: ADRA2 +synonym: "alpha(2)-adrenoceptors" EXACT [] +synonym: "alpha(2)-ARs" EXACT [] +synonym: "alpha2 adrenoceptor" EXACT [] +synonym: "alpha2-AR" EXACT [] +synonym: "ofalpha(2)-adrenoceptor" EXACT [] +synonym: "ofα(2)-adrenoceptor" EXACT [] +synonym: "α(2)-adrenoceptors" EXACT [] +synonym: "α(2)-ARs" EXACT [] +synonym: "α2-AR" EXACT [] +xref: BEL:"ADRA2 Family" +xref: GO:0004938 +xref: RE:R-HSA-390664 +xref: RE:R-HSA-390700 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:281 ! ADRA2A +relationship: inverse_is_a HGNC:282 ! ADRA2B +relationship: inverse_is_a HGNC:283 ! ADRA2C + +[Term] +id: FPLX:000021 +name: ADRB +synonym: "b-adrenergic receptor" EXACT [] +synonym: "b-receptors" EXACT [] +synonym: "beta-adrenergic receptor" EXACT [] +synonym: "beta-adrenoreceptor" EXACT [] +synonym: "betaAR" EXACT [] +synonym: "β-adrenergic receptor" EXACT [] +synonym: "β-adrenoreceptor" EXACT [] +synonym: "βAR" EXACT [] +xref: BEL:"ADRB Family" +xref: NCIT:C17062 +xref: RE:R-HSA-390643 +xref: RE:R-HSA-390670 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:285 ! ADRB1 +relationship: inverse_is_a HGNC:286 ! ADRB2 +relationship: inverse_is_a HGNC:288 ! ADRB3 + +[Term] +id: FPLX:000022 +name: ADRBK +synonym: "BARK" EXACT [] +synonym: "beta adrenergic receptor kinase" EXACT [] +synonym: "betaARK" EXACT [] +synonym: "β adrenergic receptor kinase" EXACT [] +synonym: "βARK" EXACT [] +xref: BEL:"ADRBK Family" +xref: RE:R-HSA-8866229 +is_a: FPLX:000192 ! GRK +relationship: inverse_is_a HGNC:289 ! GRK2 +relationship: inverse_is_a HGNC:290 ! GRK3 + +[Term] +id: FPLX:000023 +name: AKT +synonym: "AKT family" EXACT [] +synonym: "AKT" EXACT [] +synonym: "Akt" EXACT [] +synonym: "PKB" EXACT [] +synonym: "PKB-Akt" EXACT [] +synonym: "PKB/Akt" EXACT [] +xref: BEL:"AKT Family" +xref: MEDSCAN:urn:agi-aopfc:0000439 +xref: NCIT:C41625 +xref: RE:R-HSA-202052 +xref: RE:R-HSA-202072 +xref: RE:R-HSA-202074 +xref: RE:R-HSA-202088 +xref: RE:R-HSA-2317310 +xref: RE:R-HSA-2317317 +xref: RE:R-HSA-2317329 +xref: RE:R-HSA-2400006 +xref: RE:R-HSA-2400013 +xref: SIGNOR:SIGNOR-PF24 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:391 ! AKT1 +relationship: inverse_is_a HGNC:392 ! AKT2 +relationship: inverse_is_a HGNC:393 ! AKT3 + +[Term] +id: FPLX:000024 +name: ALDH +synonym: "aldehyde dehydrogenase (NAD+)" EXACT [] +synonym: "Aldehyde dehydrogenase" EXACT [] +synonym: "aldehyde dehydrogenase" EXACT [] +synonym: "ALDH" EXACT [] +xref: BEL:"ALDH Family" +xref: ECCODE:1.2.1.3 +xref: NCIT:C118481 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:402 ! ALDH1A1 +relationship: inverse_is_a HGNC:15472 ! ALDH1A2 +relationship: inverse_is_a HGNC:409 ! ALDH1A3 +relationship: inverse_is_a HGNC:404 ! ALDH2 +relationship: inverse_is_a HGNC:405 ! ALDH3A1 +relationship: inverse_is_a HGNC:403 ! ALDH3A2 +relationship: inverse_is_a HGNC:410 ! ALDH3B1 +relationship: inverse_is_a HGNC:408 ! ALDH5A1 +relationship: inverse_is_a HGNC:877 ! ALDH7A1 +relationship: inverse_is_a HGNC:412 ! ALDH9A1 + +[Term] +id: FPLX:000025 +name: ALDO +synonym: "ALDO" EXACT [] +synonym: "fructose-bisphosphate aldolase" EXACT [] +xref: BEL:"ALDO Family" +xref: ECCODE:4.1.2.13 +xref: IP:IPR000741 +xref: IP:IPR029768 +xref: RE:R-HSA-179508 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:414 ! ALDOA +relationship: inverse_is_a HGNC:417 ! ALDOB +relationship: inverse_is_a HGNC:418 ! ALDOC + +[Term] +id: FPLX:000026 +name: ALG10 +synonym: "ALG10" EXACT [] +synonym: "Alpha-1,2-glucosyltransferase" EXACT [] +synonym: "Alpha-1,2-glucosyltransferases" EXACT [] +synonym: "alpha-1,2-glucosyltransferase" EXACT [] +synonym: "alpha-1,2-glucosyltransferases" EXACT [] +is_a: FPLX:000198 ! Glycosyltransferase +relationship: inverse_is_a HGNC:23162 ! ALG10 +relationship: inverse_is_a HGNC:31088 ! ALG10B + +[Term] +id: FPLX:000027 +name: ALG1-family +is_a: FPLX:000198 ! Glycosyltransferase +relationship: inverse_is_a HGNC:18294 ! ALG1 +relationship: inverse_is_a HGNC:33721 ! ALG1L +relationship: inverse_is_a HGNC:37258 ! ALG1L2 +relationship: inverse_is_a HGNC:23159 ! ALG2 +relationship: inverse_is_a HGNC:32456 ! ALG11 +relationship: inverse_is_a HGNC:26483 ! GLT1D1 +relationship: inverse_is_a HGNC:20887 ! GTDC1 +relationship: inverse_is_a HGNC:4706 ! GYS1 +relationship: inverse_is_a HGNC:4707 ! GYS2 +relationship: inverse_is_a HGNC:8957 ! PIGA + +[Term] +id: FPLX:000028 +name: ALG3-family +is_a: FPLX:000198 ! Glycosyltransferase +relationship: inverse_is_a HGNC:23056 ! ALG3 +relationship: inverse_is_a HGNC:15672 ! ALG9 +relationship: inverse_is_a HGNC:19358 ! ALG12 +relationship: inverse_is_a HGNC:8959 ! PIGB +relationship: inverse_is_a HGNC:18858 ! PIGM +relationship: inverse_is_a HGNC:26031 ! PIGV +relationship: inverse_is_a HGNC:30596 ! PIGZ +relationship: inverse_is_a HGNC:9202 ! POMT1 +relationship: inverse_is_a HGNC:19743 ! POMT2 + +[Term] +id: FPLX:000029 +name: ALG6-family +synonym: "Alpha-1,3-glucosyltransferase" EXACT [] +synonym: "Alpha-1,3-glucosyltransferases" EXACT [] +synonym: "alpha-1,3-glucosyltransferase" EXACT [] +synonym: "alpha-1,3-glucosyltransferases" EXACT [] +synonym: "Alpha-1,4-glucosyltransferase" EXACT [] +synonym: "Alpha-1,4-glucosyltransferases" EXACT [] +synonym: "alpha-1,4-glucosyltransferase" EXACT [] +synonym: "alpha-1,4-glucosyltransferases" EXACT [] +is_a: FPLX:000198 ! Glycosyltransferase +relationship: inverse_is_a HGNC:23157 ! ALG6 +relationship: inverse_is_a HGNC:23161 ! ALG8 + +[Term] +id: FPLX:000030 +name: ALG13-family +is_a: FPLX:000198 ! Glycosyltransferase +relationship: inverse_is_a HGNC:30881 ! ALG13 +relationship: inverse_is_a HGNC:28287 ! ALG14 + +[Term] +id: FPLX:000031 +name: AMPK +synonym: "AMPK" EXACT [] +xref: BEL:"AMP Activated Protein Kinase Complex" +xref: ECCODE:2.7.11.31 +xref: MEDSCAN:urn:agi-protfc:AMPK +xref: NCIT:C94701 +xref: NEXTPROT-FAMILY:03071 +xref: RE:R-HSA-380931 +xref: RE:R-HSA-380934 +xref: RE:R-HSA-380961 +xref: RE:R-HSA-6805467 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a FPLX:000032 ! AMPK_A1B1G1 +relationship: inverse_is_a FPLX:000033 ! AMPK_A1B1G2 +relationship: inverse_is_a FPLX:000034 ! AMPK_A1B1G3 +relationship: inverse_is_a FPLX:000035 ! AMPK_A1B2G1 +relationship: inverse_is_a FPLX:000036 ! AMPK_A1B2G2 +relationship: inverse_is_a FPLX:000037 ! AMPK_A1B2G3 +relationship: inverse_is_a FPLX:000038 ! AMPK_A2B1G1 +relationship: inverse_is_a FPLX:000039 ! AMPK_A2B1G2 +relationship: inverse_is_a FPLX:000040 ! AMPK_A2B1G3 +relationship: inverse_is_a FPLX:000041 ! AMPK_A2B2G1 +relationship: inverse_is_a FPLX:000042 ! AMPK_A2B2G2 +relationship: inverse_is_a FPLX:000043 ! AMPK_A2B2G3 +relationship: has_part FPLX:000044 ! AMPK_alpha +relationship: has_part FPLX:000045 ! AMPK_beta +relationship: has_part FPLX:000046 ! AMPK_gamma + +[Term] +id: FPLX:000032 +name: AMPK-A1B1G1 +synonym: "AMPK (alpha 1, beta 1, gamma 1)" EXACT [] +synonym: "AMPK (α 1, β 1, γ 1)" EXACT [] +synonym: "alpha1beta1gamma1" EXACT [] +synonym: "AMPK (A1/B1/G1)" EXACT [] +synonym: "AMPK a1b1g1" EXACT [] +synonym: "AMPK alpha1beta1gamma1" EXACT [] +synonym: "AMPK α1β1γ1" EXACT [] +synonym: "α1β1γ1" EXACT [] +is_a: FPLX:000031 ! AMPK +relationship: has_part HGNC:9376 ! PRKAA1 +relationship: has_part HGNC:9378 ! PRKAB1 +relationship: has_part HGNC:9385 ! PRKAG1 + +[Term] +id: FPLX:000033 +name: AMPK-A1B1G2 +synonym: "AMPK (alpha 1, beta 1, gamma 2)" EXACT [] +synonym: "AMPK (α 1, β 1, γ 2)" EXACT [] +synonym: "alpha1beta1gamma2" EXACT [] +synonym: "AMPK (A1/B1/G2)" EXACT [] +synonym: "AMPK a1b1g2" EXACT [] +synonym: "AMPK alpha1beta1gamma2" EXACT [] +synonym: "AMPK α1β1γ2" EXACT [] +synonym: "α1β1γ2" EXACT [] +is_a: FPLX:000031 ! AMPK +relationship: has_part HGNC:9376 ! PRKAA1 +relationship: has_part HGNC:9378 ! PRKAB1 +relationship: has_part HGNC:9386 ! PRKAG2 + +[Term] +id: FPLX:000034 +name: AMPK-A1B1G3 +synonym: "AMPK (alpha 1, beta 1, gamma 3)" EXACT [] +synonym: "AMPK (α 1, β 1, γ 3)" EXACT [] +synonym: "alpha1beta1gamma3" EXACT [] +synonym: "AMPK (A1/B1/G3)" EXACT [] +synonym: "AMPK a1b1g3" EXACT [] +synonym: "AMPK alpha1beta1gamma3" EXACT [] +synonym: "AMPK α1β1γ3" EXACT [] +synonym: "α1β1γ3" EXACT [] +is_a: FPLX:000031 ! AMPK +relationship: has_part HGNC:9376 ! PRKAA1 +relationship: has_part HGNC:9378 ! PRKAB1 +relationship: has_part HGNC:9387 ! PRKAG3 + +[Term] +id: FPLX:000035 +name: AMPK-A1B2G1 +synonym: "AMPK (alpha 1, beta 2, gamma 1)" EXACT [] +synonym: "AMPK (α 1, β 2, γ 1)" EXACT [] +synonym: "alpha1beta2gamma1" EXACT [] +synonym: "AMPK (A1/B2/G1)" EXACT [] +synonym: "AMPK a1b2g1" EXACT [] +synonym: "AMPK alpha1beta2gamma1" EXACT [] +synonym: "AMPK α1β2γ1" EXACT [] +synonym: "α1β2γ1" EXACT [] +is_a: FPLX:000031 ! AMPK +relationship: has_part HGNC:9376 ! PRKAA1 +relationship: has_part HGNC:9379 ! PRKAB2 +relationship: has_part HGNC:9385 ! PRKAG1 + +[Term] +id: FPLX:000036 +name: AMPK-A1B2G2 +synonym: "AMPK (alpha 1, beta 2, gamma 2)" EXACT [] +synonym: "AMPK (α 1, β 2, γ 2)" EXACT [] +synonym: "alpha1beta2gamma2" EXACT [] +synonym: "AMPK (A1/B2/G2)" EXACT [] +synonym: "AMPK a1b2g2" EXACT [] +synonym: "AMPK alpha1beta2gamma2" EXACT [] +synonym: "AMPK α1β2γ2" EXACT [] +synonym: "α1β2γ2" EXACT [] +is_a: FPLX:000031 ! AMPK +relationship: has_part HGNC:9376 ! PRKAA1 +relationship: has_part HGNC:9379 ! PRKAB2 +relationship: has_part HGNC:9386 ! PRKAG2 + +[Term] +id: FPLX:000037 +name: AMPK-A1B2G3 +synonym: "AMPK (alpha 1, beta 2, gamma 3)" EXACT [] +synonym: "AMPK (α 1, β 2, γ 3)" EXACT [] +synonym: "AMPK (A1/B2/G3)" EXACT [] +synonym: "AMPK alpha1beta2gamma3" EXACT [] +synonym: "AMPK α1β2γ3" EXACT [] +is_a: FPLX:000031 ! AMPK +relationship: has_part HGNC:9376 ! PRKAA1 +relationship: has_part HGNC:9379 ! PRKAB2 +relationship: has_part HGNC:9387 ! PRKAG3 + +[Term] +id: FPLX:000038 +name: AMPK-A2B1G1 +synonym: "AMPK (alpha 2, beta 1, gamma 1)" EXACT [] +synonym: "AMPK (α 2, β 1, γ 1)" EXACT [] +synonym: "alpha2beta1gamma1" EXACT [] +synonym: "AMPK (A2/B1/G1)" EXACT [] +synonym: "AMPK a2b1g1" EXACT [] +synonym: "AMPK alpha2beta1gamma1" EXACT [] +synonym: "AMPK α2β1γ1" EXACT [] +synonym: "α2β1γ1" EXACT [] +is_a: FPLX:000031 ! AMPK +relationship: has_part HGNC:9377 ! PRKAA2 +relationship: has_part HGNC:9378 ! PRKAB1 +relationship: has_part HGNC:9385 ! PRKAG1 + +[Term] +id: FPLX:000039 +name: AMPK-A2B1G2 +synonym: "AMPK (alpha 2, beta 1, gamma 2)" EXACT [] +synonym: "AMPK (α 2, β 1, γ 2)" EXACT [] +synonym: "AMPK (A2/B1/G2)" EXACT [] +synonym: "AMPK alpha2beta1gamma2" EXACT [] +synonym: "AMPK α2β1γ2" EXACT [] +is_a: FPLX:000031 ! AMPK +relationship: has_part HGNC:9377 ! PRKAA2 +relationship: has_part HGNC:9378 ! PRKAB1 +relationship: has_part HGNC:9386 ! PRKAG2 + +[Term] +id: FPLX:000040 +name: AMPK-A2B1G3 +synonym: "AMPK (alpha 2, beta 1, gamma 3)" EXACT [] +synonym: "AMPK (α 2, β 1, γ 3)" EXACT [] +synonym: "AMPK (A2/B1/G3)" EXACT [] +synonym: "AMPK alpha2beta1gamma3" EXACT [] +synonym: "AMPK α2β1γ3" EXACT [] +is_a: FPLX:000031 ! AMPK +relationship: has_part HGNC:9377 ! PRKAA2 +relationship: has_part HGNC:9378 ! PRKAB1 +relationship: has_part HGNC:9387 ! PRKAG3 + +[Term] +id: FPLX:000041 +name: AMPK-A2B2G1 +synonym: "AMPK (alpha 2, beta 2, gamma 1)" EXACT [] +synonym: "AMPK (α 2, β 2, γ 1)" EXACT [] +synonym: "alpha2beta2gamma1" EXACT [] +synonym: "AMPK (A2/B2/G1)" EXACT [] +synonym: "AMPK a2b2g1" EXACT [] +synonym: "AMPK alpha2beta2gamma1" EXACT [] +synonym: "AMPK α2β2γ1" EXACT [] +synonym: "α2β2γ1" EXACT [] +is_a: FPLX:000031 ! AMPK +relationship: has_part HGNC:9377 ! PRKAA2 +relationship: has_part HGNC:9379 ! PRKAB2 +relationship: has_part HGNC:9385 ! PRKAG1 + +[Term] +id: FPLX:000042 +name: AMPK-A2B2G2 +synonym: "AMPK (alpha 2, beta 2, gamma 2)" EXACT [] +synonym: "AMPK (α 2, β 2, γ 2)" EXACT [] +synonym: "alpha2beta2gamma2" EXACT [] +synonym: "AMPK (A2/B2/G2)" EXACT [] +synonym: "AMPK a2b2g2" EXACT [] +synonym: "AMPK alpha2beta2gamma2" EXACT [] +synonym: "AMPK α2β2γ2" EXACT [] +synonym: "α2β2γ2" EXACT [] +xref: RE:R-HSA-163679 +xref: RE:R-HSA-163736 +xref: RE:R-HSA-163747 +xref: RE:R-HSA-200408 +is_a: FPLX:000031 ! AMPK +relationship: has_part HGNC:9377 ! PRKAA2 +relationship: has_part HGNC:9379 ! PRKAB2 +relationship: has_part HGNC:9386 ! PRKAG2 + +[Term] +id: FPLX:000043 +name: AMPK-A2B2G3 +synonym: "AMPK (alpha 2, beta 2, gamma 3)" EXACT [] +synonym: "AMPK (α 2, β 2, γ 3)" EXACT [] +synonym: "alpha2beta2gamma3" EXACT [] +synonym: "AMPK (A2/B2/G3)" EXACT [] +synonym: "AMPK a2b2g3" EXACT [] +synonym: "AMPK alpha2beta2gamma3" EXACT [] +synonym: "AMPK α2β2γ3" EXACT [] +synonym: "α2β2γ3" EXACT [] +is_a: FPLX:000031 ! AMPK +relationship: has_part HGNC:9377 ! PRKAA2 +relationship: has_part HGNC:9379 ! PRKAB2 +relationship: has_part HGNC:9387 ! PRKAG3 + +[Term] +id: FPLX:000044 +name: AMPK-alpha +synonym: "AMPKalpha" EXACT [] +synonym: "AMPKα" EXACT [] +synonym: "PRKAA" EXACT [] +xref: BEL:"PRKAA Family" +xref: IP:IPR032270 +xref: NCIT:C116019 +xref: RE:R-HSA-2151213 +xref: RE:R-HSA-381844 +xref: RE:R-HSA-381845 +xref: SIGNOR:SIGNOR-PF6 +relationship: part_of FPLX:000031 ! AMPK +relationship: inverse_is_a HGNC:9376 ! PRKAA1 +relationship: inverse_is_a HGNC:9377 ! PRKAA2 + +[Term] +id: FPLX:000045 +name: AMPK-beta +synonym: "PRKAB" EXACT [] +xref: BEL:"PRKAB Family" +xref: IP:IPR006828 +xref: IP:IPR032640 +xref: RE:R-HSA-2151208 +xref: RE:R-HSA-381854 +relationship: part_of FPLX:000031 ! AMPK +relationship: inverse_is_a HGNC:9378 ! PRKAB1 +relationship: inverse_is_a HGNC:9379 ! PRKAB2 + +[Term] +id: FPLX:000046 +name: AMPK-gamma +synonym: "PRKAG" EXACT [] +xref: BEL:"PRKAG Family" +xref: RE:R-HSA-2151212 +xref: RE:R-HSA-2316451 +xref: RE:R-HSA-381851 +relationship: part_of FPLX:000031 ! AMPK +relationship: inverse_is_a HGNC:9385 ! PRKAG1 +relationship: inverse_is_a HGNC:9386 ! PRKAG2 +relationship: inverse_is_a HGNC:9387 ! PRKAG3 + +[Term] +id: FPLX:000047 +name: Annexin-II-heterotetramer +synonym: "A2t" EXACT [] +synonym: "annexin A2 heterotetramer" EXACT [] +synonym: "annexin II heterotetramer" EXACT [] +synonym: "ANXA2 heterotetramer" EXACT [] +xref: BEL:"Annexin II Heterotetramer Complex" +xref: RE:R-HSA-5336141 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:537 ! ANXA2 +relationship: has_part HGNC:10487 ! S100A10 + +[Term] +id: FPLX:000048 +name: AP1 +synonym: "AP-1" EXACT [] +synonym: "AP1" EXACT [] +xref: BEL:"AP-1 Complex" +xref: MESH:D018808 +xref: NCIT:C17450 +is_a: FPLX:000000 ! famplex +relationship: has_part FPLX:000173 ! FOS_family +relationship: has_part FPLX:000268 ! JUN_family + +[Term] +id: FPLX:000049 +name: AP2A +xref: IP:IPR017104 +relationship: part_of FPLX:000015 ! Adaptor_protein_II +relationship: inverse_is_a HGNC:561 ! AP2A1 +relationship: inverse_is_a HGNC:562 ! AP2A2 + +[Term] +id: FPLX:000050 +name: APC-C +synonym: "APC/C" EXACT [] +xref: GO:0005680 +xref: MEDSCAN:urn:agi-aopfc:0000571 +xref: MEDSCAN:urn:agi-complex:prophash-dd63d0a558770b12c9149b4955828f35 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:19989 ! ANAPC2 +relationship: has_part HGNC:14452 ! ANAPC11 +relationship: has_part HGNC:19988 ! ANAPC1 +relationship: has_part HGNC:1720 ! CDC16 +relationship: has_part HGNC:1728 ! CDC27 +relationship: has_part HGNC:1724 ! CDC23 +relationship: has_part HGNC:15713 ! ANAPC5 +relationship: has_part HGNC:24077 ! ANAPC10 +relationship: has_part HGNC:24531 ! ANAPC15 +relationship: has_part HGNC:24540 ! ANAPC13 +relationship: has_part HGNC:17839 ! CDC26 +relationship: has_part HGNC:26976 ! ANAPC16 +relationship: has_part HGNC:17380 ! ANAPC7 +relationship: has_part HGNC:19990 ! ANAPC4 + +[Term] +id: FPLX:000051 +name: APOA +synonym: "ApoA" EXACT [] +synonym: "apoA" EXACT [] +synonym: "apolipoprotein (a)" EXACT [] +synonym: "apolipoprotein A" EXACT [] +synonym: "apolipoprotein(A)" EXACT [] +synonym: "apolipoprotein(a)" EXACT [] +xref: BEL:"APOA Family" +xref: NCIT:C105952 +is_a: FPLX:000052 ! Apolipoprotein +relationship: inverse_is_a HGNC:600 ! APOA1 +relationship: inverse_is_a HGNC:601 ! APOA2 +relationship: inverse_is_a HGNC:602 ! APOA4 +relationship: inverse_is_a HGNC:17288 ! APOA5 + +[Term] +id: FPLX:000052 +name: Apolipoprotein +synonym: "Apolipoprotein" EXACT [] +synonym: "apolipoprotein" EXACT [] +synonym: "apolipoproteins" EXACT [] +xref: IP:IPR000074 +xref: MEDSCAN:urn:agi-protfc:apolipoprotein +xref: XFAM:PF01442 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a FPLX:000051 ! APOA +relationship: inverse_is_a HGNC:613 ! APOE + +[Term] +id: FPLX:000053 +name: ARF-GTPase-family +synonym: "ADP ribosylation factor" EXACT [] +synonym: "ARF" EXACT [] +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:660 ! TRIM23 +relationship: inverse_is_a HGNC:652 ! ARF1 +relationship: inverse_is_a HGNC:654 ! ARF3 +relationship: inverse_is_a HGNC:655 ! ARF4 +relationship: inverse_is_a HGNC:658 ! ARF5 +relationship: inverse_is_a HGNC:659 ! ARF6 +relationship: inverse_is_a HGNC:692 ! ARL1 +relationship: inverse_is_a HGNC:693 ! ARL2 +relationship: inverse_is_a HGNC:694 ! ARL3 +relationship: inverse_is_a HGNC:695 ! ARL4A +relationship: inverse_is_a HGNC:698 ! ARL4C +relationship: inverse_is_a HGNC:656 ! ARL4D +relationship: inverse_is_a HGNC:696 ! ARL5A +relationship: inverse_is_a HGNC:23052 ! ARL5B +relationship: inverse_is_a HGNC:31111 ! ARL5C +relationship: inverse_is_a HGNC:13210 ! ARL6 +relationship: inverse_is_a HGNC:25192 ! ARL8A +relationship: inverse_is_a HGNC:25564 ! ARL8B +relationship: inverse_is_a HGNC:23592 ! ARL9 +relationship: inverse_is_a HGNC:22042 ! ARL10 +relationship: inverse_is_a HGNC:24046 ! ARL11 +relationship: inverse_is_a HGNC:31709 ! ARL13A +relationship: inverse_is_a HGNC:25419 ! ARL13B +relationship: inverse_is_a HGNC:22974 ! ARL14 +relationship: inverse_is_a HGNC:25945 ! ARL15 +relationship: inverse_is_a HGNC:27902 ! ARL16 +relationship: inverse_is_a HGNC:24096 ! ARL17A +relationship: inverse_is_a HGNC:32387 ! ARL17B +relationship: inverse_is_a HGNC:662 ! ARFRP1 +relationship: inverse_is_a HGNC:10534 ! SAR1A +relationship: inverse_is_a HGNC:10535 ! SAR1B + +[Term] +id: FPLX:000054 +name: Arp2-3-protein +synonym: "Arp2/3" EXACT [] +xref: BEL:"Arp2/3 Protein Complex" +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:703 ! ARPC1A +relationship: has_part HGNC:704 ! ARPC1B +relationship: has_part HGNC:705 ! ARPC2 +relationship: has_part HGNC:706 ! ARPC3 +relationship: has_part HGNC:707 ! ARPC4 +relationship: has_part HGNC:708 ! ARPC5 +relationship: has_part HGNC:23366 ! ARPC5L + +[Term] +id: FPLX:000055 +name: ARRB +synonym: "b-arrestin" EXACT [] +synonym: "barrestins" EXACT [] +xref: BEL:"ARRB Family" +xref: RE:R-HSA-1911410 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:711 ! ARRB1 +relationship: inverse_is_a HGNC:712 ! ARRB2 + +[Term] +id: FPLX:000056 +name: ATG4 +synonym: "ATG4" EXACT [] +synonym: "Atg4" EXACT [] +xref: RE:R-HSA-5682664 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:16489 ! ATG4A +relationship: inverse_is_a HGNC:20790 ! ATG4B +relationship: inverse_is_a HGNC:16040 ! ATG4C +relationship: inverse_is_a HGNC:20789 ! ATG4D + +[Term] +id: FPLX:000057 +name: ATP1A +synonym: "ATP1A" EXACT [] +synonym: "ATPase Na+/K+ transporting subunit alpha" EXACT [] +synonym: "ATPase Na+/K+ transporting subunit beta" EXACT [] +synonym: "ATPase Na+/K+ transporting subunit α" EXACT [] +synonym: "ATPase Na+/K+ transporting subunit β" EXACT [] +synonym: "Na/K ATPase alpha" EXACT [] +synonym: "Na/K ATPase α" EXACT [] +xref: RE:R-HSA-936779 +relationship: part_of FPLX:000303 ! Na_K_ATPase +relationship: inverse_is_a HGNC:799 ! ATP1A1 +relationship: inverse_is_a HGNC:800 ! ATP1A2 +relationship: inverse_is_a HGNC:801 ! ATP1A3 +relationship: inverse_is_a HGNC:14073 ! ATP1A4 + +[Term] +id: FPLX:000058 +name: ATP1B +synonym: "Na,K-ATPase beta subunit" EXACT [] +synonym: "Na,K-ATPase β subunit" EXACT [] +synonym: "ATP1B" EXACT [] +xref: RE:R-HSA-936820 +relationship: part_of FPLX:000303 ! Na_K_ATPase +relationship: inverse_is_a HGNC:804 ! ATP1B1 +relationship: inverse_is_a HGNC:805 ! ATP1B2 +relationship: inverse_is_a HGNC:806 ! ATP1B3 +relationship: inverse_is_a HGNC:808 ! ATP1B4 + +[Term] +id: FPLX:000059 +name: ATP5G +synonym: "ATP synthase H + transporting mitochondrial F0 complex subunit G" EXACT [] +xref: BEL:"ATP5G Family" +xref: IP:IPR000454 +xref: IP:IPR020537 +relationship: part_of FPLX:000060 ! ATP_synthase +relationship: inverse_is_a HGNC:841 ! ATP5MC1 +relationship: inverse_is_a HGNC:842 ! ATP5MC2 +relationship: inverse_is_a HGNC:843 ! ATP5MC3 + +[Term] +id: FPLX:000060 +name: ATP-synthase +synonym: "ATP synthase" EXACT [] +xref: BEL:"Proton Transporting ATP Synthase Complex" +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:823 ! ATP5F1A +relationship: has_part HGNC:830 ! ATP5F1B +relationship: has_part HGNC:833 ! ATP5F1C +relationship: has_part HGNC:837 ! ATP5F1D +relationship: has_part HGNC:838 ! ATP5F1E +relationship: has_part HGNC:30889 ! ATP5MD +relationship: has_part HGNC:846 ! ATP5ME +relationship: has_part HGNC:848 ! ATP5MF +relationship: has_part HGNC:14247 ! ATP5MG +relationship: has_part HGNC:1188 ! ATP5MPL +relationship: has_part HGNC:7414 ! MT-ATP6 +relationship: has_part HGNC:7415 ! MT-ATP8 +relationship: has_part HGNC:840 ! ATP5PB +relationship: has_part HGNC:845 ! ATP5PD +relationship: has_part HGNC:847 ! ATP5PF +relationship: has_part HGNC:850 ! ATP5PO +relationship: has_part HGNC:871 ! ATP5IF1 +relationship: has_part FPLX:000059 ! ATP5G + +[Term] +id: FPLX:000061 +name: Augmin +synonym: "Augmin" EXACT [] +synonym: "HAUS" EXACT [] +synonym: "HAUS complex" EXACT [] +xref: GO:0070652 +xref: HGNC_GROUP:581 +xref: RE:R-HSA-8855211 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:25174 ! HAUS1 +relationship: has_part HGNC:25530 ! HAUS2 +relationship: has_part HGNC:28719 ! HAUS3 +relationship: has_part HGNC:20163 ! HAUS4 +relationship: has_part HGNC:29130 ! HAUS5 +relationship: has_part HGNC:25948 ! HAUS6 +relationship: has_part HGNC:32979 ! HAUS7 +relationship: has_part HGNC:30532 ! HAUS8 + +[Term] +id: FPLX:000062 +name: AXIN +synonym: "Axin" EXACT [] +synonym: "hAxin" EXACT [] +xref: BEL:"AXIN Family" +xref: IP:IPR014936 +xref: IP:IPR032101 +xref: RE:R-HSA-3640819 +xref: RE:R-HSA-3640863 +xref: RE:R-HSA-3772502 +xref: RE:R-HSA-4641132 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:903 ! AXIN1 +relationship: inverse_is_a HGNC:904 ! AXIN2 + +[Term] +id: FPLX:000063 +name: B3GAT +synonym: "B3GAT" EXACT [] +synonym: "Beta-1,3-glucuronyltransferase" EXACT [] +synonym: "Beta-1,3-glucuronyltransferases" EXACT [] +synonym: "beta-1,3-glucuronyltransferase" EXACT [] +synonym: "beta-1,3-glucuronyltransferases" EXACT [] +is_a: FPLX:000198 ! Glycosyltransferase +relationship: inverse_is_a HGNC:921 ! B3GAT1 +relationship: inverse_is_a HGNC:922 ! B3GAT2 +relationship: inverse_is_a HGNC:923 ! B3GAT3 + +[Term] +id: FPLX:000064 +name: BCKDC +synonym: "BCKDC" EXACT [] +synonym: "BCKDH" EXACT [] +synonym: "branched-chain alpha-keto acid dehydrogenase complex" EXACT [] +synonym: "branched-chain alpha-ketoacid dehydrogenase complex" EXACT [] +synonym: "branched-chain α-keto acid dehydrogenase complex" EXACT [] +synonym: "branched-chain α-ketoacid dehydrogenase complex" EXACT [] +xref: BEL:"Branched Chain Alpha Keto Acid Dehydrogenase Complex" +xref: RE:R-HSA-5693120 +xref: RE:R-HSA-6792583 +xref: RE:R-HSA-70019 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:986 ! BCKDHA +relationship: has_part HGNC:987 ! BCKDHB +relationship: has_part HGNC:2698 ! DBT +relationship: has_part HGNC:2898 ! DLD + +[Term] +id: FPLX:000065 +name: Beta-3-4-GTF +synonym: "Beta 3-glycosyltransferase" EXACT [] +synonym: "Beta 3-glycosyltransferases" EXACT [] +synonym: "beta 3-glycosyltransferase" EXACT [] +synonym: "beta 3-glycosyltransferases" EXACT [] +synonym: "Beta 4-glycosyltransferase" EXACT [] +synonym: "Beta 4-glycosyltransferases" EXACT [] +synonym: "beta 4-glycosyltransferase" EXACT [] +synonym: "beta 4-glycosyltransferases" EXACT [] +is_a: FPLX:000198 ! Glycosyltransferase +relationship: inverse_is_a HGNC:918 ! B3GALNT1 +relationship: inverse_is_a HGNC:28596 ! B3GALNT2 +relationship: inverse_is_a HGNC:20207 ! B3GLCT +relationship: inverse_is_a HGNC:916 ! B3GALT1 +relationship: inverse_is_a HGNC:917 ! B3GALT2 +relationship: inverse_is_a HGNC:919 ! B3GALT4 +relationship: inverse_is_a HGNC:920 ! B3GALT5 +relationship: inverse_is_a HGNC:17978 ! B3GALT6 +relationship: inverse_is_a HGNC:15629 ! B3GNT2 +relationship: inverse_is_a HGNC:13528 ! B3GNT3 +relationship: inverse_is_a HGNC:15683 ! B3GNT4 +relationship: inverse_is_a HGNC:15684 ! B3GNT5 +relationship: inverse_is_a HGNC:24141 ! B3GNT6 +relationship: inverse_is_a HGNC:18811 ! B3GNT7 +relationship: inverse_is_a HGNC:24139 ! B3GNT8 +relationship: inverse_is_a HGNC:28714 ! B3GNT9 +relationship: inverse_is_a HGNC:24291 ! CHPF +relationship: inverse_is_a HGNC:29270 ! CHPF2 +relationship: inverse_is_a HGNC:17198 ! CHSY1 +relationship: inverse_is_a HGNC:24293 ! CHSY3 +relationship: inverse_is_a HGNC:24337 ! C1GALT1 +relationship: inverse_is_a HGNC:6560 ! LFNG +relationship: inverse_is_a HGNC:7038 ! MFNG +relationship: inverse_is_a HGNC:9974 ! RFNG +relationship: inverse_is_a HGNC:4117 ! B4GALNT1 +relationship: inverse_is_a HGNC:24136 ! B4GALNT2 +relationship: inverse_is_a HGNC:24137 ! B4GALNT3 +relationship: inverse_is_a HGNC:26315 ! B4GALNT4 +relationship: inverse_is_a HGNC:924 ! B4GALT1 +relationship: inverse_is_a HGNC:925 ! B4GALT2 +relationship: inverse_is_a HGNC:926 ! B4GALT3 +relationship: inverse_is_a HGNC:927 ! B4GALT4 +relationship: inverse_is_a HGNC:928 ! B4GALT5 +relationship: inverse_is_a HGNC:929 ! B4GALT6 +relationship: inverse_is_a HGNC:930 ! B4GALT7 +relationship: inverse_is_a HGNC:24290 ! CSGALNACT1 +relationship: inverse_is_a HGNC:24292 ! CSGALNACT2 + +[Term] +id: FPLX:000066 +name: BIRC +synonym: "BIRs" EXACT [] +xref: BEL:"BIRC Family" +xref: IP:IPR001370 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:590 ! BIRC2 +relationship: inverse_is_a HGNC:591 ! BIRC3 +relationship: inverse_is_a HGNC:593 ! BIRC5 +relationship: inverse_is_a HGNC:13516 ! BIRC6 +relationship: inverse_is_a HGNC:13702 ! BIRC7 +relationship: inverse_is_a HGNC:14878 ! BIRC8 +relationship: inverse_is_a HGNC:7634 ! NAIP +relationship: inverse_is_a HGNC:592 ! XIAP + +[Term] +id: FPLX:000067 +name: BMP +synonym: "BMP" EXACT [] +xref: BEL:"BMP Family" +xref: NCIT:C17274 +xref: XFAM:PF02608 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:1067 ! BMP1 +relationship: inverse_is_a HGNC:1069 ! BMP2 +relationship: inverse_is_a HGNC:1070 ! BMP3 +relationship: inverse_is_a HGNC:1071 ! BMP4 +relationship: inverse_is_a HGNC:1072 ! BMP5 +relationship: inverse_is_a HGNC:1073 ! BMP6 +relationship: inverse_is_a HGNC:1074 ! BMP7 +relationship: inverse_is_a HGNC:21650 ! BMP8A +relationship: inverse_is_a HGNC:1075 ! BMP8B +relationship: inverse_is_a HGNC:20869 ! BMP10 +relationship: inverse_is_a HGNC:1068 ! BMP15 +relationship: inverse_is_a HGNC:4214 ! GDF1 +relationship: inverse_is_a HGNC:4217 ! GDF2 +relationship: inverse_is_a HGNC:4218 ! GDF3 +relationship: inverse_is_a HGNC:4220 ! GDF5 +relationship: inverse_is_a HGNC:4221 ! GDF6 +relationship: inverse_is_a HGNC:4222 ! GDF7 + +[Term] +id: FPLX:000068 +name: BMP-receptor +xref: SIGNOR:SIGNOR-PF9 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a FPLX:000069 ! BMP_receptor_type_I +relationship: inverse_is_a FPLX:000070 ! BMP_receptor_type_II + +[Term] +id: FPLX:000069 +name: BMP-receptor-type-I +synonym: "BMP Receptor Type I" EXACT [] +synonym: "BMP type I receptor" EXACT [] +synonym: "bone morphogenetic protein I receptor" EXACT [] +synonym: "bone morphogenetic protein receptor 1" EXACT [] +synonym: "bone morphogenetic protein receptor type I" EXACT [] +synonym: "bone morphogenetic protein type I receptors" EXACT [] +synonym: "BRI" EXACT [] +xref: BEL:"BMP Receptor Type I Family" +xref: MEDSCAN:urn:agi-protfc:bone%20morphogenetic%20protein%20I%20receptor +is_a: FPLX:000068 ! BMP_receptor +relationship: inverse_is_a HGNC:171 ! ACVR1 +relationship: inverse_is_a HGNC:1076 ! BMPR1A +relationship: inverse_is_a HGNC:1077 ! BMPR1B + +[Term] +id: FPLX:000070 +name: BMP-receptor-type-II +synonym: "BMP Receptor Type II" EXACT [] +synonym: "BMP type II receptor" EXACT [] +synonym: "bone morphogenetic protein receptor 2" EXACT [] +synonym: "bone morphogenetic protein receptor type II" EXACT [] +synonym: "bone morphogenetic protein type II receptors" EXACT [] +synonym: "BRII" EXACT [] +xref: BEL:"BMP Receptor Type II Family" +xref: RE:R-HSA-201465 +xref: RE:R-HSA-201804 +is_a: FPLX:000068 ! BMP_receptor +relationship: inverse_is_a HGNC:173 ! ACVR2A +relationship: inverse_is_a HGNC:174 ! ACVR2B +relationship: inverse_is_a HGNC:1078 ! BMPR2 + +[Term] +id: FPLX:000071 +name: BRCA +synonym: "BRCA" EXACT [] +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:1100 ! BRCA1 +relationship: inverse_is_a HGNC:1101 ! BRCA2 + +[Term] +id: FPLX:000072 +name: C1 +synonym: "c1 complex" EXACT [] +synonym: "C1" EXACT [] +synonym: "C1-complex" EXACT [] +xref: BEL:"C1 Complex" +xref: RE:R-HSA-173584 +xref: RE:R-HSA-173615 +xref: RE:R-HSA-173617 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:1241 ! C1QA +relationship: has_part HGNC:1242 ! C1QB +relationship: has_part HGNC:1245 ! C1QC +relationship: has_part HGNC:1246 ! C1R +relationship: has_part HGNC:1247 ! C1S + +[Term] +id: FPLX:000073 +name: C1q +synonym: "C1q" EXACT [] +xref: BEL:"C1q Complex" +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:1241 ! C1QA +relationship: has_part HGNC:1242 ! C1QB + +[Term] +id: FPLX:000074 +name: Cadherin +synonym: "cadherin" EXACT [] +xref: BEL:"CDH Family" +xref: MEDSCAN:urn:agi-complex:prophash-8a9e47ee0ee03d8d8b6e029e2fba6896 +xref: MEDSCAN:urn:agi-protfc:cadherin +xref: NCIT:C16373 +xref: XFAM:PF00028 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:1748 ! CDH1 +relationship: inverse_is_a HGNC:1749 ! CDH10 +relationship: inverse_is_a HGNC:1750 ! CDH11 +relationship: inverse_is_a HGNC:1751 ! CDH12 +relationship: inverse_is_a HGNC:1753 ! CDH13 +relationship: inverse_is_a HGNC:1754 ! CDH15 +relationship: inverse_is_a HGNC:1755 ! CDH16 +relationship: inverse_is_a HGNC:1756 ! CDH17 +relationship: inverse_is_a HGNC:1757 ! CDH18 +relationship: inverse_is_a HGNC:1758 ! CDH19 +relationship: inverse_is_a HGNC:1759 ! CDH2 +relationship: inverse_is_a HGNC:1760 ! CDH20 +relationship: inverse_is_a HGNC:13251 ! CDH22 +relationship: inverse_is_a HGNC:14265 ! CDH24 +relationship: inverse_is_a HGNC:1762 ! CDH3 +relationship: inverse_is_a HGNC:1763 ! CDH4 +relationship: inverse_is_a HGNC:1764 ! CDH5 +relationship: inverse_is_a HGNC:1765 ! CDH6 +relationship: inverse_is_a HGNC:1766 ! CDH7 +relationship: inverse_is_a HGNC:1767 ! CDH8 +relationship: inverse_is_a HGNC:1768 ! CDH9 + +[Term] +id: FPLX:000075 +name: CALM +synonym: "Calmodulin" EXACT [] +synonym: "calmodulin" EXACT [] +synonym: "CaM" EXACT [] +xref: BEL:"CALM Family" +xref: MEDSCAN:urn:agi-aopfc:0000452 +xref: MEDSCAN:urn:agi-complex:prophash-f7e292d6e30998b81cf5f772ab430f11 +xref: NCIT:C16375 +xref: NEXTPROT-FAMILY:00440 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:1442 ! CALM1 +relationship: inverse_is_a HGNC:1445 ! CALM2 +relationship: inverse_is_a HGNC:1449 ! CALM3 + +[Term] +id: FPLX:000076 +name: CAMK +synonym: "CaMK family" EXACT [] +synonym: "CaMK" EXACT [] +xref: BEL:"CAMK Family" +xref: ECCODE:2.7.11.17 +xref: NEXTPROT-FAMILY:03072 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:1459 ! CAMK1 +relationship: inverse_is_a HGNC:19341 ! CAMK1D +relationship: inverse_is_a HGNC:14585 ! CAMK1G +relationship: inverse_is_a HGNC:1464 ! CAMK4 +relationship: inverse_is_a FPLX:000078 ! CAMK2_family + +[Term] +id: FPLX:000077 +name: CAMK2-complex +synonym: "Ca(2+)-calmodulin-dependent protein kinase II" EXACT [] +synonym: "Ca(2+)/calmodulin-dependent kinase II" EXACT [] +synonym: "CaM kinase II" EXACT [] +synonym: "CaMK II" EXACT [] +synonym: "CaMKII" EXACT [] +xref: BEL:"CAMK2 Complex" +xref: IP:IPR013543 +xref: MEDSCAN:urn:agi-complex:CaM%20kinase%20II +xref: RE:R-HSA-417004 +xref: RE:R-HSA-432792 +xref: RE:R-HSA-444796 +xref: RE:R-HSA-445374 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:1460 ! CAMK2A +relationship: has_part HGNC:1461 ! CAMK2B +relationship: has_part HGNC:1462 ! CAMK2D +relationship: has_part HGNC:1463 ! CAMK2G + +[Term] +id: FPLX:000078 +name: CAMK2-family +synonym: "calmodulindependent kinase II" EXACT [] +synonym: "CAMK2" EXACT [] +synonym: "CaMK2" EXACT [] +synonym: "CAMKII" EXACT [] +xref: BEL:"CAMK2 Family" +xref: IP:IPR013543 +xref: RE:R-HSA-417004 +xref: RE:R-HSA-432792 +xref: RE:R-HSA-444796 +xref: RE:R-HSA-445374 +is_a: FPLX:000076 ! CAMK +relationship: inverse_is_a HGNC:1460 ! CAMK2A +relationship: inverse_is_a HGNC:1461 ! CAMK2B +relationship: inverse_is_a HGNC:1462 ! CAMK2D +relationship: inverse_is_a HGNC:1463 ! CAMK2G + +[Term] +id: FPLX:000079 +name: CAPN +synonym: "calpain" EXACT [] +xref: BEL:"CAPN Family" +xref: GO:0004198 +xref: IP:IPR022684 +xref: NCIT:C16377 +xref: RE:R-HSA-8848649 +xref: RE:R-HSA-8848668 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:1476 ! CAPN1 +relationship: inverse_is_a HGNC:1477 ! CAPN10 +relationship: inverse_is_a HGNC:1478 ! CAPN11 +relationship: inverse_is_a HGNC:13249 ! CAPN12 +relationship: inverse_is_a HGNC:16663 ! CAPN13 +relationship: inverse_is_a HGNC:16664 ! CAPN14 +relationship: inverse_is_a HGNC:1479 ! CAPN2 +relationship: inverse_is_a HGNC:1480 ! CAPN3 +relationship: inverse_is_a HGNC:1482 ! CAPN5 +relationship: inverse_is_a HGNC:1483 ! CAPN6 +relationship: inverse_is_a HGNC:1484 ! CAPN7 +relationship: inverse_is_a HGNC:1486 ! CAPN9 +relationship: inverse_is_a HGNC:11182 ! CAPN15 +relationship: inverse_is_a HGNC:1485 ! CAPN8 + +[Term] +id: FPLX:000080 +name: Carboxylesterase +synonym: "carboxylesterase" EXACT [] +synonym: "carboxylesterases" EXACT [] +xref: BEL:"Carboxylesterase Family" +xref: ECCODE:3.1.1.1 +xref: NCIT:C112051 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:1863 ! CES1 +relationship: inverse_is_a HGNC:1864 ! CES2 +relationship: inverse_is_a HGNC:1865 ! CES3 +relationship: inverse_is_a HGNC:26741 ! CES4A +relationship: inverse_is_a HGNC:26459 ! CES5A + +[Term] +id: FPLX:000081 +name: Caspase +synonym: "caspase" EXACT [] +synonym: "caspases" EXACT [] +xref: BEL:"CASP Family" +xref: GO:0004199 +xref: IP:IPR002138 +xref: IP:IPR033139 +xref: MESH:D020169 +xref: NCIT:C18153 +xref: XFAM:PF00656 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:1499 ! CASP1 +relationship: inverse_is_a HGNC:1503 ! CASP2 +relationship: inverse_is_a HGNC:1505 ! CASP4 +relationship: inverse_is_a HGNC:1506 ! CASP5 +relationship: inverse_is_a HGNC:1507 ! CASP6 +relationship: inverse_is_a HGNC:1509 ! CASP8 +relationship: inverse_is_a HGNC:1511 ! CASP9 +relationship: inverse_is_a HGNC:1500 ! CASP10 +relationship: inverse_is_a HGNC:19004 ! CASP12 +relationship: inverse_is_a HGNC:1502 ! CASP14 +relationship: inverse_is_a FPLX:000082 ! Caspase_3_7 + +[Term] +id: FPLX:000082 +name: Caspase-3-7 +synonym: "caspase-3/7" EXACT [] +xref: RE:R-HSA-202877 +is_a: FPLX:000081 ! Caspase +relationship: inverse_is_a HGNC:1504 ! CASP3 +relationship: inverse_is_a HGNC:1508 ! CASP7 + +[Term] +id: FPLX:000083 +name: CAV +synonym: "Caveolin" EXACT [] +synonym: "caveolin" EXACT [] +xref: BEL:"CAV Family" +xref: IP:IPR001612 +xref: IP:IPR018361 +xref: MEDSCAN:urn:agi-protfc:caveolin +xref: NEXTPROT-FAMILY:00489 +xref: XFAM:PF01146 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:1527 ! CAV1 +relationship: inverse_is_a HGNC:1528 ! CAV2 +relationship: inverse_is_a HGNC:1529 ! CAV3 + +[Term] +id: FPLX:000084 +name: CBF3 +def: "SKP1 (together with SKP2) was identified as an essential component of the cyclin A-CDK2 S phase kinase complex" [interpro:IPR016072] +synonym: "CBF3 complex" EXACT [] +synonym: "CBF3" EXACT [] +synonym: "kinetochore centromere binding factor 3" EXACT [] +xref: BEL:"CBF3 Complex" +xref: GO:0031518 +xref: IP:IPR016072 +xref: IP:IPR016897 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:10899 ! SKP1 + +[Term] +id: FPLX:000085 +name: CCT-complex +synonym: "CCT complex" EXACT [] +synonym: "CCT" EXACT [] +synonym: "chaperonin containing TCP-1" EXACT [] +synonym: "chaperonin" EXACT [] +synonym: "chaperonin-containing t-complex polypeptide 1" EXACT [] +synonym: "chaperonin-containing TCP1 complex" EXACT [] +synonym: "TRiC" EXACT [] +xref: BEL:"CCT Complex" +xref: GO:0005832 +xref: IP:IPR002194 +xref: MEDSCAN:urn:agi-complex:prophash-cd6413d79122d5489ee4b4e339245b61 +xref: RE:R-HSA-390455 +xref: RE:R-HSA-390474 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:1615 ! CCT2 +relationship: has_part HGNC:1616 ! CCT3 +relationship: has_part HGNC:1617 ! CCT4 +relationship: has_part HGNC:1618 ! CCT5 +relationship: has_part HGNC:1620 ! CCT6A +relationship: has_part HGNC:1621 ! CCT6B +relationship: has_part HGNC:1622 ! CCT7 +relationship: has_part HGNC:1623 ! CCT8 +relationship: has_part HGNC:11655 ! TCP1 + +[Term] +id: FPLX:000086 +name: CD16 +synonym: "CD16" EXACT [] +xref: BEL:"CD16 Family" +xref: NCIT:C17487 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:3619 ! FCGR3A +relationship: inverse_is_a HGNC:3620 ! FCGR3B + +[Term] +id: FPLX:000087 +name: CD3 +synonym: "CD3" EXACT [] +xref: BEL:"CD3 Complex" +xref: MEDSCAN:urn:agi-complex:CD3%20complex +xref: NCIT:C38897 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:1677 ! CD247 +relationship: has_part HGNC:1673 ! CD3D +relationship: has_part HGNC:1674 ! CD3E +relationship: has_part HGNC:1675 ! CD3G + +[Term] +id: FPLX:000088 +name: CD32 +synonym: "CD32" EXACT [] +xref: BEL:"CD32 Family" +xref: NCIT:C18308 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:3616 ! FCGR2A +relationship: inverse_is_a HGNC:3618 ! FCGR2B +relationship: inverse_is_a HGNC:15626 ! FCGR2C + +[Term] +id: FPLX:000089 +name: CD64 +synonym: "CD64" EXACT [] +xref: BEL:"CD64 Family" +xref: RE:R-HSA-1031694 +xref: RE:R-HSA-1236898 +xref: RE:R-HSA-1236905 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:3613 ! FCGR1A +relationship: inverse_is_a HGNC:3614 ! FCGR1B + +[Term] +id: FPLX:000090 +name: CD8 +synonym: "CD8" EXACT [] +xref: MEDSCAN:urn:agi-complex:CD8 +xref: RE:R-HSA-198899 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:1706 ! CD8A +relationship: inverse_is_a HGNC:1707 ! CD8B + +[Term] +id: FPLX:000091 +name: CDC25 +synonym: "CDC25 family" EXACT [] +synonym: "Cdc25 phosphatases" EXACT [] +synonym: "CDC25" EXACT [] +synonym: "Cdc25" EXACT [] +xref: BEL:"CDC25 Family" +xref: IP:IPR000751 +xref: MEDSCAN:urn:agi-aopfc:0000551 +xref: RE:R-HSA-170108 +xref: RE:R-HSA-69261 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:1725 ! CDC25A +relationship: inverse_is_a HGNC:1726 ! CDC25B +relationship: inverse_is_a HGNC:1727 ! CDC25C + +[Term] +id: FPLX:000092 +name: CDK +synonym: "CDK" EXACT [] +synonym: "Cdk" EXACT [] +synonym: "CDKs" EXACT [] +xref: ECCODE:2.7.11.22 +xref: MEDSCAN:urn:agi-complex:prophash-4dda466320b1a32b046d823accadbaee +xref: MESH:D018844 +xref: NCIT:C17767 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:1781 ! CDKL1 +relationship: inverse_is_a HGNC:1782 ! CDKL2 +relationship: inverse_is_a HGNC:15483 ! CDKL3 +relationship: inverse_is_a HGNC:19287 ! CDKL4 +relationship: inverse_is_a HGNC:11411 ! CDKL5 +relationship: inverse_is_a FPLX:000093 ! CDK1_2 +relationship: inverse_is_a HGNC:1772 ! CDK3 +relationship: inverse_is_a HGNC:1773 ! CDK4 +relationship: inverse_is_a HGNC:1774 ! CDK5 +relationship: inverse_is_a HGNC:1777 ! CDK6 +relationship: inverse_is_a HGNC:1778 ! CDK7 +relationship: inverse_is_a HGNC:1779 ! CDK8 +relationship: inverse_is_a HGNC:1780 ! CDK9 +relationship: inverse_is_a HGNC:1770 ! CDK10 +relationship: inverse_is_a HGNC:1730 ! CDK11A +relationship: inverse_is_a HGNC:1729 ! CDK11B +relationship: inverse_is_a HGNC:24224 ! CDK12 +relationship: inverse_is_a HGNC:1733 ! CDK13 +relationship: inverse_is_a HGNC:8883 ! CDK14 +relationship: inverse_is_a HGNC:14434 ! CDK15 +relationship: inverse_is_a HGNC:8749 ! CDK16 +relationship: inverse_is_a HGNC:8750 ! CDK17 +relationship: inverse_is_a HGNC:8751 ! CDK18 +relationship: inverse_is_a HGNC:19338 ! CDK19 +relationship: inverse_is_a HGNC:21420 ! CDK20 + +[Term] +id: FPLX:000093 +name: CDK1-2 +synonym: "CDK1/2" EXACT [] +synonym: "cdk1/2" EXACT [] +synonym: "Cdk1/2" EXACT [] +is_a: FPLX:000092 ! CDK +relationship: inverse_is_a HGNC:1722 ! CDK1 +relationship: inverse_is_a HGNC:1771 ! CDK2 + +[Term] +id: FPLX:000094 +name: CDKN +synonym: "CDKN" EXACT [] +synonym: "CKI" EXACT [] +synonym: "cyclin dependent kinase inhibitors" EXACT [] +synonym: "cyclin-dependent kinase inhibitor" EXACT [] +synonym: "cyclin-dependent protein kinase inhibitors" EXACT [] +xref: NCIT:C18492 +xref: XFAM:PF02234 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a FPLX:000095 ! CDKN1 +relationship: inverse_is_a FPLX:000096 ! CDKN2 +relationship: inverse_is_a HGNC:1791 ! CDKN3 + +[Term] +id: FPLX:000095 +name: CDKN1 +synonym: "CDKN1" EXACT [] +xref: IP:IPR003175 +xref: RE:R-HSA-8941923 +xref: RE:R-HSA-8942604 +xref: RE:R-HSA-8948131 +is_a: FPLX:000094 ! CDKN +relationship: inverse_is_a HGNC:1784 ! CDKN1A +relationship: inverse_is_a HGNC:1785 ! CDKN1B +relationship: inverse_is_a HGNC:1786 ! CDKN1C + +[Term] +id: FPLX:000096 +name: CDKN2 +synonym: "CDKN2" EXACT [] +is_a: FPLX:000094 ! CDKN +relationship: inverse_is_a HGNC:1787 ! CDKN2A +relationship: inverse_is_a HGNC:1788 ! CDKN2B +relationship: inverse_is_a HGNC:1789 ! CDKN2C +relationship: inverse_is_a HGNC:1790 ! CDKN2D + +[Term] +id: FPLX:000097 +name: CEBP +synonym: "C/EBP" EXACT [] +synonym: "CCAAT/enhancer binding protein" EXACT [] +xref: BEL:"CEBP Family" +xref: NEXTPROT-FAMILY:00406 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:1833 ! CEBPA +relationship: inverse_is_a HGNC:1834 ! CEBPB +relationship: inverse_is_a HGNC:1835 ! CEBPD +relationship: inverse_is_a HGNC:1837 ! CEBPG +relationship: inverse_is_a HGNC:1836 ! CEBPE + +[Term] +id: FPLX:000098 +name: CHEK +synonym: "checkpoint kinase" EXACT [] +synonym: "Chk1/2" EXACT [] +xref: MEDSCAN:urn:agi-protfc:checkpoint%20kinase +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:1925 ! CHEK1 +relationship: inverse_is_a HGNC:16627 ! CHEK2 + +[Term] +id: FPLX:000099 +name: Chemokine +synonym: "chemokine" EXACT [] +synonym: "chemokines" EXACT [] +xref: MEDSCAN:urn:agi-aopfc:0000391 +xref: NCIT:C20466 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a FPLX:000128 ! CXCL_ELR_negative +relationship: inverse_is_a FPLX:000129 ! CXCL_ELR_positive + +[Term] +id: FPLX:000100 +name: Chemokine-receptor +synonym: "chemoattractant receptor" EXACT [] +xref: BEL:"Chemokine Receptor Family" +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:1565 ! ACKR2 +relationship: inverse_is_a HGNC:1602 ! CCR1 +relationship: inverse_is_a HGNC:4474 ! CCR10 +relationship: inverse_is_a HGNC:1603 ! CCR2 +relationship: inverse_is_a HGNC:1604 ! CCR3 +relationship: inverse_is_a HGNC:1605 ! CCR4 +relationship: inverse_is_a HGNC:1606 ! CCR5 +relationship: inverse_is_a HGNC:1607 ! CCR6 +relationship: inverse_is_a HGNC:1608 ! CCR7 +relationship: inverse_is_a HGNC:1609 ! CCR8 +relationship: inverse_is_a HGNC:1610 ! CCR9 +relationship: inverse_is_a HGNC:1611 ! ACKR4 +relationship: inverse_is_a HGNC:1612 ! CCRL2 +relationship: inverse_is_a HGNC:2558 ! CX3CR1 +relationship: inverse_is_a HGNC:6026 ! CXCR1 +relationship: inverse_is_a HGNC:6027 ! CXCR2 +relationship: inverse_is_a HGNC:4540 ! CXCR3 +relationship: inverse_is_a HGNC:2561 ! CXCR4 +relationship: inverse_is_a HGNC:1060 ! CXCR5 +relationship: inverse_is_a HGNC:16647 ! CXCR6 +relationship: inverse_is_a HGNC:23692 ! ACKR3 +relationship: inverse_is_a HGNC:1625 ! XCR1 + +[Term] +id: FPLX:000101 +name: Cholinesterase +synonym: "choline esterase" EXACT [] +synonym: "cholinesterase" EXACT [] +xref: BEL:"Cholinesterase Family" +xref: IP:IPR000997 +xref: IP:IPR014788 +xref: RE:R-HSA-2990868 +xref: RE:R-HSA-3640837 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:108 ! ACHE +relationship: inverse_is_a HGNC:983 ! BCHE + +[Term] +id: FPLX:000102 +name: CHRM +synonym: "acetylcholine receptor" EXACT [] +xref: BEL:"CHRM Family" +xref: IP:IPR000995 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:1950 ! CHRM1 +relationship: inverse_is_a HGNC:1951 ! CHRM2 +relationship: inverse_is_a HGNC:1952 ! CHRM3 +relationship: inverse_is_a HGNC:1953 ! CHRM4 +relationship: inverse_is_a HGNC:1954 ! CHRM5 + +[Term] +id: FPLX:000103 +name: CHRN +synonym: "nAChR" EXACT [] +synonym: "nicotine class acetylcholine receptors" EXACT [] +synonym: "nicotinic acetylcholine receptor" EXACT [] +xref: BEL:"CHRN Complex" +xref: GO:0016904 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:1956 ! CHRNA2 +relationship: has_part HGNC:1957 ! CHRNA3 +relationship: has_part HGNC:1958 ! CHRNA4 +relationship: has_part HGNC:1959 ! CHRNA5 +relationship: has_part HGNC:15963 ! CHRNA6 +relationship: has_part HGNC:1960 ! CHRNA7 +relationship: has_part HGNC:1962 ! CHRNB2 +relationship: has_part HGNC:1963 ! CHRNB3 +relationship: has_part HGNC:1964 ! CHRNB4 + +[Term] +id: FPLX:000104 +name: CK2 +synonym: "casein kinase 2" EXACT [] +synonym: "casein kinase II complex" EXACT [] +synonym: "casein kinase II" EXACT [] +synonym: "CK2" EXACT [] +xref: BEL:"CK II Complex" +xref: GO:0005956 +xref: NCIT:C107559 +xref: NEXTPROT-FAMILY:03101 +xref: RE:R-HSA-201711 +xref: RE:R-HSA-6805066 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:2457 ! CSNK2A1 +relationship: has_part HGNC:2459 ! CSNK2A2 +relationship: has_part HGNC:2460 ! CSNK2B + +[Term] +id: FPLX:000105 +name: Clathrin +synonym: "clathrin coat" EXACT [] +synonym: "clathrin" EXACT [] +xref: BEL:"Clathrin Complex" +xref: GO:0016190 +xref: RE:R-HSA-5138439 +xref: RE:R-HSA-5138447 +xref: RE:R-HSA-5333713 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:2090 ! CLTA +relationship: has_part HGNC:2091 ! CLTB +relationship: has_part HGNC:2092 ! CLTC + +[Term] +id: FPLX:000106 +name: CNKSR +synonym: "CNKSR" EXACT [] +synonym: "connector enhancer of kinase suppressor of ras" EXACT [] +xref: NEXTPROT-FAMILY:00653 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:19700 ! CNKSR1 +relationship: inverse_is_a HGNC:19701 ! CNKSR2 + +[Term] +id: FPLX:000107 +name: Cofilin +synonym: "cofilin" EXACT [] +xref: IP:IPR017904 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:1874 ! CFL1 +relationship: inverse_is_a HGNC:1875 ! CFL2 +relationship: inverse_is_a HGNC:15750 ! DSTN + +[Term] +id: FPLX:000108 +name: Cohesin +synonym: "cohesin complex" EXACT [] +synonym: "cohesin" EXACT [] +xref: BEL:"Cohesin Complex" +xref: GO:0008278 +xref: GO:0008279 +xref: XFAM:PF00963 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:9811 ! RAD21 +relationship: has_part HGNC:2468 ! SMC3 + +[Term] +id: FPLX:000109 +name: COL1 +synonym: "collagen type I" EXACT [] +synonym: "Type I collagen" EXACT [] +synonym: "type I collagen" EXACT [] +xref: BEL:"COL1 Family" +xref: GO:0005584 +xref: NCIT:C124129 +xref: RE:R-HSA-2089970 +xref: RE:R-HSA-2396039 +xref: RE:R-HSA-2396161 +xref: RE:R-HSA-2396179 +xref: RE:R-HSA-2396183 +xref: RE:R-HSA-2396256 +xref: RE:R-HSA-2396260 +xref: RE:R-HSA-2396334 +xref: RE:R-HSA-2396451 +xref: RE:R-HSA-2396456 +xref: RE:R-HSA-2396478 +xref: RE:R-HSA-2399520 +xref: RE:R-HSA-2428941 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:2197 ! COL1A1 +relationship: inverse_is_a HGNC:2198 ! COL1A2 + +[Term] +id: FPLX:000110 +name: COL4 +synonym: "Col4" EXACT [] +synonym: "ColIV" EXACT [] +synonym: "collagen IV" EXACT [] +synonym: "Collagen Type IV" EXACT [] +synonym: "collagen type IV" EXACT [] +xref: BEL:"COL4 Family" +xref: GO:0005587 +xref: IP:IPR001442 +xref: NCIT:C16448 +xref: RE:R-HSA-2127389 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:2202 ! COL4A1 +relationship: inverse_is_a HGNC:2203 ! COL4A2 +relationship: inverse_is_a HGNC:2204 ! COL4A3 +relationship: inverse_is_a HGNC:2206 ! COL4A4 +relationship: inverse_is_a HGNC:2207 ! COL4A5 +relationship: inverse_is_a HGNC:2208 ! COL4A6 + +[Term] +id: FPLX:000111 +name: COL5 +synonym: "collagen type V" EXACT [] +synonym: "type V collagen" EXACT [] +synonym: "type-V collagen" EXACT [] +xref: BEL:"COL5 Family" +xref: GO:0005588 +xref: RE:R-HSA-2127310 +xref: RE:R-HSA-2127422 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:2209 ! COL5A1 +relationship: inverse_is_a HGNC:2210 ! COL5A2 +relationship: inverse_is_a HGNC:14864 ! COL5A3 + +[Term] +id: FPLX:000112 +name: COLGALT +synonym: "COLGALT" EXACT [] +synonym: "Collagen beta(1-O)galactosyltransferase" EXACT [] +synonym: "Collagen beta(1-O)galactosyltransferases" EXACT [] +synonym: "collagen beta(1-O)galactosyltransferase" EXACT [] +synonym: "collagen beta(1-O)galactosyltransferases" EXACT [] +is_a: FPLX:000198 ! Glycosyltransferase +relationship: inverse_is_a HGNC:26182 ! COLGALT1 +relationship: inverse_is_a HGNC:16790 ! COLGALT2 + +[Term] +id: FPLX:000113 +name: COX +synonym: "Complex IV" EXACT [] +synonym: "cytochrome c oxidase" EXACT [] +xref: BEL:"Cytochrome C Oxidase Complex Muscle" +xref: BEL:"Cytochrome C Oxidase Complex Non Muscle" +xref: ECCODE:1.9.3.1 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:2267 ! COX5A +relationship: has_part HGNC:2269 ! COX5B +relationship: has_part FPLX:000114 ! COX4 +relationship: has_part FPLX:000115 ! COX6A +relationship: has_part FPLX:000116 ! COX6B +relationship: has_part FPLX:000117 ! COX7A +relationship: has_part FPLX:000118 ! COX7B +relationship: has_part FPLX:000119 ! COX8 +relationship: has_part HGNC:2260 ! COX10 +relationship: has_part HGNC:2261 ! COX11 +relationship: has_part HGNC:2263 ! COX15 +relationship: has_part HGNC:2264 ! COX17 + +[Term] +id: FPLX:000114 +name: COX4 +synonym: "Cox4" EXACT [] +xref: BEL:"COX4 Family" +xref: IP:IPR004203 +xref: IP:IPR013288 +xref: XFAM:PF02936 +relationship: part_of FPLX:000113 ! COX +relationship: inverse_is_a HGNC:2265 ! COX4I1 +relationship: inverse_is_a HGNC:16232 ! COX4I2 + +[Term] +id: FPLX:000115 +name: COX6A +synonym: "COX6A" EXACT [] +synonym: "Cox6a" EXACT [] +synonym: "Cytochrome c oxidase subunit 6a" EXACT [] +xref: BEL:"COX6A Family" +xref: IP:IPR001349 +xref: IP:IPR018507 +xref: XFAM:PF02046 +relationship: part_of FPLX:000113 ! COX +relationship: inverse_is_a HGNC:2277 ! COX6A1 +relationship: inverse_is_a HGNC:2279 ! COX6A2 + +[Term] +id: FPLX:000116 +name: COX6B +synonym: "Cox6b" EXACT [] +xref: BEL:"COX6B Family" +xref: XFAM:PF02297 +relationship: part_of FPLX:000113 ! COX +relationship: inverse_is_a HGNC:2280 ! COX6B1 +relationship: inverse_is_a HGNC:24380 ! COX6B2 + +[Term] +id: FPLX:000117 +name: COX7A +synonym: "COX7A" EXACT [] +synonym: "Cox7a" EXACT [] +xref: BEL:"COX7A Family" +xref: XFAM:PF02238 +relationship: part_of FPLX:000113 ! COX +relationship: inverse_is_a HGNC:2287 ! COX7A1 +relationship: inverse_is_a HGNC:2288 ! COX7A2 + +[Term] +id: FPLX:000118 +name: COX7B +synonym: "Cox7b" EXACT [] +xref: BEL:"COX7B Family" +xref: IP:IPR008433 +xref: IP:IPR023272 +xref: XFAM:PF05392 +relationship: part_of FPLX:000113 ! COX +relationship: inverse_is_a HGNC:2291 ! COX7B +relationship: inverse_is_a HGNC:24381 ! COX7B2 + +[Term] +id: FPLX:000119 +name: COX8 +synonym: "Cox8" EXACT [] +synonym: "cytochrome c oxidase subunit VIII" EXACT [] +xref: BEL:"COX8 Family" +xref: IP:IPR003205 +xref: XFAM:PF02285 +relationship: part_of FPLX:000113 ! COX +relationship: inverse_is_a HGNC:2294 ! COX8A +relationship: inverse_is_a HGNC:24382 ! COX8C + +[Term] +id: FPLX:000120 +name: CREB +synonym: "CREB family" EXACT [] +synonym: "CREB" EXACT [] +xref: BEL:"CREB Family" +xref: MEDSCAN:urn:agi-aopfc:0000094 +xref: NCIT:C17286 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:2345 ! CREB1 +relationship: inverse_is_a HGNC:2347 ! CREB3 +relationship: inverse_is_a HGNC:16844 ! CREB5 +relationship: inverse_is_a HGNC:18856 ! CREB3L1 +relationship: inverse_is_a HGNC:23720 ! CREB3L2 +relationship: inverse_is_a HGNC:18855 ! CREB3L3 +relationship: inverse_is_a HGNC:18854 ! CREB3L4 +relationship: inverse_is_a HGNC:2352 ! CREM +relationship: inverse_is_a HGNC:783 ! ATF1 +relationship: inverse_is_a HGNC:784 ! ATF2 + +[Term] +id: FPLX:000121 +name: CRISP +synonym: "CRISP" EXACT [] +synonym: "CRISPs" EXACT [] +synonym: "cysteine rich secretory proteins" EXACT [] +synonym: "cysteine-rich secretory proteins" EXACT [] +xref: BEL:"CRISP Family" +xref: IP:IPR013871 +xref: IP:IPR034117 +xref: XFAM:PF08562 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:304 ! CRISP1 +relationship: inverse_is_a HGNC:12024 ! CRISP2 +relationship: inverse_is_a HGNC:16904 ! CRISP3 + +[Term] +id: FPLX:000122 +name: CRSP +synonym: "CRSP complex" EXACT [] +synonym: "CRSP" EXACT [] +synonym: "CRSP/Med complex" EXACT [] +synonym: "transcriptional cofactor complex CRSP" EXACT [] +xref: BEL:"CRSP Complex" +xref: NCIT:C28687 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:9234 ! MED1 +relationship: has_part HGNC:2370 ! MED14 +relationship: has_part HGNC:2375 ! MED17 +relationship: has_part HGNC:2372 ! MED23 +relationship: has_part HGNC:2376 ! MED26 +relationship: has_part HGNC:2377 ! MED27 +relationship: has_part HGNC:2378 ! MED7 + +[Term] +id: FPLX:000123 +name: CRTC +synonym: "CRTC" EXACT [] +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:16062 ! CRTC1 +relationship: inverse_is_a HGNC:27301 ! CRTC2 +relationship: inverse_is_a HGNC:26148 ! CRTC3 + +[Term] +id: FPLX:000124 +name: CSNK1 +synonym: "Casein kinase 1" EXACT [] +synonym: "casein kinase 1" EXACT [] +synonym: "casein kinase I" EXACT [] +synonym: "CSNK1" EXACT [] +xref: BEL:"CSNK1 Family" +xref: MEDSCAN:urn:agi-protfc:casein%20kinase%20I +xref: NEXTPROT-FAMILY:03083 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:2451 ! CSNK1A1 +relationship: inverse_is_a HGNC:20289 ! CSNK1A1L +relationship: inverse_is_a HGNC:2452 ! CSNK1D +relationship: inverse_is_a HGNC:2453 ! CSNK1E +relationship: inverse_is_a HGNC:2454 ! CSNK1G1 +relationship: inverse_is_a HGNC:2455 ! CSNK1G2 +relationship: inverse_is_a HGNC:2456 ! CSNK1G3 + +[Term] +id: FPLX:000125 +name: CSNK2 +synonym: "CSNK2" EXACT [] +xref: BEL:"CSNK2 Family" +xref: RE:R-HSA-5083623 +xref: RE:R-HSA-5083624 +xref: RE:R-HSA-6805064 +xref: RE:R-HSA-6805073 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:2457 ! CSNK2A1 +relationship: inverse_is_a HGNC:2459 ! CSNK2A2 + +[Term] +id: FPLX:000126 +name: CTNNA +synonym: "a-cathenin" EXACT [] +synonym: "alpha catenin" EXACT [] +synonym: "alpha-catenin" EXACT [] +synonym: "catenin alpha" EXACT [] +synonym: "catenin α" EXACT [] +synonym: "α catenin" EXACT [] +synonym: "α-catenin" EXACT [] +xref: BEL:"CTNNA Family" +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:2509 ! CTNNA1 +relationship: inverse_is_a HGNC:2510 ! CTNNA2 +relationship: inverse_is_a HGNC:2511 ! CTNNA3 + +[Term] +id: FPLX:000127 +name: CUL +synonym: "cullin proteins" EXACT [] +synonym: "cullin" EXACT [] +synonym: "cullins" EXACT [] +xref: BEL:"CUL Family" +xref: MEDSCAN:urn:agi-complex:prophash-c3bac0781a4430da4cf6721b8f7537d9 +xref: MEDSCAN:urn:agi-protfc:cullin +xref: NEXTPROT-FAMILY:00787 +xref: XFAM:PF00888 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:2551 ! CUL1 +relationship: inverse_is_a HGNC:2552 ! CUL2 +relationship: inverse_is_a HGNC:2553 ! CUL3 +relationship: inverse_is_a HGNC:2554 ! CUL4A +relationship: inverse_is_a HGNC:2555 ! CUL4B +relationship: inverse_is_a HGNC:2556 ! CUL5 +relationship: inverse_is_a HGNC:21024 ! CUL7 + +[Term] +id: FPLX:000128 +name: CXCL-ELR-negative +synonym: "ELR (-) CXC chemokines" EXACT [] +synonym: "ELR-negative CXC chemokine" EXACT [] +synonym: "ELR-negative CXC family" EXACT [] +synonym: "non-ELR-CXC chemokines" EXACT [] +xref: BEL:"CXCL ELR-Negative Family" +is_a: FPLX:000099 ! Chemokine +relationship: inverse_is_a HGNC:10637 ! CXCL10 +relationship: inverse_is_a HGNC:10638 ! CXCL11 +relationship: inverse_is_a HGNC:10672 ! CXCL12 +relationship: inverse_is_a HGNC:10639 ! CXCL13 +relationship: inverse_is_a HGNC:10640 ! CXCL14 +relationship: inverse_is_a HGNC:7098 ! CXCL9 +relationship: inverse_is_a HGNC:8861 ! PF4 + +[Term] +id: FPLX:000129 +name: CXCL-ELR-positive +synonym: "ELR (+) CXC chemokines" EXACT [] +synonym: "ELR-positive CXC chemokine" EXACT [] +synonym: "ELR-positive CXC family" EXACT [] +xref: BEL:"CXCL ELR-Positive Family" +is_a: FPLX:000099 ! Chemokine +relationship: inverse_is_a HGNC:4602 ! CXCL1 +relationship: inverse_is_a HGNC:4603 ! CXCL2 +relationship: inverse_is_a HGNC:4604 ! CXCL3 +relationship: inverse_is_a HGNC:10642 ! CXCL5 +relationship: inverse_is_a HGNC:10643 ! CXCL6 +relationship: inverse_is_a HGNC:6025 ! CXCL8 +relationship: inverse_is_a HGNC:9240 ! PPBP + +[Term] +id: FPLX:000130 +name: Cyclin +synonym: "cyclin family" EXACT [] +synonym: "Cyclin" EXACT [] +synonym: "cyclin" EXACT [] +synonym: "cyclins" EXACT [] +xref: MEDSCAN:urn:agi-protfc:cyclin +xref: NCIT:C17349 +xref: NEXTPROT-FAMILY:00815 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:1579 ! CCNB1 +relationship: inverse_is_a HGNC:1580 ! CCNB2 +relationship: inverse_is_a HGNC:18709 ! CCNB3 +relationship: inverse_is_a HGNC:1581 ! CCNC +relationship: inverse_is_a HGNC:1591 ! CCNF +relationship: inverse_is_a HGNC:1592 ! CCNG1 +relationship: inverse_is_a HGNC:1593 ! CCNG2 +relationship: inverse_is_a HGNC:1594 ! CCNH +relationship: inverse_is_a HGNC:1595 ! CCNI +relationship: inverse_is_a HGNC:33869 ! CCNI2 +relationship: inverse_is_a HGNC:23434 ! CCNJ +relationship: inverse_is_a HGNC:25876 ! CCNJL +relationship: inverse_is_a HGNC:1596 ! CCNK +relationship: inverse_is_a HGNC:20569 ! CCNL1 +relationship: inverse_is_a HGNC:20570 ! CCNL2 +relationship: inverse_is_a HGNC:18576 ! CCNO +relationship: inverse_is_a HGNC:1599 ! CCNT1 +relationship: inverse_is_a HGNC:1600 ! CCNT2 +relationship: inverse_is_a HGNC:23354 ! CCNY +relationship: inverse_is_a HGNC:26868 ! CCNYL1 +relationship: inverse_is_a HGNC:33206 ! CCNYL3 +relationship: inverse_is_a FPLX:000131 ! Cyclin_A +relationship: inverse_is_a FPLX:000132 ! Cyclin_D +relationship: inverse_is_a FPLX:000133 ! Cyclin_E + +[Term] +id: FPLX:000131 +name: Cyclin-A +synonym: "Cyclin A" EXACT [] +synonym: "cyclin A" EXACT [] +synonym: "Cyclin-A" EXACT [] +xref: BEL:"CCNA Family" +xref: RE:R-HSA-170089 +xref: RE:R-HSA-174074 +xref: RE:R-HSA-5696998 +xref: RE:R-HSA-6783051 +xref: RE:R-HSA-75202 +is_a: FPLX:000130 ! Cyclin +relationship: inverse_is_a HGNC:1577 ! CCNA1 +relationship: inverse_is_a HGNC:1578 ! CCNA2 + +[Term] +id: FPLX:000132 +name: Cyclin-D +synonym: "Cyclin D" EXACT [] +xref: BEL:"CCND Family" +xref: IP:IPR015451 +xref: NCIT:C104194 +xref: NEXTPROT-FAMILY:00818 +xref: RE:R-HSA-182582 +xref: RE:R-HSA-182700 +xref: RE:R-HSA-8938866 +is_a: FPLX:000130 ! Cyclin +relationship: inverse_is_a HGNC:1582 ! CCND1 +relationship: inverse_is_a HGNC:1583 ! CCND2 +relationship: inverse_is_a HGNC:1585 ! CCND3 + +[Term] +id: FPLX:000133 +name: Cyclin-E +synonym: "cyclin E" EXACT [] +xref: BEL:"CCNE Family" +xref: IP:IPR028858 +xref: NCIT:C104197 +xref: NEXTPROT-FAMILY:00819 +xref: RE:R-HSA-157462 +xref: RE:R-HSA-187493 +xref: RE:R-HSA-6813837 +xref: RE:R-HSA-68373 +is_a: FPLX:000130 ! Cyclin +relationship: inverse_is_a HGNC:1589 ! CCNE1 +relationship: inverse_is_a HGNC:1590 ! CCNE2 + +[Term] +id: FPLX:000134 +name: Cyclophilin +synonym: "cyclophilin" EXACT [] +synonym: "cyclophilins" EXACT [] +xref: BEL:"Cyclophilin Family" +xref: MEDSCAN:urn:agi-protfc:cyclophilins +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:10664 ! CWC27 +relationship: inverse_is_a HGNC:9253 ! PPIA +relationship: inverse_is_a HGNC:9255 ! PPIB +relationship: inverse_is_a HGNC:9256 ! PPIC +relationship: inverse_is_a HGNC:9257 ! PPID +relationship: inverse_is_a HGNC:9258 ! PPIE +relationship: inverse_is_a HGNC:9259 ! PPIF +relationship: inverse_is_a HGNC:14651 ! PPIH +relationship: inverse_is_a HGNC:9260 ! PPIL1 +relationship: inverse_is_a HGNC:9261 ! PPIL2 +relationship: inverse_is_a HGNC:9262 ! PPIL3 +relationship: inverse_is_a HGNC:15702 ! PPIL4 +relationship: inverse_is_a HGNC:21557 ! PPIL6 +relationship: inverse_is_a HGNC:28954 ! PPWD1 +relationship: inverse_is_a HGNC:24369 ! PPIAL4A +relationship: inverse_is_a HGNC:33995 ! PPIAL4C +relationship: inverse_is_a HGNC:33996 ! PPIAL4G + +[Term] +id: FPLX:000135 +name: Cytoplasmic-dynein +synonym: "cytoplasmic dynein" EXACT [] +xref: BEL:"Cytoplasmic Dynein Complex" +xref: GO:0005868 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:2961 ! DYNC1H1 +relationship: has_part HGNC:2963 ! DYNC1I1 +relationship: has_part HGNC:2964 ! DYNC1I2 +relationship: has_part HGNC:18745 ! DYNC1LI1 +relationship: has_part HGNC:2966 ! DYNC1LI2 +relationship: has_part HGNC:15476 ! DYNLL1 +relationship: has_part HGNC:15468 ! DYNLRB1 +relationship: has_part HGNC:15467 ! DYNLRB2 + +[Term] +id: FPLX:000136 +name: DDR +synonym: "discoidin domain receptor family" EXACT [] +synonym: "discoidin domain receptors" EXACT [] +synonym: "discoidin domain-containing receptor" EXACT [] +xref: BEL:"DDR Family" +xref: MEDSCAN:urn:agi-aopfc:0000252 +xref: XFAM:PF08841 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:2730 ! DDR1 +relationship: inverse_is_a HGNC:2731 ! DDR2 + +[Term] +id: FPLX:000137 +name: Death-receptor +synonym: "death receptor" EXACT [] +synonym: "death receptors" EXACT [] +xref: GO:0005035 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:11916 ! TNFRSF1A +relationship: inverse_is_a HGNC:11917 ! TNFRSF1B +relationship: inverse_is_a HGNC:11904 ! TNFRSF10A +relationship: inverse_is_a HGNC:11905 ! TNFRSF10B +relationship: inverse_is_a HGNC:11906 ! TNFRSF10C +relationship: inverse_is_a HGNC:11907 ! TNFRSF10D +relationship: inverse_is_a HGNC:11920 ! FAS + +[Term] +id: FPLX:000138 +name: Desmoglein +synonym: "desmoglein" EXACT [] +synonym: "desmogleins" EXACT [] +xref: BEL:"Desmoglein Family" +xref: IP:IPR009123 +xref: MEDSCAN:urn:agi-protfc:desmoglein +xref: RE:R-HSA-6814694 +xref: RE:R-HSA-8847714 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:3048 ! DSG1 +relationship: inverse_is_a HGNC:3049 ! DSG2 +relationship: inverse_is_a HGNC:3050 ! DSG3 +relationship: inverse_is_a HGNC:21307 ! DSG4 + +[Term] +id: FPLX:000139 +name: DGC +synonym: "DGC" EXACT [] +synonym: "dystrophin glycoprotein complex" EXACT [] +synonym: "dystrophin glycoprotein" EXACT [] +synonym: "dystrophin-associated glycoprotein complex" EXACT [] +synonym: "dystrophin-glycoprotein complex" EXACT [] +xref: BEL:"Dystrophin Associated Glycoprotein Complex" +xref: GO:0016010 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:2666 ! DAG1 +relationship: has_part HGNC:2928 ! DMD +relationship: has_part HGNC:3057 ! DTNA +relationship: has_part HGNC:3058 ! DTNB +relationship: has_part HGNC:7872 ! NOS1 +relationship: has_part HGNC:10805 ! SGCA +relationship: has_part HGNC:10806 ! SGCB +relationship: has_part HGNC:10807 ! SGCD +relationship: has_part HGNC:10808 ! SGCE +relationship: has_part HGNC:14075 ! SGCZ +relationship: has_part HGNC:11167 ! SNTA1 +relationship: has_part HGNC:11168 ! SNTB1 +relationship: has_part HGNC:13740 ! SNTG1 +relationship: has_part HGNC:13741 ! SNTG2 +relationship: has_part HGNC:11322 ! SSPN +relationship: has_part HGNC:12635 ! UTRN + +[Term] +id: FPLX:000140 +name: DGK +synonym: "DAG kinase" EXACT [] +synonym: "DGK" EXACT [] +synonym: "diacyl glycerol kinase" EXACT [] +synonym: "diacylglycerol kinase" EXACT [] +xref: BEL:"DGK Family" +xref: ECCODE:2.7.1.107 +xref: IP:IPR000756 +xref: RE:R-HSA-426070 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:2849 ! DGKA +relationship: inverse_is_a HGNC:2850 ! DGKB +relationship: inverse_is_a HGNC:2851 ! DGKD +relationship: inverse_is_a HGNC:2853 ! DGKG +relationship: inverse_is_a HGNC:2854 ! DGKH +relationship: inverse_is_a HGNC:2856 ! DGKQ +relationship: inverse_is_a HGNC:2857 ! DGKZ +relationship: inverse_is_a HGNC:2852 ! DGKE +relationship: inverse_is_a HGNC:2855 ! DGKI +relationship: inverse_is_a HGNC:32395 ! DGKK + +[Term] +id: FPLX:000141 +name: DNA-polymerase-delta +synonym: "DNA polymerase delta" EXACT [] +synonym: "DNA polymerase δ" EXACT [] +synonym: "Pol delta" EXACT [] +synonym: "pol delta" EXACT [] +synonym: "Pol δ" EXACT [] +synonym: "pol δ" EXACT [] +xref: BEL:"DNA Polymerase delta Complex" +xref: GO:0043625 +xref: NCIT:C16511 +xref: RE:R-HSA-68450 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:9175 ! POLD1 +relationship: has_part HGNC:9176 ! POLD2 +relationship: has_part HGNC:20932 ! POLD3 +relationship: has_part HGNC:14106 ! POLD4 + +[Term] +id: FPLX:000142 +name: DNM +synonym: "dynamin family" EXACT [] +synonym: "dynamin" EXACT [] +xref: BEL:"DNM Family" +xref: RE:R-HSA-2213185 +xref: RE:R-HSA-446847 +xref: RE:R-HSA-8868235 +xref: RE:R-HSA-8868609 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:2972 ! DNM1 +relationship: inverse_is_a HGNC:2974 ! DNM2 +relationship: inverse_is_a HGNC:29125 ! DNM3 + +[Term] +id: FPLX:000143 +name: DRD +synonym: "dopamine receptor" EXACT [] +synonym: "dopamine receptors" EXACT [] +xref: BEL:"DRD Family" +xref: GO:0004952 +xref: IP:IPR000929 +xref: NCIT:C17066 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:3020 ! DRD1 +relationship: inverse_is_a HGNC:3023 ! DRD2 +relationship: inverse_is_a HGNC:3024 ! DRD3 +relationship: inverse_is_a HGNC:3025 ! DRD4 +relationship: inverse_is_a HGNC:3026 ! DRD5 + +[Term] +id: FPLX:000144 +name: DUSP +synonym: "DUSP" EXACT [] +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:3064 ! DUSP1 +relationship: inverse_is_a HGNC:3068 ! DUSP2 +relationship: inverse_is_a HGNC:3069 ! DUSP3 +relationship: inverse_is_a HGNC:3070 ! DUSP4 +relationship: inverse_is_a HGNC:3071 ! DUSP5 +relationship: inverse_is_a HGNC:3072 ! DUSP6 + +[Term] +id: FPLX:000145 +name: DVL +synonym: "dishevelled" EXACT [] +synonym: "Dvl" EXACT [] +xref: BEL:"DVL Family" +xref: XFAM:PF02377 +xref: XFAM:PF08137 +xref: RE:R-HSA-1504201 +xref: RE:R-HSA-201689 +xref: RE:R-HSA-201725 +xref: RE:R-HSA-3772407 +xref: RE:R-HSA-3858467 +xref: RE:R-HSA-3858479 +xref: RE:R-HSA-4652685 +xref: SIGNOR:SIGNOR-PF10 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:3084 ! DVL1 +relationship: inverse_is_a HGNC:3086 ! DVL2 +relationship: inverse_is_a HGNC:3087 ! DVL3 + +[Term] +id: FPLX:000146 +name: DYRK +synonym: "DYRK" EXACT [] +xref: NEXTPROT-FAMILY:03091 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:3091 ! DYRK1A +relationship: inverse_is_a HGNC:3092 ! DYRK1B +relationship: inverse_is_a HGNC:3093 ! DYRK2 +relationship: inverse_is_a HGNC:3094 ! DYRK3 +relationship: inverse_is_a HGNC:3095 ! DYRK4 + +[Term] +id: FPLX:000147 +name: E2F +synonym: "E2F" EXACT [] +xref: BEL:"E2F Family" +xref: IP:IPR015633 +xref: MEDSCAN:urn:agi-aopfc:0000099 +xref: MEDSCAN:urn:agi-complex:prophash-40bc2e4348830d6f7bdacd573fd7c388 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:3113 ! E2F1 +relationship: inverse_is_a HGNC:3114 ! E2F2 +relationship: inverse_is_a HGNC:3115 ! E2F3 +relationship: inverse_is_a HGNC:3118 ! E2F4 +relationship: inverse_is_a HGNC:3119 ! E2F5 +relationship: inverse_is_a HGNC:3120 ! E2F6 +relationship: inverse_is_a HGNC:23820 ! E2F7 +relationship: inverse_is_a HGNC:24727 ! E2F8 + +[Term] +id: FPLX:000148 +name: E3-Ub-ligase +synonym: "E3 ubiquitin ligase" EXACT [] +synonym: "E3" EXACT [] +xref: XFAM:PF12483 +xref: RE:R-HSA-976075 +is_a: FPLX:000000 ! famplex + +[Term] +id: FPLX:000149 +name: EDN +synonym: "endothelin" EXACT [] +synonym: "endothelins" EXACT [] +xref: BEL:"EDN Family" +xref: IP:IPR001928 +xref: IP:IPR019764 +xref: IP:IPR020475 +xref: MEDSCAN:urn:agi-protfc:endothelin +xref: XFAM:PF00322 +xref: RE:R-HSA-388544 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:3176 ! EDN1 +relationship: inverse_is_a HGNC:3177 ! EDN2 +relationship: inverse_is_a HGNC:3178 ! EDN3 + +[Term] +id: FPLX:000150 +name: EGFR-ligand +synonym: "EGFR ligand" EXACT [] +synonym: "EGFR ligands" EXACT [] +xref: BEL:"EGFR Ligand Family" +xref: GO:0005154 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:651 ! AREG +relationship: inverse_is_a HGNC:3229 ! EGF +relationship: inverse_is_a HGNC:11765 ! TGFA +relationship: inverse_is_a HGNC:3059 ! HBEGF +relationship: inverse_is_a HGNC:1121 ! BTC +relationship: inverse_is_a HGNC:3443 ! EREG +relationship: inverse_is_a HGNC:17470 ! EPGN + +[Term] +id: FPLX:000151 +name: EGR +synonym: "early growth response proteins" EXACT [] +synonym: "EGR" EXACT [] +xref: BEL:"EGR Family" +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:3238 ! EGR1 +relationship: inverse_is_a HGNC:3239 ! EGR2 +relationship: inverse_is_a HGNC:3240 ! EGR3 +relationship: inverse_is_a HGNC:3241 ! EGR4 + +[Term] +id: FPLX:000152 +name: EIF2B +synonym: "EIF2B" EXACT [] +synonym: "eIF2B" EXACT [] +xref: BEL:"EIF2B Complex" +xref: NCIT:C18162 +xref: RE:R-HSA-72526 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:3257 ! EIF2B1 +relationship: has_part HGNC:3258 ! EIF2B2 +relationship: has_part HGNC:3259 ! EIF2B3 +relationship: has_part HGNC:3260 ! EIF2B4 +relationship: has_part HGNC:3261 ! EIF2B5 + +[Term] +id: FPLX:000153 +name: EIF4A +synonym: "eIF4A" EXACT [] +synonym: "eukaryotic initiation factor-4A" EXACT [] +xref: BEL:"EIF4A Family" +xref: NEXTPROT-FAMILY:00921 +xref: RE:R-HSA-429842 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:3282 ! EIF4A1 +relationship: inverse_is_a HGNC:3284 ! EIF4A2 +relationship: inverse_is_a HGNC:18683 ! EIF4A3 + +[Term] +id: FPLX:000154 +name: EIF4EBP +synonym: "4EBP" EXACT [] +synonym: "initiation factor 4E binding proteins" EXACT [] +xref: BEL:"EIF4EBP Family" +xref: GO:0008190 +xref: IP:IPR008606 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:3288 ! EIF4EBP1 +relationship: inverse_is_a HGNC:3289 ! EIF4EBP2 +relationship: inverse_is_a HGNC:3290 ! EIF4EBP3 + +[Term] +id: FPLX:000155 +name: EIF4G +synonym: "eIF4G" EXACT [] +xref: XFAM:PF02854 +xref: RE:R-HSA-1678828 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:3296 ! EIF4G1 +relationship: inverse_is_a HGNC:3297 ! EIF4G2 +relationship: inverse_is_a HGNC:3298 ! EIF4G3 + +[Term] +id: FPLX:000156 +name: ELA +synonym: "elastase" EXACT [] +xref: BEL:"ELA Family" +xref: NEXTPROT-FAMILY:02762 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:913 ! AZU1 +relationship: inverse_is_a HGNC:3308 ! CELA1 +relationship: inverse_is_a HGNC:24609 ! CELA2A +relationship: inverse_is_a HGNC:29995 ! CELA2B +relationship: inverse_is_a HGNC:15944 ! CELA3A +relationship: inverse_is_a HGNC:15945 ! CELA3B +relationship: inverse_is_a HGNC:2523 ! CTRC +relationship: inverse_is_a HGNC:3309 ! ELANE +relationship: inverse_is_a HGNC:9495 ! PRTN3 + +[Term] +id: FPLX:000157 +name: ENO +synonym: "enolase" EXACT [] +xref: BEL:"ENO Family" +xref: IP:IPR000941 +xref: IP:IPR020810 +xref: IP:IPR020811 +xref: NEXTPROT-FAMILY:01112 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:3350 ! ENO1 +relationship: inverse_is_a HGNC:3353 ! ENO2 +relationship: inverse_is_a HGNC:3354 ! ENO3 +relationship: inverse_is_a HGNC:31670 ! ENO4 + +[Term] +id: FPLX:000158 +name: Ephrin-receptor +synonym: "Eph receptor" EXACT [] +synonym: "Eph receptors" EXACT [] +synonym: "ephrin receptor" EXACT [] +xref: BEL:"Ephrin Receptor Family" +xref: IP:IPR001090 +xref: IP:IPR001426 +xref: IP:IPR016257 +xref: IP:IPR027936 +xref: NCIT:C18606 +xref: NEXTPROT-FAMILY:03124 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:3385 ! EPHA1 +relationship: inverse_is_a HGNC:3386 ! EPHA2 +relationship: inverse_is_a HGNC:3387 ! EPHA3 +relationship: inverse_is_a HGNC:3388 ! EPHA4 +relationship: inverse_is_a HGNC:3389 ! EPHA5 +relationship: inverse_is_a HGNC:19296 ! EPHA6 +relationship: inverse_is_a HGNC:3390 ! EPHA7 +relationship: inverse_is_a HGNC:3391 ! EPHA8 +relationship: inverse_is_a HGNC:3392 ! EPHB1 +relationship: inverse_is_a HGNC:3393 ! EPHB2 +relationship: inverse_is_a HGNC:3394 ! EPHB3 +relationship: inverse_is_a HGNC:3395 ! EPHB4 +relationship: inverse_is_a HGNC:3396 ! EPHB6 +relationship: inverse_is_a HGNC:19987 ! EPHA10 + +[Term] +id: FPLX:000159 +name: EPN +synonym: "epsin" EXACT [] +synonym: "epsins" EXACT [] +xref: BEL:"EPN Family" +xref: NEXTPROT-FAMILY:01121 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:21604 ! EPN1 +relationship: inverse_is_a HGNC:18639 ! EPN2 +relationship: inverse_is_a HGNC:18235 ! EPN3 +relationship: inverse_is_a HGNC:23186 ! CLINT1 + +[Term] +id: FPLX:000160 +name: ERBB +synonym: "ErbB" EXACT [] +synonym: "erbB" EXACT [] +xref: BEL:"EGFR/ERBB Family" +xref: IP:IPR016245 +xref: NCIT:C17763 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:3236 ! EGFR +relationship: inverse_is_a HGNC:3430 ! ERBB2 +relationship: inverse_is_a HGNC:3431 ! ERBB3 +relationship: inverse_is_a HGNC:3432 ! ERBB4 + +[Term] +id: FPLX:000161 +name: ERK +synonym: "ERK 1/2" EXACT [] +synonym: "ERK MAPK" EXACT [] +synonym: "ERK mitogen-activated protein kinase" EXACT [] +synonym: "ERK" EXACT [] +synonym: "Erk" EXACT [] +synonym: "ERK-1/2" EXACT [] +synonym: "ERK1/2 MAPK" EXACT [] +synonym: "ERK1/2" EXACT [] +synonym: "Erk1/2" EXACT [] +synonym: "ERKs" EXACT [] +synonym: "Extracellular Signal Regulated Kinase" EXACT [] +synonym: "extracellular signal-regulated kinase" EXACT [] +synonym: "MAPK" EXACT [] +synonym: "phospho-ERK1/2" EXACT [] +xref: BEL:"MAPK Erk1/2 Family" +xref: BEL:"MAPK Erk1/3 Family" +xref: IP:IPR008349 +xref: MEDSCAN:urn:agi-aopfc:0000458 +xref: NCIT:C16376 +xref: NCIT:C26360 +xref: RE:R-HSA-1268261 +xref: RE:R-HSA-169289 +xref: RE:R-HSA-169291 +xref: RE:R-HSA-198701 +xref: RE:R-HSA-2422450 +xref: RE:R-HSA-3656389 +xref: RE:R-HSA-5674338 +xref: RE:R-HSA-5674340 +xref: RE:R-HSA-5674341 +xref: RE:R-HSA-5675361 +xref: RE:R-HSA-5675363 +xref: SIGNOR:SIGNOR-PF1 +is_a: FPLX:000283 ! MAPK +relationship: inverse_is_a HGNC:6871 ! MAPK1 +relationship: inverse_is_a HGNC:6877 ! MAPK3 + +[Term] +id: FPLX:000162 +name: ESR +synonym: "ER" EXACT [] +synonym: "ESR" EXACT [] +xref: BEL:"ESR Family" +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:3467 ! ESR1 +relationship: inverse_is_a HGNC:3468 ! ESR2 + +[Term] +id: FPLX:000163 +name: ETS +synonym: "ETS" EXACT [] +xref: BEL:"ETS Family" +xref: IP:IPR016311 +xref: XFAM:PF00178 +xref: RE:R-HSA-3132719 +xref: RE:R-HSA-3132724 +xref: RE:R-HSA-3200029 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:3488 ! ETS1 +relationship: inverse_is_a HGNC:3489 ! ETS2 + +[Term] +id: FPLX:000164 +name: EXOC +synonym: "EXOC" EXACT [] +synonym: "exocyst complex" EXACT [] +synonym: "exocyst" EXACT [] +xref: GO:0000145 +xref: RE:R-HSA-264974 +xref: RE:R-HSA-5623453 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:30380 ! EXOC1 +relationship: has_part HGNC:24968 ! EXOC2 +relationship: has_part HGNC:30378 ! EXOC3 +relationship: has_part HGNC:30389 ! EXOC4 +relationship: has_part HGNC:10696 ! EXOC5 +relationship: has_part HGNC:23196 ! EXOC6 +relationship: has_part HGNC:23214 ! EXOC7 +relationship: has_part HGNC:24659 ! EXOC8 + +[Term] +id: FPLX:000165 +name: EXT +synonym: "Exostosin glycosyltransferase family" EXACT [] +synonym: "exostosin glycosyltransferase family" EXACT [] +synonym: "EXT" EXACT [] +is_a: FPLX:000198 ! Glycosyltransferase +relationship: inverse_is_a HGNC:3515 ! EXTL1 +relationship: inverse_is_a HGNC:3516 ! EXTL2 +relationship: inverse_is_a HGNC:3518 ! EXTL3 +relationship: inverse_is_a HGNC:3512 ! EXT1 +relationship: inverse_is_a HGNC:3513 ! EXT2 + +[Term] +id: FPLX:000166 +name: FANC +synonym: "FANC proteins" EXACT [] +synonym: "FANC" EXACT [] +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:3582 ! FANCA +relationship: inverse_is_a HGNC:3583 ! FANCB +relationship: inverse_is_a HGNC:3584 ! FANCC +relationship: inverse_is_a HGNC:1101 ! BRCA2 +relationship: inverse_is_a HGNC:3585 ! FANCD2 +relationship: inverse_is_a HGNC:3586 ! FANCE +relationship: inverse_is_a HGNC:3587 ! FANCF +relationship: inverse_is_a HGNC:3588 ! FANCG +relationship: inverse_is_a HGNC:25568 ! FANCI +relationship: inverse_is_a HGNC:20473 ! BRIP1 +relationship: inverse_is_a HGNC:20748 ! FANCL +relationship: inverse_is_a HGNC:23168 ! FANCM +relationship: inverse_is_a HGNC:26144 ! PALB2 +relationship: inverse_is_a HGNC:9820 ! RAD51C +relationship: inverse_is_a HGNC:23845 ! SLX4 +relationship: inverse_is_a HGNC:3436 ! ERCC4 +relationship: inverse_is_a HGNC:9817 ! RAD51 +relationship: inverse_is_a HGNC:1100 ! BRCA1 +relationship: inverse_is_a HGNC:25009 ! UBE2T +relationship: inverse_is_a HGNC:12829 ! XRCC2 + +[Term] +id: FPLX:000167 +name: FGF +synonym: "FGF" EXACT [] +xref: BEL:"FGF Family" +xref: GO:0005162 +xref: IP:IPR002209 +xref: XFAM:PF00167 +xref: SIGNOR:SIGNOR-PF8 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:3665 ! FGF1 +relationship: inverse_is_a HGNC:3676 ! FGF2 +relationship: inverse_is_a HGNC:3681 ! FGF3 +relationship: inverse_is_a HGNC:3682 ! FGF4 +relationship: inverse_is_a HGNC:3683 ! FGF5 +relationship: inverse_is_a HGNC:3684 ! FGF6 +relationship: inverse_is_a HGNC:3685 ! FGF7 +relationship: inverse_is_a HGNC:3686 ! FGF8 +relationship: inverse_is_a HGNC:3687 ! FGF9 +relationship: inverse_is_a HGNC:3666 ! FGF10 +relationship: inverse_is_a HGNC:3667 ! FGF11 +relationship: inverse_is_a HGNC:3668 ! FGF12 +relationship: inverse_is_a HGNC:3670 ! FGF13 +relationship: inverse_is_a HGNC:3671 ! FGF14 +relationship: inverse_is_a HGNC:3672 ! FGF16 +relationship: inverse_is_a HGNC:3673 ! FGF17 +relationship: inverse_is_a HGNC:3674 ! FGF18 +relationship: inverse_is_a HGNC:3675 ! FGF19 +relationship: inverse_is_a HGNC:3677 ! FGF20 +relationship: inverse_is_a HGNC:3678 ! FGF21 +relationship: inverse_is_a HGNC:3679 ! FGF22 +relationship: inverse_is_a HGNC:3680 ! FGF23 + +[Term] +id: FPLX:000168 +name: FGFR +synonym: "FGFR" EXACT [] +xref: BEL:"FGFR Family" +xref: GO:0005007 +xref: IP:IPR016248 +xref: NCIT:C17297 +xref: SIGNOR:SIGNOR-PF23 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:3688 ! FGFR1 +relationship: inverse_is_a HGNC:3689 ! FGFR2 +relationship: inverse_is_a HGNC:3690 ! FGFR3 +relationship: inverse_is_a HGNC:3691 ! FGFR4 +relationship: inverse_is_a HGNC:3693 ! FGFRL1 + +[Term] +id: FPLX:000169 +name: Fibrinogen +synonym: "fibrinogen" EXACT [] +xref: BEL:"Fibrinogen Complex" +xref: GO:0005577 +xref: IP:IPR012290 +xref: RE:R-HSA-114617 +xref: RE:R-HSA-114618 +xref: RE:R-HSA-139933 +xref: RE:R-HSA-139934 +xref: RE:R-HSA-140586 +xref: RE:R-HSA-140919 +xref: RE:R-HSA-8870680 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:3661 ! FGA +relationship: has_part HGNC:3662 ! FGB +relationship: has_part HGNC:3694 ! FGG + +[Term] +id: FPLX:000170 +name: FLOT +synonym: "flotillin" EXACT [] +xref: BEL:"FLOT Family" +xref: IP:IPR027705 +xref: IP:IPR031905 +xref: MEDSCAN:urn:agi-protfc:flotillin +xref: XFAM:PF15975 +xref: RE:R-HSA-8849894 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:3757 ! FLOT1 +relationship: inverse_is_a HGNC:3758 ! FLOT2 + +[Term] +id: FPLX:000171 +name: FLRT +synonym: "FLRT family" EXACT [] +synonym: "Flrt family" EXACT [] +synonym: "FLRT proteins" EXACT [] +xref: BEL:"FLRT Family" +xref: RE:R-HSA-5656056 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:3760 ! FLRT1 +relationship: inverse_is_a HGNC:3761 ! FLRT2 +relationship: inverse_is_a HGNC:3762 ! FLRT3 + +[Term] +id: FPLX:000172 +name: FNT +synonym: "farnesyltransferase" EXACT [] +synonym: "FTase" EXACT [] +synonym: "protein farnesyltransferase" EXACT [] +xref: ECCODE:2.5.1.58 +xref: RE:R-HSA-2530496 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:3782 ! FNTA +relationship: has_part HGNC:3785 ! FNTB + +[Term] +id: FPLX:000173 +name: FOS-family +synonym: "FOS" EXACT [] +synonym: "Fos" EXACT [] +xref: NEXTPROT-FAMILY:00408 +relationship: part_of FPLX:000048 ! AP1 +relationship: inverse_is_a HGNC:3796 ! FOS +relationship: inverse_is_a HGNC:3797 ! FOSB +relationship: inverse_is_a HGNC:13718 ! FOSL1 +relationship: inverse_is_a HGNC:3798 ! FOSL2 + +[Term] +id: FPLX:000174 +name: FOXO +synonym: "FOXO" EXACT [] +synonym: "FoxO" EXACT [] +xref: BEL:"FOXO Family" +xref: IP:IPR032067 +xref: NCIT:C118892 +xref: SIGNOR:SIGNOR-PF27 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:3819 ! FOXO1 +relationship: inverse_is_a HGNC:3821 ! FOXO3 +relationship: inverse_is_a HGNC:7139 ! FOXO4 +relationship: inverse_is_a HGNC:24814 ! FOXO6 + +[Term] +id: FPLX:000175 +name: FSH +synonym: "follicle-stimulating hormone" EXACT [] +synonym: "FSH" EXACT [] +xref: BEL:"Follicle Stimulating Hormone Complex" +xref: GO:0016914 +xref: RE:R-HSA-378947 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:1885 ! CGA +relationship: has_part HGNC:3964 ! FSHB + +[Term] +id: FPLX:000176 +name: FUT +synonym: "Fucosyltransferase" EXACT [] +synonym: "Fucosyltransferases" EXACT [] +synonym: "fucosyltransferase" EXACT [] +synonym: "fucosyltransferases" EXACT [] +synonym: "FUT" EXACT [] +is_a: FPLX:000198 ! Glycosyltransferase +relationship: inverse_is_a HGNC:4012 ! FUT1 +relationship: inverse_is_a HGNC:4013 ! FUT2 +relationship: inverse_is_a HGNC:4014 ! FUT3 +relationship: inverse_is_a HGNC:4015 ! FUT4 +relationship: inverse_is_a HGNC:4016 ! FUT5 +relationship: inverse_is_a HGNC:4017 ! FUT6 +relationship: inverse_is_a HGNC:4018 ! FUT7 +relationship: inverse_is_a HGNC:4019 ! FUT8 +relationship: inverse_is_a HGNC:4020 ! FUT9 +relationship: inverse_is_a HGNC:19234 ! FUT10 +relationship: inverse_is_a HGNC:19233 ! FUT11 +relationship: inverse_is_a HGNC:14988 ! POFUT1 +relationship: inverse_is_a HGNC:14683 ! POFUT2 + +[Term] +id: FPLX:000177 +name: FZD +synonym: "Fz" EXACT [] +synonym: "FZD" EXACT [] +xref: BEL:"FZD Family" +xref: MEDSCAN:urn:agi-aopfc:0000197 +xref: MEDSCAN:urn:agi-complex:prophash-047b61fab6d7e7445346cc84dafcb267 +xref: XFAM:PF01534 +xref: RE:R-HSA-517388 +xref: SIGNOR:SIGNOR-PF11 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:4038 ! FZD1 +relationship: inverse_is_a HGNC:4039 ! FZD10 +relationship: inverse_is_a HGNC:4040 ! FZD2 +relationship: inverse_is_a HGNC:4041 ! FZD3 +relationship: inverse_is_a HGNC:4042 ! FZD4 +relationship: inverse_is_a HGNC:4043 ! FZD5 +relationship: inverse_is_a HGNC:4044 ! FZD6 +relationship: inverse_is_a HGNC:4045 ! FZD7 +relationship: inverse_is_a HGNC:4046 ! FZD8 +relationship: inverse_is_a HGNC:4047 ! FZD9 + +[Term] +id: FPLX:000178 +name: F-actin +synonym: "F-actin" EXACT [] +xref: GO:0031941 +xref: MEDSCAN:urn:agi-protfc:F-actin-binding%20protein +is_a: FPLX:000009 ! Actin + +[Term] +id: FPLX:000179 +name: GABR +synonym: "GABA receptor" EXACT [] +synonym: "GABA receptors" EXACT [] +synonym: "GABA-A receptor" EXACT [] +synonym: "gamma-aminobutyric-acid A receptor" EXACT [] +synonym: "γ-aminobutyric-acid A receptor" EXACT [] +xref: BEL:"GABR Family" +xref: GO:0004890 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:4075 ! GABRA1 +relationship: inverse_is_a HGNC:4076 ! GABRA2 +relationship: inverse_is_a HGNC:4077 ! GABRA3 +relationship: inverse_is_a HGNC:4078 ! GABRA4 +relationship: inverse_is_a HGNC:4079 ! GABRA5 +relationship: inverse_is_a HGNC:4080 ! GABRA6 +relationship: inverse_is_a HGNC:4081 ! GABRB1 +relationship: inverse_is_a HGNC:4082 ! GABRB2 +relationship: inverse_is_a HGNC:4083 ! GABRB3 +relationship: inverse_is_a HGNC:4084 ! GABRD +relationship: inverse_is_a HGNC:4085 ! GABRE +relationship: inverse_is_a HGNC:4086 ! GABRG1 +relationship: inverse_is_a HGNC:4087 ! GABRG2 +relationship: inverse_is_a HGNC:4088 ! GABRG3 +relationship: inverse_is_a HGNC:4089 ! GABRP +relationship: inverse_is_a HGNC:14454 ! GABRQ +relationship: inverse_is_a HGNC:4090 ! GABRR1 +relationship: inverse_is_a HGNC:4091 ! GABRR2 +relationship: inverse_is_a HGNC:17969 ! GABRR3 + +[Term] +id: FPLX:000180 +name: GALNT +synonym: "GALNT" EXACT [] +is_a: FPLX:000198 ! Glycosyltransferase +relationship: inverse_is_a HGNC:21725 ! GALNTL5 +relationship: inverse_is_a HGNC:33844 ! GALNTL6 +relationship: inverse_is_a HGNC:4123 ! GALNT1 +relationship: inverse_is_a HGNC:4124 ! GALNT2 +relationship: inverse_is_a HGNC:4125 ! GALNT3 +relationship: inverse_is_a HGNC:4126 ! GALNT4 +relationship: inverse_is_a HGNC:4127 ! GALNT5 +relationship: inverse_is_a HGNC:4128 ! GALNT6 +relationship: inverse_is_a HGNC:4129 ! GALNT7 +relationship: inverse_is_a HGNC:4130 ! GALNT8 +relationship: inverse_is_a HGNC:4131 ! GALNT9 +relationship: inverse_is_a HGNC:19873 ! GALNT10 +relationship: inverse_is_a HGNC:19875 ! GALNT11 +relationship: inverse_is_a HGNC:19877 ! GALNT12 +relationship: inverse_is_a HGNC:23242 ! GALNT13 +relationship: inverse_is_a HGNC:22946 ! GALNT14 +relationship: inverse_is_a HGNC:21531 ! GALNT15 +relationship: inverse_is_a HGNC:23233 ! GALNT16 +relationship: inverse_is_a HGNC:30488 ! GALNT18 +relationship: inverse_is_a HGNC:16347 ! GALNT17 + +[Term] +id: FPLX:000181 +name: Gamma-secretase +synonym: "gamma secretase" EXACT [] +synonym: "gamma-secretase" EXACT [] +synonym: "γ secretase" EXACT [] +xref: BEL:"gamma Secretase Complex" +xref: GO:0070765 +xref: NCIT:C95114 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:29509 ! APH1A +relationship: has_part HGNC:9508 ! PSEN1 +relationship: has_part HGNC:30100 ! PSENEN + +[Term] +id: FPLX:000182 +name: GAP +synonym: "GAP" EXACT [] +synonym: "GTPase-activating proteins" EXACT [] +xref: GO:0005096 +xref: NCIT:C17298 +is_a: FPLX:000000 ! famplex + +[Term] +id: FPLX:000183 +name: GAS6-receptor +synonym: "Gas6 receptors" EXACT [] +xref: BEL:"GAS6 Receptor Family" +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:905 ! AXL +relationship: inverse_is_a HGNC:7027 ! MERTK +relationship: inverse_is_a HGNC:12446 ! TYRO3 + +[Term] +id: FPLX:000184 +name: GATA +synonym: "GATA family" EXACT [] +synonym: "GATA" EXACT [] +xref: BEL:"GATA Family" +xref: MEDSCAN:urn:agi-aopfc:0000105 +xref: XFAM:PF00320 +xref: RE:R-HSA-996770 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:4170 ! GATA1 +relationship: inverse_is_a HGNC:4171 ! GATA2 +relationship: inverse_is_a HGNC:4172 ! GATA3 +relationship: inverse_is_a HGNC:4173 ! GATA4 +relationship: inverse_is_a HGNC:15802 ! GATA5 +relationship: inverse_is_a HGNC:4174 ! GATA6 + +[Term] +id: FPLX:000185 +name: GCNT +synonym: "GCNT" EXACT [] +synonym: "XYLT" EXACT [] +synonym: "Xylosyltransferase" EXACT [] +synonym: "Xylosyltransferases" EXACT [] +synonym: "xylosyltransferase" EXACT [] +synonym: "xylosyltransferases" EXACT [] +is_a: FPLX:000198 ! Glycosyltransferase +relationship: inverse_is_a HGNC:4203 ! GCNT1 +relationship: inverse_is_a HGNC:4204 ! GCNT2 +relationship: inverse_is_a HGNC:4205 ! GCNT3 +relationship: inverse_is_a HGNC:17973 ! GCNT4 +relationship: inverse_is_a HGNC:16099 ! GCNT7 +relationship: inverse_is_a HGNC:15516 ! XYLT1 +relationship: inverse_is_a HGNC:15517 ! XYLT2 + +[Term] +id: FPLX:000186 +name: GEF +synonym: "GEF" EXACT [] +synonym: "GEFs" EXACT [] +xref: GO:0008433 +xref: NCIT:C17494 +is_a: FPLX:000000 ! famplex + +[Term] +id: FPLX:000187 +name: GPCR +synonym: "Class C GPCR" EXACT [] +synonym: "GPCR" EXACT [] +synonym: "GPCRs" EXACT [] +xref: MEDSCAN:urn:agi-aopfc:0000311 +xref: MEDSCAN:urn:agi-complex:prophash-763d31b31e177311583df0ac1ea015da +xref: MEDSCAN:urn:agi-protfc:class%20c%20orphan%20receptor +xref: NCIT:C18239 +xref: SIGNOR:SIGNOR-PF33 +is_a: FPLX:000000 ! famplex + +[Term] +id: FPLX:000188 +name: GPIb-IX-V +synonym: "glycoprotein Ib-V-IX complex" EXACT [] +synonym: "Glycoprotein Ib-V-IX" EXACT [] +synonym: "Glycoprotein Ib/V/IX" EXACT [] +synonym: "GPIb-IX-V complex" EXACT [] +synonym: "GPIb-IX-V" EXACT [] +synonym: "GpIb-V-IX" EXACT [] +xref: BEL:"Ib-V-IX Complex" +xref: GO:1990779 +xref: NCIT:C126122 +xref: RE:R-HSA-114668 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:4439 ! GP1BA +relationship: has_part HGNC:4440 ! GP1BB +relationship: has_part HGNC:4443 ! GP5 +relationship: has_part HGNC:4444 ! GP9 + +[Term] +id: FPLX:000189 +name: GPIT +synonym: "glycosylphosphatidylinositol transamidase complex" EXACT [] +synonym: "GPI transamidase complex" EXACT [] +synonym: "GPIT complex" EXACT [] +synonym: "GPIT" EXACT [] +xref: BEL:"GPIT Complex" +xref: RE:R-HSA-162690 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:4446 ! GPAA1 +relationship: has_part HGNC:8965 ! PIGK +relationship: has_part HGNC:14937 ! PIGS +relationship: has_part HGNC:14938 ! PIGT +relationship: has_part HGNC:15791 ! PIGU + +[Term] +id: FPLX:000190 +name: GPX +synonym: "glutathione peroxidase" EXACT [] +xref: BEL:"GPX Family" +xref: ECCODE:1.11.1.9 +xref: IP:IPR000889 +xref: IP:IPR029760 +xref: NEXTPROT-FAMILY:01553 +xref: XFAM:PF00255 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:4553 ! GPX1 +relationship: inverse_is_a HGNC:4554 ! GPX2 +relationship: inverse_is_a HGNC:4555 ! GPX3 +relationship: inverse_is_a HGNC:4556 ! GPX4 +relationship: inverse_is_a HGNC:4557 ! GPX5 +relationship: inverse_is_a HGNC:4558 ! GPX6 +relationship: inverse_is_a HGNC:4559 ! GPX7 +relationship: inverse_is_a HGNC:33100 ! GPX8 + +[Term] +id: FPLX:000191 +name: GRIA +synonym: "AMPA glutamate receptor" EXACT [] +synonym: "AMPA receptor" EXACT [] +synonym: "AMPA-R" EXACT [] +synonym: "AMPA-subtype ionotropic glutamate receptors" EXACT [] +synonym: "AMPAR" EXACT [] +synonym: "AMPARs" EXACT [] +xref: BEL:"GRIA Family" +xref: GO:0032281 +xref: RE:R-HSA-399713 +xref: RE:R-HSA-416323 +xref: RE:R-HSA-420974 +xref: RE:R-HSA-421001 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:4571 ! GRIA1 +relationship: inverse_is_a HGNC:4572 ! GRIA2 +relationship: inverse_is_a HGNC:4573 ! GRIA3 +relationship: inverse_is_a HGNC:4574 ! GRIA4 + +[Term] +id: FPLX:000192 +name: GRK +synonym: "G protein-coupled receptor kinases" EXACT [] +synonym: "GPCR kinases" EXACT [] +synonym: "GRK" EXACT [] +synonym: "GRKs" EXACT [] +xref: BEL:"GRK Family" +xref: ECCODE:2.7.11.16 +xref: IP:IPR000239 +xref: NCIT:C26233 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a FPLX:000022 ! ADRBK +relationship: inverse_is_a HGNC:10013 ! GRK1 +relationship: inverse_is_a HGNC:4543 ! GRK4 +relationship: inverse_is_a HGNC:4544 ! GRK5 +relationship: inverse_is_a HGNC:4545 ! GRK6 +relationship: inverse_is_a HGNC:17031 ! GRK7 + +[Term] +id: FPLX:000193 +name: GRM +synonym: "glutamate metabotropic receptors" EXACT [] +synonym: "metabotrophic glutamate receptor" EXACT [] +synonym: "metabotropic glutamate receptor" EXACT [] +synonym: "mGluRs" EXACT [] +xref: BEL:"GRM Family" +xref: IP:IPR000162 +xref: MEDSCAN:urn:agi-protfc:mglur +xref: RE:R-HSA-420516 +xref: RE:R-HSA-420519 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:4593 ! GRM1 +relationship: inverse_is_a HGNC:4594 ! GRM2 +relationship: inverse_is_a HGNC:4595 ! GRM3 +relationship: inverse_is_a HGNC:4596 ! GRM4 +relationship: inverse_is_a HGNC:4597 ! GRM5 +relationship: inverse_is_a HGNC:4598 ! GRM6 +relationship: inverse_is_a HGNC:4599 ! GRM7 +relationship: inverse_is_a HGNC:4600 ! GRM8 + +[Term] +id: FPLX:000194 +name: GSK3 +synonym: "GSK-3" EXACT [] +synonym: "GSK3" EXACT [] +xref: BEL:"GSK3 Family" +xref: MEDSCAN:urn:agi-aopfc:0000434 +xref: NEXTPROT-FAMILY:03087 +xref: RE:R-HSA-198358 +xref: RE:R-HSA-198373 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:4616 ! GSK3A +relationship: inverse_is_a HGNC:4617 ! GSK3B + +[Term] +id: FPLX:000195 +name: GST +synonym: "glutathione S-transferase" EXACT [] +synonym: "GST" EXACT [] +synonym: "GSTs" EXACT [] +xref: BEL:"GST Family" +xref: NCIT:C16641 +xref: NEXTPROT-FAMILY:01669 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:4626 ! GSTA1 +relationship: inverse_is_a HGNC:4627 ! GSTA2 +relationship: inverse_is_a HGNC:4628 ! GSTA3 +relationship: inverse_is_a HGNC:4629 ! GSTA4 +relationship: inverse_is_a HGNC:19662 ! GSTA5 +relationship: inverse_is_a HGNC:16906 ! GSTK1 +relationship: inverse_is_a HGNC:4632 ! GSTM1 +relationship: inverse_is_a HGNC:4634 ! GSTM2 +relationship: inverse_is_a HGNC:4635 ! GSTM3 +relationship: inverse_is_a HGNC:4636 ! GSTM4 +relationship: inverse_is_a HGNC:4637 ! GSTM5 +relationship: inverse_is_a HGNC:13312 ! GSTO1 +relationship: inverse_is_a HGNC:23064 ! GSTO2 +relationship: inverse_is_a HGNC:4638 ! GSTP1 +relationship: inverse_is_a HGNC:4641 ! GSTT1 +relationship: inverse_is_a HGNC:4642 ! GSTT2 +relationship: inverse_is_a HGNC:4643 ! GSTZ1 +relationship: inverse_is_a HGNC:33437 ! GSTT2B + +[Term] +id: FPLX:000196 +name: GTF2E +synonym: "general transcription factor II E" EXACT [] +synonym: "TFIIE" EXACT [] +synonym: "transcription factor II E" EXACT [] +synonym: "transcription factor IIE" EXACT [] +xref: BEL:"GTF2E Complex" +xref: GO:0005673 +xref: RE:R-HSA-109633 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:4650 ! GTF2E1 +relationship: has_part HGNC:4651 ! GTF2E2 + +[Term] +id: FPLX:000197 +name: GTF2F +synonym: "general transcription factor II F" EXACT [] +synonym: "TFIIF" EXACT [] +synonym: "transcription factor II F" EXACT [] +synonym: "transcription factor IIF" EXACT [] +xref: BEL:"GTF2F Complex" +xref: GO:0005674 +xref: IP:IPR011039 +xref: RE:R-HSA-109631 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:4652 ! GTF2F1 +relationship: has_part HGNC:4653 ! GTF2F2 + +[Term] +id: FPLX:000198 +name: Glycosyltransferase +xref: MESH:D016695 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a FPLX:000002 ! A4GALT_family +relationship: inverse_is_a FPLX:000026 ! ALG10 +relationship: inverse_is_a FPLX:000027 ! ALG1_family +relationship: inverse_is_a FPLX:000028 ! ALG3_family +relationship: inverse_is_a FPLX:000029 ! ALG6_family +relationship: inverse_is_a FPLX:000030 ! ALG13_family +relationship: inverse_is_a FPLX:000063 ! B3GAT +relationship: inverse_is_a FPLX:000065 ! Beta_3_4_GTF +relationship: inverse_is_a FPLX:000112 ! COLGALT +relationship: inverse_is_a FPLX:000165 ! EXT +relationship: inverse_is_a FPLX:000176 ! FUT +relationship: inverse_is_a FPLX:000180 ! GALNT +relationship: inverse_is_a FPLX:000185 ! GCNT +relationship: inverse_is_a FPLX:000199 ! GTF_family_2 +relationship: inverse_is_a FPLX:000200 ! GTF_family_6 +relationship: inverse_is_a FPLX:000201 ! GTF_family_8 +relationship: inverse_is_a FPLX:000202 ! GTF_family_29 +relationship: inverse_is_a FPLX:000203 ! GTF_family_90 +relationship: inverse_is_a FPLX:000287 ! MGAT +relationship: inverse_is_a FPLX:000322 ! OGT_family +relationship: inverse_is_a FPLX:000396 ! PYG +relationship: inverse_is_a FPLX:000455 ! STT3 +relationship: inverse_is_a FPLX:000491 ! UGCG +relationship: inverse_is_a FPLX:000492 ! UGT +relationship: inverse_is_a FPLX:000493 ! UGGT + +[Term] +id: FPLX:000199 +name: GTF-family-2 +synonym: "Glycosyltransferase family 2" EXACT [] +synonym: "glycosyltransferase family 2" EXACT [] +is_a: FPLX:000198 ! Glycosyltransferase +relationship: inverse_is_a HGNC:20266 ! ALG5 +relationship: inverse_is_a HGNC:21727 ! B3GNTL1 +relationship: inverse_is_a HGNC:3005 ! DPM1 +relationship: inverse_is_a HGNC:4818 ! HAS1 +relationship: inverse_is_a HGNC:4819 ! HAS2 +relationship: inverse_is_a HGNC:4820 ! HAS3 + +[Term] +id: FPLX:000200 +name: GTF-family-6 +synonym: "Glycosyltransferase family 6" EXACT [] +synonym: "glycosyltransferase family 6" EXACT [] +is_a: FPLX:000198 ! Glycosyltransferase +relationship: inverse_is_a HGNC:79 ! ABO +relationship: inverse_is_a HGNC:30005 ! A3GALT2 +relationship: inverse_is_a HGNC:20460 ! GBGT1 +relationship: inverse_is_a HGNC:23671 ! GLT6D1 + +[Term] +id: FPLX:000201 +name: GTF-family-8 +synonym: "Glycosyltransferase family 8" EXACT [] +synonym: "glycosyltransferase family 8" EXACT [] +is_a: FPLX:000198 ! Glycosyltransferase +relationship: inverse_is_a HGNC:24870 ! GLT8D1 +relationship: inverse_is_a HGNC:24890 ! GLT8D2 +relationship: inverse_is_a HGNC:27482 ! GXYLT1 +relationship: inverse_is_a HGNC:33383 ! GXYLT2 +relationship: inverse_is_a HGNC:4699 ! GYG1 +relationship: inverse_is_a HGNC:4700 ! GYG2 +relationship: inverse_is_a HGNC:6511 ! LARGE1 +relationship: inverse_is_a HGNC:16522 ! LARGE2 +relationship: inverse_is_a HGNC:13530 ! RXYLT1 +relationship: inverse_is_a HGNC:26639 ! XXYLT1 + +[Term] +id: FPLX:000202 +name: GTF-family-29 +synonym: "Glycosyltransferase family 29" EXACT [] +synonym: "glycosyltransferase family 29" EXACT [] +synonym: "Sialytransferase" EXACT [] +synonym: "Sialytransferases" EXACT [] +synonym: "sialytransferase" EXACT [] +synonym: "sialytransferases" EXACT [] +is_a: FPLX:000198 ! Glycosyltransferase +relationship: inverse_is_a HGNC:10862 ! ST3GAL1 +relationship: inverse_is_a HGNC:10863 ! ST3GAL2 +relationship: inverse_is_a HGNC:10866 ! ST3GAL3 +relationship: inverse_is_a HGNC:10864 ! ST3GAL4 +relationship: inverse_is_a HGNC:10872 ! ST3GAL5 +relationship: inverse_is_a HGNC:18080 ! ST3GAL6 +relationship: inverse_is_a HGNC:23614 ! ST6GALNAC1 +relationship: inverse_is_a HGNC:10867 ! ST6GALNAC2 +relationship: inverse_is_a HGNC:19343 ! ST6GALNAC3 +relationship: inverse_is_a HGNC:17846 ! ST6GALNAC4 +relationship: inverse_is_a HGNC:19342 ! ST6GALNAC5 +relationship: inverse_is_a HGNC:23364 ! ST6GALNAC6 +relationship: inverse_is_a HGNC:10860 ! ST6GAL1 +relationship: inverse_is_a HGNC:10861 ! ST6GAL2 +relationship: inverse_is_a HGNC:10869 ! ST8SIA1 +relationship: inverse_is_a HGNC:10870 ! ST8SIA2 +relationship: inverse_is_a HGNC:14269 ! ST8SIA3 +relationship: inverse_is_a HGNC:10871 ! ST8SIA4 +relationship: inverse_is_a HGNC:17827 ! ST8SIA5 +relationship: inverse_is_a HGNC:23317 ! ST8SIA6 + +[Term] +id: FPLX:000203 +name: GTF-family-90 +synonym: "Glycosyltransferase family 90" EXACT [] +synonym: "glycosyltransferase family 90" EXACT [] +is_a: FPLX:000198 ! Glycosyltransferase +relationship: inverse_is_a HGNC:19350 ! POGLUT2 +relationship: inverse_is_a HGNC:28496 ! POGLUT3 +relationship: inverse_is_a HGNC:22954 ! POGLUT1 + +[Term] +id: FPLX:000204 +name: GTPase +synonym: "GTPase" EXACT [] +xref: ECCODE:3.6.5.- +xref: MEDSCAN:urn:agi-complex:prophash-e9fbfd73e486bda4d99b348f72bb4196 +xref: NCIT:C16650 +is_a: FPLX:000000 ! famplex + +[Term] +id: FPLX:000205 +name: GUCY +synonym: "guanylate cyclase" EXACT [] +synonym: "guanylyl cyclase" EXACT [] +xref: BEL:"GUCY Family" +xref: ECCODE:4.6.1.2 +xref: NCIT:C16653 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:4688 ! GUCY2C +relationship: inverse_is_a HGNC:4689 ! GUCY2D +relationship: inverse_is_a HGNC:4691 ! GUCY2F +relationship: inverse_is_a HGNC:7943 ! NPR1 +relationship: inverse_is_a HGNC:7944 ! NPR2 + +[Term] +id: FPLX:000206 +name: GYS +synonym: "glycogen synthase" EXACT [] +xref: BEL:"GYS Family" +xref: IP:IPR008631 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:4706 ! GYS1 +relationship: inverse_is_a HGNC:4707 ! GYS2 + +[Term] +id: FPLX:000207 +name: G-12 +synonym: "G(12)" EXACT [] +synonym: "G12 family" EXACT [] +synonym: "G12 proteins" EXACT [] +synonym: "G12" EXACT [] +xref: IP:IPR000469 +xref: RE:R-HSA-114547 +xref: RE:R-HSA-418570 +xref: RE:R-HSA-418572 +is_a: FPLX:000214 ! G_protein +relationship: has_part FPLX:000208 ! G_12_alpha + +[Term] +id: FPLX:000208 +name: G-12-alpha +synonym: "G-protein alpha-12" EXACT [] +synonym: "G-protein α-12" EXACT [] +synonym: "Ga12" EXACT [] +synonym: "Galpha12" EXACT [] +synonym: "Gα12" EXACT [] +xref: IP:IPR000469 +xref: RE:R-HSA-114525 +xref: RE:R-HSA-418570 +xref: RE:R-HSA-418572 +is_a: FPLX:000209 ! G_alpha +relationship: part_of FPLX:000207 ! G_12 +relationship: inverse_is_a HGNC:4380 ! GNA12 +relationship: inverse_is_a HGNC:4381 ! GNA13 + +[Term] +id: FPLX:000209 +name: G-alpha +synonym: "G_alpha" EXACT [] +synonym: "G_α" EXACT [] +xref: XFAM:PF00503 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a FPLX:000213 ! G_i_alpha +relationship: inverse_is_a FPLX:000218 ! G_s_alpha +relationship: inverse_is_a FPLX:000216 ! G_q_alpha +relationship: inverse_is_a FPLX:000208 ! G_12_alpha + +[Term] +id: FPLX:000210 +name: G-beta +synonym: "G protein beta" EXACT [] +synonym: "G protein β" EXACT [] +synonym: "G-protein beta" EXACT [] +synonym: "G-protein β" EXACT [] +synonym: "Gbeta" EXACT [] +synonym: "Gβ" EXACT [] +xref: BEL:"GNB Family" +xref: IP:IPR016346 +xref: RE:R-HSA-167409 +xref: RE:R-HSA-400093 +xref: RE:R-HSA-6814207 +xref: RE:R-HSA-6814413 +xref: RE:R-HSA-8850524 +xref: SIGNOR:SIGNOR-PF4 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:4396 ! GNB1 +relationship: inverse_is_a HGNC:4398 ! GNB2 +relationship: inverse_is_a HGNC:4400 ! GNB3 +relationship: inverse_is_a HGNC:20731 ! GNB4 +relationship: inverse_is_a HGNC:4401 ! GNB5 + +[Term] +id: FPLX:000211 +name: G-gamma +synonym: "G protein gamma subunit" EXACT [] +synonym: "G protein gamma" EXACT [] +synonym: "G protein γ subunit" EXACT [] +synonym: "G protein γ" EXACT [] +xref: BEL:"GNG Family" +xref: IP:IPR001770 +xref: NEXTPROT-FAMILY:01400 +xref: RE:R-HSA-167442 +xref: RE:R-HSA-400062 +xref: SIGNOR:SIGNOR-PF3 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:4402 ! GNG10 +relationship: inverse_is_a HGNC:4403 ! GNG11 +relationship: inverse_is_a HGNC:19663 ! GNG12 +relationship: inverse_is_a HGNC:14131 ! GNG13 +relationship: inverse_is_a HGNC:4404 ! GNG2 +relationship: inverse_is_a HGNC:4405 ! GNG3 +relationship: inverse_is_a HGNC:4407 ! GNG4 +relationship: inverse_is_a HGNC:4408 ! GNG5 +relationship: inverse_is_a HGNC:4410 ! GNG7 +relationship: inverse_is_a HGNC:19664 ! GNG8 +relationship: inverse_is_a HGNC:4411 ! GNGT1 +relationship: inverse_is_a HGNC:4412 ! GNGT2 + +[Term] +id: FPLX:000212 +name: G-i +synonym: "Gi protein" EXACT [] +synonym: "Gi" EXACT [] +xref: BEL:"GNAI Family" +xref: IP:IPR001408 +xref: RE:R-HSA-111864 +xref: RE:R-HSA-167410 +xref: RE:R-HSA-167413 +xref: RE:R-HSA-167438 +is_a: FPLX:000214 ! G_protein +relationship: has_part FPLX:000213 ! G_i_alpha + +[Term] +id: FPLX:000213 +name: G-i-alpha +synonym: "G alphai" EXACT [] +synonym: "G αi" EXACT [] +synonym: "G-Protein alpha-i" EXACT [] +synonym: "G-Protein α-i" EXACT [] +synonym: "Galphai" EXACT [] +synonym: "Gi alpha subunit" EXACT [] +synonym: "Gi alpha" EXACT [] +synonym: "Gi α subunit" EXACT [] +synonym: "Gi α" EXACT [] +synonym: "Gαi" EXACT [] +xref: IP:IPR001408 +xref: NCIT:C19275 +xref: RE:R-HSA-111864 +xref: RE:R-HSA-167410 +xref: RE:R-HSA-167413 +xref: RE:R-HSA-167438 +is_a: FPLX:000209 ! G_alpha +relationship: part_of FPLX:000212 ! G_i +relationship: inverse_is_a HGNC:4389 ! GNAO1 +relationship: inverse_is_a HGNC:4384 ! GNAI1 +relationship: inverse_is_a HGNC:4385 ! GNAI2 +relationship: inverse_is_a HGNC:4387 ! GNAI3 +relationship: inverse_is_a HGNC:4393 ! GNAT1 +relationship: inverse_is_a HGNC:4394 ! GNAT2 +relationship: inverse_is_a HGNC:22800 ! GNAT3 +relationship: inverse_is_a HGNC:4395 ! GNAZ + +[Term] +id: FPLX:000214 +name: G-protein +synonym: "G protein" EXACT [] +synonym: "G proteins" EXACT [] +xref: NCIT:C17458 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a FPLX:000212 ! G_i +relationship: inverse_is_a FPLX:000217 ! G_s +relationship: inverse_is_a FPLX:000215 ! G_q +relationship: inverse_is_a FPLX:000207 ! G_12 + +[Term] +id: FPLX:000215 +name: G-q +synonym: "G(q/11)" EXACT [] +synonym: "Gq/11" EXACT [] +xref: BEL:"GNA Gq Family" +xref: IP:IPR000654 +xref: RE:R-HSA-114534 +xref: RE:R-HSA-114556 +xref: RE:R-HSA-374848 +xref: RE:R-HSA-399987 +xref: RE:R-HSA-399992 +xref: RE:R-HSA-400000 +xref: RE:R-HSA-400008 +xref: RE:R-HSA-749499 +is_a: FPLX:000214 ! G_protein +relationship: has_part FPLX:000216 ! G_q_alpha + +[Term] +id: FPLX:000216 +name: G-q-alpha +synonym: "G alphaq" EXACT [] +synonym: "G αq" EXACT [] +synonym: "G-Protein alpha-q" EXACT [] +synonym: "G-Protein α-q" EXACT [] +synonym: "Galphaq" EXACT [] +synonym: "Gq alpha subunit" EXACT [] +synonym: "Gq alpha" EXACT [] +synonym: "Gq α subunit" EXACT [] +synonym: "Gq α" EXACT [] +synonym: "Gαq" EXACT [] +xref: IP:IPR000654 +xref: RE:R-HSA-114534 +xref: RE:R-HSA-114556 +xref: RE:R-HSA-374848 +xref: RE:R-HSA-399987 +xref: RE:R-HSA-399992 +xref: RE:R-HSA-400000 +xref: RE:R-HSA-400008 +xref: RE:R-HSA-749499 +is_a: FPLX:000209 ! G_alpha +relationship: part_of FPLX:000215 ! G_q +relationship: inverse_is_a HGNC:4390 ! GNAQ +relationship: inverse_is_a HGNC:4379 ! GNA11 +relationship: inverse_is_a HGNC:4382 ! GNA14 +relationship: inverse_is_a HGNC:4383 ! GNA15 + +[Term] +id: FPLX:000217 +name: G-s +synonym: "G protein Gs" EXACT [] +synonym: "G protein(s)" EXACT [] +synonym: "G S protein" EXACT [] +synonym: "Gs family" EXACT [] +synonym: "Gs protein" EXACT [] +xref: BEL:"GNA Gs Family" +is_a: FPLX:000214 ! G_protein +relationship: has_part FPLX:000218 ! G_s_alpha + +[Term] +id: FPLX:000218 +name: G-s-alpha +synonym: "G alphaS" EXACT [] +synonym: "G αS" EXACT [] +synonym: "G-alpha(s)" EXACT [] +synonym: "G-AlphaS" EXACT [] +synonym: "G-Protein alpha-s" EXACT [] +synonym: "G-Protein α-s" EXACT [] +synonym: "G-α(s)" EXACT [] +synonym: "G-αS" EXACT [] +synonym: "GalphaS" EXACT [] +synonym: "Gs alpha subunit" EXACT [] +synonym: "Gs alpha" EXACT [] +synonym: "Gs α subunit" EXACT [] +synonym: "Gs α" EXACT [] +synonym: "GαS" EXACT [] +is_a: FPLX:000209 ! G_alpha +relationship: part_of FPLX:000217 ! G_s +relationship: inverse_is_a HGNC:4392 ! GNAS +relationship: inverse_is_a HGNC:4388 ! GNAL + +[Term] +id: FPLX:000219 +name: hCG +synonym: "hCG" EXACT [] +xref: NCIT:C2275 +xref: RE:R-HSA-378941 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:1885 ! CGA +relationship: has_part HGNC:1886 ! CGB3 + +[Term] +id: FPLX:000220 +name: HDAC +synonym: "HDAC" EXACT [] +synonym: "histone deacetylase" EXACT [] +synonym: "histone deacetylases" EXACT [] +xref: BEL:"HDAC Family" +xref: ECCODE:3.5.1.98 +xref: IP:IPR003084 +xref: MEDSCAN:urn:agi-complex:prophash-7e8823afb9ca7870b95633dcb782500b +xref: NCIT:C16682 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a FPLX:000221 ! HDAC_I +relationship: inverse_is_a FPLX:000222 ! HDAC_II +relationship: inverse_is_a FPLX:000223 ! HDAC_III +relationship: inverse_is_a FPLX:000224 ! HDAC_IV + +[Term] +id: FPLX:000221 +name: HDAC-I +synonym: "Class I HDACs" EXACT [] +synonym: "class I HDACs" EXACT [] +synonym: "class I histone deacetylases" EXACT [] +xref: BEL:"HDAC Class I Family" +xref: IP:IPR003084 +is_a: FPLX:000220 ! HDAC +relationship: inverse_is_a HGNC:4852 ! HDAC1 +relationship: inverse_is_a HGNC:4853 ! HDAC2 +relationship: inverse_is_a HGNC:4854 ! HDAC3 +relationship: inverse_is_a HGNC:13315 ! HDAC8 + +[Term] +id: FPLX:000222 +name: HDAC-II +synonym: "class II HDACs" EXACT [] +synonym: "class II histone deacetylases" EXACT [] +xref: BEL:"HDAC Class II Family" +is_a: FPLX:000220 ! HDAC +relationship: inverse_is_a HGNC:14063 ! HDAC4 +relationship: inverse_is_a HGNC:14068 ! HDAC5 +relationship: inverse_is_a HGNC:14067 ! HDAC7 +relationship: inverse_is_a HGNC:14065 ! HDAC9 +relationship: inverse_is_a HGNC:14064 ! HDAC6 +relationship: inverse_is_a HGNC:18128 ! HDAC10 + +[Term] +id: FPLX:000223 +name: HDAC-III +synonym: "Class III HDACs" EXACT [] +synonym: "class III HDACs" EXACT [] +synonym: "class III histone deacetylases" EXACT [] +xref: IP:IPR003000 +xref: IP:IPR026590 +is_a: FPLX:000220 ! HDAC +relationship: inverse_is_a HGNC:14929 ! SIRT1 +relationship: inverse_is_a HGNC:10886 ! SIRT2 +relationship: inverse_is_a HGNC:14931 ! SIRT3 +relationship: inverse_is_a HGNC:14932 ! SIRT4 +relationship: inverse_is_a HGNC:14933 ! SIRT5 +relationship: inverse_is_a HGNC:14934 ! SIRT6 +relationship: inverse_is_a HGNC:14935 ! SIRT7 + +[Term] +id: FPLX:000224 +name: HDAC-IV +synonym: "Class IV HDACs" EXACT [] +synonym: "class IV HDACs" EXACT [] +synonym: "class IV histone deacetylases" EXACT [] +is_a: FPLX:000220 ! HDAC +relationship: inverse_is_a HGNC:19086 ! HDAC11 + +[Term] +id: FPLX:000225 +name: HDL +synonym: "HDL" EXACT [] +synonym: "High-density lipoproteins" EXACT [] +xref: BEL:"HDL Complex" +xref: GO:0034364 +xref: NCIT:C25186 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:399 ! ALB +relationship: has_part HGNC:600 ! APOA1 +relationship: has_part HGNC:601 ! APOA2 +relationship: has_part HGNC:613 ! APOE +relationship: has_part HGNC:2095 ! CLU + +[Term] +id: FPLX:000226 +name: Hedgehog +synonym: "Hedgehog family" EXACT [] +synonym: "hedgehog protein" EXACT [] +synonym: "hedgehog signaling proteins" EXACT [] +synonym: "Hedgehog" EXACT [] +synonym: "Hh" EXACT [] +xref: BEL:"Hedgehog Family" +xref: IP:IPR000320 +xref: IP:IPR001657 +xref: IP:IPR001767 +xref: IP:IPR003586 +xref: IP:IPR003587 +xref: IP:IPR009045 +xref: IP:IPR028992 +xref: MEDSCAN:urn:agi-aopfc:0000587 +xref: NCIT:C120493 +xref: NEXTPROT-FAMILY:01729 +xref: RE:R-HSA-5358286 +xref: RE:R-HSA-5358318 +xref: RE:R-HSA-5358332 +xref: RE:R-HSA-5362382 +xref: RE:R-HSA-5362391 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:2865 ! DHH +relationship: inverse_is_a HGNC:5956 ! IHH +relationship: inverse_is_a HGNC:10848 ! SHH + +[Term] +id: FPLX:000227 +name: Hemoglobin +synonym: "hemoglobin" EXACT [] +xref: BEL:"Hemoglobin Complex" +xref: MEDSCAN:urn:agi-protfc:hemoglobin +xref: NCIT:C16676 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:4823 ! HBA1 +relationship: has_part HGNC:4824 ! HBA2 +relationship: has_part HGNC:4827 ! HBB +relationship: has_part HGNC:4829 ! HBD +relationship: has_part HGNC:4830 ! HBE1 +relationship: has_part HGNC:4831 ! HBG1 +relationship: has_part HGNC:4832 ! HBG2 +relationship: has_part HGNC:4826 ! HBM +relationship: has_part HGNC:4833 ! HBQ1 +relationship: has_part HGNC:4835 ! HBZ + +[Term] +id: FPLX:000228 +name: HES +synonym: "Hes gene family" EXACT [] +synonym: "Hes genes" EXACT [] +synonym: "HES" EXACT [] +synonym: "Hes" EXACT [] +xref: BEL:"HES Family" +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:5192 ! HES1 +relationship: inverse_is_a HGNC:16005 ! HES2 +relationship: inverse_is_a HGNC:26226 ! HES3 +relationship: inverse_is_a HGNC:24149 ! HES4 +relationship: inverse_is_a HGNC:19764 ! HES5 +relationship: inverse_is_a HGNC:18254 ! HES6 +relationship: inverse_is_a HGNC:15977 ! HES7 + +[Term] +id: FPLX:000229 +name: HIF +synonym: "HIF" EXACT [] +synonym: "HIFs" EXACT [] +synonym: "hypoxia-inducible factors" EXACT [] +xref: NCIT:C113839 +xref: RE:R-HSA-1234130 +is_a: FPLX:000000 ! famplex +relationship: has_part FPLX:000231 ! HIF_alpha +relationship: has_part FPLX:000232 ! HIF_beta + +[Term] +id: FPLX:000230 +name: HIF1 +synonym: "HIF-1" EXACT [] +xref: MEDSCAN:urn:agi-complex:HIF-1 +xref: MEDSCAN:urn:agi-complex:prophash-44f61960049704dc2afb23ff7c324b85 +xref: NCIT:C17690 +xref: XFAM:PF11413 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:4910 ! HIF1A +relationship: has_part HGNC:700 ! ARNT + +[Term] +id: FPLX:000231 +name: HIF-alpha +synonym: "HIFalpha" EXACT [] +synonym: "Hifalpha" EXACT [] +synonym: "HIFα" EXACT [] +synonym: "Hifα" EXACT [] +xref: RE:R-HSA-1234147 +relationship: part_of FPLX:000229 ! HIF +relationship: inverse_is_a HGNC:4910 ! HIF1A +relationship: inverse_is_a HGNC:3374 ! EPAS1 +relationship: inverse_is_a HGNC:15825 ! HIF3A + +[Term] +id: FPLX:000232 +name: HIF-beta +synonym: "HIFbeta" EXACT [] +synonym: "Hifbeta" EXACT [] +synonym: "HIFβ" EXACT [] +synonym: "Hifβ" EXACT [] +xref: RE:R-HSA-8936837 +relationship: part_of FPLX:000229 ! HIF +relationship: inverse_is_a HGNC:700 ! ARNT +relationship: inverse_is_a HGNC:16876 ! ARNT2 +relationship: inverse_is_a HGNC:701 ! ARNTL + +[Term] +id: FPLX:000233 +name: Histone +synonym: "Histone" EXACT [] +synonym: "histone" EXACT [] +synonym: "histones" EXACT [] +xref: BEL:"Histone Family" +xref: MEDSCAN:urn:agi-complex:prophash-0f8242e28423189d7ef714808fdcc121 +xref: MEDSCAN:urn:agi-protfc:histone +xref: MESH:D006657 +xref: NCIT:C16687 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a FPLX:000234 ! Histone_H1 +relationship: inverse_is_a FPLX:000235 ! Histone_H2A +relationship: inverse_is_a FPLX:000236 ! Histone_H2B +relationship: inverse_is_a FPLX:000237 ! Histone_H3 +relationship: inverse_is_a FPLX:000238 ! Histone_H4 + +[Term] +id: FPLX:000234 +name: Histone-H1 +synonym: "histone H1" EXACT [] +xref: BEL:"Histone H1 Family" +xref: MEDSCAN:urn:agi-protfc:histone%20H1 +xref: NCIT:C16683 +is_a: FPLX:000233 ! Histone +relationship: inverse_is_a HGNC:4714 ! H1F0 +relationship: inverse_is_a HGNC:18463 ! H1FOO +relationship: inverse_is_a HGNC:4722 ! H1FX +relationship: inverse_is_a HGNC:4715 ! HIST1H1A +relationship: inverse_is_a HGNC:4719 ! HIST1H1B +relationship: inverse_is_a HGNC:4716 ! HIST1H1C +relationship: inverse_is_a HGNC:4717 ! HIST1H1D +relationship: inverse_is_a HGNC:4718 ! HIST1H1E +relationship: inverse_is_a HGNC:4720 ! HIST1H1T +relationship: inverse_is_a HGNC:24893 ! H1FNT + +[Term] +id: FPLX:000235 +name: Histone-H2A +synonym: "Histone 2A" EXACT [] +synonym: "Histone H2A" EXACT [] +synonym: "histone H2A" EXACT [] +xref: BEL:"Histone H2A Family" +xref: MEDSCAN:urn:agi-protfc:histone%20H2A +xref: NCIT:C16684 +xref: NEXTPROT-FAMILY:01762 +is_a: FPLX:000233 ! Histone +relationship: inverse_is_a UP:H2A1_HUMAN ! P0C0S8 +relationship: inverse_is_a HGNC:22516 ! H2AFB1 +relationship: inverse_is_a UP:H2AB1_HUMAN ! P0C5Y9 +relationship: inverse_is_a HGNC:14456 ! H2AFJ +relationship: inverse_is_a HGNC:20664 ! H2AFV +relationship: inverse_is_a HGNC:4739 ! H2AFX +relationship: inverse_is_a HGNC:4740 ! H2AFY +relationship: inverse_is_a HGNC:14453 ! H2AFY2 +relationship: inverse_is_a HGNC:4741 ! H2AFZ +relationship: inverse_is_a HGNC:18729 ! HIST1H2AA +relationship: inverse_is_a HGNC:4733 ! HIST1H2AC +relationship: inverse_is_a HGNC:4729 ! HIST1H2AD +relationship: inverse_is_a HGNC:13671 ! HIST1H2AH +relationship: inverse_is_a HGNC:4727 ! HIST1H2AJ +relationship: inverse_is_a HGNC:20508 ! HIST2H2AB +relationship: inverse_is_a HGNC:4738 ! HIST2H2AC +relationship: inverse_is_a HGNC:20507 ! HIST3H2A +relationship: inverse_is_a UP:H2A1B_HUMAN ! P04908 +relationship: inverse_is_a UP:H2A2A_HUMAN ! Q6FI13 + +[Term] +id: FPLX:000236 +name: Histone-H2B +synonym: "H2B" EXACT [] +synonym: "histone H2B" EXACT [] +xref: BEL:"Histone H2B Family" +xref: MEDSCAN:urn:agi-protfc:histone%20H2B +is_a: FPLX:000233 ! Histone +relationship: inverse_is_a UP:H2B1C_HUMAN ! P62807 +relationship: inverse_is_a HGNC:18730 ! HIST1H2BA +relationship: inverse_is_a HGNC:4751 ! HIST1H2BB +relationship: inverse_is_a HGNC:4747 ! HIST1H2BD +relationship: inverse_is_a HGNC:4755 ! HIST1H2BH +relationship: inverse_is_a HGNC:4761 ! HIST1H2BJ +relationship: inverse_is_a HGNC:13954 ! HIST1H2BK +relationship: inverse_is_a HGNC:4748 ! HIST1H2BL +relationship: inverse_is_a HGNC:4750 ! HIST1H2BM +relationship: inverse_is_a HGNC:4749 ! HIST1H2BN +relationship: inverse_is_a HGNC:4758 ! HIST1H2BO +relationship: inverse_is_a HGNC:20516 ! HIST2H2BC +relationship: inverse_is_a HGNC:20517 ! HIST2H2BD +relationship: inverse_is_a HGNC:4760 ! HIST2H2BE +relationship: inverse_is_a HGNC:24700 ! HIST2H2BF +relationship: inverse_is_a HGNC:20514 ! HIST3H2BB +relationship: inverse_is_a HGNC:4762 ! H2BFS +relationship: inverse_is_a HGNC:27867 ! H2BFM +relationship: inverse_is_a HGNC:27252 ! H2BFWT + +[Term] +id: FPLX:000237 +name: Histone-H3 +synonym: "H3" EXACT [] +synonym: "histone H3" EXACT [] +synonym: "histone-3" EXACT [] +xref: BEL:"Histone H3 Family" +xref: IP:IPR000164 +xref: MEDSCAN:urn:agi-protfc:histone%20H3 +xref: NCIT:C16685 +xref: NEXTPROT-FAMILY:01764 +is_a: FPLX:000233 ! Histone +relationship: inverse_is_a UP:H31_HUMAN ! P68431 +relationship: inverse_is_a UP:H32_HUMAN ! Q71DI3 +relationship: inverse_is_a HGNC:4778 ! HIST3H3 +relationship: inverse_is_a UP:H33_HUMAN ! P84243 +relationship: inverse_is_a HGNC:33164 ! H3F3C + +[Term] +id: FPLX:000238 +name: Histone-H4 +synonym: "histone H4" EXACT [] +xref: BEL:"Histone H4 Family" +xref: IP:IPR001951 +xref: MEDSCAN:urn:agi-protfc:histone%20H4 +xref: NCIT:C16686 +xref: NEXTPROT-FAMILY:01765 +is_a: FPLX:000233 ! Histone +relationship: inverse_is_a UP:H4_HUMAN ! P62805 +relationship: inverse_is_a HGNC:4792 ! HIST1H4G + +[Term] +id: FPLX:000239 +name: HLA-DR +synonym: "HLA-DR" EXACT [] +xref: BEL:"HLA-DR Family" +xref: NCIT:C16692 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:4947 ! HLA-DRA +relationship: inverse_is_a HGNC:4948 ! HLA-DRB1 +relationship: inverse_is_a HGNC:4951 ! HLA-DRB3 +relationship: inverse_is_a HGNC:4952 ! HLA-DRB4 +relationship: inverse_is_a HGNC:4953 ! HLA-DRB5 + +[Term] +id: FPLX:000240 +name: HMOX +synonym: "haem oxygenase" EXACT [] +synonym: "heme oxygenase" EXACT [] +xref: BEL:"HMOX Family" +xref: ECCODE:1.14.99.3 +xref: IP:IPR002051 +xref: IP:IPR016053 +xref: IP:IPR016084 +xref: IP:IPR018207 +xref: RE:R-HSA-189382 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:5013 ! HMOX1 +relationship: inverse_is_a HGNC:5014 ! HMOX2 + +[Term] +id: FPLX:000241 +name: HSP90 +synonym: "HSP90" EXACT [] +synonym: "Hsp90" EXACT [] +xref: BEL:"HSP90 Family" +xref: NCIT:C17766 +xref: XFAM:PF00183 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a FPLX:000242 ! HSP90A +relationship: inverse_is_a HGNC:12028 ! HSP90B1 +relationship: inverse_is_a HGNC:16264 ! TRAP1 + +[Term] +id: FPLX:000242 +name: HSP90A +synonym: "HSP90A" EXACT [] +xref: RE:R-HSA-3371429 +xref: RE:R-HSA-419619 +xref: RE:R-HSA-5082395 +xref: RE:R-HSA-5618088 +is_a: FPLX:000241 ! HSP90 +relationship: inverse_is_a FPLX:000243 ! HSP90AA +relationship: inverse_is_a HGNC:5258 ! HSP90AB1 + +[Term] +id: FPLX:000243 +name: HSP90AA +synonym: "HSP90AA" EXACT [] +xref: RE:R-HSA-1218829 +xref: RE:R-HSA-1221657 +xref: RE:R-HSA-5082406 +is_a: FPLX:000242 ! HSP90A +relationship: inverse_is_a HGNC:5253 ! HSP90AA1 + +[Term] +id: FPLX:000244 +name: HSPA +synonym: "Heat Shock Protein 70" EXACT [] +synonym: "HSP70" EXACT [] +synonym: "Hsp70" EXACT [] +xref: BEL:"HSPA Family" +xref: XFAM:PF00012 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:19022 ! HSPA12A +relationship: inverse_is_a HGNC:16193 ! HSPA12B +relationship: inverse_is_a HGNC:11375 ! HSPA13 +relationship: inverse_is_a HGNC:29526 ! HSPA14 +relationship: inverse_is_a HGNC:5232 ! HSPA1A +relationship: inverse_is_a HGNC:5233 ! HSPA1B +relationship: inverse_is_a HGNC:5234 ! HSPA1L +relationship: inverse_is_a HGNC:5235 ! HSPA2 +relationship: inverse_is_a HGNC:5237 ! HSPA4 +relationship: inverse_is_a HGNC:17041 ! HSPA4L +relationship: inverse_is_a HGNC:5238 ! HSPA5 +relationship: inverse_is_a HGNC:5239 ! HSPA6 +relationship: inverse_is_a HGNC:5241 ! HSPA8 +relationship: inverse_is_a HGNC:5244 ! HSPA9 +relationship: inverse_is_a HGNC:16969 ! HSPH1 +relationship: inverse_is_a HGNC:16931 ! HYOU1 + +[Term] +id: FPLX:000245 +name: HSPB +synonym: "heat shock protein family B" EXACT [] +synonym: "HSPB proteins" EXACT [] +synonym: "HSPB" EXACT [] +synonym: "small HSPs" EXACT [] +xref: BEL:"HSPB Family" +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:5246 ! HSPB1 +relationship: inverse_is_a HGNC:5247 ! HSPB2 +relationship: inverse_is_a HGNC:30171 ! HSPB8 + +[Term] +id: FPLX:000246 +name: IFNA +synonym: "IFN-a" EXACT [] +synonym: "IFN-alpha" EXACT [] +synonym: "IFN-α" EXACT [] +synonym: "IFNalpha" EXACT [] +synonym: "IFNα" EXACT [] +xref: BEL:"IFNA Family" +xref: RE:R-HSA-909688 +is_a: FPLX:000262 ! Interferon +relationship: inverse_is_a HGNC:5417 ! IFNA1 +relationship: inverse_is_a HGNC:5423 ! IFNA2 +relationship: inverse_is_a HGNC:5425 ! IFNA4 +relationship: inverse_is_a HGNC:5426 ! IFNA5 +relationship: inverse_is_a HGNC:5427 ! IFNA6 +relationship: inverse_is_a HGNC:5428 ! IFNA7 +relationship: inverse_is_a HGNC:5429 ! IFNA8 +relationship: inverse_is_a HGNC:5418 ! IFNA10 +relationship: inverse_is_a HGNC:5419 ! IFNA13 +relationship: inverse_is_a HGNC:5420 ! IFNA14 +relationship: inverse_is_a HGNC:5421 ! IFNA16 +relationship: inverse_is_a HGNC:5422 ! IFNA17 +relationship: inverse_is_a HGNC:5424 ! IFNA21 + +[Term] +id: FPLX:000247 +name: IFNB +synonym: "beta interferons" EXACT [] +synonym: "IFN-beta" EXACT [] +synonym: "IFN-β" EXACT [] +synonym: "Interferon beta" EXACT [] +synonym: "interferon beta" EXACT [] +synonym: "Interferon β" EXACT [] +synonym: "interferon β" EXACT [] +synonym: "β interferons" EXACT [] +xref: IP:IPR015588 +xref: NCIT:C20495 +is_a: FPLX:000262 ! Interferon +relationship: inverse_is_a HGNC:5434 ! IFNB1 + +[Term] +id: FPLX:000248 +name: IGFBP +synonym: "IGF-BP" EXACT [] +synonym: "IGFBP" EXACT [] +synonym: "IGFBPs" EXACT [] +synonym: "insulin-like growth factor binding proteins" EXACT [] +xref: BEL:"IGFBP Family" +xref: MEDSCAN:urn:agi-aopfc:0000586 +xref: XFAM:PF00219 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:5469 ! IGFBP1 +relationship: inverse_is_a HGNC:5471 ! IGFBP2 +relationship: inverse_is_a HGNC:5472 ! IGFBP3 +relationship: inverse_is_a HGNC:5473 ! IGFBP4 +relationship: inverse_is_a HGNC:5474 ! IGFBP5 +relationship: inverse_is_a HGNC:5475 ! IGFBP6 +relationship: inverse_is_a HGNC:5476 ! IGFBP7 + +[Term] +id: FPLX:000249 +name: IKB +synonym: "IkappaB" EXACT [] +synonym: "IκB" EXACT [] +xref: NCIT:C17583 +is_a: FPLX:000000 ! famplex + +[Term] +id: FPLX:000250 +name: IKK-complex +synonym: "IKK complex" EXACT [] +xref: BEL:"IkappaB Kinase Complex" +xref: MEDSCAN:urn:agi-complex:IKK%20complex +xref: RE:R-HSA-1168621 +xref: RE:R-HSA-168113 +xref: RE:R-HSA-177663 +xref: RE:R-HSA-202513 +xref: RE:R-HSA-202562 +xref: RE:R-HSA-5262981 +xref: RE:R-HSA-727820 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:1974 ! CHUK +relationship: has_part HGNC:5960 ! IKBKB +relationship: has_part HGNC:5961 ! IKBKG + +[Term] +id: FPLX:000251 +name: IKK-family +synonym: "IkappaB kinase" EXACT [] +synonym: "IKK" EXACT [] +synonym: "IκB kinase" EXACT [] +xref: BEL:"IkappaB Kinase Family" +xref: NCIT:C104199 +xref: NEXTPROT-FAMILY:03104 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:1974 ! CHUK +relationship: inverse_is_a HGNC:5960 ! IKBKB +relationship: inverse_is_a HGNC:5961 ! IKBKG +relationship: inverse_is_a HGNC:14552 ! IKBKE +relationship: inverse_is_a HGNC:11584 ! TBK1 + +[Term] +id: FPLX:000252 +name: IL1 +synonym: "IL-1" EXACT [] +synonym: "IL1 family" EXACT [] +xref: BEL:"IL1 Family" +xref: IP:IPR003502 +xref: MEDSCAN:urn:agi-aopfc:0000615 +xref: NCIT:C20506 +xref: NEXTPROT-FAMILY:01820 +xref: XFAM:PF00340 +xref: RE:R-HSA-445744 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:5991 ! IL1A +relationship: inverse_is_a HGNC:5992 ! IL1B + +[Term] +id: FPLX:000253 +name: IL12 +synonym: "IL-12" EXACT [] +synonym: "IL12" EXACT [] +xref: MEDSCAN:urn:agi-complex:IL12 +xref: NCIT:C20514 +xref: XFAM:PF03039 +xref: RE:R-HSA-447102 +xref: RE:R-HSA-8950122 +xref: RE:R-HSA-8950228 +xref: RE:R-HSA-8950694 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:5969 ! IL12A +relationship: inverse_is_a HGNC:5970 ! IL12B + +[Term] +id: FPLX:000254 +name: IL15R +synonym: "IL-15 receptor" EXACT [] +synonym: "IL-15R" EXACT [] +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:5978 ! IL15RA +relationship: has_part HGNC:6009 ! IL2RB +relationship: has_part HGNC:6010 ! IL2RG + +[Term] +id: FPLX:000255 +name: IL2R +synonym: "IL-2 receptor" EXACT [] +synonym: "IL-2R" EXACT [] +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:6008 ! IL2RA +relationship: has_part HGNC:6009 ! IL2RB +relationship: has_part HGNC:6010 ! IL2RG + +[Term] +id: FPLX:000256 +name: Inhibin +synonym: "Inhibin" EXACT [] +synonym: "inhibin" EXACT [] +xref: GO:0043511 +xref: NCIT:C2276 +xref: RE:R-HSA-1449688 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a FPLX:000257 ! Inhibin_A +relationship: inverse_is_a FPLX:000258 ! Inhibin_B + +[Term] +id: FPLX:000257 +name: Inhibin-A +synonym: "inhibin A" EXACT [] +synonym: "inhibin-A" EXACT [] +synonym: "inhibin-a" EXACT [] +xref: MEDSCAN:urn:agi-complex:inhibin%20A +xref: NCIT:C2277 +is_a: FPLX:000256 ! Inhibin +relationship: has_part HGNC:6065 ! INHA +relationship: has_part HGNC:6066 ! INHBA + +[Term] +id: FPLX:000258 +name: Inhibin-B +synonym: "inhibin B" EXACT [] +synonym: "inhibin-B" EXACT [] +synonym: "inhibin-b" EXACT [] +xref: NCIT:C2278 +is_a: FPLX:000256 ! Inhibin +relationship: has_part HGNC:6065 ! INHA +relationship: has_part HGNC:6067 ! INHBB + +[Term] +id: FPLX:000259 +name: INS +synonym: "insulin family" EXACT [] +xref: BEL:"INS Family" +xref: NEXTPROT-FAMILY:01869 +xref: RE:R-HSA-429349 +xref: RE:R-HSA-429352 +xref: RE:R-HSA-429384 +xref: RE:R-HSA-429407 +xref: RE:R-HSA-429472 +xref: RE:R-HSA-74674 +xref: RE:R-HSA-77385 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:6081 ! INS + +[Term] +id: FPLX:000260 +name: INSR +synonym: "Insulin receptor family" EXACT [] +synonym: "insulin receptor family" EXACT [] +synonym: "insulin receptor/insulin-like growth factor receptor family" EXACT [] +xref: BEL:"INSR Family" +xref: IP:IPR016246 +xref: MEDSCAN:urn:agi-aopfc:0000264 +xref: NEXTPROT-FAMILY:03128 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:5465 ! IGF1R +relationship: inverse_is_a HGNC:6091 ! INSR +relationship: inverse_is_a HGNC:6093 ! INSRR + +[Term] +id: FPLX:000261 +name: Integrins +synonym: "alpha2beta1 integrin" EXACT [] +synonym: "integrin" EXACT [] +synonym: "integrins" EXACT [] +synonym: "LFA-1 (integrin)" EXACT [] +synonym: "MAC-1 (integrin)" EXACT [] +synonym: "vitronectin receptor (integrin)" EXACT [] +xref: GO:0034666 +xref: GO:0034683 +xref: GO:0034687 +xref: MEDSCAN:urn:agi-complex:MAC-1%20(integrin) +xref: NCIT:C16748 +is_a: FPLX:000000 ! famplex + +[Term] +id: FPLX:000262 +name: Interferon +synonym: "IFN" EXACT [] +synonym: "interferon" EXACT [] +xref: MEDSCAN:urn:agi-protfc:interferon +xref: NCIT:C20493 +xref: XFAM:PF00143 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a FPLX:000246 ! IFNA +relationship: inverse_is_a FPLX:000247 ! IFNB +relationship: inverse_is_a HGNC:21714 ! IFNK +relationship: inverse_is_a HGNC:5448 ! IFNW1 + +[Term] +id: FPLX:000263 +name: Interferon-gamma-receptor +synonym: "IFNGR" EXACT [] +synonym: "interferon gamma receptor" EXACT [] +synonym: "interferon γ receptor" EXACT [] +synonym: "interferon-gamma receptor" EXACT [] +synonym: "interferon-γ receptor" EXACT [] +xref: BEL:"Interferon Gamma Receptor Complex" +xref: MEDSCAN:urn:agi-complex:IFNGR +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:5439 ! IFNGR1 +relationship: has_part HGNC:5440 ! IFNGR2 + +[Term] +id: FPLX:000264 +name: IRS +synonym: "insulin receptor substrate" EXACT [] +synonym: "IRS family" EXACT [] +synonym: "IRS" EXACT [] +xref: BEL:"IRS Family" +xref: MEDSCAN:urn:agi-aopfc:0000585 +xref: XFAM:PF02174 +xref: RE:R-HSA-2445131 +xref: RE:R-HSA-2445139 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:6125 ! IRS1 +relationship: inverse_is_a HGNC:6126 ! IRS2 +relationship: inverse_is_a HGNC:6128 ! IRS4 + +[Term] +id: FPLX:000265 +name: IRX +synonym: "homeodomain iroquois proteins" EXACT [] +synonym: "Iroquois family" EXACT [] +synonym: "Iroquois proteins" EXACT [] +synonym: "Iroquois-class homeodomain proteins" EXACT [] +xref: BEL:"IRX Family" +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:14358 ! IRX1 +relationship: inverse_is_a HGNC:14359 ! IRX2 +relationship: inverse_is_a HGNC:14360 ! IRX3 +relationship: inverse_is_a HGNC:6129 ! IRX4 +relationship: inverse_is_a HGNC:14361 ! IRX5 +relationship: inverse_is_a HGNC:14675 ! IRX6 +relationship: inverse_is_a HGNC:23729 ! MKX + +[Term] +id: FPLX:000266 +name: JAK +synonym: "JAK" EXACT [] +synonym: "Jak" EXACT [] +synonym: "JAKs" EXACT [] +xref: BEL:"JAK Family" +xref: IP:IPR016251 +xref: MEDSCAN:urn:agi-aopfc:0000464 +xref: NEXTPROT-FAMILY:03129 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:6190 ! JAK1 +relationship: inverse_is_a HGNC:6192 ! JAK2 +relationship: inverse_is_a HGNC:6193 ! JAK3 +relationship: inverse_is_a HGNC:12440 ! TYK2 + +[Term] +id: FPLX:000267 +name: JNK +synonym: "c-JNK" EXACT [] +synonym: "c-Jun N-terminal kinase" EXACT [] +synonym: "c-Jun NH2-terminal kinase" EXACT [] +synonym: "JNK MAPK" EXACT [] +synonym: "JNK" EXACT [] +synonym: "JNK1/2" EXACT [] +synonym: "JNKs" EXACT [] +xref: BEL:"MAPK JNK Family" +xref: IP:IPR008351 +xref: MEDSCAN:urn:agi-aopfc:0000473 +xref: RE:R-HSA-450226 +xref: RE:R-HSA-450253 +xref: RE:R-HSA-450289 +xref: SIGNOR:SIGNOR-PF15 +is_a: FPLX:000283 ! MAPK +relationship: inverse_is_a HGNC:6881 ! MAPK8 +relationship: inverse_is_a HGNC:6886 ! MAPK9 +relationship: inverse_is_a HGNC:6872 ! MAPK10 + +[Term] +id: FPLX:000268 +name: JUN-family +synonym: "JUN" EXACT [] +xref: IP:IPR002112 +xref: IP:IPR005643 +xref: MEDSCAN:urn:agi-complex:prophash-8d885376e30916afd0b47ccf1b044e75 +relationship: part_of FPLX:000048 ! AP1 +relationship: inverse_is_a HGNC:6204 ! JUN +relationship: inverse_is_a HGNC:6205 ! JUNB +relationship: inverse_is_a HGNC:6206 ! JUND + +[Term] +id: FPLX:000269 +name: Kainate-family +synonym: "Glutamate receptors, ionotropic, kainate" EXACT [] +synonym: "Kainate receptors" EXACT [] +synonym: "KARs" EXACT [] +xref: GFAM:1199 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:4579 ! GRIK1 +relationship: inverse_is_a HGNC:4580 ! GRIK2 +relationship: inverse_is_a HGNC:4581 ! GRIK3 +relationship: inverse_is_a HGNC:4582 ! GRIK4 +relationship: inverse_is_a HGNC:4583 ! GRIK5 + +[Term] +id: FPLX:000270 +name: Kinetochore +synonym: "kinetochore complex" EXACT [] +synonym: "kinetochore" EXACT [] +synonym: "kinetochores" EXACT [] +xref: BEL:"Kinetochore Complex" +xref: GO:0000776 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:1148 ! BUB1 +relationship: has_part HGNC:1149 ! BUB1B +relationship: has_part HGNC:1151 ! BUB3 +relationship: has_part HGNC:1854 ! CENPC +relationship: has_part HGNC:1856 ! CENPE +relationship: has_part HGNC:1857 ! CENPF +relationship: has_part HGNC:17268 ! CENPH +relationship: has_part HGNC:2712 ! DCTN2 +relationship: has_part HGNC:6391 ! KIF22 +relationship: has_part HGNC:6763 ! MAD2L1 +relationship: has_part HGNC:8574 ! PAFAH1B1 +relationship: has_part HGNC:9508 ! PSEN1 +relationship: has_part HGNC:9509 ! PSEN2 +relationship: has_part HGNC:11111 ! SMC1A +relationship: has_part HGNC:16987 ! SUGT1 +relationship: has_part HGNC:11124 ! SUMO3 +relationship: has_part HGNC:13194 ! ZW10 + +[Term] +id: FPLX:000271 +name: KLK +synonym: "kallikrein" EXACT [] +synonym: "kallikrein-related peptidases" EXACT [] +synonym: "KLKs" EXACT [] +synonym: "tissue kallikrein" EXACT [] +synonym: "tissue kallikreins" EXACT [] +xref: BEL:"KLK Family" +xref: ECCODE:3.4.21.35 +xref: MEDSCAN:urn:agi-protfc:kallikrein +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:6357 ! KLK1 +relationship: inverse_is_a HGNC:6358 ! KLK10 +relationship: inverse_is_a HGNC:6359 ! KLK11 +relationship: inverse_is_a HGNC:6360 ! KLK12 +relationship: inverse_is_a HGNC:6361 ! KLK13 +relationship: inverse_is_a HGNC:6362 ! KLK14 +relationship: inverse_is_a HGNC:20453 ! KLK15 +relationship: inverse_is_a HGNC:6363 ! KLK2 +relationship: inverse_is_a HGNC:6364 ! KLK3 +relationship: inverse_is_a HGNC:6365 ! KLK4 +relationship: inverse_is_a HGNC:6366 ! KLK5 +relationship: inverse_is_a HGNC:6367 ! KLK6 +relationship: inverse_is_a HGNC:6368 ! KLK7 +relationship: inverse_is_a HGNC:6369 ! KLK8 +relationship: inverse_is_a HGNC:6370 ! KLK9 +relationship: inverse_is_a HGNC:6371 ! KLKB1 + +[Term] +id: FPLX:000272 +name: KSR +synonym: "KSR" EXACT [] +xref: IP:IPR025561 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:6465 ! KSR1 +relationship: inverse_is_a HGNC:18610 ! KSR2 + +[Term] +id: FPLX:000273 +name: Laminin-111 +synonym: "LM-1" EXACT [] +xref: BEL:"Laminin 1 Complex" +xref: RE:R-HSA-215989 +xref: RE:R-HSA-2426371 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:6481 ! LAMA1 +relationship: has_part HGNC:6486 ! LAMB1 +relationship: has_part HGNC:6492 ! LAMC1 + +[Term] +id: FPLX:000274 +name: Laminin-332 +synonym: "laminin 332 chains" EXACT [] +synonym: "laminin 332" EXACT [] +synonym: "laminin-332 chains" EXACT [] +synonym: "laminin-332" EXACT [] +synonym: "Laminin-5" EXACT [] +synonym: "laminin-5" EXACT [] +xref: BEL:"Laminin 5 Complex" +xref: GO:0005610 +xref: RE:R-HSA-216001 +xref: RE:R-HSA-2220790 +xref: RE:R-HSA-2399659 +xref: RE:R-HSA-2533911 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:6483 ! LAMA3 +relationship: has_part HGNC:6490 ! LAMB3 +relationship: has_part HGNC:6493 ! LAMC2 + +[Term] +id: FPLX:000275 +name: LDH +synonym: "LDH" EXACT [] +xref: BEL:"LDH Family" +xref: NCIT:C25184 +xref: NEXTPROT-FAMILY:02022 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:6535 ! LDHA +relationship: inverse_is_a HGNC:6541 ! LDHB +relationship: inverse_is_a HGNC:6544 ! LDHC + +[Term] +id: FPLX:000276 +name: LH +synonym: "LH" EXACT [] +synonym: "Luteinizing hormone" EXACT [] +synonym: "luteinizing hormone" EXACT [] +synonym: "luteinizing-hormone" EXACT [] +xref: BEL:"Luteinizing Hormone Complex" +xref: MEDSCAN:urn:agi-complex:Luteinizing%20hormone +xref: RE:R-HSA-378969 +xref: RE:R-HSA-6793931 +xref: RE:R-HSA-6793934 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:1885 ! CGA +relationship: has_part HGNC:6584 ! LHB + +[Term] +id: FPLX:000277 +name: LPAR +xref: SIGNOR:SIGNOR-PF2 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:3166 ! LPAR1 +relationship: inverse_is_a HGNC:3168 ! LPAR2 +relationship: inverse_is_a HGNC:14298 ! LPAR3 + +[Term] +id: FPLX:000278 +name: MAC +synonym: "MAC" EXACT [] +synonym: "membrane attack complex" EXACT [] +synonym: "membrane attack" EXACT [] +xref: BEL:"Membrane Attack Complex" +xref: GO:0005579 +xref: RE:R-HSA-173728 +xref: RE:R-HSA-8852568 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:1331 ! C5 +relationship: has_part HGNC:1339 ! C6 +relationship: has_part HGNC:1346 ! C7 +relationship: has_part HGNC:1352 ! C8A +relationship: has_part HGNC:1353 ! C8B +relationship: has_part HGNC:1354 ! C8G +relationship: has_part HGNC:1358 ! C9 + +[Term] +id: FPLX:000279 +name: MAF +synonym: "Maf subfamily" EXACT [] +synonym: "MAF" EXACT [] +synonym: "Maf" EXACT [] +synonym: "maf" EXACT [] +xref: BEL:"MAF Family" +xref: IP:IPR004826 +xref: MEDSCAN:urn:agi-aopfc:0000142 +xref: XFAM:PF02545 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:6776 ! MAF +relationship: inverse_is_a HGNC:23145 ! MAFA +relationship: inverse_is_a HGNC:6408 ! MAFB +relationship: inverse_is_a HGNC:6780 ! MAFF +relationship: inverse_is_a HGNC:6781 ! MAFG +relationship: inverse_is_a HGNC:6782 ! MAFK + +[Term] +id: FPLX:000280 +name: MAP1LC3 +synonym: "LC3" EXACT [] +xref: IP:IPR004241 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:6838 ! MAP1LC3A +relationship: inverse_is_a HGNC:13352 ! MAP1LC3B +relationship: inverse_is_a HGNC:34390 ! MAP1LC3B2 +relationship: inverse_is_a HGNC:13353 ! MAP1LC3C + +[Term] +id: FPLX:000281 +name: MAP2K +synonym: "MAPK kinase" EXACT [] +synonym: "mitogen-activated protein kinase kinase" EXACT [] +xref: NCIT:C105947 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a FPLX:000286 ! MEK +relationship: inverse_is_a HGNC:6843 ! MAP2K3 +relationship: inverse_is_a HGNC:6844 ! MAP2K4 +relationship: inverse_is_a HGNC:6845 ! MAP2K5 +relationship: inverse_is_a HGNC:6846 ! MAP2K6 +relationship: inverse_is_a HGNC:6847 ! MAP2K7 + +[Term] +id: FPLX:000282 +name: MAP3K +synonym: "MAP3K" EXACT [] +synonym: "MAPK kinase kinase" EXACT [] +synonym: "MAPKK kinases" EXACT [] +synonym: "MAPKKK" EXACT [] +xref: ECCODE:2.7.11.25 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a FPLX:000399 ! RAF +relationship: inverse_is_a HGNC:6848 ! MAP3K1 +relationship: inverse_is_a HGNC:6854 ! MAP3K2 +relationship: inverse_is_a HGNC:6855 ! MAP3K3 +relationship: inverse_is_a HGNC:6856 ! MAP3K4 +relationship: inverse_is_a HGNC:6857 ! MAP3K5 +relationship: inverse_is_a HGNC:6858 ! MAP3K6 +relationship: inverse_is_a HGNC:6859 ! MAP3K7 +relationship: inverse_is_a HGNC:6860 ! MAP3K8 +relationship: inverse_is_a HGNC:6861 ! MAP3K9 +relationship: inverse_is_a HGNC:6849 ! MAP3K10 +relationship: inverse_is_a HGNC:6850 ! MAP3K11 +relationship: inverse_is_a HGNC:6851 ! MAP3K12 +relationship: inverse_is_a HGNC:6852 ! MAP3K13 +relationship: inverse_is_a HGNC:6853 ! MAP3K14 +relationship: inverse_is_a HGNC:31689 ! MAP3K15 +relationship: inverse_is_a FPLX:000458 ! TAOK +relationship: inverse_is_a HGNC:26249 ! MAP3K19 +relationship: inverse_is_a HGNC:17797 ! MAP3K20 +relationship: inverse_is_a HGNC:29798 ! MAP3K21 + +[Term] +id: FPLX:000283 +name: MAPK +synonym: "MAP kinase" EXACT [] +synonym: "MAP kinases" EXACT [] +synonym: "MAPKs" EXACT [] +synonym: "mitogen activated protein kinase" EXACT [] +synonym: "mitogen activated protein kinases" EXACT [] +synonym: "mitogen-activated protein kinase" EXACT [] +synonym: "mitogen-activated protein kinases" EXACT [] +xref: ECCODE:2.7.11.24 +xref: ECCODE:2.7.12.2 +xref: NCIT:C16376 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a FPLX:000161 ! ERK +relationship: inverse_is_a FPLX:000326 ! p38 +relationship: inverse_is_a FPLX:000267 ! JNK + +[Term] +id: FPLX:000284 +name: MCM +synonym: "MCM" EXACT [] +synonym: "mini-chromosome maintenance complex" EXACT [] +synonym: "minichromosome maintenance complex" EXACT [] +synonym: "minichromosome maintenance protein complex" EXACT [] +xref: GO:0042555 +xref: IP:IPR001208 +xref: IP:IPR031327 +xref: MEDSCAN:urn:agi-complex:prophash-e6be10f6a8e79aed1daa4ec2ac191db1 +xref: NEXTPROT-FAMILY:02187 +xref: XFAM:PF00493 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:6944 ! MCM2 +relationship: inverse_is_a HGNC:6945 ! MCM3 +relationship: inverse_is_a HGNC:6947 ! MCM4 +relationship: inverse_is_a HGNC:6948 ! MCM5 +relationship: inverse_is_a HGNC:6949 ! MCM6 +relationship: inverse_is_a HGNC:6950 ! MCM7 +relationship: inverse_is_a HGNC:16147 ! MCM8 +relationship: inverse_is_a HGNC:21484 ! MCM9 +relationship: inverse_is_a HGNC:26368 ! MCMDC2 + +[Term] +id: FPLX:000285 +name: MEF2 +synonym: "MEF2 family" EXACT [] +synonym: "MEF2" EXACT [] +xref: BEL:"MEF2 Family" +xref: IP:IPR033896 +xref: MEDSCAN:urn:agi-aopfc:0000143 +xref: RE:R-HSA-448866 +xref: RE:R-HSA-448868 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:6993 ! MEF2A +relationship: inverse_is_a HGNC:6996 ! MEF2C +relationship: inverse_is_a HGNC:6997 ! MEF2D +relationship: inverse_is_a HGNC:6995 ! MEF2B + +[Term] +id: FPLX:000286 +name: MEK +synonym: "MEK 1/2" EXACT [] +synonym: "MEK" EXACT [] +synonym: "MEK1/2" EXACT [] +xref: BEL:"MEK1/2 Family" +xref: MEDSCAN:urn:agi-aopfc:0000462 +xref: RE:R-HSA-5672686 +xref: RE:R-HSA-5672705 +xref: RE:R-HSA-5672716 +xref: RE:R-HSA-5672721 +xref: RE:R-HSA-5674489 +xref: SIGNOR:SIGNOR-PF25 +is_a: FPLX:000281 ! MAP2K +relationship: inverse_is_a HGNC:6840 ! MAP2K1 +relationship: inverse_is_a HGNC:6842 ! MAP2K2 + +[Term] +id: FPLX:000287 +name: MGAT +synonym: "MGAT" EXACT [] +is_a: FPLX:000198 ! Glycosyltransferase +relationship: inverse_is_a HGNC:7044 ! MGAT1 +relationship: inverse_is_a HGNC:7045 ! MGAT2 +relationship: inverse_is_a HGNC:7046 ! MGAT3 +relationship: inverse_is_a HGNC:7047 ! MGAT4A +relationship: inverse_is_a HGNC:7048 ! MGAT4B +relationship: inverse_is_a HGNC:30871 ! MGAT4C +relationship: inverse_is_a HGNC:43619 ! MGAT4D +relationship: inverse_is_a HGNC:7049 ! MGAT5 +relationship: inverse_is_a HGNC:24140 ! MGAT5B + +[Term] +id: FPLX:000288 +name: Mitochondrial-Ribosome +synonym: "mammalian mitochondrial ribosome" EXACT [] +synonym: "Mitochondrial ribosome" EXACT [] +synonym: "Mitochondrial Ribosome" EXACT [] +synonym: "mitochondrial ribosomes" EXACT [] +synonym: "Mitochondrial ribosomes" EXACT [] +synonym: "Mitochondrial Ribosomes" EXACT [] +synonym: "mitoribosome" EXACT [] +synonym: "Mitoribosome" EXACT [] +synonym: "55S mammalian mitochondrial ribosome" EXACT [] +synonym: "55S mitoribosome" EXACT [] +synonym: "55s mitoribosome" EXACT [] +synonym: "55S Mitoribosome" EXACT [] +synonym: "55s Mitoribosome" EXACT [] +xref: GO:0005761 +is_a: FPLX:000000 ! famplex +relationship: has_part FPLX:000289 ! MRPS +relationship: has_part FPLX:000290 ! MRPL + +[Term] +id: FPLX:000289 +name: MRPS +synonym: "small mitoribosomal subunit" EXACT [] +synonym: "Small Mitoribosomal Subunit" EXACT [] +synonym: "small subunit of the mammalian mitochondrial ribosome" EXACT [] +synonym: "mitochondrial ribosomal small subunit" EXACT [] +xref: GO:0005763 +relationship: part_of FPLX:000288 ! Mitochondrial_Ribosome +relationship: has_part HGNC:14495 ! MRPS2 +relationship: has_part HGNC:14498 ! MRPS5 +relationship: has_part HGNC:14051 ! MRPS6 +relationship: has_part HGNC:14499 ! MRPS7 +relationship: has_part HGNC:14501 ! MRPS9 +relationship: has_part HGNC:14502 ! MRPS10 +relationship: has_part HGNC:14050 ! MRPS11 +relationship: has_part HGNC:10380 ! MRPS12 +relationship: has_part HGNC:14049 ! MRPS14 +relationship: has_part HGNC:14504 ! MRPS15 +relationship: has_part HGNC:14048 ! MRPS16 +relationship: has_part HGNC:14047 ! MRPS17 +relationship: has_part HGNC:14515 ! MRPS18A +relationship: has_part HGNC:14516 ! MRPS18B +relationship: has_part HGNC:16633 ! MRPS18C +relationship: has_part HGNC:14046 ! MRPS21 +relationship: has_part HGNC:14508 ! MRPS22 +relationship: has_part HGNC:14509 ! MRPS23 +relationship: has_part HGNC:14510 ! MRPS24 +relationship: has_part HGNC:14511 ! MRPS25 +relationship: has_part HGNC:14045 ! MRPS26 +relationship: has_part HGNC:14512 ! MRPS27 +relationship: has_part HGNC:14513 ! MRPS28 +relationship: has_part HGNC:2673 ! DAP3 +relationship: has_part HGNC:8769 ! MRPS30 +relationship: has_part HGNC:16632 ! MRPS31 +relationship: has_part HGNC:16634 ! MRPS33 +relationship: has_part HGNC:16618 ! MRPS34 +relationship: has_part HGNC:16635 ! MRPS35 +relationship: has_part HGNC:16631 ! MRPS36 + +[Term] +id: FPLX:000290 +name: MRPL +synonym: "large mitoribosomal subunit" EXACT [] +synonym: "Large Mitoribosomal Subunit" EXACT [] +synonym: "large subunit of the mammalian mitochondrial ribosome" EXACT [] +synonym: "mitochondrial ribosomal large subunit" EXACT [] +xref: GO:0005762 +relationship: part_of FPLX:000288 ! Mitochondrial_Ribosome +relationship: has_part HGNC:14275 ! MRPL1 +relationship: has_part HGNC:14056 ! MRPL2 +relationship: has_part HGNC:10379 ! MRPL3 +relationship: has_part HGNC:14276 ! MRPL4 +relationship: has_part HGNC:14277 ! MRPL9 +relationship: has_part HGNC:14055 ! MRPL10 +relationship: has_part HGNC:14042 ! MRPL11 +relationship: has_part HGNC:10378 ! MRPL12 +relationship: has_part HGNC:14278 ! MRPL13 +relationship: has_part HGNC:14279 ! MRPL14 +relationship: has_part HGNC:14054 ! MRPL15 +relationship: has_part HGNC:14476 ! MRPL16 +relationship: has_part HGNC:14053 ! MRPL17 +relationship: has_part HGNC:14477 ! MRPL18 +relationship: has_part HGNC:14052 ! MRPL19 +relationship: has_part HGNC:14478 ! MRPL20 +relationship: has_part HGNC:14479 ! MRPL21 +relationship: has_part HGNC:14480 ! MRPL22 +relationship: has_part HGNC:10322 ! MRPL23 +relationship: has_part HGNC:14037 ! MRPL24 +relationship: has_part HGNC:14483 ! MRPL27 +relationship: has_part HGNC:14484 ! MRPL28 +relationship: has_part HGNC:14036 ! MRPL30 +relationship: has_part HGNC:14035 ! MRPL32 +relationship: has_part HGNC:14487 ! MRPL33 +relationship: has_part HGNC:14488 ! MRPL34 +relationship: has_part HGNC:14489 ! MRPL35 +relationship: has_part HGNC:14490 ! MRPL36 +relationship: has_part HGNC:14034 ! MRPL37 +relationship: has_part HGNC:14033 ! MRPL38 +relationship: has_part HGNC:14027 ! MRPL39 +relationship: has_part HGNC:14491 ! MRPL40 +relationship: has_part HGNC:14492 ! MRPL41 +relationship: has_part HGNC:14493 ! MRPL42 +relationship: has_part HGNC:14517 ! MRPL43 +relationship: has_part HGNC:16650 ! MRPL44 +relationship: has_part HGNC:16651 ! MRPL45 +relationship: has_part HGNC:1192 ! MRPL46 +relationship: has_part HGNC:16652 ! MRPL47 +relationship: has_part HGNC:16653 ! MRPL48 +relationship: has_part HGNC:1176 ! MRPL49 +relationship: has_part HGNC:16654 ! MRPL50 +relationship: has_part HGNC:14044 ! MRPL51 +relationship: has_part HGNC:16655 ! MRPL52 +relationship: has_part HGNC:16684 ! MRPL53 +relationship: has_part HGNC:16685 ! MRPL54 +relationship: has_part HGNC:16686 ! MRPL55 +relationship: has_part HGNC:14514 ! MRPL57 + +[Term] +id: FPLX:000291 +name: MMP +synonym: "MMP" EXACT [] +synonym: "MMPs" EXACT [] +xref: BEL:"MMP Family" +xref: NCIT:C18164 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:7155 ! MMP1 +relationship: inverse_is_a HGNC:7166 ! MMP2 +relationship: inverse_is_a HGNC:7173 ! MMP3 +relationship: inverse_is_a HGNC:7174 ! MMP7 +relationship: inverse_is_a HGNC:7175 ! MMP8 +relationship: inverse_is_a HGNC:7176 ! MMP9 +relationship: inverse_is_a HGNC:7156 ! MMP10 +relationship: inverse_is_a HGNC:7157 ! MMP11 +relationship: inverse_is_a HGNC:7158 ! MMP12 +relationship: inverse_is_a HGNC:7159 ! MMP13 +relationship: inverse_is_a HGNC:7160 ! MMP14 +relationship: inverse_is_a HGNC:7161 ! MMP15 +relationship: inverse_is_a HGNC:7162 ! MMP16 +relationship: inverse_is_a HGNC:7163 ! MMP17 +relationship: inverse_is_a HGNC:7165 ! MMP19 +relationship: inverse_is_a HGNC:7167 ! MMP20 +relationship: inverse_is_a HGNC:14357 ! MMP21 +relationship: inverse_is_a HGNC:7171 ! MMP23B +relationship: inverse_is_a HGNC:7172 ! MMP24 +relationship: inverse_is_a HGNC:14246 ! MMP25 +relationship: inverse_is_a HGNC:14249 ! MMP26 +relationship: inverse_is_a HGNC:14250 ! MMP27 +relationship: inverse_is_a HGNC:14366 ! MMP28 + +[Term] +id: FPLX:000292 +name: Metallothionein +synonym: "Metallothionein" EXACT [] +synonym: "metallothionein" EXACT [] +synonym: "MT" EXACT [] +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:7393 ! MT1A +relationship: inverse_is_a HGNC:7394 ! MT1B +relationship: inverse_is_a HGNC:7395 ! MT1CP +relationship: inverse_is_a HGNC:7396 ! MT1DP +relationship: inverse_is_a HGNC:7397 ! MT1E +relationship: inverse_is_a HGNC:7398 ! MT1F +relationship: inverse_is_a HGNC:7399 ! MT1G +relationship: inverse_is_a HGNC:7400 ! MT1H +relationship: inverse_is_a HGNC:31864 ! MT1HL1 +relationship: inverse_is_a HGNC:7401 ! MT1IP +relationship: inverse_is_a HGNC:7402 ! MT1JP +relationship: inverse_is_a HGNC:7404 ! MT1L +relationship: inverse_is_a HGNC:14296 ! MT1M +relationship: inverse_is_a HGNC:23681 ! MT1P1 +relationship: inverse_is_a HGNC:16120 ! MT1P3 +relationship: inverse_is_a HGNC:7405 ! MT1X +relationship: inverse_is_a HGNC:7406 ! MT2A +relationship: inverse_is_a HGNC:7408 ! MT3 +relationship: inverse_is_a HGNC:18705 ! MT4 + +[Term] +id: FPLX:000293 +name: mTORC1 +synonym: "mTORC1" EXACT [] +synonym: "TORC1" EXACT [] +xref: GO:0031931 +xref: MEDSCAN:urn:agi-complex:prophash-f472fef3f59301aee0b776702a30f03e +xref: NCIT:C96314 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:3942 ! MTOR +relationship: has_part HGNC:30287 ! RPTOR + +[Term] +id: FPLX:000294 +name: mTORC2 +synonym: "mTORC2" EXACT [] +synonym: "TORC2" EXACT [] +xref: BEL:"TORC2 Complex" +xref: MEDSCAN:urn:agi-complex:prophash-0d528c29d63997f87f62e4fbd9f0b168 +xref: NCIT:C96315 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:18752 ! MAPKAP1 +relationship: has_part HGNC:3942 ! MTOR +relationship: has_part HGNC:28611 ! RICTOR +relationship: has_part HGNC:24825 ! MLST8 + +[Term] +id: FPLX:000295 +name: MYH +synonym: "myosin heavy chain genes" EXACT [] +synonym: "myosin heavy chain isoforms" EXACT [] +synonym: "myosin heavy chain protein" EXACT [] +synonym: "Myosin heavy chain" EXACT [] +synonym: "myosin heavy chain" EXACT [] +synonym: "Myosin heavy chains" EXACT [] +synonym: "myosin heavy chains" EXACT [] +xref: BEL:"MYH Family" +xref: MEDSCAN:urn:agi-protfc:myosin%20heavy%20chain +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:7567 ! MYH1 +relationship: inverse_is_a HGNC:7568 ! MYH10 +relationship: inverse_is_a HGNC:7569 ! MYH11 +relationship: inverse_is_a HGNC:7571 ! MYH13 +relationship: inverse_is_a HGNC:23212 ! MYH14 +relationship: inverse_is_a HGNC:31073 ! MYH15 +relationship: inverse_is_a HGNC:7572 ! MYH2 +relationship: inverse_is_a HGNC:7573 ! MYH3 +relationship: inverse_is_a HGNC:7574 ! MYH4 +relationship: inverse_is_a HGNC:7576 ! MYH6 +relationship: inverse_is_a HGNC:7577 ! MYH7 +relationship: inverse_is_a HGNC:15906 ! MYH7B +relationship: inverse_is_a HGNC:7578 ! MYH8 +relationship: inverse_is_a HGNC:7579 ! MYH9 +relationship: inverse_is_a HGNC:7602 ! MYO5A + +[Term] +id: FPLX:000296 +name: MYL +synonym: "MLC" EXACT [] +synonym: "myosin light chain protein" EXACT [] +synonym: "myosin light chain" EXACT [] +synonym: "myosin light chains" EXACT [] +xref: BEL:"MYL Family" +xref: MEDSCAN:urn:agi-protfc:myosin%20light%20chain +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a FPLX:000297 ! MYL_alkali +relationship: inverse_is_a FPLX:000298 ! MYL_regulatory +relationship: inverse_is_a FPLX:000299 ! MYL_slow + +[Term] +id: FPLX:000297 +name: MYL-alkali +synonym: "alkali myosin light chains" EXACT [] +synonym: "AMLC" EXACT [] +synonym: "myosin alkali light chain proteins" EXACT [] +synonym: "myosin alkali light chain" EXACT [] +xref: BEL:"MYL Alkali Family" +is_a: FPLX:000296 ! MYL +relationship: inverse_is_a HGNC:7582 ! MYL1 +relationship: inverse_is_a HGNC:7584 ! MYL3 +relationship: inverse_is_a HGNC:7585 ! MYL4 +relationship: inverse_is_a HGNC:7587 ! MYL6 +relationship: inverse_is_a HGNC:29823 ! MYL6B + +[Term] +id: FPLX:000298 +name: MYL-regulatory +synonym: "regulatory myosin light chain" EXACT [] +xref: BEL:"MYL Regulatory Family" +is_a: FPLX:000296 ! MYL +relationship: inverse_is_a HGNC:29825 ! MYL10 +relationship: inverse_is_a HGNC:16701 ! MYL12A +relationship: inverse_is_a HGNC:29827 ! MYL12B +relationship: inverse_is_a HGNC:7583 ! MYL2 +relationship: inverse_is_a HGNC:7586 ! MYL5 +relationship: inverse_is_a HGNC:21719 ! MYL7 +relationship: inverse_is_a HGNC:15754 ! MYL9 +relationship: inverse_is_a HGNC:29824 ! MYLPF + +[Term] +id: FPLX:000299 +name: MYL-slow +synonym: "slow myosin" EXACT [] +xref: BEL:"MYL Slow Family" +is_a: FPLX:000296 ! MYL +relationship: inverse_is_a HGNC:7583 ! MYL2 +relationship: inverse_is_a HGNC:7584 ! MYL3 +relationship: inverse_is_a HGNC:29823 ! MYL6B + +[Term] +id: FPLX:000300 +name: MYST +synonym: "MYST family" EXACT [] +synonym: "MYST histone acetylase" EXACT [] +synonym: "MYST proteins" EXACT [] +xref: BEL:"MYST Family" +xref: IP:IPR002717 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:17933 ! KAT8 +relationship: inverse_is_a HGNC:17016 ! KAT7 +relationship: inverse_is_a HGNC:13013 ! KAT6A +relationship: inverse_is_a HGNC:17582 ! KAT6B +relationship: inverse_is_a HGNC:5275 ! KAT5 + +[Term] +id: FPLX:000301 +name: NADH-dehydrogenase +synonym: "NADH dehydrogenase (ubiquinone)" EXACT [] +synonym: "NADH dehydrogenase" EXACT [] +xref: BEL:"NADH Dehydrogenase Complex" +xref: ECCODE:1.6.5.3 +xref: XFAM:PF00146 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:7455 ! MT-ND1 +relationship: has_part HGNC:7456 ! MT-ND2 +relationship: has_part HGNC:7458 ! MT-ND3 +relationship: has_part HGNC:7459 ! MT-ND4 +relationship: has_part HGNC:7460 ! MT-ND4L +relationship: has_part HGNC:7461 ! MT-ND5 +relationship: has_part HGNC:7462 ! MT-ND6 + +[Term] +id: FPLX:000302 +name: NADPH-oxidase +synonym: "NAD(P)H oxidase" EXACT [] +synonym: "NAD(P)H-oxidase" EXACT [] +synonym: "NADPH oxidase" EXACT [] +xref: BEL:"NADPH Oxidase Complex" +xref: MEDSCAN:urn:agi-aopfc:0000479 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:2577 ! CYBA +relationship: has_part HGNC:2578 ! CYBB +relationship: has_part HGNC:3062 ! DUOX1 +relationship: has_part HGNC:13273 ! DUOX2 +relationship: has_part HGNC:7660 ! NCF1 +relationship: has_part HGNC:7661 ! NCF2 +relationship: has_part HGNC:7662 ! NCF4 +relationship: has_part HGNC:7889 ! NOX1 +relationship: has_part HGNC:7890 ! NOX3 +relationship: has_part HGNC:7891 ! NOX4 +relationship: has_part HGNC:14874 ! NOX5 +relationship: has_part HGNC:9801 ! RAC1 + +[Term] +id: FPLX:000303 +name: Na-K-ATPase +synonym: "Na(+),K(+)-ATPase" EXACT [] +synonym: "Na,K-ATPase" EXACT [] +synonym: "Na+/K+-exchanging ATPase" EXACT [] +synonym: "Na+/K+ATPase" EXACT [] +synonym: "Na/K-ATPase" EXACT [] +xref: BEL:"Na/K Exchanging ATPase Complex" +xref: ECCODE:3.6.3.9 +is_a: FPLX:000000 ! famplex +relationship: has_part FPLX:000057 ! ATP1A +relationship: has_part FPLX:000058 ! ATP1B + +[Term] +id: FPLX:000304 +name: Natriuretic-peptide +synonym: "Natriuretic Peptide" EXACT [] +synonym: "Natriuretic peptide" EXACT [] +synonym: "natriuretic peptide" EXACT [] +synonym: "Natriuretic Peptides" EXACT [] +synonym: "Natriuretic peptides" EXACT [] +synonym: "natriuretic peptides" EXACT [] +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:7939 ! NPPA +relationship: inverse_is_a HGNC:7940 ! NPPB +relationship: inverse_is_a HGNC:7941 ! NPPC + +[Term] +id: FPLX:000305 +name: NCOA +synonym: "p160/SRC" EXACT [] +xref: BEL:"p160/SRC Family" +xref: IP:IPR010011 +xref: IP:IPR014920 +xref: IP:IPR014935 +xref: IP:IPR017426 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:7668 ! NCOA1 +relationship: inverse_is_a HGNC:7669 ! NCOA2 +relationship: inverse_is_a HGNC:7670 ! NCOA3 + +[Term] +id: FPLX:000306 +name: NCOR +synonym: "Nuclear Receptor Co-Repressor" EXACT [] +synonym: "nuclear receptor co-repressor" EXACT [] +synonym: "Nuclear receptor corepressor" EXACT [] +synonym: "nuclear receptor corepressor" EXACT [] +xref: BEL:"NCOR Family" +xref: RE:R-HSA-349716 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:7672 ! NCOR1 +relationship: inverse_is_a HGNC:7673 ! NCOR2 + +[Term] +id: FPLX:000307 +name: NDRG +synonym: "N-myc downstream regulated gene family" EXACT [] +synonym: "NDR family" EXACT [] +synonym: "NDR-family" EXACT [] +xref: BEL:"NDRG Family" +xref: IP:IPR004142 +xref: XFAM:PF03096 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:7679 ! NDRG1 +relationship: inverse_is_a HGNC:14460 ! NDRG2 +relationship: inverse_is_a HGNC:14462 ! NDRG3 +relationship: inverse_is_a HGNC:14466 ! NDRG4 + +[Term] +id: FPLX:000308 +name: Neurexins +synonym: "Neurexins" EXACT [] +synonym: "NRXN" EXACT [] +xref: GFAM:1582 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:8008 ! NRXN1 +relationship: inverse_is_a HGNC:8009 ! NRXN2 +relationship: inverse_is_a HGNC:8010 ! NRXN3 + +[Term] +id: FPLX:000309 +name: NFAT +synonym: "NFAT" EXACT [] +xref: BEL:"NFAT Family" +xref: IP:IPR008366 +xref: NCIT:C17903 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:7775 ! NFATC1 +relationship: inverse_is_a HGNC:7776 ! NFATC2 +relationship: inverse_is_a HGNC:7777 ! NFATC3 +relationship: inverse_is_a HGNC:7778 ! NFATC4 +relationship: inverse_is_a HGNC:7774 ! NFAT5 + +[Term] +id: FPLX:000310 +name: NFE +synonym: "NF-E2" EXACT [] +synonym: "NF-E2-related factor" EXACT [] +synonym: "Nuclear factor erythroid 2-related factor" EXACT [] +xref: MEDSCAN:urn:agi-aopfc:0000150 +xref: MEDSCAN:urn:agi-complex:NF-E2 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:7781 ! NFE2L1 +relationship: inverse_is_a HGNC:7782 ! NFE2L2 +relationship: inverse_is_a HGNC:7783 ! NFE2L3 + +[Term] +id: FPLX:000311 +name: NFkappaB +synonym: "NF-kappaB complexes" EXACT [] +synonym: "NF-kappaB dimers" EXACT [] +synonym: "NF-kappaB Factors" EXACT [] +synonym: "NF-kappaB factors" EXACT [] +synonym: "NF-kappaB genes" EXACT [] +synonym: "NF-kappaB subunits" EXACT [] +synonym: "NF-kappaB TFs" EXACT [] +synonym: "NF-kappaB" EXACT [] +synonym: "NF-kappabeta" EXACT [] +synonym: "NF-kappaBs" EXACT [] +synonym: "NF-kB" EXACT [] +synonym: "NF-κB complexes" EXACT [] +synonym: "NF-κB dimers" EXACT [] +synonym: "NF-κB Factors" EXACT [] +synonym: "NF-κB factors" EXACT [] +synonym: "NF-κB genes" EXACT [] +synonym: "NF-κB subunits" EXACT [] +synonym: "NF-κB TFs" EXACT [] +synonym: "NF-κB" EXACT [] +synonym: "NF-κBs" EXACT [] +synonym: "NF-κβ" EXACT [] +synonym: "NFkappaB complexes" EXACT [] +synonym: "NFkappaB" EXACT [] +synonym: "NFκB complexes" EXACT [] +synonym: "NFκB" EXACT [] +xref: BEL:"Nfkb Complex" +xref: IP:IPR000451 +xref: IP:IPR030492 +xref: IP:IPR033926 +xref: MEDSCAN:urn:agi-aopfc:0000156 +xref: MEDSCAN:urn:agi-complex:prophash-8cfce9bfac3857e6f068d517deadfeaa +xref: NCIT:C17380 +xref: SIGNOR:SIGNOR-PF12 +is_a: FPLX:000000 ! famplex +relationship: has_part FPLX:000312 ! NFkappaB_1 +relationship: has_part FPLX:000313 ! NFkappaB_2 + +[Term] +id: FPLX:000312 +name: NFkappaB-1 +synonym: "Class 1 NF-kappaBs" EXACT [] +synonym: "class 1 NF-kappaBs" EXACT [] +synonym: "Class 1 NF-κBs" EXACT [] +synonym: "class 1 NF-κBs" EXACT [] +synonym: "Class I NF-kappaBs" EXACT [] +synonym: "class I NF-kappaBs" EXACT [] +synonym: "Class I NF-κBs" EXACT [] +synonym: "class I NF-κBs" EXACT [] +synonym: "NF-kappaB Class 1" EXACT [] +synonym: "NF-kappaB class 1" EXACT [] +synonym: "NF-kappaB Class I" EXACT [] +synonym: "NF-kappaB class I" EXACT [] +synonym: "NF-κB Class 1" EXACT [] +synonym: "NF-κB class 1" EXACT [] +synonym: "NF-κB Class I" EXACT [] +synonym: "NF-κB class I" EXACT [] +xref: RE:R-HSA-177656 +xref: RE:R-HSA-177662 +relationship: part_of FPLX:000311 ! NFkappaB +relationship: inverse_is_a HGNC:7794 ! NFKB1 +relationship: inverse_is_a HGNC:7795 ! NFKB2 + +[Term] +id: FPLX:000313 +name: NFkappaB-2 +synonym: "Class 2 NF-kappaBs" EXACT [] +synonym: "class 2 NF-kappaBs" EXACT [] +synonym: "Class 2 NF-κBs" EXACT [] +synonym: "class 2 NF-κBs" EXACT [] +synonym: "Class II NF-kappaBs" EXACT [] +synonym: "class II NF-kappaBs" EXACT [] +synonym: "Class II NF-κBs" EXACT [] +synonym: "class II NF-κBs" EXACT [] +synonym: "NF-kappaB Class 2" EXACT [] +synonym: "NF-kappaB class 2" EXACT [] +synonym: "NF-kappaB Class II" EXACT [] +synonym: "NF-kappaB class II" EXACT [] +synonym: "NF-κB Class 2" EXACT [] +synonym: "NF-κB class 2" EXACT [] +synonym: "NF-κB Class II" EXACT [] +synonym: "NF-κB class II" EXACT [] +relationship: part_of FPLX:000311 ! NFkappaB +relationship: inverse_is_a HGNC:9955 ! RELA +relationship: inverse_is_a HGNC:9956 ! RELB +relationship: inverse_is_a HGNC:9954 ! REL + +[Term] +id: FPLX:000314 +name: NFY +synonym: "NF-Y" EXACT [] +synonym: "NFY" EXACT [] +synonym: "nuclear factor Y" EXACT [] +synonym: "nuclear factor-Y" EXACT [] +xref: BEL:"Nfy Complex" +xref: RE:R-HSA-2426131 +xref: RE:R-HSA-381204 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:7804 ! NFYA +relationship: has_part HGNC:7805 ! NFYB +relationship: has_part HGNC:7806 ! NFYC + +[Term] +id: FPLX:000315 +name: NKD +synonym: "naked cuticle" EXACT [] +xref: BEL:"NKD Family" +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:17045 ! NKD1 +relationship: inverse_is_a HGNC:17046 ! NKD2 + +[Term] +id: FPLX:000316 +name: NOS +synonym: "NOS" EXACT [] +xref: BEL:"NOS Family" +xref: IP:IPR004030 +xref: IP:IPR012144 +xref: MEDSCAN:urn:agi-aopfc:0000494 +xref: NEXTPROT-FAMILY:02504 +xref: RE:R-HSA-419294 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:7872 ! NOS1 +relationship: inverse_is_a HGNC:7873 ! NOS2 +relationship: inverse_is_a HGNC:7876 ! NOS3 + +[Term] +id: FPLX:000317 +name: Notch +synonym: "Notch" EXACT [] +xref: BEL:"NOTCH Family" +xref: IP:IPR008297 +xref: IP:IPR010660 +xref: IP:IPR011656 +xref: MEDSCAN:urn:agi-aopfc:0000279 +xref: NEXTPROT-FAMILY:02506 +xref: XFAM:PF00066 +xref: RE:R-HSA-1911440 +xref: RE:R-HSA-1911472 +xref: RE:R-HSA-1911474 +xref: RE:R-HSA-1911547 +xref: RE:R-HSA-1911550 +xref: RE:R-HSA-212420 +xref: SIGNOR:SIGNOR-PF30 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:7881 ! NOTCH1 +relationship: inverse_is_a HGNC:7882 ! NOTCH2 +relationship: inverse_is_a HGNC:7883 ! NOTCH3 +relationship: inverse_is_a HGNC:7884 ! NOTCH4 + +[Term] +id: FPLX:000318 +name: NRG +synonym: "neuregulin family" EXACT [] +synonym: "Neuregulin" EXACT [] +synonym: "neuregulin" EXACT [] +synonym: "Neuregulins" EXACT [] +synonym: "neuregulins" EXACT [] +synonym: "NRGs" EXACT [] +xref: MEDSCAN:urn:agi-protfc:neuregulin%20family +xref: XFAM:PF02158 +xref: RE:R-HSA-1227957 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a FPLX:000319 ! NRG_1_2 +relationship: inverse_is_a FPLX:000320 ! NRG_3_4 + +[Term] +id: FPLX:000319 +name: NRG-1-2 +synonym: "NRG1-NRG2" EXACT [] +synonym: "NRG1/2" EXACT [] +xref: BEL:"NRG1/2 Family" +xref: RE:R-HSA-1227956 +xref: RE:R-HSA-1247495 +xref: RE:R-HSA-1248743 +is_a: FPLX:000318 ! NRG +relationship: inverse_is_a HGNC:7997 ! NRG1 +relationship: inverse_is_a HGNC:7998 ! NRG2 + +[Term] +id: FPLX:000320 +name: NRG-3-4 +synonym: "NRG3-NRG4" EXACT [] +synonym: "NRG3/4" EXACT [] +xref: BEL:"NRG3/4 Family" +is_a: FPLX:000318 ! NRG +relationship: inverse_is_a HGNC:7999 ! NRG3 +relationship: inverse_is_a HGNC:29862 ! NRG4 + +[Term] +id: FPLX:000321 +name: NTRK +synonym: "NTRK" EXACT [] +synonym: "NTRKs" EXACT [] +synonym: "Trk receptor" EXACT [] +synonym: "trk receptor" EXACT [] +synonym: "Trk receptors" EXACT [] +synonym: "trk receptors" EXACT [] +xref: BEL:"NTRK Family" +xref: IP:IPR020777 +xref: IP:IPR031635 +xref: MEDSCAN:urn:agi-aopfc:0000278 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:8031 ! NTRK1 +relationship: inverse_is_a HGNC:8032 ! NTRK2 +relationship: inverse_is_a HGNC:8033 ! NTRK3 + +[Term] +id: FPLX:000322 +name: OGT-family +is_a: FPLX:000198 ! Glycosyltransferase +relationship: inverse_is_a HGNC:28526 ! EOGT +relationship: inverse_is_a HGNC:8127 ! OGT +relationship: inverse_is_a HGNC:19139 ! POMGNT1 +relationship: inverse_is_a HGNC:25902 ! POMGNT2 + +[Term] +id: FPLX:000323 +name: p14-3-3 +synonym: "14-3-3 proteins" EXACT [] +synonym: "14-3-3" EXACT [] +xref: BEL:"14-3-3 Family" +xref: IP:IPR000308 +xref: IP:IPR023409 +xref: IP:IPR023410 +xref: MEDSCAN:urn:agi-protfc:14-3-3 +xref: XFAM:PF00244 +xref: RE:R-HSA-1445138 +xref: RE:R-HSA-2457842 +xref: SIGNOR:SIGNOR-PF7 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:10773 ! SFN +relationship: inverse_is_a HGNC:12849 ! YWHAB +relationship: inverse_is_a HGNC:12851 ! YWHAE +relationship: inverse_is_a HGNC:12852 ! YWHAG +relationship: inverse_is_a HGNC:12853 ! YWHAH +relationship: inverse_is_a HGNC:12854 ! YWHAQ +relationship: inverse_is_a HGNC:12855 ! YWHAZ + +[Term] +id: FPLX:000324 +name: P2RX +synonym: "P2X purinoreceptor" EXACT [] +synonym: "P2X purinoreceptors" EXACT [] +synonym: "P2X receptor" EXACT [] +synonym: "P2X receptors" EXACT [] +synonym: "P2X" EXACT [] +xref: BEL:"P2RX Family" +xref: GO:0004931 +xref: IP:IPR001429 +xref: IP:IPR027309 +xref: NEXTPROT-FAMILY:02630 +xref: XFAM:PF00864 +xref: RE:R-HSA-139848 +xref: RE:R-HSA-8861873 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:8533 ! P2RX1 +relationship: inverse_is_a HGNC:15459 ! P2RX2 +relationship: inverse_is_a HGNC:8534 ! P2RX3 +relationship: inverse_is_a HGNC:8535 ! P2RX4 +relationship: inverse_is_a HGNC:8536 ! P2RX5 +relationship: inverse_is_a HGNC:8538 ! P2RX6 +relationship: inverse_is_a HGNC:8537 ! P2RX7 + +[Term] +id: FPLX:000325 +name: P2RY +synonym: "P2Y receptor" EXACT [] +xref: BEL:"P2RY Family" +xref: MEDSCAN:urn:agi-protfc:p2y%20receptor +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:8539 ! P2RY1 +relationship: inverse_is_a HGNC:8541 ! P2RY2 +relationship: inverse_is_a HGNC:8542 ! P2RY4 +relationship: inverse_is_a HGNC:8543 ! P2RY6 +relationship: inverse_is_a HGNC:15524 ! P2RY8 +relationship: inverse_is_a HGNC:19906 ! P2RY10 +relationship: inverse_is_a HGNC:8540 ! P2RY11 +relationship: inverse_is_a HGNC:18124 ! P2RY12 +relationship: inverse_is_a HGNC:4537 ! P2RY13 +relationship: inverse_is_a HGNC:16442 ! P2RY14 +relationship: inverse_is_a HGNC:4478 ! LPAR4 +relationship: inverse_is_a HGNC:15520 ! LPAR6 + +[Term] +id: FPLX:000326 +name: p38 +synonym: "MAPK p38" EXACT [] +synonym: "P38 MAPK" EXACT [] +synonym: "p38 MAPK" EXACT [] +synonym: "p38 MAPKs" EXACT [] +synonym: "p38" EXACT [] +synonym: "p38-MAPK" EXACT [] +synonym: "p38MAPK" EXACT [] +xref: BEL:"MAPK p38 Family" +xref: IP:IPR008352 +xref: MEDSCAN:urn:agi-aopfc:0000477 +xref: RE:R-HSA-1250100 +xref: RE:R-HSA-1250102 +xref: RE:R-HSA-171016 +xref: RE:R-HSA-189828 +xref: SIGNOR:SIGNOR-PF16 +is_a: FPLX:000283 ! MAPK +relationship: inverse_is_a HGNC:6873 ! MAPK11 +relationship: inverse_is_a HGNC:6874 ! MAPK12 +relationship: inverse_is_a HGNC:6875 ! MAPK13 +relationship: inverse_is_a HGNC:6876 ! MAPK14 + +[Term] +id: FPLX:000327 +name: p53-family +synonym: "P53 family" EXACT [] +synonym: "p53 Family" EXACT [] +synonym: "p53 family" EXACT [] +synonym: "p53/p63/p73 family" EXACT [] +xref: IP:IPR002117 +xref: IP:IPR010991 +xref: IP:IPR011615 +xref: NEXTPROT-FAMILY:02632 +xref: XFAM:PF00870 +xref: RE:R-HSA-6798076 +xref: RE:R-HSA-6798078 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:11998 ! TP53 +relationship: inverse_is_a HGNC:15979 ! TP63 +relationship: inverse_is_a HGNC:12003 ! TP73 + +[Term] +id: FPLX:000328 +name: P70S6K +synonym: "p70 S6 kinase" EXACT [] +synonym: "P70RSK" EXACT [] +synonym: "p70RSK" EXACT [] +synonym: "P70S6K" EXACT [] +synonym: "S6K" EXACT [] +xref: BEL:"RPS6KB Family" +xref: MEDSCAN:urn:agi-protfc:p70rsk +is_a: FPLX:000422 ! RSK +relationship: inverse_is_a HGNC:10436 ! RPS6KB1 +relationship: inverse_is_a HGNC:10437 ! RPS6KB2 + +[Term] +id: FPLX:000329 +name: P90RSK +synonym: "p90RSK" EXACT [] +synonym: "RPS6KA" EXACT [] +xref: BEL:"RPS6KA Family" +xref: IP:IPR016239 +xref: MEDSCAN:urn:agi-protfc:p90rsk +xref: RE:R-HSA-446849 +xref: SIGNOR:SIGNOR-PF26 +is_a: FPLX:000422 ! RSK +relationship: inverse_is_a HGNC:10430 ! RPS6KA1 +relationship: inverse_is_a HGNC:10431 ! RPS6KA2 +relationship: inverse_is_a HGNC:10432 ! RPS6KA3 +relationship: inverse_is_a HGNC:10433 ! RPS6KA4 +relationship: inverse_is_a HGNC:10434 ! RPS6KA5 +relationship: inverse_is_a HGNC:10435 ! RPS6KA6 + +[Term] +id: FPLX:000330 +name: PAK +synonym: "PAK" EXACT [] +synonym: "Pak" EXACT [] +xref: BEL:"PAK Family" +xref: IP:IPR033923 +xref: MEDSCAN:urn:agi-aopfc:0000468 +xref: RE:R-HSA-428475 +xref: SIGNOR:SIGNOR-PF13 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:8590 ! PAK1 +relationship: inverse_is_a HGNC:8591 ! PAK2 +relationship: inverse_is_a HGNC:8592 ! PAK3 +relationship: inverse_is_a HGNC:16059 ! PAK4 +relationship: inverse_is_a HGNC:15916 ! PAK5 +relationship: inverse_is_a HGNC:16061 ! PAK6 + +[Term] +id: FPLX:000331 +name: PARP +synonym: "PARP genes" EXACT [] +synonym: "PARPs" EXACT [] +synonym: "Poly(ADP-ribose) polymerase" EXACT [] +synonym: "Poly(ADP-ribose) polymerases" EXACT [] +xref: XFAM:PF00644 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:270 ! PARP1 +relationship: inverse_is_a HGNC:272 ! PARP2 +relationship: inverse_is_a HGNC:273 ! PARP3 +relationship: inverse_is_a HGNC:271 ! PARP4 +relationship: inverse_is_a HGNC:26921 ! PARP6 +relationship: inverse_is_a HGNC:26124 ! PARP8 +relationship: inverse_is_a HGNC:24118 ! PARP9 +relationship: inverse_is_a HGNC:25895 ! PARP10 +relationship: inverse_is_a HGNC:1186 ! PARP11 +relationship: inverse_is_a HGNC:21919 ! PARP12 +relationship: inverse_is_a HGNC:29232 ! PARP14 +relationship: inverse_is_a HGNC:26876 ! PARP15 +relationship: inverse_is_a HGNC:26040 ! PARP16 +relationship: inverse_is_a HGNC:11941 ! TNKS +relationship: inverse_is_a HGNC:15677 ! TNKS2 +relationship: inverse_is_a HGNC:23696 ! TIPARP + +[Term] +id: FPLX:000332 +name: PARV +synonym: "Parvin" EXACT [] +synonym: "parvin" EXACT [] +synonym: "Parvins" EXACT [] +synonym: "parvins" EXACT [] +xref: BEL:"PARV Family" +xref: IP:IPR028433 +xref: NEXTPROT-FAMILY:02660 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:14652 ! PARVA +relationship: inverse_is_a HGNC:14653 ! PARVB +relationship: inverse_is_a HGNC:14654 ! PARVG + +[Term] +id: FPLX:000333 +name: Patched +synonym: "PATCHED" EXACT [] +synonym: "Patched" EXACT [] +xref: IP:IPR004766 +xref: MEDSCAN:urn:agi-aopfc:0000281 +xref: XFAM:PF02460 +xref: RE:R-HSA-445134 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:9585 ! PTCH1 +relationship: inverse_is_a HGNC:9586 ! PTCH2 + +[Term] +id: FPLX:000334 +name: PBX +synonym: "PBX" EXACT [] +synonym: "Pbx" EXACT [] +synonym: "pbx" EXACT [] +synonym: "PBXs" EXACT [] +xref: BEL:"PBX Family" +xref: IP:IPR005542 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:8632 ! PBX1 +relationship: inverse_is_a HGNC:8633 ! PBX2 +relationship: inverse_is_a HGNC:8634 ! PBX3 +relationship: inverse_is_a HGNC:13403 ! PBX4 + +[Term] +id: FPLX:000335 +name: PDE +synonym: "PDE" EXACT [] +synonym: "PDEs" EXACT [] +synonym: "Phosphodiesterase" EXACT [] +synonym: "phosphodiesterase" EXACT [] +synonym: "Phosphodiesterases" EXACT [] +synonym: "phosphodiesterases" EXACT [] +xref: BEL:"PDE Family" +xref: ECCODE:3.1.4.- +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:8777 ! PDE2A +relationship: inverse_is_a HGNC:8795 ! PDE9A +relationship: inverse_is_a HGNC:8772 ! PDE10A +relationship: inverse_is_a HGNC:8773 ! PDE11A +relationship: inverse_is_a FPLX:000336 ! PDE1 +relationship: inverse_is_a FPLX:000337 ! PDE3 +relationship: inverse_is_a FPLX:000338 ! PDE4 +relationship: inverse_is_a FPLX:000339 ! PDE6 +relationship: inverse_is_a FPLX:000340 ! PDE7 +relationship: inverse_is_a FPLX:000341 ! PDE8 + +[Term] +id: FPLX:000336 +name: PDE1 +synonym: "PDE1 family" EXACT [] +synonym: "PDE1" EXACT [] +synonym: "Phosphodiesterase 1" EXACT [] +synonym: "phosphodiesterase 1" EXACT [] +synonym: "Phosphodiesterase-1" EXACT [] +synonym: "phosphodiesterase-1" EXACT [] +xref: BEL:"PDE1 Family" +xref: GO:0004117 +xref: IP:IPR013706 +xref: RE:R-HSA-111952 +xref: RE:R-HSA-111953 +is_a: FPLX:000335 ! PDE +relationship: inverse_is_a HGNC:8774 ! PDE1A +relationship: inverse_is_a HGNC:8775 ! PDE1B +relationship: inverse_is_a HGNC:8776 ! PDE1C + +[Term] +id: FPLX:000337 +name: PDE3 +synonym: "PDE 3" EXACT [] +synonym: "PDE3 family" EXACT [] +synonym: "PDE3" EXACT [] +synonym: "Phosphodiesterase 3" EXACT [] +synonym: "phosphodiesterase 3" EXACT [] +synonym: "Phosphodiesterase-3" EXACT [] +synonym: "phosphodiesterase-3" EXACT [] +xref: BEL:"PDE3 Family" +xref: MEDSCAN:urn:agi-protfc:phosphodiesterase%20III +xref: NEXTPROT-FAMILY:00803 +is_a: FPLX:000335 ! PDE +relationship: inverse_is_a HGNC:8778 ! PDE3A +relationship: inverse_is_a HGNC:8779 ! PDE3B + +[Term] +id: FPLX:000338 +name: PDE4 +synonym: "PDE4 family" EXACT [] +synonym: "PDE4 isoforms" EXACT [] +synonym: "PDE4" EXACT [] +synonym: "Phosphodiesterase 4" EXACT [] +synonym: "phosphodiesterase 4" EXACT [] +synonym: "Phosphodiesterase-4" EXACT [] +synonym: "phosphodiesterase-4" EXACT [] +synonym: "type 4 cyclic nucleotide phosphodiesterase" EXACT [] +xref: BEL:"PDE4 Family" +xref: MEDSCAN:urn:agi-protfc:PDE4%20subfamily +xref: NCIT:C107433 +xref: NEXTPROT-FAMILY:00804 +xref: RE:R-HSA-111960 +is_a: FPLX:000335 ! PDE +relationship: inverse_is_a HGNC:8780 ! PDE4A +relationship: inverse_is_a HGNC:8781 ! PDE4B +relationship: inverse_is_a HGNC:8782 ! PDE4C +relationship: inverse_is_a HGNC:8783 ! PDE4D + +[Term] +id: FPLX:000339 +name: PDE6 +synonym: "PDE6 family" EXACT [] +synonym: "PDE6" EXACT [] +synonym: "Phosphodiesterase 6" EXACT [] +synonym: "phosphodiesterase 6" EXACT [] +synonym: "Phosphodiesterase-6" EXACT [] +synonym: "phosphodiesterase-6" EXACT [] +xref: BEL:"PDE6 Family" +xref: MEDSCAN:urn:agi-aopfc:0000704 +is_a: FPLX:000335 ! PDE +relationship: inverse_is_a HGNC:8785 ! PDE6A +relationship: inverse_is_a HGNC:8786 ! PDE6B +relationship: inverse_is_a HGNC:8787 ! PDE6C + +[Term] +id: FPLX:000340 +name: PDE7 +synonym: "PDE7" EXACT [] +synonym: "Phosphodiesterase 7" EXACT [] +synonym: "phosphodiesterase 7" EXACT [] +synonym: "Phosphodiesterase-7" EXACT [] +synonym: "phosphodiesterase-7" EXACT [] +xref: RE:R-HSA-418540 +is_a: FPLX:000335 ! PDE +relationship: inverse_is_a HGNC:8791 ! PDE7A +relationship: inverse_is_a HGNC:8792 ! PDE7B + +[Term] +id: FPLX:000341 +name: PDE8 +synonym: "PDE8" EXACT [] +synonym: "Phosphodiesterase 8" EXACT [] +synonym: "phosphodiesterase 8" EXACT [] +synonym: "Phosphodiesterase-8" EXACT [] +synonym: "phosphodiesterase-8" EXACT [] +xref: RE:R-HSA-418541 +is_a: FPLX:000335 ! PDE +relationship: inverse_is_a HGNC:8793 ! PDE8A +relationship: inverse_is_a HGNC:8794 ! PDE8B + +[Term] +id: FPLX:000342 +name: PDGF +synonym: "PDGF" EXACT [] +xref: BEL:"PDGF Family" +xref: GO:0005161 +xref: NCIT:C20448 +xref: RE:R-HSA-381926 +xref: RE:R-HSA-381936 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:8799 ! PDGFA +relationship: inverse_is_a HGNC:8800 ! PDGFB +relationship: inverse_is_a HGNC:8801 ! PDGFC +relationship: inverse_is_a HGNC:30620 ! PDGFD + +[Term] +id: FPLX:000343 +name: PDGFR +synonym: "PDGFR" EXACT [] +xref: BEL:"PDGFR Family" +xref: NCIT:C17322 +xref: RE:R-HSA-186769 +xref: RE:R-HSA-186770 +xref: RE:R-HSA-186791 +xref: RE:R-HSA-186792 +xref: RE:R-HSA-186821 +xref: RE:R-HSA-8864040 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:8803 ! PDGFRA +relationship: inverse_is_a HGNC:8804 ! PDGFRB + +[Term] +id: FPLX:000344 +name: PDGFR-AA +synonym: "PDGFR-AA" EXACT [] +synonym: "PDGFR-alphaalpha" EXACT [] +synonym: "PDGFR-αα" EXACT [] +synonym: "PDGFRalphaalpha" EXACT [] +synonym: "PDGFRαα" EXACT [] +xref: IP:IPR027290 +xref: RE:R-HSA-186816 +xref: RE:R-HSA-186817 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:8803 ! PDGFRA + +[Term] +id: FPLX:000345 +name: PDGFR-AB +synonym: "PDGFR-AB" EXACT [] +synonym: "PDGFR-alphabeta" EXACT [] +synonym: "PDGFR-αβ" EXACT [] +synonym: "PDGFRalphabeta" EXACT [] +synonym: "PDGFRαβ" EXACT [] +xref: RE:R-HSA-186769 +xref: RE:R-HSA-186770 +xref: RE:R-HSA-186791 +xref: RE:R-HSA-186792 +xref: RE:R-HSA-186821 +xref: RE:R-HSA-8864040 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:8803 ! PDGFRA +relationship: has_part HGNC:8804 ! PDGFRB + +[Term] +id: FPLX:000346 +name: PDGFR-BB +synonym: "PDGFR-BB" EXACT [] +synonym: "PDGFR-betabeta" EXACT [] +synonym: "PDGFR-ββ" EXACT [] +synonym: "PDGFRbetabeta" EXACT [] +synonym: "PDGFRββ" EXACT [] +xref: IP:IPR027288 +xref: RE:R-HSA-186799 +xref: RE:R-HSA-186805 +xref: RE:R-HSA-8864046 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:8804 ! PDGFRB + +[Term] +id: FPLX:000347 +name: PDGF-AA +synonym: "PDGF-AA" EXACT [] +synonym: "PDGF-aa" EXACT [] +synonym: "PDGFAA" EXACT [] +xref: MEDSCAN:urn:agi-complex:platelet%20derived%20growth%20factor%20AA +xref: RE:R-HSA-184203 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:8799 ! PDGFA + +[Term] +id: FPLX:000348 +name: PDGF-AB +synonym: "PDGF-AB" EXACT [] +synonym: "PDGF-ab" EXACT [] +synonym: "PDGFAB" EXACT [] +xref: MEDSCAN:urn:agi-complex:platelet%20derived%20growth%20factor%20AB +xref: RE:R-HSA-380759 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:8799 ! PDGFA +relationship: has_part HGNC:8800 ! PDGFB + +[Term] +id: FPLX:000349 +name: PDGF-BB +synonym: "PDGF-BB" EXACT [] +synonym: "PDGF-bb" EXACT [] +synonym: "PDGFBB" EXACT [] +xref: IP:IPR015583 +xref: MEDSCAN:urn:agi-complex:platelet%20derived%20growth%20factor%20BB +xref: MESH:C072194 +xref: RE:R-HSA-184196 +xref: RE:R-HSA-184198 +xref: RE:R-HSA-184204 +xref: RE:R-HSA-184206 +xref: RE:R-HSA-2426276 +xref: RE:R-HSA-380748 +xref: RE:R-HSA-380751 +xref: RE:R-HSA-380759 +xref: RE:R-HSA-381935 +xref: RE:R-HSA-381938 +xref: RE:R-HSA-387074 +xref: RE:R-HSA-392712 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:8800 ! PDGFB + +[Term] +id: FPLX:000350 +name: PDGF-CC +synonym: "PDGF CC" EXACT [] +synonym: "PDGF-CC" EXACT [] +synonym: "PDGF-cc" EXACT [] +xref: RE:R-HSA-381941 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:8801 ! PDGFC + +[Term] +id: FPLX:000351 +name: PDGF-DD +synonym: "PDGF DD" EXACT [] +synonym: "PDGF-DD" EXACT [] +synonym: "PDGF-dd" EXACT [] +xref: RE:R-HSA-381930 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:30620 ! PDGFD + +[Term] +id: FPLX:000352 +name: PDH +synonym: "PDH" EXACT [] +synonym: "pyruvate dehydrogenase (acetyl-transferring)" EXACT [] +xref: BEL:"Pyruvate Dehydrogenase Complex" +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:2896 ! DLAT +relationship: has_part HGNC:2898 ! DLD +relationship: has_part HGNC:8806 ! PDHA1 +relationship: has_part HGNC:8807 ! PDHA2 +relationship: has_part HGNC:8808 ! PDHB +relationship: has_part HGNC:21350 ! PDHX + +[Term] +id: FPLX:000353 +name: PDK +synonym: "PDK" EXACT [] +synonym: "PDKs" EXACT [] +synonym: "Pyruvate dehydrogenase kinase" EXACT [] +synonym: "pyruvate dehydrogenase kinase" EXACT [] +xref: BEL:"PDK Family" +xref: ECCODE:1.2.4.1 +xref: RE:R-HSA-203947 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:8809 ! PDK1 +relationship: inverse_is_a HGNC:8810 ! PDK2 +relationship: inverse_is_a HGNC:8811 ! PDK3 +relationship: inverse_is_a HGNC:8812 ! PDK4 + +[Term] +id: FPLX:000354 +name: Pertussis-toxin +synonym: "Pertussis toxin" EXACT [] +synonym: "pertussis toxin" EXACT [] +synonym: "PTX" EXACT [] +xref: NCIT:C736 +is_a: FPLX:000000 ! famplex + +[Term] +id: FPLX:000355 +name: PFN +synonym: "Profilin" EXACT [] +synonym: "profilin" EXACT [] +synonym: "Profilins" EXACT [] +synonym: "profilins" EXACT [] +xref: BEL:"PFN Family" +xref: IP:IPR005455 +xref: MEDSCAN:urn:agi-protfc:profilin +xref: XFAM:PF00235 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:8881 ! PFN1 +relationship: inverse_is_a HGNC:8882 ! PFN2 +relationship: inverse_is_a HGNC:18627 ! PFN3 +relationship: inverse_is_a HGNC:31103 ! PFN4 + +[Term] +id: FPLX:000356 +name: PhK +synonym: "PhK" EXACT [] +synonym: "Phosphorylase kinase" EXACT [] +synonym: "phosphorylase kinase" EXACT [] +xref: BEL:"Phosphorylase B Kinase Complex" +xref: ECCODE:2.7.11.19 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:1442 ! CALM1 +relationship: has_part HGNC:8925 ! PHKA1 +relationship: has_part HGNC:8926 ! PHKA2 +relationship: has_part HGNC:8927 ! PHKB +relationship: has_part HGNC:8930 ! PHKG1 +relationship: has_part HGNC:8931 ! PHKG2 + +[Term] +id: FPLX:000357 +name: Phosphatase +synonym: "phosphatase" EXACT [] +xref: MESH:D010749 +xref: NCIT:C16981 +is_a: FPLX:000000 ! famplex + +[Term] +id: FPLX:000358 +name: PI3K +synonym: "phosphatidylinositol 3-kinase" EXACT [] +synonym: "PI 3-kinase" EXACT [] +synonym: "PI 3-kinases" EXACT [] +synonym: "PI3-kinase" EXACT [] +synonym: "PI3K" EXACT [] +synonym: "PI3Kinase" EXACT [] +xref: BEL:"p85/p110 PI3Kinase Complex" +xref: MEDSCAN:urn:agi-aopfc:0000447 +xref: MEDSCAN:urn:agi-complex:prophash-285b9ff3749679e4d6266406a20973aa +xref: NCIT:C17270 +is_a: FPLX:000000 ! famplex +relationship: has_part FPLX:000359 ! PI3K_p110 +relationship: has_part FPLX:000361 ! PIK3R_I + +[Term] +id: FPLX:000359 +name: PI3K-p110 +synonym: "p110" EXACT [] +synonym: "PI3K p110 subunit" EXACT [] +synonym: "PIK3C" EXACT [] +xref: BEL:"PIK3C Class IA Family" +xref: IP:IPR003113 +relationship: part_of FPLX:000358 ! PI3K +relationship: inverse_is_a HGNC:8975 ! PIK3CA +relationship: inverse_is_a HGNC:8976 ! PIK3CB +relationship: inverse_is_a HGNC:8977 ! PIK3CD +relationship: inverse_is_a HGNC:8978 ! PIK3CG + +[Term] +id: FPLX:000360 +name: PI3K-p85 +synonym: "p85" EXACT [] +xref: RE:R-HSA-74688 +is_a: FPLX:000361 ! PIK3R_I +relationship: inverse_is_a HGNC:8979 ! PIK3R1 +relationship: inverse_is_a HGNC:8980 ! PIK3R2 + +[Term] +id: FPLX:000361 +name: PIK3R-I +synonym: "PIK3R" EXACT [] +xref: BEL:"PIK3R Class IA Family" +relationship: part_of FPLX:000358 ! PI3K +relationship: inverse_is_a HGNC:8981 ! PIK3R3 +relationship: inverse_is_a HGNC:8982 ! PIK3R4 +relationship: inverse_is_a HGNC:30035 ! PIK3R5 +relationship: inverse_is_a HGNC:27101 ! PIK3R6 +relationship: inverse_is_a FPLX:000360 ! PI3K_p85 + +[Term] +id: FPLX:000362 +name: PIM +synonym: "PIM" EXACT [] +xref: IP:IPR017348 +xref: NEXTPROT-FAMILY:03078 +xref: SIGNOR:SIGNOR-PF34 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:8986 ! PIM1 +relationship: inverse_is_a HGNC:8987 ! PIM2 +relationship: inverse_is_a HGNC:19310 ! PIM3 + +[Term] +id: FPLX:000363 +name: PKA +synonym: "cAMP-dependent PK" EXACT [] +synonym: "cAMP-dependent protein kinase" EXACT [] +synonym: "cyclic AMP-dependent protein kinase" EXACT [] +synonym: "cyclic-AMP-dependent protein kinase" EXACT [] +synonym: "PK-A" EXACT [] +synonym: "PKA" EXACT [] +synonym: "protein kinase A" EXACT [] +xref: ECCODE:2.7.11.11 +xref: NCIT:C16479 +is_a: FPLX:000000 ! famplex +relationship: has_part FPLX:000390 ! PRKAR +relationship: has_part FPLX:000389 ! PRKAC + +[Term] +id: FPLX:000364 +name: PKC +synonym: "PKC" EXACT [] +synonym: "protein kinase C" EXACT [] +xref: BEL:"PRKC Family" +xref: ECCODE:2.7.11.13 +xref: IP:IPR012233 +xref: MESH:D011493 +xref: NCIT:C17017 +xref: NEXTPROT-FAMILY:03065 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:9393 ! PRKCA +relationship: inverse_is_a HGNC:9395 ! PRKCB +relationship: inverse_is_a HGNC:9399 ! PRKCD +relationship: inverse_is_a HGNC:9401 ! PRKCE +relationship: inverse_is_a HGNC:9402 ! PRKCG +relationship: inverse_is_a HGNC:9403 ! PRKCH +relationship: inverse_is_a HGNC:9404 ! PRKCI +relationship: inverse_is_a HGNC:9410 ! PRKCQ +relationship: inverse_is_a HGNC:9412 ! PRKCZ +relationship: inverse_is_a HGNC:9408 ! PRKD3 + +[Term] +id: FPLX:000365 +name: PKI +synonym: "PKI" EXACT [] +xref: BEL:"PKI Family" +xref: IP:IPR004171 +xref: XFAM:PF02827 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:9017 ! PKIA +relationship: inverse_is_a HGNC:9018 ! PKIB +relationship: inverse_is_a HGNC:9019 ! PKIG + +[Term] +id: FPLX:000366 +name: PLA2 +synonym: "cPLA2" EXACT [] +synonym: "cytosolic phospholipase A(2)" EXACT [] +synonym: "cytosolic phospholipase A2" EXACT [] +synonym: "cytosolic PLA2" EXACT [] +synonym: "phospholipase A2" EXACT [] +xref: BEL:"PLA2 Family" +xref: ECCODE:3.1.1.4 +xref: MEDSCAN:urn:agi-aopfc:0000455 +xref: MEDSCAN:urn:agi-protfc:cytosolic%20phospholipase%20a2 +xref: NCIT:C16979 +xref: NEXTPROT-FAMILY:02840 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:9030 ! PLA2G1B +relationship: inverse_is_a HGNC:17934 ! PLA2G3 +relationship: inverse_is_a HGNC:9038 ! PLA2G5 +relationship: inverse_is_a HGNC:9039 ! PLA2G6 +relationship: inverse_is_a HGNC:9040 ! PLA2G7 +relationship: inverse_is_a HGNC:9029 ! PLA2G10 +relationship: inverse_is_a HGNC:18554 ! PLA2G12A +relationship: inverse_is_a HGNC:18555 ! PLA2G12B +relationship: inverse_is_a FPLX:000367 ! PLA2G2 +relationship: inverse_is_a FPLX:000368 ! PLA2G4 + +[Term] +id: FPLX:000367 +name: PLA2G2 +synonym: "GII PLA2" EXACT [] +synonym: "GIIPLA2" EXACT [] +synonym: "phospholipase A2 group-II" EXACT [] +synonym: "PLA2G2" EXACT [] +synonym: "PLA2g2" EXACT [] +xref: BEL:"PLA2G2 Family" +is_a: FPLX:000366 ! PLA2 +relationship: inverse_is_a HGNC:9031 ! PLA2G2A +relationship: inverse_is_a HGNC:9032 ! PLA2G2C +relationship: inverse_is_a HGNC:9033 ! PLA2G2D +relationship: inverse_is_a HGNC:13414 ! PLA2G2E +relationship: inverse_is_a HGNC:30040 ! PLA2G2F + +[Term] +id: FPLX:000368 +name: PLA2G4 +synonym: "gIV-PLA(2)" EXACT [] +synonym: "group IV-PLA(2)" EXACT [] +synonym: "Phospholipase A2 Group IV" EXACT [] +synonym: "phospholipase A2 group-IV" EXACT [] +synonym: "PLA2G4" EXACT [] +xref: NCIT:C19836 +is_a: FPLX:000366 ! PLA2 +relationship: inverse_is_a HGNC:9035 ! PLA2G4A +relationship: inverse_is_a HGNC:9037 ! PLA2G4C +relationship: inverse_is_a HGNC:30038 ! PLA2G4D + +[Term] +id: FPLX:000369 +name: PLC +synonym: "Phospholipase C" EXACT [] +synonym: "phospholipase C" EXACT [] +synonym: "Phospholipase-C" EXACT [] +synonym: "phospholipase-C" EXACT [] +synonym: "PLC" EXACT [] +xref: BEL:"PLC Family" +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:17175 ! PLCE1 +relationship: inverse_is_a HGNC:19218 ! PLCZ1 +relationship: inverse_is_a FPLX:000370 ! PLCB +relationship: inverse_is_a FPLX:000371 ! PLCD +relationship: inverse_is_a FPLX:000372 ! PLCG + +[Term] +id: FPLX:000370 +name: PLCB +synonym: "Phospholipase C-beta" EXACT [] +synonym: "phospholipase C-beta" EXACT [] +synonym: "Phospholipase C-β" EXACT [] +synonym: "phospholipase C-β" EXACT [] +synonym: "Phospholipase Cbeta" EXACT [] +synonym: "phospholipase Cbeta" EXACT [] +synonym: "Phospholipase Cβ" EXACT [] +synonym: "phospholipase Cβ" EXACT [] +xref: BEL:"PLCB Family" +xref: IP:IPR016280 +xref: RE:R-HSA-111854 +is_a: FPLX:000369 ! PLC +relationship: inverse_is_a HGNC:15917 ! PLCB1 +relationship: inverse_is_a HGNC:9055 ! PLCB2 +relationship: inverse_is_a HGNC:9056 ! PLCB3 +relationship: inverse_is_a HGNC:9059 ! PLCB4 + +[Term] +id: FPLX:000371 +name: PLCD +synonym: "Phospholipase C-delta" EXACT [] +synonym: "phospholipase C-delta" EXACT [] +synonym: "Phospholipase C-δ" EXACT [] +synonym: "phospholipase C-δ" EXACT [] +synonym: "Phospholipase Cdelta" EXACT [] +synonym: "phospholipase Cdelta" EXACT [] +synonym: "Phospholipase Cδ" EXACT [] +synonym: "phospholipase Cδ" EXACT [] +is_a: FPLX:000369 ! PLC +relationship: inverse_is_a HGNC:9060 ! PLCD1 +relationship: inverse_is_a HGNC:9061 ! PLCD3 +relationship: inverse_is_a HGNC:9062 ! PLCD4 + +[Term] +id: FPLX:000372 +name: PLCG +synonym: "PLC-gamma" EXACT [] +synonym: "PLC-γ" EXACT [] +xref: BEL:"PLCG Family" +xref: IP:IPR016279 +xref: IP:IPR035023 +xref: IP:IPR035024 +xref: NCIT:C126114 +xref: RE:R-HSA-1168365 +xref: RE:R-HSA-1169086 +xref: RE:R-HSA-1169089 +xref: RE:R-HSA-2029095 +xref: RE:R-HSA-2685653 +is_a: FPLX:000369 ! PLC +relationship: inverse_is_a HGNC:9065 ! PLCG1 +relationship: inverse_is_a HGNC:9066 ! PLCG2 + +[Term] +id: FPLX:000373 +name: PLD +synonym: "Phospholipase D" EXACT [] +synonym: "phospholipase D" EXACT [] +xref: BEL:"PLD Family" +xref: ECCODE:3.1.4.4 +xref: IP:IPR015679 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:9067 ! PLD1 +relationship: inverse_is_a HGNC:9068 ! PLD2 +relationship: inverse_is_a HGNC:17158 ! PLD3 +relationship: inverse_is_a HGNC:23792 ! PLD4 +relationship: inverse_is_a HGNC:26879 ! PLD5 +relationship: inverse_is_a HGNC:30447 ! PLD6 + +[Term] +id: FPLX:000374 +name: PPAP2 +synonym: "type 2 phosphatidic acid phosphatase" EXACT [] +synonym: "type 2 phosphatidic acid phosphatases" EXACT [] +synonym: "type II phosphatidic acid phosphatase" EXACT [] +synonym: "type II phosphatidic acid phosphatases" EXACT [] +xref: BEL:"PPAP2 Family" +xref: RE:R-HSA-428110 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:9228 ! PLPP1 +relationship: inverse_is_a HGNC:9230 ! PLPP2 +relationship: inverse_is_a HGNC:9229 ! PLPP3 + +[Term] +id: FPLX:000375 +name: PPAR +synonym: "PPAR" EXACT [] +xref: BEL:"PPAR Family" +xref: IP:IPR003074 +xref: MEDSCAN:urn:agi-protfc:ppar +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:9232 ! PPARA +relationship: inverse_is_a HGNC:9235 ! PPARD +relationship: inverse_is_a HGNC:9236 ! PPARG + +[Term] +id: FPLX:000376 +name: PPP1 +synonym: "PP1 regulator" EXACT [] +synonym: "PP1" EXACT [] +synonym: "PPP1" EXACT [] +xref: GO:0008599 +xref: MEDSCAN:urn:agi-complex:prophash-d39afef40daf23ad8376b53904c7092c +xref: MEDSCAN:urn:agi-complex:protein%20phosphatase%20type%201%20complex +xref: NEXTPROT-FAMILY:03001 +is_a: FPLX:000000 ! famplex +relationship: has_part FPLX:000377 ! PPP1C +relationship: has_part FPLX:000378 ! PPP1R + +[Term] +id: FPLX:000377 +name: PPP1C +synonym: "PP1C" EXACT [] +synonym: "PP1c" EXACT [] +synonym: "PPP1C" EXACT [] +xref: BEL:"PPP1C Family" +xref: IP:IPR031675 +xref: RE:R-HSA-163538 +relationship: part_of FPLX:000376 ! PPP1 +relationship: inverse_is_a HGNC:9281 ! PPP1CA +relationship: inverse_is_a HGNC:9282 ! PPP1CB +relationship: inverse_is_a HGNC:9283 ! PPP1CC + +[Term] +id: FPLX:000378 +name: PPP1R +synonym: "PP1R" EXACT [] +synonym: "PP1r" EXACT [] +xref: BEL:"PPP1R Family" +relationship: part_of FPLX:000376 ! PPP1 +relationship: inverse_is_a HGNC:9284 ! PPP1R10 +relationship: inverse_is_a HGNC:9285 ! PPP1R11 +relationship: inverse_is_a HGNC:7618 ! PPP1R12A +relationship: inverse_is_a HGNC:7619 ! PPP1R12B +relationship: inverse_is_a HGNC:14947 ! PPP1R12C +relationship: inverse_is_a HGNC:14950 ! PPP1R13B +relationship: inverse_is_a HGNC:14871 ! PPP1R14A +relationship: inverse_is_a HGNC:9057 ! PPP1R14B +relationship: inverse_is_a HGNC:14952 ! PPP1R14C +relationship: inverse_is_a HGNC:14953 ! PPP1R14D +relationship: inverse_is_a HGNC:14375 ! PPP1R15A +relationship: inverse_is_a HGNC:14951 ! PPP1R15B +relationship: inverse_is_a HGNC:14941 ! PPP1R16A +relationship: inverse_is_a HGNC:15850 ! PPP1R16B +relationship: inverse_is_a HGNC:9286 ! PPP1R1A +relationship: inverse_is_a HGNC:9287 ! PPP1R1B +relationship: inverse_is_a HGNC:14940 ! PPP1R1C +relationship: inverse_is_a HGNC:9288 ! PPP1R2 +relationship: inverse_is_a HGNC:9291 ! PPP1R3A +relationship: inverse_is_a HGNC:14942 ! PPP1R3B +relationship: inverse_is_a HGNC:9293 ! PPP1R3C +relationship: inverse_is_a HGNC:9294 ! PPP1R3D +relationship: inverse_is_a HGNC:14944 ! PPP1R3F +relationship: inverse_is_a HGNC:9295 ! PPP1R7 +relationship: inverse_is_a HGNC:9296 ! PPP1R8 +relationship: inverse_is_a HGNC:14946 ! PPP1R9A +relationship: inverse_is_a HGNC:9298 ! PPP1R9B + +[Term] +id: FPLX:000379 +name: PPP2 +synonym: "PP2 phosphatases" EXACT [] +synonym: "PP2" EXACT [] +synonym: "PP2A" EXACT [] +synonym: "protein phosphatase 2" EXACT [] +xref: MEDSCAN:urn:agi-complex:prophash-f2e03d3bf1f747adab17ce77b9b5e5b3 +xref: MEDSCAN:urn:agi-complex:protein%20phosphatase%20type%202A%20complex +xref: RE:R-HSA-196206 +is_a: FPLX:000000 ! famplex +relationship: has_part FPLX:000380 ! PPP2C +relationship: has_part FPLX:000381 ! PPP2R_A +relationship: has_part FPLX:000382 ! PPP2R_B + +[Term] +id: FPLX:000380 +name: PPP2C +synonym: "PP2A catalytic C subunit" EXACT [] +synonym: "PP2A-C" EXACT [] +synonym: "PP2Ac" EXACT [] +xref: BEL:"PPP2C Family" +relationship: part_of FPLX:000379 ! PPP2 +relationship: inverse_is_a HGNC:20785 ! PPM1J +relationship: inverse_is_a HGNC:9299 ! PPP2CA +relationship: inverse_is_a HGNC:9300 ! PPP2CB + +[Term] +id: FPLX:000381 +name: PPP2R-A +synonym: "PP2A regulatory subunit A" EXACT [] +synonym: "regulatory A subunit of PP2A" EXACT [] +xref: BEL:"PPP2R Subunit A Family" +xref: RE:R-HSA-165990 +xref: RE:R-HSA-165997 +relationship: part_of FPLX:000379 ! PPP2 +relationship: inverse_is_a HGNC:9302 ! PPP2R1A +relationship: inverse_is_a HGNC:9303 ! PPP2R1B + +[Term] +id: FPLX:000382 +name: PPP2R-B +synonym: "PP2A regulatory subunit B" EXACT [] +synonym: "regulatory B subunit of PP2A" EXACT [] +xref: BEL:"PPP2R Subunit B Family" +relationship: part_of FPLX:000379 ! PPP2 +relationship: inverse_is_a HGNC:9304 ! PPP2R2A +relationship: inverse_is_a HGNC:9305 ! PPP2R2B +relationship: inverse_is_a HGNC:9306 ! PPP2R2C +relationship: inverse_is_a HGNC:23732 ! PPP2R2D +relationship: inverse_is_a HGNC:9307 ! PPP2R3A +relationship: inverse_is_a HGNC:13417 ! PPP2R3B +relationship: inverse_is_a HGNC:9308 ! PTPA +relationship: inverse_is_a HGNC:9309 ! PPP2R5A +relationship: inverse_is_a HGNC:9310 ! PPP2R5B +relationship: inverse_is_a HGNC:9311 ! PPP2R5C +relationship: inverse_is_a HGNC:9312 ! PPP2R5D +relationship: inverse_is_a HGNC:9313 ! PPP2R5E + +[Term] +id: FPLX:000383 +name: PPP3 +synonym: "calcineurin" EXACT [] +synonym: "CaN" EXACT [] +synonym: "PP2B" EXACT [] +synonym: "protein phosphatase 2B" EXACT [] +xref: BEL:"Calcineurin Complex" +xref: BEL:"PPP3 Family" +xref: MEDSCAN:urn:agi-complex:protein%20phosphatase%203 +is_a: FPLX:000000 ! famplex +relationship: has_part FPLX:000384 ! PPP3C +relationship: has_part FPLX:000385 ! PPP3R + +[Term] +id: FPLX:000384 +name: PPP3C +synonym: "Calcineurin catalytic subunit" EXACT [] +synonym: "catalytic subunit of calcineurin" EXACT [] +synonym: "PP2B catalytic subunit" EXACT [] +xref: BEL:"PPP3C Family" +xref: RE:R-HSA-201779 +xref: RE:R-HSA-201798 +xref: SIGNOR:SIGNOR-PF18 +relationship: part_of FPLX:000383 ! PPP3 +relationship: inverse_is_a HGNC:9314 ! PPP3CA +relationship: inverse_is_a HGNC:9315 ! PPP3CB +relationship: inverse_is_a HGNC:9316 ! PPP3CC + +[Term] +id: FPLX:000385 +name: PPP3R +synonym: "Calcineurin regulatory subunit" EXACT [] +synonym: "regulatory subunit of calcineurin" EXACT [] +xref: BEL:"PPP3R Family" +xref: NEXTPROT-FAMILY:00421 +relationship: part_of FPLX:000383 ! PPP3 +relationship: inverse_is_a HGNC:9317 ! PPP3R1 +relationship: inverse_is_a HGNC:9318 ! PPP3R2 + +[Term] +id: FPLX:000386 +name: PRC1-complex +synonym: "polycomb Repressive Complex (PRC) 1" EXACT [] +synonym: "Polycomb Repressive Complex 1" EXACT [] +synonym: "Polycomb repressive complex 1" EXACT [] +synonym: "polycomb repressive complex 1" EXACT [] +synonym: "Polycomb repressive complex PRC1" EXACT [] +synonym: "Polycomb Repressive Complexes 1" EXACT [] +synonym: "Polycomb-repressive complex 1" EXACT [] +synonym: "PRC1" EXACT [] +xref: BEL:"PRC1 Maintenance Complex" +xref: GO:0035102 +xref: MEDSCAN:urn:agi-complex:prophash-aba0c4130764ae7a26054736114e65cd +xref: NCIT:C19866 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:1066 ! BMI1 +relationship: has_part HGNC:1552 ! CBX2 +relationship: has_part HGNC:1554 ! CBX4 +relationship: has_part HGNC:15962 ! CBX8 +relationship: has_part HGNC:12929 ! PCGF2 +relationship: has_part HGNC:3182 ! PHC1 +relationship: has_part HGNC:3183 ! PHC2 +relationship: has_part HGNC:15682 ! PHC3 +relationship: has_part HGNC:8919 ! PHF1 +relationship: has_part HGNC:10018 ! RING1 +relationship: has_part HGNC:10061 ! RNF2 +relationship: has_part HGNC:19003 ! SCMH1 +relationship: has_part HGNC:12856 ! YY1 +relationship: has_part HGNC:12918 ! ZNF134 + +[Term] +id: FPLX:000387 +name: PRC2-complex +synonym: "Polycomb Repressive Complex 2" EXACT [] +synonym: "Polycomb repressive complex 2" EXACT [] +synonym: "polycomb repressive complex 2" EXACT [] +synonym: "Polycomb repressive complex PRC2" EXACT [] +synonym: "Polycomb Repressive Complexes 2" EXACT [] +synonym: "Polycomb-repressive complex 2" EXACT [] +synonym: "PRC2" EXACT [] +xref: BEL:"PRC2 Initiation Complex" +xref: GO:0035098 +xref: MEDSCAN:urn:agi-complex:prophash-2b612daa76feb2db86ff39e70449df6b +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:3188 ! EED +relationship: has_part HGNC:3526 ! EZH1 +relationship: has_part HGNC:3527 ! EZH2 +relationship: has_part HGNC:17101 ! SUZ12 + +[Term] +id: FPLX:000388 +name: PRDX +synonym: "Peroxiredoxin" EXACT [] +synonym: "peroxiredoxin" EXACT [] +synonym: "Peroxiredoxins" EXACT [] +synonym: "peroxiredoxins" EXACT [] +xref: BEL:"PRDX Family" +xref: ECCODE:1.11.1.15 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:9352 ! PRDX1 +relationship: inverse_is_a HGNC:9353 ! PRDX2 +relationship: inverse_is_a HGNC:9354 ! PRDX3 +relationship: inverse_is_a HGNC:17169 ! PRDX4 +relationship: inverse_is_a HGNC:9355 ! PRDX5 +relationship: inverse_is_a HGNC:16753 ! PRDX6 + +[Term] +id: FPLX:000389 +name: PRKAC +synonym: "PKA catalytic subunit" EXACT [] +synonym: "PKA catalytic subunits" EXACT [] +synonym: "Protein kinase A catalytic subunit" EXACT [] +synonym: "protein kinase A catalytic subunit" EXACT [] +synonym: "Protein kinase A catalytic subunits" EXACT [] +synonym: "protein kinase A catalytic subunits" EXACT [] +xref: BEL:"PRKA Family" +xref: SIGNOR:SIGNOR-PF17 +relationship: part_of FPLX:000363 ! PKA +relationship: inverse_is_a HGNC:9380 ! PRKACA +relationship: inverse_is_a HGNC:9381 ! PRKACB +relationship: inverse_is_a HGNC:9382 ! PRKACG + +[Term] +id: FPLX:000390 +name: PRKAR +synonym: "PKA regulatory subunit" EXACT [] +synonym: "PKA regulatory subunits" EXACT [] +synonym: "Protein kinase A regulatory subunit" EXACT [] +synonym: "protein kinase A regulatory subunit" EXACT [] +synonym: "Protein kinase A regulatory subunits" EXACT [] +synonym: "protein kinase A regulatory subunits" EXACT [] +synonym: "rPKA" EXACT [] +xref: BEL:"PRKAR Family" +xref: IP:IPR012198 +xref: RE:R-HSA-111921 +xref: RE:R-HSA-111923 +xref: RE:R-HSA-5610566 +xref: RE:R-HSA-5610568 +relationship: part_of FPLX:000363 ! PKA +relationship: inverse_is_a HGNC:9388 ! PRKAR1A +relationship: inverse_is_a HGNC:9390 ! PRKAR1B +relationship: inverse_is_a HGNC:9391 ! PRKAR2A +relationship: inverse_is_a HGNC:9392 ! PRKAR2B + +[Term] +id: FPLX:000391 +name: PRKG +synonym: "PKG" EXACT [] +synonym: "protein kinase G" EXACT [] +xref: BEL:"PRKG Family" +xref: ECCODE:2.7.11.12 +xref: IP:IPR002374 +xref: IP:IPR035014 +xref: RE:R-HSA-418379 +xref: RE:R-HSA-4551456 +xref: RE:R-HSA-4551462 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:9414 ! PRKG1 +relationship: inverse_is_a HGNC:9416 ! PRKG2 + +[Term] +id: FPLX:000392 +name: Propionyl-CoA-carboxylase +synonym: "Propionyl-CoA carboxylase" EXACT [] +synonym: "propionyl-CoA carboxylase" EXACT [] +xref: BEL:"Propionyl CoA Carboxylase Complex" +xref: ECCODE:6.4.1.3 +xref: RE:R-HSA-2993807 +xref: RE:R-HSA-2993809 +xref: RE:R-HSA-3323122 +xref: RE:R-HSA-3323155 +xref: RE:R-HSA-71025 +xref: RE:R-HSA-71026 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:8653 ! PCCA +relationship: has_part HGNC:8654 ! PCCB + +[Term] +id: FPLX:000393 +name: Protease +synonym: "protease" EXACT [] +xref: NCIT:C16965 +is_a: FPLX:000000 ! famplex + +[Term] +id: FPLX:000394 +name: Proteasome +synonym: "proteasome endopeptidase" EXACT [] +synonym: "proteasome" EXACT [] +xref: BEL:"Proteasome Complex" +xref: ECCODE:3.4.25.1 +xref: GO:0000502 +xref: MESH:D046988 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:9530 ! PSMA1 +relationship: has_part HGNC:9531 ! PSMA2 +relationship: has_part HGNC:9532 ! PSMA3 +relationship: has_part HGNC:9533 ! PSMA4 +relationship: has_part HGNC:9534 ! PSMA5 +relationship: has_part HGNC:9535 ! PSMA6 +relationship: has_part HGNC:9536 ! PSMA7 +relationship: has_part HGNC:22985 ! PSMA8 +relationship: has_part HGNC:9537 ! PSMB1 +relationship: has_part HGNC:9538 ! PSMB10 +relationship: has_part HGNC:9539 ! PSMB2 +relationship: has_part HGNC:9540 ! PSMB3 +relationship: has_part HGNC:9541 ! PSMB4 +relationship: has_part HGNC:9542 ! PSMB5 +relationship: has_part HGNC:9543 ! PSMB6 +relationship: has_part HGNC:9544 ! PSMB7 +relationship: has_part HGNC:9545 ! PSMB8 +relationship: has_part HGNC:9546 ! PSMB9 +relationship: has_part HGNC:9547 ! PSMC1 +relationship: has_part HGNC:9548 ! PSMC2 +relationship: has_part HGNC:9549 ! PSMC3 +relationship: has_part HGNC:9551 ! PSMC4 +relationship: has_part HGNC:9552 ! PSMC5 +relationship: has_part HGNC:9553 ! PSMC6 +relationship: has_part HGNC:9554 ! PSMD1 +relationship: has_part HGNC:9555 ! PSMD10 +relationship: has_part HGNC:9556 ! PSMD11 +relationship: has_part HGNC:9557 ! PSMD12 +relationship: has_part HGNC:9558 ! PSMD13 +relationship: has_part HGNC:16889 ! PSMD14 +relationship: has_part HGNC:9559 ! PSMD2 +relationship: has_part HGNC:9560 ! PSMD3 +relationship: has_part HGNC:9561 ! PSMD4 +relationship: has_part HGNC:9563 ! PSMD5 +relationship: has_part HGNC:9564 ! PSMD6 +relationship: has_part HGNC:9565 ! PSMD7 +relationship: has_part HGNC:9566 ! PSMD8 +relationship: has_part HGNC:9567 ! PSMD9 +relationship: has_part HGNC:9568 ! PSME1 +relationship: has_part HGNC:9569 ! PSME2 +relationship: has_part HGNC:9570 ! PSME3 +relationship: has_part HGNC:9571 ! PSMF1 +relationship: has_part HGNC:10845 ! SEM1 +relationship: has_part HGNC:12628 ! USP5 + +[Term] +id: FPLX:000395 +name: PTGER +synonym: "prostaglandin E receptor" EXACT [] +xref: BEL:"PTGER Family" +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:9593 ! PTGER1 +relationship: inverse_is_a HGNC:9594 ! PTGER2 +relationship: inverse_is_a HGNC:9595 ! PTGER3 +relationship: inverse_is_a HGNC:9596 ! PTGER4 + +[Term] +id: FPLX:000396 +name: PYG +synonym: "Glycogen phosphorylase" EXACT [] +synonym: "Glycogen phosphorylases" EXACT [] +synonym: "glycogen phosphorylase" EXACT [] +synonym: "glycogen phosphorylases" EXACT [] +synonym: "PYG" EXACT [] +is_a: FPLX:000198 ! Glycosyltransferase +relationship: inverse_is_a HGNC:9723 ! PYGB +relationship: inverse_is_a HGNC:9725 ! PYGL +relationship: inverse_is_a HGNC:9726 ! PYGM + +[Term] +id: FPLX:000397 +name: RAB +synonym: "Rab GTPase" EXACT [] +synonym: "Rab GTPases" EXACT [] +synonym: "rab GTPases" EXACT [] +synonym: "rab proteins" EXACT [] +synonym: "RAB" EXACT [] +synonym: "Rab" EXACT [] +synonym: "rab" EXACT [] +synonym: "Rabs" EXACT [] +xref: BEL:"RAB Family" +xref: MEDSCAN:urn:agi-protfc:rab +xref: NEXTPROT-FAMILY:03661 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:9759 ! RAB10 +relationship: inverse_is_a HGNC:9760 ! RAB11A +relationship: inverse_is_a HGNC:9761 ! RAB11B +relationship: inverse_is_a HGNC:31332 ! RAB12 +relationship: inverse_is_a HGNC:9762 ! RAB13 +relationship: inverse_is_a HGNC:16524 ! RAB14 +relationship: inverse_is_a HGNC:20150 ! RAB15 +relationship: inverse_is_a HGNC:16523 ! RAB17 +relationship: inverse_is_a HGNC:14244 ! RAB18 +relationship: inverse_is_a HGNC:19982 ! RAB19 +relationship: inverse_is_a HGNC:9758 ! RAB1A +relationship: inverse_is_a HGNC:18370 ! RAB1B +relationship: inverse_is_a HGNC:23683 ! RAB1C +relationship: inverse_is_a HGNC:18260 ! RAB20 +relationship: inverse_is_a HGNC:18263 ! RAB21 +relationship: inverse_is_a HGNC:9764 ! RAB22A +relationship: inverse_is_a HGNC:14263 ! RAB23 +relationship: inverse_is_a HGNC:9765 ! RAB24 +relationship: inverse_is_a HGNC:18238 ! RAB25 +relationship: inverse_is_a HGNC:14259 ! RAB26 +relationship: inverse_is_a HGNC:9766 ! RAB27A +relationship: inverse_is_a HGNC:9767 ! RAB27B +relationship: inverse_is_a HGNC:9768 ! RAB28 +relationship: inverse_is_a HGNC:9763 ! RAB2A +relationship: inverse_is_a HGNC:20246 ! RAB2B +relationship: inverse_is_a HGNC:9770 ! RAB30 +relationship: inverse_is_a HGNC:9771 ! RAB31 +relationship: inverse_is_a HGNC:9772 ! RAB32 +relationship: inverse_is_a HGNC:9773 ! RAB33A +relationship: inverse_is_a HGNC:16075 ! RAB33B +relationship: inverse_is_a HGNC:16519 ! RAB34 +relationship: inverse_is_a HGNC:9774 ! RAB35 +relationship: inverse_is_a HGNC:9775 ! RAB36 +relationship: inverse_is_a HGNC:30268 ! RAB37 +relationship: inverse_is_a HGNC:9776 ! RAB38 +relationship: inverse_is_a HGNC:16521 ! RAB39A +relationship: inverse_is_a HGNC:16499 ! RAB39B +relationship: inverse_is_a HGNC:9777 ! RAB3A +relationship: inverse_is_a HGNC:9778 ! RAB3B +relationship: inverse_is_a HGNC:30269 ! RAB3C +relationship: inverse_is_a HGNC:9779 ! RAB3D +relationship: inverse_is_a HGNC:18283 ! RAB40A +relationship: inverse_is_a HGNC:25410 ! RAB40AL +relationship: inverse_is_a HGNC:18284 ! RAB40B +relationship: inverse_is_a HGNC:18285 ! RAB40C +relationship: inverse_is_a HGNC:18293 ! RAB41 +relationship: inverse_is_a HGNC:28702 ! RAB42 +relationship: inverse_is_a HGNC:19983 ! RAB43 +relationship: inverse_is_a HGNC:21068 ! RAB44 +relationship: inverse_is_a HGNC:9781 ! RAB4A +relationship: inverse_is_a HGNC:9782 ! RAB4B +relationship: inverse_is_a HGNC:9783 ! RAB5A +relationship: inverse_is_a HGNC:9784 ! RAB5B +relationship: inverse_is_a HGNC:9785 ! RAB5C +relationship: inverse_is_a HGNC:9786 ! RAB6A +relationship: inverse_is_a HGNC:14902 ! RAB6B +relationship: inverse_is_a HGNC:16525 ! RAB6C +relationship: inverse_is_a HGNC:9788 ! RAB7A +relationship: inverse_is_a HGNC:30513 ! RAB7B +relationship: inverse_is_a HGNC:9789 ! RAB29 +relationship: inverse_is_a HGNC:7007 ! RAB8A +relationship: inverse_is_a HGNC:30273 ! RAB8B +relationship: inverse_is_a HGNC:9792 ! RAB9A +relationship: inverse_is_a HGNC:14090 ! RAB9B +relationship: inverse_is_a HGNC:9799 ! RABL2A +relationship: inverse_is_a HGNC:9800 ! RABL2B +relationship: inverse_is_a HGNC:18072 ! RABL3 +relationship: inverse_is_a HGNC:21895 ! IFT22 + +[Term] +id: FPLX:000398 +name: RAC +synonym: "RAC" EXACT [] +xref: BEL:"RAC Family" +xref: NEXTPROT-FAMILY:03066 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:9801 ! RAC1 +relationship: inverse_is_a HGNC:9802 ! RAC2 +relationship: inverse_is_a HGNC:9803 ! RAC3 +relationship: inverse_is_a HGNC:672 ! RHOG + +[Term] +id: FPLX:000399 +name: RAF +synonym: "RAF" EXACT [] +synonym: "Raf" EXACT [] +xref: BEL:"RAF Family" +xref: NEXTPROT-FAMILY:03114 +xref: RE:R-HSA-5672708 +xref: RE:R-HSA-5672726 +xref: RE:R-HSA-5674134 +xref: RE:R-HSA-5674136 +is_a: FPLX:000282 ! MAP3K +relationship: inverse_is_a HGNC:646 ! ARAF +relationship: inverse_is_a HGNC:1097 ! BRAF +relationship: inverse_is_a HGNC:9829 ! RAF1 + +[Term] +id: FPLX:000400 +name: RAL +synonym: "RAL family" EXACT [] +synonym: "Ral family" EXACT [] +synonym: "RAL isoforms" EXACT [] +synonym: "Ral isoforms" EXACT [] +synonym: "RAL proteins" EXACT [] +synonym: "Ral proteins" EXACT [] +synonym: "RAL" EXACT [] +xref: IP:IPR028412 +xref: RE:R-HSA-170994 +xref: RE:R-HSA-170998 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:9839 ! RALA +relationship: inverse_is_a HGNC:9840 ! RALB + +[Term] +id: FPLX:000401 +name: RAP1 +synonym: "Rap1" EXACT [] +xref: NEXTPROT-FAMILY:04773 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:9855 ! RAP1A +relationship: inverse_is_a HGNC:9857 ! RAP1B + +[Term] +id: FPLX:000402 +name: RAPGEF +synonym: "Rap guanine nucleotide exchange factor" EXACT [] +synonym: "Rap guanine nucleotide exchange factors" EXACT [] +synonym: "RapGEFs" EXACT [] +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:4568 ! RAPGEF1 +relationship: inverse_is_a HGNC:16854 ! RAPGEF2 + +[Term] +id: FPLX:000403 +name: RAR +synonym: "RAR" EXACT [] +synonym: "retinoic acid receptors" EXACT [] +xref: BEL:"RAR Family" +xref: NCIT:C17532 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:9864 ! RARA +relationship: inverse_is_a HGNC:9865 ! RARB +relationship: inverse_is_a HGNC:9866 ! RARG + +[Term] +id: FPLX:000404 +name: RAS +synonym: "Ras GTPase" EXACT [] +synonym: "RAS" EXACT [] +synonym: "Ras" EXACT [] +xref: BEL:"RAS Family" +xref: MEDSCAN:urn:agi-aopfc:0000465 +xref: NCIT:C17061 +xref: NEXTPROT-FAMILY:03663 +xref: XFAM:PF00071 +xref: RE:R-HSA-109782 +xref: RE:R-HSA-109783 +xref: RE:R-HSA-109796 +xref: RE:R-HSA-167204 +xref: RE:R-HSA-6802607 +xref: RE:R-HSA-6802608 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:6407 ! KRAS +relationship: inverse_is_a HGNC:5173 ! HRAS +relationship: inverse_is_a HGNC:7989 ! NRAS + +[Term] +id: FPLX:000405 +name: RASA +synonym: "RASA" EXACT [] +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:9871 ! RASA1 +relationship: inverse_is_a HGNC:9872 ! RASA2 +relationship: inverse_is_a HGNC:20331 ! RASA3 + +[Term] +id: FPLX:000406 +name: RASAL +synonym: "RASAL" EXACT [] +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:9873 ! RASAL1 +relationship: inverse_is_a HGNC:9874 ! RASAL2 +relationship: inverse_is_a HGNC:26129 ! RASAL3 + +[Term] +id: FPLX:000407 +name: RasGAP +synonym: "RasGAP" EXACT [] +synonym: "RasGAPs" EXACT [] +xref: XFAM:PF00616 +xref: RE:R-HSA-5658216 +is_a: FPLX:000000 ! famplex + +[Term] +id: FPLX:000408 +name: RASGRF +synonym: "RASGRF" EXACT [] +xref: RE:R-HSA-442734 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:9875 ! RASGRF1 +relationship: inverse_is_a HGNC:9876 ! RASGRF2 + +[Term] +id: FPLX:000409 +name: RASGRP +synonym: "RASGRP" EXACT [] +xref: RE:R-HSA-2685656 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:9878 ! RASGRP1 +relationship: inverse_is_a HGNC:9879 ! RASGRP2 +relationship: inverse_is_a HGNC:14545 ! RASGRP3 +relationship: inverse_is_a HGNC:18958 ! RASGRP4 + +[Term] +id: FPLX:000410 +name: RASSF +synonym: "RAS association domain family" EXACT [] +synonym: "Ras association domain family" EXACT [] +synonym: "RAS-association domain family" EXACT [] +synonym: "Ras-association domain family" EXACT [] +synonym: "RASSF family" EXACT [] +xref: IP:IPR033614 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:9882 ! RASSF1 +relationship: inverse_is_a HGNC:9883 ! RASSF2 +relationship: inverse_is_a HGNC:14271 ! RASSF3 +relationship: inverse_is_a HGNC:20793 ! RASSF4 +relationship: inverse_is_a HGNC:17609 ! RASSF5 +relationship: inverse_is_a HGNC:20796 ! RASSF6 +relationship: inverse_is_a HGNC:1166 ! RASSF7 +relationship: inverse_is_a HGNC:13232 ! RASSF8 +relationship: inverse_is_a HGNC:15739 ! RASSF9 +relationship: inverse_is_a HGNC:33984 ! RASSF10 + +[Term] +id: FPLX:000411 +name: RFC +synonym: "DNA replication factor C complex" EXACT [] +synonym: "DNA replication factor C" EXACT [] +synonym: "replication factor C" EXACT [] +synonym: "RF-C" EXACT [] +synonym: "RFC" EXACT [] +xref: BEL:"RFC Complex" +xref: GO:0005663 +xref: MEDSCAN:urn:agi-complex:prophash-7629c2cdfdf4908b72f13917a7c1551e +xref: RE:R-HSA-174454 +xref: RE:R-HSA-68436 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:9969 ! RFC1 +relationship: has_part HGNC:9970 ! RFC2 +relationship: has_part HGNC:9971 ! RFC3 +relationship: has_part HGNC:9972 ! RFC4 +relationship: has_part HGNC:9973 ! RFC5 + +[Term] +id: FPLX:000412 +name: RFX +synonym: "regulatory family X" EXACT [] +synonym: "RF-X" EXACT [] +synonym: "RFX family" EXACT [] +synonym: "RFX proteins" EXACT [] +synonym: "RFX" EXACT [] +xref: BEL:"RFX Family" +xref: MEDSCAN:urn:agi-aopfc:0000157 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:9982 ! RFX1 +relationship: inverse_is_a HGNC:9983 ! RFX2 +relationship: inverse_is_a HGNC:9984 ! RFX3 +relationship: inverse_is_a HGNC:9985 ! RFX4 +relationship: inverse_is_a HGNC:9986 ! RFX5 +relationship: inverse_is_a HGNC:21478 ! RFX6 +relationship: inverse_is_a HGNC:25777 ! RFX7 +relationship: inverse_is_a HGNC:37253 ! RFX8 + +[Term] +id: FPLX:000413 +name: RGL +synonym: "RAL guanine nucleotide dissociation stimulator like" EXACT [] +synonym: "Ral guanine nucleotide dissociation stimulator like" EXACT [] +synonym: "ral guanine nucleotide dissociation stimulator like" EXACT [] +synonym: "RALGDS-like" EXACT [] +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:30281 ! RGL1 +relationship: inverse_is_a HGNC:9769 ! RGL2 +relationship: inverse_is_a HGNC:30282 ! RGL3 + +[Term] +id: FPLX:000414 +name: RHO +synonym: "Rho family" EXACT [] +synonym: "RHO" EXACT [] +xref: BEL:"RHO Family" +xref: MEDSCAN:urn:agi-aopfc:0000499 +xref: NEXTPROT-FAMILY:03668 +xref: RE:R-HSA-419160 +xref: RE:R-HSA-419161 +xref: RE:R-HSA-419164 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:667 ! RHOA +relationship: inverse_is_a HGNC:668 ! RHOB +relationship: inverse_is_a HGNC:669 ! RHOC + +[Term] +id: FPLX:000415 +name: RhoGDI +synonym: "Rho-GDI" EXACT [] +synonym: "RHOGDI" EXACT [] +synonym: "RhoGDI" EXACT [] +synonym: "rhoGDI" EXACT [] +synonym: "RhoGDIs" EXACT [] +xref: GO:0005094 +xref: IP:IPR000406 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:678 ! ARHGDIA +relationship: inverse_is_a HGNC:679 ! ARHGDIB +relationship: inverse_is_a HGNC:680 ! ARHGDIG + +[Term] +id: FPLX:000416 +name: RNApo-I +synonym: "Pol I" EXACT [] +synonym: "RNA polymerase 1" EXACT [] +synonym: "RNA polymerase I" EXACT [] +xref: BEL:"RNApo I Complex" +xref: GO:0005736 +xref: NCIT:C95947 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:17264 ! POLR1A +relationship: has_part HGNC:20454 ! POLR1B +relationship: has_part HGNC:20194 ! POLR1C +relationship: has_part HGNC:20422 ! POLR1D + +[Term] +id: FPLX:000417 +name: RNApo-II +synonym: "RNA polymerase II" EXACT [] +synonym: "RNAP II" EXACT [] +xref: BEL:"RNApo II Complex" +xref: GO:0005665 +xref: MEDSCAN:urn:agi-complex:prophash-d9fbae788d60df23b6be4a3ead2cbab4 +xref: NCIT:C95948 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:9187 ! POLR2A +relationship: has_part HGNC:9188 ! POLR2B +relationship: has_part HGNC:9189 ! POLR2C +relationship: has_part HGNC:9191 ! POLR2D +relationship: has_part HGNC:9192 ! POLR2E +relationship: has_part HGNC:9193 ! POLR2F +relationship: has_part HGNC:9194 ! POLR2G +relationship: has_part HGNC:9195 ! POLR2H +relationship: has_part HGNC:9196 ! POLR2I +relationship: has_part HGNC:9197 ! POLR2J +relationship: has_part HGNC:23208 ! POLR2J2 +relationship: has_part HGNC:9198 ! POLR2K +relationship: has_part HGNC:9199 ! POLR2L + +[Term] +id: FPLX:000418 +name: ROBO +xref: SIGNOR:SIGNOR-PF14 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:10249 ! ROBO1 +relationship: inverse_is_a HGNC:10250 ! ROBO2 +relationship: inverse_is_a HGNC:13433 ! ROBO3 + +[Term] +id: FPLX:000419 +name: ROCK +synonym: "ROCK" EXACT [] +xref: BEL:"ROCK Family" +xref: IP:IPR015008 +xref: IP:IPR020684 +xref: RE:R-HSA-419057 +xref: RE:R-HSA-4687776 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:10251 ! ROCK1 +relationship: inverse_is_a HGNC:10252 ! ROCK2 + +[Term] +id: FPLX:000420 +name: ROR +synonym: "receptor tyrosine kinase-like orphan receptor" EXACT [] +synonym: "receptor tyrosine kinase-like orphan receptors" EXACT [] +synonym: "ROR" EXACT [] +synonym: "RORs" EXACT [] +xref: BEL:"ROR Family" +xref: IP:IPR016247 +xref: MEDSCAN:urn:agi-aopfc:0000286 +xref: NEXTPROT-FAMILY:03130 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:10256 ! ROR1 +relationship: inverse_is_a HGNC:10257 ! ROR2 + +[Term] +id: FPLX:000421 +name: RPA +synonym: "Replication protein A" EXACT [] +synonym: "replication protein A" EXACT [] +synonym: "RPA" EXACT [] +xref: RE:R-HSA-68462 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:10289 ! RPA1 +relationship: has_part HGNC:10290 ! RPA2 +relationship: has_part HGNC:10291 ! RPA3 + +[Term] +id: FPLX:000422 +name: RSK +synonym: "RSK" EXACT [] +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a FPLX:000329 ! P90RSK +relationship: inverse_is_a FPLX:000328 ! P70S6K + +[Term] +id: FPLX:000423 +name: RTK +synonym: "RTKs" EXACT [] +xref: NCIT:C17660 +is_a: FPLX:000000 ! famplex + +[Term] +id: FPLX:000424 +name: RXR +synonym: "retinoid X receptors" EXACT [] +synonym: "retinoid-X receptor" EXACT [] +synonym: "RXR" EXACT [] +xref: BEL:"RXR Family" +xref: GO:0004886 +xref: MEDSCAN:urn:agi-complex:prophash-bd459ca2937257c9e3f2b75abf22f422 +xref: NCIT:C17534 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:10477 ! RXRA +relationship: inverse_is_a HGNC:10478 ! RXRB +relationship: inverse_is_a HGNC:10479 ! RXRG + +[Term] +id: FPLX:000425 +name: S100 +synonym: "S100" EXACT [] +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a FPLX:000426 ! S100A +relationship: inverse_is_a HGNC:10500 ! S100B +relationship: inverse_is_a HGNC:1436 ! S100G +relationship: inverse_is_a HGNC:10504 ! S100P +relationship: inverse_is_a HGNC:30367 ! S100Z + +[Term] +id: FPLX:000426 +name: S100A +synonym: "S100A" EXACT [] +synonym: "S100a" EXACT [] +xref: BEL:"S100A Family" +is_a: FPLX:000425 ! S100 +relationship: inverse_is_a HGNC:20846 ! HRNR +relationship: inverse_is_a HGNC:10486 ! S100A1 +relationship: inverse_is_a HGNC:10487 ! S100A10 +relationship: inverse_is_a HGNC:10488 ! S100A11 +relationship: inverse_is_a HGNC:10489 ! S100A12 +relationship: inverse_is_a HGNC:10490 ! S100A13 +relationship: inverse_is_a HGNC:18901 ! S100A14 +relationship: inverse_is_a HGNC:20441 ! S100A16 +relationship: inverse_is_a HGNC:10492 ! S100A2 +relationship: inverse_is_a HGNC:10493 ! S100A3 +relationship: inverse_is_a HGNC:10494 ! S100A4 +relationship: inverse_is_a HGNC:10495 ! S100A5 +relationship: inverse_is_a HGNC:10496 ! S100A6 +relationship: inverse_is_a HGNC:10497 ! S100A7 +relationship: inverse_is_a HGNC:21657 ! S100A7A +relationship: inverse_is_a HGNC:10498 ! S100A8 +relationship: inverse_is_a HGNC:10499 ! S100A9 +relationship: inverse_is_a HGNC:31796 ! TCHHL1 + +[Term] +id: FPLX:000427 +name: S1PR +synonym: "S1P receptor" EXACT [] +synonym: "S1PR" EXACT [] +synonym: "Sphingosine 1-phosphate receptor" EXACT [] +synonym: "sphingosine-1-phosphate receptors" EXACT [] +xref: BEL:"S1PR Family" +xref: GO:0038036 +xref: IP:IPR004061 +xref: RE:R-HSA-419346 +xref: RE:R-HSA-419401 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:3165 ! S1PR1 +relationship: inverse_is_a HGNC:3169 ! S1PR2 +relationship: inverse_is_a HGNC:3167 ! S1PR3 +relationship: inverse_is_a HGNC:3170 ! S1PR4 +relationship: inverse_is_a HGNC:14299 ! S1PR5 + +[Term] +id: FPLX:000428 +name: SAA +synonym: "SAA" EXACT [] +xref: BEL:"SAA Family" +xref: IP:IPR000096 +xref: NEXTPROT-FAMILY:03483 +xref: XFAM:PF00277 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:10513 ! SAA1 +relationship: inverse_is_a HGNC:10514 ! SAA2 +relationship: inverse_is_a HGNC:10516 ! SAA4 + +[Term] +id: FPLX:000429 +name: SCD +synonym: "stearoyl-CoA 9-desaturase" EXACT [] +synonym: "Stearoyl-CoA desaturase" EXACT [] +synonym: "stearoyl-CoA desaturase" EXACT [] +xref: BEL:"SCD Family" +xref: ECCODE:1.14.19.1 +xref: IP:IPR001522 +xref: IP:IPR015876 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:10571 ! SCD +relationship: inverse_is_a HGNC:21088 ! SCD5 + +[Term] +id: FPLX:000430 +name: SERCA +synonym: "sarcoplasmic/endoplasmic reticulum calcium ATPase" EXACT [] +synonym: "SERCA" EXACT [] +synonym: "SERCAs" EXACT [] +synonym: "SR Ca(2+)-ATPase" EXACT [] +xref: BEL:"ATP2A Family" +xref: IP:IPR005782 +xref: MEDSCAN:urn:agi-protfc:sarcoplasmic%20reticulum%20calcium%20transporting%20adenosine%20triphosphatase +xref: RE:R-HSA-418312 +xref: RE:R-HSA-427905 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:811 ! ATP2A1 +relationship: inverse_is_a HGNC:812 ! ATP2A2 +relationship: inverse_is_a HGNC:813 ! ATP2A3 + +[Term] +id: FPLX:000431 +name: SERPINB +synonym: "Clade B serpin" EXACT [] +synonym: "clade B serpins" EXACT [] +synonym: "ov-serpins" EXACT [] +xref: BEL:"SERPINB Family" +xref: NEXTPROT-FAMILY:03579 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:3311 ! SERPINB1 +relationship: inverse_is_a HGNC:8584 ! SERPINB2 +relationship: inverse_is_a HGNC:10569 ! SERPINB3 +relationship: inverse_is_a HGNC:10570 ! SERPINB4 +relationship: inverse_is_a HGNC:8949 ! SERPINB5 +relationship: inverse_is_a HGNC:8950 ! SERPINB6 +relationship: inverse_is_a HGNC:13902 ! SERPINB7 +relationship: inverse_is_a HGNC:8952 ! SERPINB8 +relationship: inverse_is_a HGNC:8955 ! SERPINB9 +relationship: inverse_is_a HGNC:8942 ! SERPINB10 +relationship: inverse_is_a HGNC:14221 ! SERPINB11 +relationship: inverse_is_a HGNC:14220 ! SERPINB12 +relationship: inverse_is_a HGNC:8944 ! SERPINB13 + +[Term] +id: FPLX:000432 +name: SHC +synonym: "Shc family" EXACT [] +synonym: "SHC" EXACT [] +synonym: "Shc" EXACT [] +xref: IP:IPR006019 +xref: MEDSCAN:urn:agi-protfc:shc%20protein +xref: RE:R-HSA-167023 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:10840 ! SHC1 +relationship: inverse_is_a HGNC:29869 ! SHC2 +relationship: inverse_is_a HGNC:18181 ! SHC3 +relationship: inverse_is_a HGNC:16743 ! SHC4 + +[Term] +id: FPLX:000433 +name: SIK +synonym: "SIK" EXACT [] +synonym: "salt inducible kinase" EXACT [] +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:11142 ! SIK1 +relationship: inverse_is_a HGNC:21680 ! SIK2 +relationship: inverse_is_a HGNC:29165 ! SIK3 + +[Term] +id: FPLX:000434 +name: SLC2A +synonym: "glucose transporter" EXACT [] +synonym: "glucose transporters" EXACT [] +synonym: "GLUT" EXACT [] +synonym: "SLC2" EXACT [] +xref: BEL:"SLC2A Family" +xref: GO:0005355 +xref: NEXTPROT-FAMILY:02159 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:11005 ! SLC2A1 +relationship: inverse_is_a HGNC:11006 ! SLC2A2 +relationship: inverse_is_a HGNC:11007 ! SLC2A3 +relationship: inverse_is_a HGNC:11009 ! SLC2A4 +relationship: inverse_is_a HGNC:11010 ! SLC2A5 +relationship: inverse_is_a HGNC:11011 ! SLC2A6 +relationship: inverse_is_a HGNC:13445 ! SLC2A7 +relationship: inverse_is_a HGNC:13812 ! SLC2A8 +relationship: inverse_is_a HGNC:13446 ! SLC2A9 +relationship: inverse_is_a HGNC:13444 ! SLC2A10 +relationship: inverse_is_a HGNC:14239 ! SLC2A11 +relationship: inverse_is_a HGNC:18067 ! SLC2A12 +relationship: inverse_is_a HGNC:18301 ! SLC2A14 + +[Term] +id: FPLX:000435 +name: SLRP +synonym: "SLRP" EXACT [] +synonym: "SLRPs" EXACT [] +synonym: "SLRR" EXACT [] +synonym: "SLRRs" EXACT [] +synonym: "small leucine rich proteoglycan family" EXACT [] +synonym: "small leucine rich proteoglycan" EXACT [] +synonym: "small leucine rich proteoglycans" EXACT [] +synonym: "small leucine-rich proteoglycan family" EXACT [] +synonym: "small leucine-rich proteoglycan" EXACT [] +synonym: "small leucine-rich proteoglycans" EXACT [] +xref: NEXTPROT-FAMILY:03672 +xref: SIGNOR:SIGNOR-PF31 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a FPLX:000436 ! SLRP_1 +relationship: inverse_is_a FPLX:000437 ! SLRP_2 +relationship: inverse_is_a FPLX:000438 ! SLRP_3 +relationship: inverse_is_a FPLX:000439 ! SLRP_4 +relationship: inverse_is_a FPLX:000440 ! SLRP_5 + +[Term] +id: FPLX:000436 +name: SLRP-1 +xref: NEXTPROT-FAMILY:03673 +is_a: FPLX:000435 ! SLRP +relationship: inverse_is_a HGNC:1044 ! BGN +relationship: inverse_is_a HGNC:2705 ! DCN +relationship: inverse_is_a HGNC:14872 ! ASPN +relationship: inverse_is_a HGNC:3154 ! ECM2 + +[Term] +id: FPLX:000437 +name: SLRP-2 +xref: NEXTPROT-FAMILY:03674 +is_a: FPLX:000435 ! SLRP +relationship: inverse_is_a HGNC:3774 ! FMOD +relationship: inverse_is_a HGNC:6724 ! LUM +relationship: inverse_is_a HGNC:9357 ! PRELP +relationship: inverse_is_a HGNC:6309 ! KERA +relationship: inverse_is_a HGNC:8134 ! OMD + +[Term] +id: FPLX:000438 +name: SLRP-3 +xref: NEXTPROT-FAMILY:03675 +is_a: FPLX:000435 ! SLRP +relationship: inverse_is_a HGNC:3053 ! EPYC +relationship: inverse_is_a HGNC:8158 ! OPTC +relationship: inverse_is_a HGNC:8126 ! OGN + +[Term] +id: FPLX:000439 +name: SLRP-4 +xref: NEXTPROT-FAMILY:03676 +is_a: FPLX:000435 ! SLRP +relationship: inverse_is_a HGNC:1909 ! CHAD +relationship: inverse_is_a HGNC:8082 ! NYX +relationship: inverse_is_a HGNC:28850 ! TSKU + +[Term] +id: FPLX:000440 +name: SLRP-5 +xref: NEXTPROT-FAMILY:03677 +is_a: FPLX:000435 ! SLRP +relationship: inverse_is_a HGNC:23174 ! PODN +relationship: inverse_is_a HGNC:26275 ! PODNL1 + +[Term] +id: FPLX:000441 +name: SMAD +synonym: "SMAD" EXACT [] +synonym: "Smad" EXACT [] +synonym: "smad" EXACT [] +xref: BEL:"SMAD Family" +xref: IP:IPR001132 +xref: IP:IPR013019 +xref: IP:IPR013790 +xref: MEDSCAN:urn:agi-aopfc:0000159 +xref: MEDSCAN:urn:agi-complex:prophash-72ef5fc0ab431a39e0e2915bf55b6e28 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:6767 ! SMAD1 +relationship: inverse_is_a HGNC:6770 ! SMAD4 +relationship: inverse_is_a HGNC:6771 ! SMAD5 +relationship: inverse_is_a HGNC:6772 ! SMAD6 +relationship: inverse_is_a HGNC:6773 ! SMAD7 +relationship: inverse_is_a HGNC:6774 ! SMAD9 +relationship: inverse_is_a FPLX:000443 ! SMAD2_3 +relationship: inverse_is_a FPLX:000442 ! SMAD1_5_9 + +[Term] +id: FPLX:000442 +name: SMAD1-5-9 +xref: SIGNOR:SIGNOR-PF35 +is_a: FPLX:000441 ! SMAD +relationship: inverse_is_a HGNC:6767 ! SMAD1 +relationship: inverse_is_a HGNC:6771 ! SMAD5 +relationship: inverse_is_a HGNC:6774 ! SMAD9 + +[Term] +id: FPLX:000443 +name: SMAD2-3 +synonym: "SMAD 2/3" EXACT [] +synonym: "SMAD2/3" EXACT [] +synonym: "Smad2/3" EXACT [] +xref: MEDSCAN:urn:agi-complex:SMAD2%2f3 +xref: RE:R-HSA-171172 +xref: RE:R-HSA-171182 +xref: RE:R-HSA-177105 +xref: RE:R-HSA-2176482 +xref: RE:R-HSA-2187329 +xref: RE:R-HSA-2187387 +is_a: FPLX:000441 ! SMAD +relationship: inverse_is_a HGNC:6768 ! SMAD2 +relationship: inverse_is_a HGNC:6769 ! SMAD3 + +[Term] +id: FPLX:000444 +name: SMC1 +synonym: "SMC1" EXACT [] +synonym: "Smc1" EXACT [] +xref: BEL:"SMC1 Family" +xref: NEXTPROT-FAMILY:03686 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:11111 ! SMC1A +relationship: inverse_is_a HGNC:11112 ! SMC1B + +[Term] +id: FPLX:000445 +name: SMURF +xref: SIGNOR:SIGNOR-PF29 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:16807 ! SMURF1 +relationship: inverse_is_a HGNC:16809 ! SMURF2 + +[Term] +id: FPLX:000446 +name: SNAI +synonym: "SNAI family" EXACT [] +synonym: "SNAI" EXACT [] +xref: BEL:"SNAI Family" +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:11128 ! SNAI1 +relationship: inverse_is_a HGNC:11094 ! SNAI2 +relationship: inverse_is_a HGNC:18411 ! SNAI3 + +[Term] +id: FPLX:000447 +name: SOD +synonym: "SOD" EXACT [] +xref: BEL:"Cu-Zn SOD Family" +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:11179 ! SOD1 +relationship: inverse_is_a HGNC:11180 ! SOD2 +relationship: inverse_is_a HGNC:11181 ! SOD3 + +[Term] +id: FPLX:000448 +name: SOS +synonym: "SOS" EXACT [] +xref: BEL:"SOS Family" +xref: RE:R-HSA-167215 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:11187 ! SOS1 +relationship: inverse_is_a HGNC:11188 ! SOS2 + +[Term] +id: FPLX:000449 +name: SPRED +synonym: "SPRED" EXACT [] +xref: IP:IPR023337 +xref: RE:R-HSA-5658219 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:20249 ! SPRED1 +relationship: inverse_is_a HGNC:17722 ! SPRED2 +relationship: inverse_is_a HGNC:31041 ! SPRED3 + +[Term] +id: FPLX:000450 +name: SPRY +synonym: "SPRY" EXACT [] +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:11269 ! SPRY1 +relationship: inverse_is_a HGNC:11270 ! SPRY2 +relationship: inverse_is_a HGNC:11271 ! SPRY3 +relationship: inverse_is_a HGNC:15533 ! SPRY4 + +[Term] +id: FPLX:000451 +name: SRC +synonym: "SFK" EXACT [] +synonym: "Src family kinase" EXACT [] +synonym: "Src family" EXACT [] +synonym: "src kinases" EXACT [] +synonym: "SRC-family kinases" EXACT [] +synonym: "Src-kinases" EXACT [] +xref: BEL:"SRC Family" +xref: MEDSCAN:urn:agi-aopfc:0000509 +xref: NEXTPROT-FAMILY:03131 +xref: SIGNOR:SIGNOR-PF32 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:3697 ! FGR +relationship: inverse_is_a HGNC:4037 ! FYN +relationship: inverse_is_a HGNC:11283 ! SRC +relationship: inverse_is_a HGNC:12841 ! YES1 + +[Term] +id: FPLX:000452 +name: SREBF +synonym: "SREBF family" EXACT [] +synonym: "SREBF" EXACT [] +synonym: "sterol regulatory element binding protein" EXACT [] +synonym: "sterol regulatory element-binding factor" EXACT [] +xref: BEL:"SREBF Family" +xref: MEDSCAN:urn:agi-protfc:sterol%20regulatory%20element%20binding%20protein +xref: RE:R-HSA-1655720 +xref: RE:R-HSA-1655725 +xref: RE:R-HSA-1655726 +xref: RE:R-HSA-1655730 +xref: RE:R-HSA-1655732 +xref: RE:R-HSA-1655734 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:11289 ! SREBF1 +relationship: inverse_is_a HGNC:11290 ! SREBF2 + +[Term] +id: FPLX:000453 +name: STAT +synonym: "STAT" EXACT [] +synonym: "STATs" EXACT [] +xref: BEL:"STAT Family" +xref: IP:IPR001217 +xref: IP:IPR012345 +xref: IP:IPR013799 +xref: IP:IPR013800 +xref: IP:IPR013801 +xref: IP:IPR015988 +xref: MEDSCAN:urn:agi-aopfc:0000163 +xref: MEDSCAN:urn:agi-complex:prophash-2de597c3f4a807f3caeaf02e5f93ce15 +xref: NCIT:C19618 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:11362 ! STAT1 +relationship: inverse_is_a HGNC:11363 ! STAT2 +relationship: inverse_is_a HGNC:11364 ! STAT3 +relationship: inverse_is_a HGNC:11365 ! STAT4 +relationship: inverse_is_a HGNC:11368 ! STAT6 +relationship: inverse_is_a FPLX:000454 ! STAT5 + +[Term] +id: FPLX:000454 +name: STAT5 +synonym: "STAT5" EXACT [] +synonym: "Stat5" EXACT [] +xref: BEL:"STAT5 Family" +xref: MEDSCAN:urn:agi-protfc:STAT5%20protein +xref: RE:R-HSA-1469978 +xref: RE:R-HSA-452094 +xref: RE:R-HSA-507919 +xref: RE:R-HSA-507929 +xref: RE:R-HSA-508012 +xref: RE:R-HSA-8865622 +is_a: FPLX:000453 ! STAT +relationship: inverse_is_a HGNC:11366 ! STAT5A +relationship: inverse_is_a HGNC:11367 ! STAT5B + +[Term] +id: FPLX:000455 +name: STT3 +synonym: "STT3" EXACT [] +is_a: FPLX:000198 ! Glycosyltransferase +relationship: inverse_is_a HGNC:6172 ! STT3A +relationship: inverse_is_a HGNC:30611 ! STT3B + +[Term] +id: FPLX:000456 +name: Sulfonylurea-receptor +synonym: "Sulfonylurea Receptor" EXACT [] +synonym: "sulfonylurea receptor" EXACT [] +synonym: "sulfonylurea receptors" EXACT [] +synonym: "SUR" EXACT [] +xref: BEL:"Sulfonylurea Receptor Family" +xref: GO:0008281 +xref: IP:IPR000388 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:59 ! ABCC8 +relationship: inverse_is_a HGNC:60 ! ABCC9 + +[Term] +id: FPLX:000457 +name: SWI-SNF +synonym: "SWI and SNF complex" EXACT [] +synonym: "SWI/SNF complex" EXACT [] +synonym: "SWI/SNF" EXACT [] +synonym: "SWI/SNF-like" EXACT [] +xref: BEL:"SWI/SNF Complex" +xref: MEDSCAN:urn:agi-complex:prophash-f7a9dc05e48afd7a93466cfbd5504861 +xref: MEDSCAN:urn:agi-protfc:chromatin%20remodeling%20complex +xref: MEDSCAN:urn:agi-protfc:SWI%2fSNF%20family +xref: NCIT:C20591 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:11110 ! ARID1A +relationship: has_part HGNC:18040 ! ARID1B +relationship: has_part HGNC:11097 ! SMARCA1 +relationship: has_part HGNC:11098 ! SMARCA2 +relationship: has_part HGNC:11100 ! SMARCA4 +relationship: has_part HGNC:11101 ! SMARCA5 +relationship: has_part HGNC:11103 ! SMARCB1 +relationship: has_part HGNC:11104 ! SMARCC1 +relationship: has_part HGNC:11105 ! SMARCC2 +relationship: has_part HGNC:11106 ! SMARCD1 +relationship: has_part HGNC:11107 ! SMARCD2 +relationship: has_part HGNC:11108 ! SMARCD3 +relationship: has_part HGNC:11109 ! SMARCE1 +relationship: has_part HGNC:24124 ! ACTL6A +relationship: has_part HGNC:160 ! ACTL6B +relationship: has_part HGNC:11099 ! HLTF + +[Term] +id: FPLX:000458 +name: TAOK +xref: SIGNOR:SIGNOR-PF21 +is_a: FPLX:000282 ! MAP3K +relationship: inverse_is_a HGNC:29259 ! TAOK1 +relationship: inverse_is_a HGNC:16835 ! TAOK2 +relationship: inverse_is_a HGNC:18133 ! TAOK3 + +[Term] +id: FPLX:000459 +name: TAP +synonym: "TAP transporter" EXACT [] +synonym: "TAP" EXACT [] +xref: BEL:"TAP Family" +xref: GO:0042825 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:43 ! TAP1 +relationship: inverse_is_a HGNC:44 ! TAP2 +relationship: inverse_is_a HGNC:50 ! ABCB9 + +[Term] +id: FPLX:000460 +name: TCF-LEF +synonym: "T-cell factor (TCF)/lymphoid enhancer factor" EXACT [] +synonym: "TCF" EXACT [] +synonym: "Tcf" EXACT [] +synonym: "Tcf/Lef" EXACT [] +xref: BEL:"TCF/LEF Family" +xref: IP:IPR013558 +xref: IP:IPR024940 +xref: NEXTPROT-FAMILY:03943 +xref: RE:R-HSA-3299546 +xref: RE:R-HSA-5323539 +xref: RE:R-HSA-8944354 +xref: RE:R-HSA-8951427 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:6551 ! LEF1 +relationship: inverse_is_a HGNC:11639 ! TCF7 +relationship: inverse_is_a HGNC:11640 ! TCF7L1 +relationship: inverse_is_a HGNC:11641 ! TCF7L2 + +[Term] +id: FPLX:000461 +name: TCR +synonym: "TCR" EXACT [] +xref: MESH:D011948 +xref: NCIT:C17065 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:12027 ! TRA +relationship: has_part HGNC:12155 ! TRB +relationship: has_part HGNC:12252 ! TRD +relationship: has_part HGNC:12271 ! TRG + +[Term] +id: FPLX:000462 +name: TEAD +xref: SIGNOR:SIGNOR-PF22 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:11714 ! TEAD1 +relationship: inverse_is_a HGNC:11715 ! TEAD2 +relationship: inverse_is_a HGNC:11716 ! TEAD3 +relationship: inverse_is_a HGNC:11717 ! TEAD4 + +[Term] +id: FPLX:000463 +name: TFAP2 +synonym: "AP-2 transcription factor" EXACT [] +synonym: "Transcription factor AP-2" EXACT [] +synonym: "transcription factor AP-2" EXACT [] +xref: BEL:"TFAP2 Family" +xref: IP:IPR004979 +xref: IP:IPR013854 +xref: NEXTPROT-FAMILY:00209 +xref: RE:R-HSA-8864283 +xref: RE:R-HSA-8864286 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:11742 ! TFAP2A +relationship: inverse_is_a HGNC:11743 ! TFAP2B +relationship: inverse_is_a HGNC:11744 ! TFAP2C +relationship: inverse_is_a HGNC:15581 ! TFAP2D +relationship: inverse_is_a HGNC:30774 ! TFAP2E + +[Term] +id: FPLX:000464 +name: TFDP +synonym: "DP complex" EXACT [] +synonym: "TFDP" EXACT [] +synonym: "transcription factor DP" EXACT [] +xref: BEL:"TFDP Family" +xref: RE:R-HSA-1362227 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:11749 ! TFDP1 +relationship: inverse_is_a HGNC:11751 ! TFDP2 + +[Term] +id: FPLX:000465 +name: TGFB +synonym: "TGF beta" EXACT [] +synonym: "TGF β" EXACT [] +synonym: "TGF-b" EXACT [] +synonym: "TGF-beta family" EXACT [] +synonym: "TGF-beta" EXACT [] +synonym: "TGF-β" EXACT [] +synonym: "TGFB family" EXACT [] +synonym: "TGFB" EXACT [] +synonym: "TGFbeta" EXACT [] +synonym: "TGFβ" EXACT [] +synonym: "transforming growth factor beta" EXACT [] +synonym: "transforming growth factor β" EXACT [] +synonym: "transforming growth factor-beta" EXACT [] +synonym: "transforming growth factor-β" EXACT [] +xref: BEL:"TGFB Family" +xref: IP:IPR015615 +xref: IP:IPR016319 +xref: MEDSCAN:urn:agi-aopfc:0000423 +xref: NEXTPROT-FAMILY:03989 +xref: RE:R-HSA-114657 +xref: RE:R-HSA-2395330 +xref: SIGNOR:SIGNOR-PF5 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:11766 ! TGFB1 +relationship: inverse_is_a HGNC:11768 ! TGFB2 +relationship: inverse_is_a HGNC:11769 ! TGFB3 + +[Term] +id: FPLX:000466 +name: TGFBR +synonym: "TGF beta receptor" EXACT [] +synonym: "TGF β receptor" EXACT [] +synonym: "TGF-beta receptor" EXACT [] +synonym: "TGF-beta receptors" EXACT [] +synonym: "TGF-β receptor" EXACT [] +synonym: "TGF-β receptors" EXACT [] +synonym: "TGFBR family" EXACT [] +synonym: "TGFBR" EXACT [] +synonym: "TGFβ receptor" EXACT [] +synonym: "TGFβ receptors" EXACT [] +xref: MEDSCAN:urn:agi-aopfc:0000294 +xref: MEDSCAN:urn:agi-complex:prophash-9e456bf1de2c5eb1107156c96a1450e6 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:11772 ! TGFBR1 +relationship: inverse_is_a HGNC:11773 ! TGFBR2 +relationship: inverse_is_a HGNC:11774 ! TGFBR3 + +[Term] +id: FPLX:000467 +name: THBS +synonym: "thrombospondin protein" EXACT [] +synonym: "Thrombospondin" EXACT [] +synonym: "thrombospondin" EXACT [] +synonym: "Thrombospondins" EXACT [] +synonym: "thrombospondins" EXACT [] +xref: BEL:"THBS Family" +xref: IP:IPR003367 +xref: IP:IPR008859 +xref: IP:IPR017897 +xref: IP:IPR028974 +xref: MEDSCAN:urn:agi-protfc:thrombospondins +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:11785 ! THBS1 +relationship: inverse_is_a HGNC:11786 ! THBS2 +relationship: inverse_is_a HGNC:11787 ! THBS3 +relationship: inverse_is_a HGNC:11788 ! THBS4 +relationship: inverse_is_a HGNC:2227 ! COMP + +[Term] +id: FPLX:000468 +name: THR +synonym: "thyroid hormone receptor" EXACT [] +xref: BEL:"THR Family" +xref: NCIT:C17078 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:11796 ! THRA +relationship: inverse_is_a HGNC:11799 ! THRB + +[Term] +id: FPLX:000469 +name: Thrombin-antithrombin +synonym: "thrombin-anti-thrombin III complexes" EXACT [] +xref: BEL:"Thrombin Antithrombin Complex" +xref: RE:R-HSA-140812 +xref: RE:R-HSA-140871 +xref: RE:R-HSA-140874 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:3535 ! F2 +relationship: has_part HGNC:775 ! SERPINC1 + +[Term] +id: FPLX:000470 +name: TIAM +synonym: "TIAM" EXACT [] +xref: NEXTPROT-FAMILY:04014 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:11805 ! TIAM1 +relationship: inverse_is_a HGNC:11806 ! TIAM2 + +[Term] +id: FPLX:000471 +name: TIF-IB +synonym: "TIF-IB" EXACT [] +xref: BEL:"TIF IB Complex" +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:11532 ! TAF1A +relationship: has_part HGNC:11533 ! TAF1B +relationship: has_part HGNC:11534 ! TAF1C +relationship: has_part HGNC:11588 ! TBP + +[Term] +id: FPLX:000472 +name: TLR +synonym: "TLR" EXACT [] +xref: MEDSCAN:urn:agi-aopfc:0000296 +xref: SIGNOR:SIGNOR-PF20 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:11847 ! TLR1 +relationship: inverse_is_a HGNC:11848 ! TLR2 +relationship: inverse_is_a HGNC:11849 ! TLR3 +relationship: inverse_is_a HGNC:11850 ! TLR4 +relationship: inverse_is_a HGNC:11851 ! TLR5 +relationship: inverse_is_a HGNC:16711 ! TLR6 +relationship: inverse_is_a HGNC:15631 ! TLR7 +relationship: inverse_is_a HGNC:15632 ! TLR8 +relationship: inverse_is_a HGNC:15633 ! TLR9 +relationship: inverse_is_a HGNC:15634 ! TLR10 + +[Term] +id: FPLX:000473 +name: TN +synonym: "Tenascin" EXACT [] +synonym: "tenascin" EXACT [] +xref: BEL:"TN Family" +xref: NCIT:C104676 +xref: NEXTPROT-FAMILY:03964 +xref: RE:R-HSA-2672035 +xref: RE:R-HSA-2681744 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:5318 ! TNC +relationship: inverse_is_a HGNC:22942 ! TNN +relationship: inverse_is_a HGNC:11953 ! TNR +relationship: inverse_is_a HGNC:11976 ! TNXB + +[Term] +id: FPLX:000474 +name: TNF +xref: NEXTPROT-FAMILY:04243 +xref: XFAM:PF00229 +is_a: FPLX:000000 ! famplex + +[Term] +id: FPLX:000475 +name: TNFRSF +synonym: "TNF-R superfamily" EXACT [] +synonym: "TNF-receptor family" EXACT [] +synonym: "TNFR family" EXACT [] +synonym: "TNFR subfamily" EXACT [] +synonym: "TNFR superfamily members" EXACT [] +synonym: "TNFR superfamily receptors" EXACT [] +synonym: "TNFR superfamily" EXACT [] +synonym: "TNFR" EXACT [] +xref: BEL:"TNFRSF Family" +xref: MEDSCAN:urn:agi-aopfc:0000295 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:11916 ! TNFRSF1A +relationship: inverse_is_a HGNC:11917 ! TNFRSF1B +relationship: inverse_is_a HGNC:11918 ! TNFRSF4 +relationship: inverse_is_a HGNC:11923 ! TNFRSF8 +relationship: inverse_is_a HGNC:11924 ! TNFRSF9 +relationship: inverse_is_a HGNC:11904 ! TNFRSF10A +relationship: inverse_is_a HGNC:11905 ! TNFRSF10B +relationship: inverse_is_a HGNC:11906 ! TNFRSF10C +relationship: inverse_is_a HGNC:11907 ! TNFRSF10D +relationship: inverse_is_a HGNC:11908 ! TNFRSF11A +relationship: inverse_is_a HGNC:11909 ! TNFRSF11B +relationship: inverse_is_a HGNC:18152 ! TNFRSF12A +relationship: inverse_is_a HGNC:18153 ! TNFRSF13B +relationship: inverse_is_a HGNC:17755 ! TNFRSF13C +relationship: inverse_is_a HGNC:11912 ! TNFRSF14 +relationship: inverse_is_a HGNC:11913 ! TNFRSF17 +relationship: inverse_is_a HGNC:11914 ! TNFRSF18 +relationship: inverse_is_a HGNC:11915 ! TNFRSF19 +relationship: inverse_is_a HGNC:13469 ! TNFRSF21 +relationship: inverse_is_a HGNC:11910 ! TNFRSF25 + +[Term] +id: FPLX:000476 +name: TOP2 +synonym: "topoisomerase II" EXACT [] +xref: BEL:"TOP2 Family" +xref: IP:IPR001154 +xref: IP:IPR001241 +xref: IP:IPR002205 +xref: IP:IPR012542 +xref: IP:IPR013506 +xref: IP:IPR013757 +xref: IP:IPR013758 +xref: IP:IPR013759 +xref: IP:IPR013760 +xref: IP:IPR018522 +xref: IP:IPR024946 +xref: IP:IPR031660 +xref: IP:IPR034157 +xref: NCIT:C18434 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:11989 ! TOP2A +relationship: inverse_is_a HGNC:11990 ! TOP2B + +[Term] +id: FPLX:000477 +name: Troponin +synonym: "troponin complex" EXACT [] +synonym: "troponin" EXACT [] +synonym: "troponins" EXACT [] +xref: GO:0005861 +xref: MEDSCAN:urn:agi-complex:prophash-e4ec238e69c3d3292966ac97dbc11086 +xref: RE:R-HSA-390583 +xref: RE:R-HSA-390585 +is_a: FPLX:000000 ! famplex +relationship: has_part FPLX:000478 ! Troponin_C +relationship: has_part FPLX:000479 ! Troponin_I +relationship: has_part FPLX:000480 ! Troponin_T + +[Term] +id: FPLX:000478 +name: Troponin-C +synonym: "cTnC" EXACT [] +synonym: "cTnI" EXACT [] +synonym: "TN-C" EXACT [] +synonym: "TnC" EXACT [] +synonym: "troponin C" EXACT [] +xref: RE:R-HSA-390532 +xref: RE:R-HSA-390587 +relationship: part_of FPLX:000477 ! Troponin +relationship: inverse_is_a HGNC:11943 ! TNNC1 +relationship: inverse_is_a HGNC:11944 ! TNNC2 + +[Term] +id: FPLX:000479 +name: Troponin-I +synonym: "TPNI" EXACT [] +synonym: "troponin I" EXACT [] +xref: NCIT:C17343 +xref: RE:R-HSA-390541 +relationship: part_of FPLX:000477 ! Troponin +relationship: inverse_is_a HGNC:11945 ! TNNI1 +relationship: inverse_is_a HGNC:11946 ! TNNI2 +relationship: inverse_is_a HGNC:11947 ! TNNI3 + +[Term] +id: FPLX:000480 +name: Troponin-T +synonym: "cTnT" EXACT [] +synonym: "TPNT" EXACT [] +synonym: "troponin T" EXACT [] +xref: IP:IPR027707 +xref: NCIT:C38041 +xref: RE:R-HSA-390546 +relationship: part_of FPLX:000477 ! Troponin +relationship: inverse_is_a HGNC:11948 ! TNNT1 +relationship: inverse_is_a HGNC:11949 ! TNNT2 +relationship: inverse_is_a HGNC:11950 ! TNNT3 + +[Term] +id: FPLX:000481 +name: Tryptase +synonym: "Tryptase" EXACT [] +synonym: "tryptase" EXACT [] +synonym: "tryptases" EXACT [] +xref: BEL:"Tryptase Family" +xref: ECCODE:3.4.21.59 +xref: NCIT:C120030 +xref: NEXTPROT-FAMILY:02767 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:12019 ! TPSAB1 +relationship: inverse_is_a HGNC:14120 ! TPSB2 +relationship: inverse_is_a HGNC:14118 ! TPSD1 +relationship: inverse_is_a HGNC:14134 ! TPSG1 + +[Term] +id: FPLX:000482 +name: TSC +synonym: "TSC" EXACT [] +xref: RE:R-HSA-165175 +xref: RE:R-HSA-165180 +xref: RE:R-HSA-381855 +xref: RE:R-HSA-5672337 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:12362 ! TSC1 +relationship: inverse_is_a HGNC:12363 ! TSC2 + +[Term] +id: FPLX:000483 +name: TUBA +synonym: "alpha tubulin" EXACT [] +synonym: "TUBA" EXACT [] +synonym: "tubulin alpha chain" EXACT [] +synonym: "tubulin α chain" EXACT [] +synonym: "α tubulin" EXACT [] +xref: BEL:"TUBA Family" +is_a: FPLX:000486 ! Tubulin +relationship: inverse_is_a HGNC:20766 ! TUBA1A +relationship: inverse_is_a HGNC:18809 ! TUBA1B +relationship: inverse_is_a HGNC:20768 ! TUBA1C +relationship: inverse_is_a HGNC:12408 ! TUBA3C +relationship: inverse_is_a HGNC:24071 ! TUBA3D +relationship: inverse_is_a HGNC:20765 ! TUBA3E +relationship: inverse_is_a HGNC:12407 ! TUBA4A +relationship: inverse_is_a HGNC:12410 ! TUBA8 +relationship: inverse_is_a HGNC:23534 ! TUBAL3 + +[Term] +id: FPLX:000484 +name: TUBB +synonym: "Beta Tubulin" EXACT [] +synonym: "Beta tubulin" EXACT [] +synonym: "beta Tubulin" EXACT [] +synonym: "beta tubulin" EXACT [] +synonym: "Beta-Tubulin" EXACT [] +synonym: "Beta-tubulin" EXACT [] +synonym: "beta-Tubulin" EXACT [] +synonym: "beta-tubulin" EXACT [] +synonym: "TUBB" EXACT [] +synonym: "tubulin beta chain" EXACT [] +synonym: "tubulin beta" EXACT [] +synonym: "tubulin β chain" EXACT [] +synonym: "tubulin β" EXACT [] +xref: BEL:"TUBB Family" +xref: IP:IPR002453 +xref: NCIT:C129655 +is_a: FPLX:000486 ! Tubulin +relationship: inverse_is_a HGNC:20778 ! TUBB +relationship: inverse_is_a HGNC:16257 ! TUBB1 +relationship: inverse_is_a HGNC:12412 ! TUBB2A +relationship: inverse_is_a HGNC:30829 ! TUBB2B +relationship: inverse_is_a HGNC:20772 ! TUBB3 +relationship: inverse_is_a HGNC:20774 ! TUBB4A +relationship: inverse_is_a HGNC:20771 ! TUBB4B +relationship: inverse_is_a HGNC:20776 ! TUBB6 + +[Term] +id: FPLX:000485 +name: TUBG +synonym: "Gamma tubulin" EXACT [] +synonym: "gamma tubulin" EXACT [] +synonym: "gamma-tubulin" EXACT [] +synonym: "tubulin gamma" EXACT [] +synonym: "tubulin γ" EXACT [] +synonym: "γ tubulin" EXACT [] +synonym: "γ-tubulin" EXACT [] +xref: GO:0000930 +xref: IP:IPR002454 +is_a: FPLX:000486 ! Tubulin +relationship: inverse_is_a HGNC:12417 ! TUBG1 +relationship: inverse_is_a HGNC:12419 ! TUBG2 + +[Term] +id: FPLX:000486 +name: Tubulin +synonym: "tubulin" EXACT [] +xref: MEDSCAN:urn:agi-complex:prophash-90a087d4e73b3992c65edfd9f71c6802 +xref: MEDSCAN:urn:agi-protfc:tubulin +xref: NCIT:C17219 +xref: NEXTPROT-FAMILY:04239 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a FPLX:000483 ! TUBA +relationship: inverse_is_a FPLX:000484 ! TUBB +relationship: inverse_is_a FPLX:000485 ! TUBG +relationship: inverse_is_a HGNC:16811 ! TUBD1 +relationship: inverse_is_a HGNC:20775 ! TUBE1 + +[Term] +id: FPLX:000487 +name: TXN +synonym: "Thioredoxin" EXACT [] +synonym: "thioredoxin" EXACT [] +synonym: "thioredoxins" EXACT [] +xref: BEL:"TXN Family" +xref: MEDSCAN:urn:agi-protfc:thioredoxin +xref: NEXTPROT-FAMILY:04000 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:12435 ! TXN +relationship: inverse_is_a HGNC:17772 ! TXN2 + +[Term] +id: FPLX:000488 +name: TXNRD +synonym: "Thioredoxin reductase" EXACT [] +synonym: "thioredoxin reductase" EXACT [] +xref: BEL:"TXNRD Family" +xref: IP:IPR006338 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:12437 ! TXNRD1 +relationship: inverse_is_a HGNC:18155 ! TXNRD2 +relationship: inverse_is_a HGNC:20667 ! TXNRD3 + +[Term] +id: FPLX:000489 +name: UBE2 +synonym: "E2 enzyme" EXACT [] +synonym: "E2 ubiquitin-conjugating enzyme" EXACT [] +synonym: "E2" EXACT [] +synonym: "UBE2" EXACT [] +synonym: "ubiquitin conjugating enzyme" EXACT [] +synonym: "ubiquitin-conjugating enzymes" EXACT [] +xref: BEL:"UBE2 Family" +xref: ECCODE:2.3.2.23 +xref: GO:0019787 +xref: NEXTPROT-FAMILY:04282 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:1734 ! CDC34 +relationship: inverse_is_a HGNC:12472 ! UBE2A +relationship: inverse_is_a HGNC:12473 ! UBE2B +relationship: inverse_is_a HGNC:15937 ! UBE2C +relationship: inverse_is_a HGNC:12474 ! UBE2D1 +relationship: inverse_is_a HGNC:12475 ! UBE2D2 +relationship: inverse_is_a HGNC:12476 ! UBE2D3 +relationship: inverse_is_a HGNC:21647 ! UBE2D4 +relationship: inverse_is_a HGNC:12477 ! UBE2E1 +relationship: inverse_is_a HGNC:12478 ! UBE2E2 +relationship: inverse_is_a HGNC:12479 ! UBE2E3 +relationship: inverse_is_a HGNC:12480 ! UBE2F +relationship: inverse_is_a HGNC:12482 ! UBE2G1 +relationship: inverse_is_a HGNC:12483 ! UBE2G2 +relationship: inverse_is_a HGNC:12484 ! UBE2H +relationship: inverse_is_a HGNC:12485 ! UBE2I +relationship: inverse_is_a HGNC:17598 ! UBE2J1 +relationship: inverse_is_a HGNC:19268 ! UBE2J2 +relationship: inverse_is_a HGNC:12488 ! UBE2L3 +relationship: inverse_is_a HGNC:12490 ! UBE2L6 +relationship: inverse_is_a HGNC:12491 ! UBE2M +relationship: inverse_is_a HGNC:12492 ! UBE2N +relationship: inverse_is_a HGNC:31710 ! UBE2NL +relationship: inverse_is_a HGNC:15698 ! UBE2Q1 +relationship: inverse_is_a HGNC:19907 ! UBE2R2 +relationship: inverse_is_a HGNC:17895 ! UBE2S +relationship: inverse_is_a HGNC:12494 ! UBE2V1 +relationship: inverse_is_a HGNC:12495 ! UBE2V2 +relationship: inverse_is_a HGNC:25616 ! UBE2W + +[Term] +id: FPLX:000490 +name: Ubiquitin +synonym: "Ub" EXACT [] +synonym: "ub" EXACT [] +synonym: "Ubiquitin" EXACT [] +synonym: "ubiquitin" EXACT [] +xref: MEDSCAN:urn:agi-complex:prophash-50bd08479c3770278693a51fe379babd +xref: MEDSCAN:urn:agi-protfc:ubiquitin +xref: NCIT:C17227 +xref: NEXTPROT-FAMILY:04276 +is_a: FPLX:000000 ! famplex + +[Term] +id: FPLX:000491 +name: UGCG +is_a: FPLX:000198 ! Glycosyltransferase +relationship: inverse_is_a HGNC:12524 ! UGCG + +[Term] +id: FPLX:000492 +name: UGT +synonym: "UGT" EXACT [] +is_a: FPLX:000198 ! Glycosyltransferase +relationship: inverse_is_a HGNC:12529 ! UGT1A +relationship: inverse_is_a HGNC:12530 ! UGT1A1 +relationship: inverse_is_a HGNC:12534 ! UGT1A2P +relationship: inverse_is_a HGNC:12535 ! UGT1A3 +relationship: inverse_is_a HGNC:12536 ! UGT1A4 +relationship: inverse_is_a HGNC:12537 ! UGT1A5 +relationship: inverse_is_a HGNC:12538 ! UGT1A6 +relationship: inverse_is_a HGNC:12539 ! UGT1A7 +relationship: inverse_is_a HGNC:12540 ! UGT1A8 +relationship: inverse_is_a HGNC:12541 ! UGT1A9 +relationship: inverse_is_a HGNC:12531 ! UGT1A10 +relationship: inverse_is_a HGNC:12532 ! UGT1A11P +relationship: inverse_is_a HGNC:12533 ! UGT1A12P +relationship: inverse_is_a HGNC:32191 ! UGT1A13P +relationship: inverse_is_a HGNC:12542 ! UGT2A1 +relationship: inverse_is_a HGNC:28183 ! UGT2A2 +relationship: inverse_is_a HGNC:28528 ! UGT2A3 +relationship: inverse_is_a HGNC:12553 ! UGT2B4 +relationship: inverse_is_a HGNC:12554 ! UGT2B7 +relationship: inverse_is_a HGNC:12544 ! UGT2B10 +relationship: inverse_is_a HGNC:12545 ! UGT2B11 +relationship: inverse_is_a HGNC:12546 ! UGT2B15 +relationship: inverse_is_a HGNC:12547 ! UGT2B17 +relationship: inverse_is_a HGNC:12548 ! UGT2B24P +relationship: inverse_is_a HGNC:12549 ! UGT2B25P +relationship: inverse_is_a HGNC:12550 ! UGT2B26P +relationship: inverse_is_a HGNC:12551 ! UGT2B27P +relationship: inverse_is_a HGNC:13479 ! UGT2B28 +relationship: inverse_is_a HGNC:12552 ! UGT2B29P +relationship: inverse_is_a HGNC:26625 ! UGT3A1 +relationship: inverse_is_a HGNC:27266 ! UGT3A2 +relationship: inverse_is_a HGNC:12555 ! UGT8 + +[Term] +id: FPLX:000493 +name: UGGT +is_a: FPLX:000198 ! Glycosyltransferase +relationship: inverse_is_a HGNC:15663 ! UGGT1 +relationship: inverse_is_a HGNC:15664 ! UGGT2 + +[Term] +id: FPLX:000494 +name: VAV +synonym: "VAV family" EXACT [] +synonym: "Vav" EXACT [] +xref: BEL:"VAV Family" +xref: MEDSCAN:urn:agi-aopfc:0000504 +xref: RE:R-HSA-2029115 +xref: RE:R-HSA-430172 +xref: RE:R-HSA-434632 +xref: RE:R-HSA-442272 +xref: RE:R-HSA-442295 +xref: RE:R-HSA-5218789 +xref: RE:R-HSA-5340329 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:12657 ! VAV1 +relationship: inverse_is_a HGNC:12658 ! VAV2 +relationship: inverse_is_a HGNC:12659 ! VAV3 + +[Term] +id: FPLX:000495 +name: VEGF +synonym: "vascular endothelial growth factor" EXACT [] +synonym: "VEGF" EXACT [] +xref: BEL:"VEGF Family" +xref: NCIT:C129646 +xref: RE:R-HSA-195361 +xref: RE:R-HSA-195376 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:12680 ! VEGFA +relationship: inverse_is_a HGNC:12681 ! VEGFB +relationship: inverse_is_a HGNC:12682 ! VEGFC +relationship: inverse_is_a HGNC:3708 ! VEGFD +relationship: inverse_is_a HGNC:8893 ! PGF + +[Term] +id: FPLX:000496 +name: VEGFR +synonym: "VEGF receptor" EXACT [] +synonym: "VEGF receptors" EXACT [] +synonym: "VEGFR ligand" EXACT [] +synonym: "VEGFR" EXACT [] +synonym: "VEGFRs" EXACT [] +xref: BEL:"VEGFR Family" +xref: GO:0005172 +xref: NCIT:C17293 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:3763 ! FLT1 +relationship: inverse_is_a HGNC:3767 ! FLT4 +relationship: inverse_is_a HGNC:6307 ! KDR + +[Term] +id: FPLX:000497 +name: Wnt +synonym: "WNT" EXACT [] +synonym: "Wnt" EXACT [] +xref: BEL:"WNT Family" +xref: IP:IPR005817 +xref: IP:IPR018161 +xref: MEDSCAN:urn:agi-aopfc:0000426 +xref: NEXTPROT-FAMILY:04686 +xref: XFAM:PF00110 +xref: RE:R-HSA-3238268 +xref: RE:R-HSA-3238374 +xref: RE:R-HSA-3247790 +xref: RE:R-HSA-3247824 +xref: RE:R-HSA-3247835 +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:12774 ! WNT1 +relationship: inverse_is_a HGNC:12780 ! WNT2 +relationship: inverse_is_a HGNC:12781 ! WNT2B +relationship: inverse_is_a HGNC:12782 ! WNT3 +relationship: inverse_is_a HGNC:15983 ! WNT3A +relationship: inverse_is_a HGNC:12783 ! WNT4 +relationship: inverse_is_a HGNC:12784 ! WNT5A +relationship: inverse_is_a HGNC:16265 ! WNT5B +relationship: inverse_is_a HGNC:12785 ! WNT6 +relationship: inverse_is_a HGNC:12786 ! WNT7A +relationship: inverse_is_a HGNC:12787 ! WNT7B +relationship: inverse_is_a HGNC:12788 ! WNT8A +relationship: inverse_is_a HGNC:12789 ! WNT8B +relationship: inverse_is_a HGNC:12778 ! WNT9A +relationship: inverse_is_a HGNC:12779 ! WNT9B +relationship: inverse_is_a HGNC:13829 ! WNT10A +relationship: inverse_is_a HGNC:12775 ! WNT10B +relationship: inverse_is_a HGNC:12776 ! WNT11 +relationship: inverse_is_a HGNC:16267 ! WNT16 + +[Term] +id: FPLX:000498 +name: YBX +synonym: "Y box binding protein" EXACT [] +synonym: "Y-box-binding protein" EXACT [] +synonym: "YBX protein family" EXACT [] +is_a: FPLX:000000 ! famplex +relationship: inverse_is_a HGNC:8014 ! YBX1 +relationship: inverse_is_a HGNC:17948 ! YBX2 +relationship: inverse_is_a HGNC:2428 ! YBX3 + +[Term] +id: FPLX:000499 +name: ETC-complex-I-core +xref: HGNC_GROUP:1149 +relationship: part_of FPLX:000501 ! ETC_complex_I +relationship: has_part HGNC:7455 ! MT-ND1 +relationship: has_part HGNC:7456 ! MT-ND2 +relationship: has_part HGNC:7458 ! MT-ND3 +relationship: has_part HGNC:7459 ! MT-ND4 +relationship: has_part HGNC:7460 ! MT-ND4L +relationship: has_part HGNC:7461 ! MT-ND5 +relationship: has_part HGNC:7462 ! MT-ND6 +relationship: has_part HGNC:7707 ! NDUFS1 +relationship: has_part HGNC:7708 ! NDUFS2 +relationship: has_part HGNC:7710 ! NDUFS3 +relationship: has_part HGNC:7714 ! NDUFS7 +relationship: has_part HGNC:7715 ! NDUFS8 +relationship: has_part HGNC:7716 ! NDUFV1 +relationship: has_part HGNC:7717 ! NDUFV2 + +[Term] +id: FPLX:000500 +name: ETC-complex-I-supernumerary +xref: HGNC_GROUP:1150 +relationship: part_of FPLX:000501 ! ETC_complex_I +relationship: has_part HGNC:7694 ! NDUFAB1 +relationship: has_part HGNC:7683 ! NDUFA1 +relationship: has_part HGNC:7685 ! NDUFA2 +relationship: has_part HGNC:7686 ! NDUFA3 +relationship: has_part HGNC:7688 ! NDUFA5 +relationship: has_part HGNC:7690 ! NDUFA6 +relationship: has_part HGNC:7691 ! NDUFA7 +relationship: has_part HGNC:7692 ! NDUFA8 +relationship: has_part HGNC:7693 ! NDUFA9 +relationship: has_part HGNC:7684 ! NDUFA10 +relationship: has_part HGNC:20371 ! NDUFA11 +relationship: has_part HGNC:23987 ! NDUFA12 +relationship: has_part HGNC:17194 ! NDUFA13 +relationship: has_part HGNC:7695 ! NDUFB1 +relationship: has_part HGNC:7697 ! NDUFB2 +relationship: has_part HGNC:7698 ! NDUFB3 +relationship: has_part HGNC:7699 ! NDUFB4 +relationship: has_part HGNC:7700 ! NDUFB5 +relationship: has_part HGNC:7701 ! NDUFB6 +relationship: has_part HGNC:7702 ! NDUFB7 +relationship: has_part HGNC:7703 ! NDUFB8 +relationship: has_part HGNC:7704 ! NDUFB9 +relationship: has_part HGNC:7696 ! NDUFB10 +relationship: has_part HGNC:20372 ! NDUFB11 +relationship: has_part HGNC:7705 ! NDUFC1 +relationship: has_part HGNC:7706 ! NDUFC2 +relationship: has_part HGNC:7711 ! NDUFS4 +relationship: has_part HGNC:7712 ! NDUFS5 +relationship: has_part HGNC:7713 ! NDUFS6 +relationship: has_part HGNC:7719 ! NDUFV3 + +[Term] +id: FPLX:000501 +name: ETC-complex-I +xref: COMPLEXPORTAL:CPX-577 +xref: ECCODE:1.6.5.3 +xref: GO:0005747 +xref: HGNC_GROUP:640 +xref: MESH:D042967 +xref: NCIT:C118184 +is_a: FPLX:000000 ! famplex +relationship: has_part FPLX:000499 ! ETC_complex_I_core +relationship: has_part FPLX:000500 ! ETC_complex_I_supernumerary + +[Term] +id: FPLX:000502 +name: ETC-complex-II +synonym: "complex II" EXACT [] +synonym: "succinate dehydrogenase (ubiquinone)" EXACT [] +synonym: "succinate dehydrogenase" EXACT [] +xref: BEL:"Respiratory Chain Complex II" +xref: COMPLEXPORTAL:CPX-561 +xref: ECCODE:1.3.5.1 +xref: GO:0005749 +xref: HGNC_GROUP:641 +xref: MESH:D042963 +xref: NCIT:C112049 +xref: RE:R-HSA-165631 +xref: RE:R-HSA-70990 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:10680 ! SDHA +relationship: has_part HGNC:10681 ! SDHB +relationship: has_part HGNC:10682 ! SDHC +relationship: has_part HGNC:10683 ! SDHD + +[Term] +id: FPLX:000503 +name: ETC-complex-III +synonym: "complex III" EXACT [] +synonym: "cytochrome bc1 complex" EXACT [] +xref: BEL:"Respiratory Chain Complex III" +xref: COMPLEXPORTAL:CPX-560 +xref: ECCODE:1.10.2.2 +xref: GO:0005750 +xref: GO:0045275 +xref: HGNC_GROUP:642 +xref: MESH:D014450 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:2579 ! CYC1 +relationship: has_part HGNC:7427 ! MT-CYB +relationship: has_part HGNC:12582 ! UQCRB +relationship: has_part HGNC:12585 ! UQCRC1 +relationship: has_part HGNC:12586 ! UQCRC2 +relationship: has_part HGNC:12587 ! UQCRFS1 +relationship: has_part HGNC:12590 ! UQCRH +relationship: has_part HGNC:29594 ! UQCRQ +relationship: has_part HGNC:30863 ! UQCR10 +relationship: has_part HGNC:30862 ! UQCR11 + +[Term] +id: FPLX:000504 +name: ETC-complex-IV +xref: ECCODE:1.9.3.1 +xref: GO:0005751 +xref: HGNC_GROUP:643 +xref: MESH:D003576 +xref: NCIT:C26034 +is_a: FPLX:000000 ! famplex +relationship: has_part HGNC:2265 ! COX4I1 +relationship: has_part HGNC:16232 ! COX4I2 +relationship: has_part HGNC:2267 ! COX5A +relationship: has_part HGNC:2269 ! COX5B +relationship: has_part HGNC:2277 ! COX6A1 +relationship: has_part HGNC:2279 ! COX6A2 +relationship: has_part HGNC:2280 ! COX6B1 +relationship: has_part HGNC:24380 ! COX6B2 +relationship: has_part HGNC:2285 ! COX6C +relationship: has_part HGNC:2287 ! COX7A1 +relationship: has_part HGNC:2288 ! COX7A2 +relationship: has_part HGNC:2291 ! COX7B +relationship: has_part HGNC:24381 ! COX7B2 +relationship: has_part HGNC:2292 ! COX7C +relationship: has_part HGNC:2294 ! COX8A +relationship: has_part HGNC:24382 ! COX8C +relationship: has_part HGNC:7419 ! MT-CO1 +relationship: has_part HGNC:7421 ! MT-CO2 +relationship: has_part HGNC:7422 ! MT-CO3 + +[Term] +id: FPLX:000505 +name: ETC-complex-V +xref: ECCODE:3.6.3.14 +xref: GO:0005753 +xref: HGNC_GROUP:644 +xref: MESH:D025261 +is_a: FPLX:000000 ! famplex + diff --git a/famplex/resources/grounding_map.csv b/famplex/resources/grounding_map.csv new file mode 100644 index 000000000..e52c1bcb9 --- /dev/null +++ b/famplex/resources/grounding_map.csv @@ -0,0 +1,2834 @@ +"AMPK (alpha 1, beta 1, gamma 1)",FPLX,000032,AMPK_A1B1G1 +"AMPK (alpha 1, beta 1, gamma 2)",FPLX,000033,AMPK_A1B1G2 +"AMPK (alpha 1, beta 1, gamma 3)",FPLX,000034,AMPK_A1B1G3 +"AMPK (alpha 1, beta 2, gamma 1)",FPLX,000035,AMPK_A1B2G1 +"AMPK (alpha 1, beta 2, gamma 2)",FPLX,000036,AMPK_A1B2G2 +"AMPK (alpha 1, beta 2, gamma 3)",FPLX,000037,AMPK_A1B2G3 +"AMPK (alpha 2, beta 1, gamma 1)",FPLX,000038,AMPK_A2B1G1 +"AMPK (alpha 2, beta 1, gamma 2)",FPLX,000039,AMPK_A2B1G2 +"AMPK (alpha 2, beta 1, gamma 3)",FPLX,000040,AMPK_A2B1G3 +"AMPK (alpha 2, beta 2, gamma 1)",FPLX,000041,AMPK_A2B2G1 +"AMPK (alpha 2, beta 2, gamma 2)",FPLX,000042,AMPK_A2B2G2 +"AMPK (alpha 2, beta 2, gamma 3)",FPLX,000043,AMPK_A2B2G3 +"AMPK (α 1, β 1, γ 1)",FPLX,000032,AMPK_A1B1G1 +"AMPK (α 1, β 1, γ 2)",FPLX,000033,AMPK_A1B1G2 +"AMPK (α 1, β 1, γ 3)",FPLX,000034,AMPK_A1B1G3 +"AMPK (α 1, β 2, γ 1)",FPLX,000035,AMPK_A1B2G1 +"AMPK (α 1, β 2, γ 2)",FPLX,000036,AMPK_A1B2G2 +"AMPK (α 1, β 2, γ 3)",FPLX,000037,AMPK_A1B2G3 +"AMPK (α 2, β 1, γ 1)",FPLX,000038,AMPK_A2B1G1 +"AMPK (α 2, β 1, γ 2)",FPLX,000039,AMPK_A2B1G2 +"AMPK (α 2, β 1, γ 3)",FPLX,000040,AMPK_A2B1G3 +"AMPK (α 2, β 2, γ 1)",FPLX,000041,AMPK_A2B2G1 +"AMPK (α 2, β 2, γ 2)",FPLX,000042,AMPK_A2B2G2 +"AMPK (α 2, β 2, γ 3)",FPLX,000043,AMPK_A2B2G3 +"Glutamate receptors, ionotropic, kainate",FPLX,000269,Kainate_family +"Na(+),K(+)-ATPase",FPLX,000303,Na_K_ATPase +"Na,K-ATPase beta subunit",FPLX,000058,ATP1B +"Na,K-ATPase β subunit",FPLX,000058,ATP1B +"Na,K-ATPase",FPLX,000303,Na_K_ATPase +(9-1-1) complex,FPLX,000001,9_1_1 +14-3-3 proteins,FPLX,000323,p14_3_3 +14-3-3,FPLX,000323,p14_3_3 +14-3-3zeta,UP,P63104,1433Z_HUMAN +4E-BP1,UP,Q13541,4EBP1_HUMAN +4EBP,FPLX,000154,EIF4EBP +4EBP1,UP,Q13541,4EBP1_HUMAN +53BP1,UP,Q12888,TP53B_HUMAN +9-1-1 complex,FPLX,000001,9_1_1 +9-1-1,FPLX,000001,9_1_1 +a-adrenoreceptor,FPLX,000019,ADRA +a-cathenin,FPLX,000126,CTNNA +A2t,FPLX,000047,Annexin_II_heterotetramer +ABA,PUBCHEM,5280896, +ABA,CHEBI,CHEBI:2365,(+)-abscisic acid +Abeta,UP,P05067,A4_HUMAN +Abeta,CHEBI,CHEBI:64645,amyloid-beta +Abi1,UP,Q8IZP0,ABI1_HUMAN +ABL family,FPLX,000003,ABL_family +ABL,FPLX,000003,ABL_family +Abl,UP,P00519,ABL1_HUMAN +AC,MESH,D000230,Adenocarcinoma +AC,UP,Q08828,ADCY1_HUMAN +ACAD,FPLX,000004,ACAD +ACC,FPLX,000005,ACC +ACCs,FPLX,000005,ACC +Acetate-CoA ligase,FPLX,000006,Acetyl_CoA_synthetase +acetyl CoA ligase,FPLX,000006,Acetyl_CoA_synthetase +acetyl CoA synthase,FPLX,000006,Acetyl_CoA_synthetase +Acetyl Coenzyme A Carboxylase,FPLX,000005,ACC +Acetyl-CoA carboxylase,FPLX,000005,ACC +acetyl-CoA carboxylase,FPLX,000005,ACC +Acetyl-CoA synthetase,FPLX,000006,Acetyl_CoA_synthetase +acetyl-CoA synthetase,FPLX,000006,Acetyl_CoA_synthetase +acetyl-coenzyme A synthase,FPLX,000006,Acetyl_CoA_synthetase +acetylcholine receptor,FPLX,000102,CHRM +Ack1,UP,Q07912,ACK1_HUMAN +ACS,FPLX,000006,Acetyl_CoA_synthetase +Acsl,FPLX,000008,ACSL +actin filament,FPLX,000009,Actin +actin,FPLX,000009,Actin +actinin,FPLX,000014,ACTN +actins,FPLX,000009,Actin +Activin A protein,FPLX,000011,Activin_A +Activin A,FPLX,000011,Activin_A +activin A,FPLX,000011,Activin_A +activin AB,FPLX,000012,Activin_AB +activin protein,FPLX,000010,Activin +Activin,FPLX,000010,Activin +activin,FPLX,000010,Activin +activin-A,FPLX,000011,Activin_A +activin-B,FPLX,000013,Activin_B +activinA,FPLX,000011,Activin_A +activins,FPLX,000010,Activin +acyl CoA dehydrogenase,FPLX,000004,ACAD +acyl-CoA dehydrogenase,FPLX,000004,ACAD +Acyl-CoA Oxidase,FPLX,000007,ACOX +acyl-CoA oxidases,FPLX,000007,ACOX +Adaptor Protein 2 complex,FPLX,000015,Adaptor_protein_II +adaptor protein complex 2,FPLX,000015,Adaptor_protein_II +adaptor protein complex 3,FPLX,000016,Adaptor_protein_III +adenylate cyclase,FPLX,000017,ADCY +adenylyl cyclase,FPLX,000017,ADCY +adhesion,GO,GO:0007155,cell adhesion +adhesion,MESH,D002448,Cell Adhesion +adiponectin,UP,Q15848,ADIPO_HUMAN +ADP,CHEBI,CHEBI:16761,ADP +ADP,PUBCHEM,6022, +ADP ribosylation factor,FPLX,000053,ARF_GTPase_family +afatinib,PUBCHEM,10184653, +afatinib,LINCS,10133-101, +afatinib,CHEBI,CHEBI:61390,afatinib +AHR,UP,P35869,AHR_HUMAN +AICAR,PUBCHEM,65110, +AICAR,CHEBI,CHEBI:18406,AICA ribonucleotide +AKT family,FPLX,000023,AKT +AKT,FPLX,000023,AKT +Akt,FPLX,000023,AKT +AKT1,UP,P31749,AKT1_HUMAN +Akt1,UP,P31749,AKT1_HUMAN +AKT2,UP,P31751,AKT2_HUMAN +Akt2,UP,P31751,AKT2_HUMAN +alcohol dehydrogenase,FPLX,000018,ADH +alcohol,PUBCHEM,702, +alcohol,CHEBI,CHEBI:16236,ethanol +alcohol,HMDB,HMDB00108, +aldehyde dehydrogenase (NAD+),FPLX,000024,ALDH +Aldehyde dehydrogenase,FPLX,000024,ALDH +aldehyde dehydrogenase,FPLX,000024,ALDH +ALDH,FPLX,000024,ALDH +ALDO,FPLX,000025,ALDO +aldosterone,CHEBI,CHEBI:27584,aldosterone +aldosterone,PUBCHEM,5839, +ALG10,FPLX,000026,ALG10 +ALIX,HGNC,8766,PDCD6IP +ALIX,UP,Q8WUM4,PDC6I_HUMAN +ALK,UP,Q9UM73,ALK_HUMAN +alkali myosin light chains,FPLX,000297,MYL_alkali +alpha adrenoceptor,FPLX,000019,ADRA +alpha catenin,FPLX,000126,CTNNA +alpha tubulin,FPLX,000483,TUBA +alpha(2)-adrenoceptors,FPLX,000020,ADRA2 +alpha(2)-ARs,FPLX,000020,ADRA2 +alpha-adrenergic receptor,FPLX,000019,ADRA +alpha-adrenoreceptor,FPLX,000019,ADRA +alpha-adrenoreceptors,FPLX,000019,ADRA +alpha-catenin,FPLX,000126,CTNNA +alpha1 adrenoceptor,FPLX,000019,ADRA +"Alpha-1,2-glucosyltransferase",FPLX,000026,ALG10 +"Alpha-1,2-glucosyltransferases",FPLX,000026,ALG10 +"alpha-1,2-glucosyltransferase",FPLX,000026,ALG10 +"alpha-1,2-glucosyltransferases",FPLX,000026,ALG10 +"Alpha-1,3-glucosyltransferase",FPLX,000029,ALG6_family +"Alpha-1,3-glucosyltransferases",FPLX,000029,ALG6_family +"alpha-1,3-glucosyltransferase",FPLX,000029,ALG6_family +"alpha-1,3-glucosyltransferases",FPLX,000029,ALG6_family +"Alpha-1,4-glucosyltransferase",FPLX,000029,ALG6_family +"Alpha-1,4-glucosyltransferases",FPLX,000029,ALG6_family +"alpha-1,4-glucosyltransferase",FPLX,000029,ALG6_family +"alpha-1,4-glucosyltransferases",FPLX,000029,ALG6_family +alpha1beta1gamma1,FPLX,000032,AMPK_A1B1G1 +alpha1beta1gamma2,FPLX,000033,AMPK_A1B1G2 +alpha1beta1gamma3,FPLX,000034,AMPK_A1B1G3 +alpha1beta2gamma1,FPLX,000035,AMPK_A1B2G1 +alpha1beta2gamma2,FPLX,000036,AMPK_A1B2G2 +alpha2 adrenoceptor,FPLX,000020,ADRA2 +alpha2-AR,FPLX,000020,ADRA2 +alpha2beta1 integrin,FPLX,000261,Integrins +alpha2beta1gamma1,FPLX,000038,AMPK_A2B1G1 +alpha2beta2gamma1,FPLX,000041,AMPK_A2B2G1 +alpha2beta2gamma2,FPLX,000042,AMPK_A2B2G2 +alpha2beta2gamma3,FPLX,000043,AMPK_A2B2G3 +ALS,UP,P35858,ALS_HUMAN +AM,HGNC,259,ADM +AM,UP,P35318,ADML_HUMAN +AM,MESH,D000650,Amnion +AMG655,MESH,C554537,conatumumab +AMLC,FPLX,000297,MYL_alkali +AMP,HMDB,HMDB00045, +AMP,CHEBI,CHEBI:16027,adenosine 5'-monophosphate +AMP,PUBCHEM,6083, +AMPA glutamate receptor,FPLX,000191,GRIA +AMPA receptor,FPLX,000191,GRIA +AMPA-R,FPLX,000191,GRIA +AMPA-subtype ionotropic glutamate receptors,FPLX,000191,GRIA +AMPAR,FPLX,000191,GRIA +AMPARs,FPLX,000191,GRIA +AMPK (A1/B1/G1),FPLX,000032,AMPK_A1B1G1 +AMPK (A1/B1/G2),FPLX,000033,AMPK_A1B1G2 +AMPK (A1/B1/G3),FPLX,000034,AMPK_A1B1G3 +AMPK (A1/B2/G1),FPLX,000035,AMPK_A1B2G1 +AMPK (A1/B2/G2),FPLX,000036,AMPK_A1B2G2 +AMPK (A1/B2/G3),FPLX,000037,AMPK_A1B2G3 +AMPK (A2/B1/G1),FPLX,000038,AMPK_A2B1G1 +AMPK (A2/B1/G2),FPLX,000039,AMPK_A2B1G2 +AMPK (A2/B1/G3),FPLX,000040,AMPK_A2B1G3 +AMPK (A2/B2/G1),FPLX,000041,AMPK_A2B2G1 +AMPK (A2/B2/G2),FPLX,000042,AMPK_A2B2G2 +AMPK (A2/B2/G3),FPLX,000043,AMPK_A2B2G3 +AMPK a1b1g1,FPLX,000032,AMPK_A1B1G1 +AMPK a1b1g2,FPLX,000033,AMPK_A1B1G2 +AMPK a1b1g3,FPLX,000034,AMPK_A1B1G3 +AMPK a1b2g1,FPLX,000035,AMPK_A1B2G1 +AMPK a1b2g2,FPLX,000036,AMPK_A1B2G2 +AMPK a2b1g1,FPLX,000038,AMPK_A2B1G1 +AMPK a2b2g1,FPLX,000041,AMPK_A2B2G1 +AMPK a2b2g2,FPLX,000042,AMPK_A2B2G2 +AMPK a2b2g3,FPLX,000043,AMPK_A2B2G3 +AMPK alpha1beta1gamma1,FPLX,000032,AMPK_A1B1G1 +AMPK alpha1beta1gamma2,FPLX,000033,AMPK_A1B1G2 +AMPK alpha1beta1gamma3,FPLX,000034,AMPK_A1B1G3 +AMPK alpha1beta2gamma1,FPLX,000035,AMPK_A1B2G1 +AMPK alpha1beta2gamma2,FPLX,000036,AMPK_A1B2G2 +AMPK alpha1beta2gamma3,FPLX,000037,AMPK_A1B2G3 +AMPK alpha2beta1gamma1,FPLX,000038,AMPK_A2B1G1 +AMPK alpha2beta1gamma2,FPLX,000039,AMPK_A2B1G2 +AMPK alpha2beta1gamma3,FPLX,000040,AMPK_A2B1G3 +AMPK alpha2beta2gamma1,FPLX,000041,AMPK_A2B2G1 +AMPK alpha2beta2gamma2,FPLX,000042,AMPK_A2B2G2 +AMPK alpha2beta2gamma3,FPLX,000043,AMPK_A2B2G3 +AMPK α1β1γ1,FPLX,000032,AMPK_A1B1G1 +AMPK α1β1γ2,FPLX,000033,AMPK_A1B1G2 +AMPK α1β1γ3,FPLX,000034,AMPK_A1B1G3 +AMPK α1β2γ1,FPLX,000035,AMPK_A1B2G1 +AMPK α1β2γ2,FPLX,000036,AMPK_A1B2G2 +AMPK α1β2γ3,FPLX,000037,AMPK_A1B2G3 +AMPK α2β1γ1,FPLX,000038,AMPK_A2B1G1 +AMPK α2β1γ2,FPLX,000039,AMPK_A2B1G2 +AMPK α2β1γ3,FPLX,000040,AMPK_A2B1G3 +AMPK α2β2γ1,FPLX,000041,AMPK_A2B2G1 +AMPK α2β2γ2,FPLX,000042,AMPK_A2B2G2 +AMPK α2β2γ3,FPLX,000043,AMPK_A2B2G3 +AMPK,FPLX,000031,AMPK +AMPK-alpha1,UP,Q13131,AAPK1_HUMAN +AMPK-alpha2,UP,P54646,AAPK2_HUMAN +AMPK-α1,UP,Q13131,AAPK1_HUMAN +AMPK-α2,UP,P54646,AAPK2_HUMAN +AMPKalpha,FPLX,000044,AMPK_alpha +AMPKalpha1 catalytic domain,UP,Q13131,AAPK1_HUMAN +AMPKalpha1,UP,Q13131,AAPK1_HUMAN +AMPKα,FPLX,000044,AMPK_alpha +AMPKα1 catalytic domain,UP,Q13131,AAPK1_HUMAN +AMPKα1,UP,Q13131,AAPK1_HUMAN +amyloid beta,UP,P05067,A4_HUMAN +amyloid beta,CHEBI,CHEBI:64645,amyloid-beta +amyloid β,UP,P05067,A4_HUMAN +amyloid β,CHEBI,CHEBI:64645,amyloid-beta +Ang II,UP,P01019,ANGT_HUMAN +AngII,UP,P01019,ANGT_HUMAN +angiogenesis,GO,GO:0001525,angiogenesis +angiogenesis,MESH,D018919,"Neovascularization, Physiologic" +annexin A2 heterotetramer,FPLX,000047,Annexin_II_heterotetramer +annexin II heterotetramer,FPLX,000047,Annexin_II_heterotetramer +ANXA2 heterotetramer,FPLX,000047,Annexin_II_heterotetramer +AP-1,FPLX,000048,AP1 +AP-2 adaptor complex,FPLX,000015,Adaptor_protein_II +AP-2 complex,FPLX,000015,Adaptor_protein_II +AP-2 transcription factor,FPLX,000463,TFAP2 +AP-2,FPLX,000015,Adaptor_protein_II +AP-3,FPLX,000016,Adaptor_protein_III +AP1,FPLX,000048,AP1 +AP2 adaptor complex,FPLX,000015,Adaptor_protein_II +AP2 clathrin adaptor complex,FPLX,000015,Adaptor_protein_II +AP2 complex,FPLX,000015,Adaptor_protein_II +AP2,FPLX,000015,Adaptor_protein_II +AP3,FPLX,000016,Adaptor_protein_III +Apaf-1,UP,O14727,APAF_HUMAN +APC,UP,P25054,APC_HUMAN +APC/C,FPLX,000050,APC_C +apigenin,CHEBI,CHEBI:18388,apigenin +apigenin,PUBCHEM,5280443, +ApoA,FPLX,000051,APOA +apoA,FPLX,000051,APOA +apocynin,CHEBI,CHEBI:2781,apocynin +apocynin,PUBCHEM,2214, +apolipoprotein (a),FPLX,000051,APOA +apolipoprotein A,FPLX,000051,APOA +apolipoprotein(A),FPLX,000051,APOA +apolipoprotein(a),FPLX,000051,APOA +Apolipoprotein,FPLX,000052,Apolipoprotein +apolipoprotein,FPLX,000052,Apolipoprotein +apolipoproteins,FPLX,000052,Apolipoprotein +Apoptosis,GO,GO:0006915,apoptotic process +Apoptosis,MESH,D017209,Apoptosis +apoptosis,GO,GO:0006915,apoptotic process +apoptosis,MESH,D017209,Apoptosis +AR,UP,P10275,ANDR_HUMAN +ARF,FPLX,000053,ARF_GTPase_family +ARF,UP,Q8N726,ARF_HUMAN +Arf,UP,Q8N726,ARF_HUMAN +Arp2/3,FPLX,000054,Arp2_3_protein +Arsenic trioxide,CHEBI,CHEBI:30621,diarsenic trioxide +Arsenic trioxide,PUBCHEM,518605, +arsenic,PUBCHEM,5359596, +arsenic,CHEBI,CHEBI:27563,arsenic atom +arsenite,CHEBI,CHEBI:29866,arsenite(3-) +arsenite,PUBCHEM,544, +artemisinin,CHEBI,CHEBI:223316,(+)-artemisinin +artemisinin,PUBCHEM,68827, +ASK1,UP,Q99683,M3K5_HUMAN +aspirin,PUBCHEM,2244, +aspirin,CHEBI,CHEBI:15365,acetylsalicylic acid +ASPP1,UP,Q96KQ4,ASPP1_HUMAN +ASPP2,UP,Q13625,ASPP2_HUMAN +ATF2,UP,P15336,ATF2_HUMAN +ATG4,FPLX,000056,ATG4 +Atg4,FPLX,000056,ATG4 +ATM,UP,Q13315,ATM_HUMAN +ATP synthase H + transporting mitochondrial F0 complex subunit G,FPLX,000059,ATP5G +ATP synthase,FPLX,000060,ATP_synthase +ATP,HMDB,HMDB00538, +ATP,PUBCHEM,5957, +ATP,CHEBI,CHEBI:15422,ATP +ATP1A,FPLX,000057,ATP1A +ATP1B,FPLX,000058,ATP1B +ATPase Na+/K+ transporting subunit alpha,FPLX,000057,ATP1A +ATPase Na+/K+ transporting subunit beta,FPLX,000057,ATP1A +ATPase Na+/K+ transporting subunit α,FPLX,000057,ATP1A +ATPase Na+/K+ transporting subunit β,FPLX,000057,ATP1A +ATR,UP,Q13535,ATR_HUMAN +ATRA,CHEBI,CHEBI:15367,all-trans-retinoic acid +ATRA,PUBCHEM,444795, +autophagic cell death,GO,GO:0048102,autophagic cell death +Autophagy,GO,GO:0006914,autophagy +Autophagy,MESH,D001343,Autophagy +autophagy,GO,GO:0006914,autophagy +autophagy,MESH,D001343,Autophagy +Axin,FPLX,000062,AXIN +AZD6244,CHEBI,CHEBI:90227,selumetinib +AZD6244,PUBCHEM,10127622, +Aβ,UP,P05067,A4_HUMAN +Aβ,CHEBI,CHEBI:64645,amyloid-beta +B3GAT,FPLX,000063,B3GAT +b-adrenergic receptor,FPLX,000021,ADRB +b-arrestin,FPLX,000055,ARRB +B-Raf,UP,P15056,BRAF_HUMAN +b-receptors,FPLX,000021,ADRB +B1,UP,O43157,PLXB1_HUMAN +B1,UP,P14635,CCNB1_HUMAN +BAD,UP,Q92934,BAD_HUMAN +Bad,UP,Q92934,BAD_HUMAN +Bak,UP,Q16611,BAK_HUMAN +Bam32,UP,Q9UN19,DAPP1_HUMAN +BARK,FPLX,000022,ADRBK +barrestins,FPLX,000055,ARRB +BAX,UP,Q07812,BAX_HUMAN +Bax,UP,Q07812,BAX_HUMAN +BCKDC,FPLX,000064,BCKDC +BCKDH,FPLX,000064,BCKDC +BCL-2,UP,P10415,BCL2_HUMAN +Bcl-2,UP,P10415,BCL2_HUMAN +bcl-2,UP,P10415,BCL2_HUMAN +Bcl-3,HGNC,998,BCL3 +Bcl-xL,UP,Q07817,B2CL1_HUMAN +BCL2,UP,P10415,BCL2_HUMAN +Bcl2,UP,P10415,BCL2_HUMAN +BCR,UP,P11274,BCR_HUMAN +Beclin-1,UP,Q14457,BECN1_HUMAN +berberine,CHEBI,CHEBI:16118,berberine +berberine,PUBCHEM,2353, +"Beta-1,3-glucuronyltransferase",FPLX,000063,B3GAT +"Beta-1,3-glucuronyltransferases",FPLX,000063,B3GAT +"beta-1,3-glucuronyltransferase",FPLX,000063,B3GAT +"beta-1,3-glucuronyltransferases",FPLX,000063,B3GAT +Beta 3-glycosyltransferase,FPLX,000065,Beta_3_4_GTF +Beta 3-glycosyltransferases,FPLX,000065,Beta_3_4_GTF +beta 3-glycosyltransferase,FPLX,000065,Beta_3_4_GTF +beta 3-glycosyltransferases,FPLX,000065,Beta_3_4_GTF +Beta 4-glycosyltransferase,FPLX,000065,Beta_3_4_GTF +Beta 4-glycosyltransferases,FPLX,000065,Beta_3_4_GTF +beta 4-glycosyltransferase,FPLX,000065,Beta_3_4_GTF +beta 4-glycosyltransferases,FPLX,000065,Beta_3_4_GTF +beta adrenergic receptor kinase,FPLX,000022,ADRBK +beta interferons,FPLX,000247,IFNB +Beta Tubulin,FPLX,000484,TUBB +Beta tubulin,FPLX,000484,TUBB +beta Tubulin,FPLX,000484,TUBB +beta tubulin,FPLX,000484,TUBB +beta-adrenergic receptor,FPLX,000021,ADRB +beta-adrenoreceptor,FPLX,000021,ADRB +beta-catenin,UP,P35222,CTNB1_HUMAN +beta-TrCP,UP,Q9Y297,FBW1A_HUMAN +Beta-Tubulin,FPLX,000484,TUBB +Beta-tubulin,FPLX,000484,TUBB +beta-Tubulin,FPLX,000484,TUBB +beta-tubulin,FPLX,000484,TUBB +betaAR,FPLX,000021,ADRB +betaARK,FPLX,000022,ADRBK +BEZ235,PUBCHEM,11977753, +BEZ235,CHEBI,CHEBI:71952,dactolisib +bFGF,UP,P09038,FGF2_HUMAN +Bid,UP,P55957,BID_HUMAN +BIM,UP,O43521,B2L11_HUMAN +Bim,UP,O43521,B2L11_HUMAN +biosynthesis,GO,GO:0009058,biosynthetic process +BIRs,FPLX,000066,BIRC +BITC,PUBCHEM,2346, +BITC,CHEBI,CHEBI:17484,benzyl isothiocyanate +BMF,UP,Q96LC9,BMF_HUMAN +BMI1,UP,P35226,BMI1_HUMAN +BMP Receptor Type I,FPLX,000069,BMP_receptor_type_I +BMP Receptor Type II,FPLX,000070,BMP_receptor_type_II +BMP type I receptor,FPLX,000069,BMP_receptor_type_I +BMP type II receptor,FPLX,000070,BMP_receptor_type_II +BMP,FPLX,000067,BMP +BMP9,UP,Q9UK05,GDF2_HUMAN +bone morphogenetic protein I receptor,FPLX,000069,BMP_receptor_type_I +bone morphogenetic protein receptor 1,FPLX,000069,BMP_receptor_type_I +bone morphogenetic protein receptor 2,FPLX,000070,BMP_receptor_type_II +bone morphogenetic protein receptor type I,FPLX,000069,BMP_receptor_type_I +bone morphogenetic protein receptor type II,FPLX,000070,BMP_receptor_type_II +bone morphogenetic protein type I receptors,FPLX,000069,BMP_receptor_type_I +bone morphogenetic protein type II receptors,FPLX,000070,BMP_receptor_type_II +bortezomib,CHEBI,CHEBI:52717,bortezomib +bortezomib,PUBCHEM,387447, +BPA,CHEBI,CHEBI:33216,bisphenol A +BPA,PUBCHEM,6623, +BRAF,UP,P15056,BRAF_HUMAN +branched-chain alpha-keto acid dehydrogenase complex,FPLX,000064,BCKDC +branched-chain alpha-ketoacid dehydrogenase complex,FPLX,000064,BCKDC +branched-chain α-keto acid dehydrogenase complex,FPLX,000064,BCKDC +branched-chain α-ketoacid dehydrogenase complex,FPLX,000064,BCKDC +BRCA,FPLX,000071,BRCA +BRCA1,UP,P38398,BRCA1_HUMAN +BRCA2,UP,P51587,BRCA2_HUMAN +BRI,FPLX,000069,BMP_receptor_type_I +BRII,FPLX,000070,BMP_receptor_type_II +BRSK1,UP,Q8TDC3,BRSK1_HUMAN +BRSK2,UP,Q8IWQ3,BRSK2_HUMAN +Bub1,UP,O43683,BUB1_HUMAN +BubR1,UP,O60566,BUB1B_HUMAN +butein,CHEBI,CHEBI:3237,butein +butein,PUBCHEM,5281222, +c-Abl Kinase,UP,P00519,ABL1_HUMAN +c-Abl,UP,P00519,ABL1_HUMAN +c-Cbl protein,UP,P22681,CBL_HUMAN +c-Cbl,UP,P22681,CBL_HUMAN +c-FLIP,UP,O15519,CFLAR_HUMAN +c-Fos,UP,P01100,FOS_HUMAN +c-fos,UP,P01100,FOS_HUMAN +c-JNK,FPLX,000267,JNK +c-Jun N-terminal kinase,FPLX,000267,JNK +c-Jun NH2-terminal kinase,FPLX,000267,JNK +c-Jun,UP,P05412,JUN_HUMAN +c-jun,UP,P05412,JUN_HUMAN +C-MAF,UP,O75444,MAF_HUMAN +c-MAF,UP,O75444,MAF_HUMAN +c-Maf,UP,O75444,MAF_HUMAN +c-maf,UP,O75444,MAF_HUMAN +c-MET,HGNC,7029,MET +c-met,HGNC,7029,MET +c-Met,UP,P08581,MET_HUMAN +c-Myb,UP,P10242,MYB_HUMAN +c-myc oncogene,UP,P01106,MYC_HUMAN +c-myc proteins,UP,P01106,MYC_HUMAN +c-MYC,UP,P01106,MYC_HUMAN +c-Myc,UP,P01106,MYC_HUMAN +c-myc,UP,P01106,MYC_HUMAN +C-PARP,UP,P09874,PARP1_HUMAN +c-Raf,UP,P04049,RAF1_HUMAN +c-Rel,HGNC,9954,REL +c-src,HGNC,11283,SRC +c-Src,UP,P12931,SRC_HUMAN +C/EBP,FPLX,000097,CEBP +C/EBPalpha,UP,P49715,CEBPA_HUMAN +C/EBPbeta,UP,P17676,CEBPB_HUMAN +C/EBPβ,UP,P17676,CEBPB_HUMAN +C/EBPα,UP,P49715,CEBPA_HUMAN +c1 complex,FPLX,000072,C1 +C1,FPLX,000072,C1 +C1-complex,FPLX,000072,C1 +C1q,FPLX,000073,C1q +Ca(2+)-calmodulin-dependent protein kinase II,FPLX,000077,CAMK2_complex +Ca(2+)/calmodulin-dependent kinase II,FPLX,000077,CAMK2_complex +Ca,HMDB,HMDB00464, +Ca,CHEBI,CHEBI:29108,calcium(2+) +Ca,PUBCHEM,271, +cadherin,FPLX,000074,Cadherin +caffeine,PUBCHEM,2519, +caffeine,CHEBI,CHEBI:27732,caffeine +Calcineurin catalytic subunit,FPLX,000384,PPP3C +Calcineurin regulatory subunit,FPLX,000385,PPP3R +calcineurin,FPLX,000383,PPP3 +calcium,HMDB,HMDB00464, +calcium,CHEBI,CHEBI:29108,calcium(2+) +calcium,PUBCHEM,271, +Calmodulin,FPLX,000075,CALM +calmodulin,FPLX,000075,CALM +calmodulindependent kinase II,FPLX,000078,CAMK2_family +calpain,FPLX,000079,CAPN +CaM kinase II,FPLX,000077,CAMK2_complex +CaM,FPLX,000075,CALM +CaMK family,FPLX,000076,CAMK +CaMK II,FPLX,000077,CAMK2_complex +CaMK,FPLX,000076,CAMK +CAMK2,FPLX,000078,CAMK2_family +CaMK2,FPLX,000078,CAMK2_family +CaMKII,FPLX,000077,CAMK2_complex +CAMKII,FPLX,000078,CAMK2_family +cAMP,PUBCHEM,6076, +cAMP,CHEBI,CHEBI:17489,"3',5'-cyclic AMP" +cAMP,HMDB,HMDB00058, +cAMP-dependent PK,FPLX,000363,PKA +cAMP-dependent protein kinase,FPLX,000363,PKA +CaN,FPLX,000383,PPP3 +CAP23,UP,P80723,BASP1_HUMAN +CAPE,PUBCHEM,5281787, +CAPE,CHEBI,CHEBI:8062,phenethyl caffeate +capsaicin,PUBCHEM,1548943, +capsaicin,CHEBI,CHEBI:3374,capsaicin +carboxylesterase,FPLX,000080,Carboxylesterase +carboxylesterases,FPLX,000080,Carboxylesterase +CARP-1,UP,Q8IX12,CCAR1_HUMAN +Cas,UP,P56945,BCAR1_HUMAN +Casein kinase 1,FPLX,000124,CSNK1 +casein kinase 1,FPLX,000124,CSNK1 +casein kinase 2,FPLX,000104,CK2 +casein kinase I,FPLX,000124,CSNK1 +casein kinase II complex,FPLX,000104,CK2 +casein kinase II,FPLX,000104,CK2 +caspase 3,UP,P42574,CASP3_HUMAN +caspase 8,UP,Q14790,CASP8_HUMAN +caspase,FPLX,000081,Caspase +caspase-1,UP,P29466,CASP1_HUMAN +Caspase-3,UP,P42574,CASP3_HUMAN +caspase-3,UP,P42574,CASP3_HUMAN +caspase-3/7,FPLX,000082,Caspase_3_7 +caspase-8,UP,Q14790,CASP8_HUMAN +caspase-9,UP,P55211,CASP9_HUMAN +caspases,FPLX,000081,Caspase +catalase,UP,P04040,CATA_HUMAN +catalytic subunit of calcineurin,FPLX,000384,PPP3C +catenin alpha,FPLX,000126,CTNNA +catenin α,FPLX,000126,CTNNA +Caveolin,FPLX,000083,CAV +caveolin,FPLX,000083,CAV +caveolin-1,UP,Q03135,CAV1_HUMAN +CBF3 complex,FPLX,000084,CBF3 +CBF3,FPLX,000084,CBF3 +Cbl,UP,P22681,CBL_HUMAN +Cbl-b,UP,Q13191,CBLB_HUMAN +CBP,UP,Q92793,CBP_HUMAN +Cby,UP,Q9Y3M2,CBY1_HUMAN +CCAAT/enhancer binding protein,FPLX,000097,CEBP +CCN2,UP,P29279,CTGF_HUMAN +CCND1,UP,P24385,CCND1_HUMAN +CCT complex,FPLX,000085,CCT_complex +CCT,FPLX,000085,CCT_complex +Cd,PUBCHEM,23973, +Cd,CHEBI,CHEBI:22977,cadmium atom +CD16,FPLX,000086,CD16 +CD24,UP,P25063,CD24_HUMAN +CD28,UP,P10747,CD28_HUMAN +CD3,FPLX,000087,CD3 +CD32,FPLX,000088,CD32 +CD4,UP,P01730,CD4_HUMAN +CD44,UP,P16070,CD44_HUMAN +CD64,FPLX,000089,CD64 +CD8,FPLX,000090,CD8 +CD95,UP,P25445,TNR6_HUMAN +Cdc20,UP,Q12834,CDC20_HUMAN +CDC25 family,FPLX,000091,CDC25 +Cdc25 phosphatases,FPLX,000091,CDC25 +CDC25,FPLX,000091,CDC25 +Cdc25,FPLX,000091,CDC25 +CDC42,UP,P60953,CDC42_HUMAN +Cdc42,UP,P60953,CDC42_HUMAN +Cdc6,UP,Q99741,CDC6_HUMAN +CDDP,CHEBI,CHEBI:27899,cisplatin +CDDP,PUBCHEM,441203, +CDK,FPLX,000092,CDK +Cdk,FPLX,000092,CDK +CDK1,UP,P06493,CDK1_HUMAN +Cdk1,UP,P06493,CDK1_HUMAN +CDK2,UP,P24941,CDK2_HUMAN +Cdk2,UP,P24941,CDK2_HUMAN +cdk2,UP,P24941,CDK2_HUMAN +CDK4,UP,P11802,CDK4_HUMAN +Cdk4,UP,P11802,CDK4_HUMAN +CDK6,UP,Q00534,CDK6_HUMAN +CDK8,UP,P49336,CDK8_HUMAN +CDK9,UP,P50750,CDK9_HUMAN +CDKN,FPLX,000094,CDKN +CDKN1,FPLX,000095,CDKN1 +CDKN1A,UP,P38936,CDN1A_HUMAN +CDKN2,FPLX,000096,CDKN2 +CDKs,FPLX,000092,CDK +celecoxib,PUBCHEM,2662, +celecoxib,CHEBI,CHEBI:41423,celecoxib +cell adhesion,GO,GO:0007155,cell adhesion +cell adhesion,MESH,D002448,Cell Adhesion +cell cycle,GO,GO:0007049,cell cycle +cell cycle,MESH,D002453,Cell Cycle +cell death,GO,GO:0008219,cell death +cell death,MESH,D016923,Cell Death +cell growth,GO,GO:0016049,cell growth +cell growth,MESH,D048708,Cell Growth Processes +cell migration,GO,GO:0016477,cell migration +cell migration,MESH,D002465,Cell Movement +cell migration,NCIT,C26169, +cell motility,GO,GO:0016477,cell migration +cell motility,MESH,D002465,Cell Movement +cell motility,NCIT,C16404, +cell motility,GO,GO:0048870,cell motility +cell proliferation,GO,GO:0008283,cell population proliferation +cell proliferation,MESH,D049109,Cell Proliferation +cell survival,MESH,D002470,Cell Survival +cell viability,MESH,D002470,Cell Survival +cellular senescence,GO,GO:0090398,cellular senescence +cellular senescence,MESH,D016922,Cellular Senescence +ceramide,CHEBI,CHEBI:17761,ceramide +cetuximab,CHEMBL,1201577, +CFM-4,PUBCHEM,2871439, +chaperonin containing TCP-1,FPLX,000085,CCT_complex +chaperonin,FPLX,000085,CCT_complex +chaperonin-containing t-complex polypeptide 1,FPLX,000085,CCT_complex +chaperonin-containing TCP1 complex,FPLX,000085,CCT_complex +checkpoint kinase,FPLX,000098,CHEK +chemoattractant receptor,FPLX,000100,Chemokine_receptor +chemokine,FPLX,000099,Chemokine +chemokines,FPLX,000099,Chemokine +CHIP,UP,Q9UNE7,CHIP_HUMAN +CHK1,UP,O14757,CHK1_HUMAN +Chk1,UP,O14757,CHK1_HUMAN +CHK2,UP,O96017,CHK2_HUMAN +Chk2,UP,O96017,CHK2_HUMAN +cholesterol,CHEBI,CHEBI:16113,cholesterol +cholesterol,PUBCHEM,5997, +choline esterase,FPLX,000101,Cholinesterase +cholinesterase,FPLX,000101,Cholinesterase +CHOP,UP,P35638,DDIT3_HUMAN +CIP1,UP,P38936,CDN1A_HUMAN +CIP2A,UP,Q8TCG1,CIP2A_HUMAN +Cisplatin,CHEBI,CHEBI:27899,cisplatin +Cisplatin,PUBCHEM,441203, +cisplatin,CHEBI,CHEBI:27899,cisplatin +cisplatin,PUBCHEM,441203, +CK2,FPLX,000104,CK2 +CKI,FPLX,000094,CDKN +Clade B serpin,FPLX,000431,SERPINB +clade B serpins,FPLX,000431,SERPINB +Class 1 NF-kappaBs,FPLX,000312,NFkappaB_1 +class 1 NF-kappaBs,FPLX,000312,NFkappaB_1 +Class 1 NF-κBs,FPLX,000312,NFkappaB_1 +class 1 NF-κBs,FPLX,000312,NFkappaB_1 +Class 2 NF-kappaBs,FPLX,000313,NFkappaB_2 +class 2 NF-kappaBs,FPLX,000313,NFkappaB_2 +Class 2 NF-κBs,FPLX,000313,NFkappaB_2 +class 2 NF-κBs,FPLX,000313,NFkappaB_2 +Class C GPCR,FPLX,000187,GPCR +Class I HDACs,FPLX,000221,HDAC_I +class I HDACs,FPLX,000221,HDAC_I +class I histone deacetylases,FPLX,000221,HDAC_I +Class I NF-kappaBs,FPLX,000312,NFkappaB_1 +class I NF-kappaBs,FPLX,000312,NFkappaB_1 +Class I NF-κBs,FPLX,000312,NFkappaB_1 +class I NF-κBs,FPLX,000312,NFkappaB_1 +class II HDACs,FPLX,000222,HDAC_II +class II histone deacetylases,FPLX,000222,HDAC_II +Class II NF-kappaBs,FPLX,000313,NFkappaB_2 +class II NF-kappaBs,FPLX,000313,NFkappaB_2 +Class II NF-κBs,FPLX,000313,NFkappaB_2 +class II NF-κBs,FPLX,000313,NFkappaB_2 +Class III HDACs,FPLX,000223,HDAC_III +class III HDACs,FPLX,000223,HDAC_III +class III histone deacetylases,FPLX,000223,HDAC_III +Class IV HDACs,FPLX,000224,HDAC_IV +class IV HDACs,FPLX,000224,HDAC_IV +class IV histone deacetylases,FPLX,000224,HDAC_IV +clathrin coat,FPLX,000105,Clathrin +clathrin,FPLX,000105,Clathrin +cleaved PARP,UP,P09874,PARP1_HUMAN +cMet receptor,UP,P08581,MET_HUMAN +CNKSR,FPLX,000106,CNKSR +CO 2,CHEBI,CHEBI:16526,carbon dioxide +CO 2,PUBCHEM,280, +CO,CHEBI,CHEBI:17245,carbon monoxide +CO,PUBCHEM,281, +cocaine,PUBCHEM,446220, +cocaine,CHEBI,CHEBI:27958,cocaine +cofilin,FPLX,000107,Cofilin +cohesin complex,FPLX,000108,Cohesin +cohesin,FPLX,000108,Cohesin +Col4,FPLX,000110,COL4 +COLGALT,FPLX,000112,COLGALT +ColIV,FPLX,000110,COL4 +Collagen beta(1-O)galactosyltransferase,FPLX,000112,COLGALT +Collagen beta(1-O)galactosyltransferases,FPLX,000112,COLGALT +collagen beta(1-O)galactosyltransferase,FPLX,000112,COLGALT +collagen beta(1-O)galactosyltransferases,FPLX,000112,COLGALT +collagen IV,FPLX,000110,COL4 +collagen type I,FPLX,000109,COL1 +Collagen Type IV,FPLX,000110,COL4 +collagen type IV,FPLX,000110,COL4 +collagen type V,FPLX,000111,COL5 +collagen,MESH,D003094,Collagen +collagen,CHEBI,CHEBI:3815,Collagen +complex II,FPLX,000502,ETC_complex_II +complex III,FPLX,000503,ETC_complex_III +Complex IV,FPLX,000113,COX +connector enhancer of kinase suppressor of ras,FPLX,000106,CNKSR +copper,CHEBI,CHEBI:29036,copper(2+) +copper,PUBCHEM,27099, +cortactin,IP,IPR015503, +cortactin,UP,Q14247,SRC8_HUMAN +COX-2,UP,P35354,PGH2_HUMAN +Cox4,FPLX,000114,COX4 +COX6A,FPLX,000115,COX6A +Cox6a,FPLX,000115,COX6A +Cox6b,FPLX,000116,COX6B +COX7A,FPLX,000117,COX7A +Cox7a,FPLX,000117,COX7A +Cox7b,FPLX,000118,COX7B +Cox8,FPLX,000119,COX8 +cPARP,UP,P09874,PARP1_HUMAN +cPLA2,FPLX,000366,PLA2 +CRAF,UP,P04049,RAF1_HUMAN +CREB family,FPLX,000120,CREB +CREB,FPLX,000120,CREB +CRISP,FPLX,000121,CRISP +CRISPs,FPLX,000121,CRISP +Crk,UP,P46108,CRK_HUMAN +CRSP complex,FPLX,000122,CRSP +CRSP,FPLX,000122,CRSP +CRSP/Med complex,FPLX,000122,CRSP +CsA,PUBCHEM,5284373, +CsA,CHEBI,CHEBI:4031,cyclosporin A +CSC,MESH,D014411,Neoplastic Stem Cells +CSF-1R,UP,P07333,CSF1R_HUMAN +CSNK1,FPLX,000124,CSNK1 +CSNK2,FPLX,000125,CSNK2 +CtIP,UP,Q99708,CTIP_HUMAN +cTnC,FPLX,000478,Troponin_C +cTnI,FPLX,000478,Troponin_C +cTnT,FPLX,000480,Troponin_T +cullin proteins,FPLX,000127,CUL +cullin,FPLX,000127,CUL +cullins,FPLX,000127,CUL +Curcumin,CHEBI,CHEBI:3962,curcumin +Curcumin,PUBCHEM,969516, +curcumin,CHEBI,CHEBI:3962,curcumin +curcumin,PUBCHEM,969516, +CXCL12,UP,P48061,SDF1_HUMAN +CXCL8,UP,P10145,IL8_HUMAN +CXCR2,UP,P25025,CXCR2_HUMAN +CXCR4,UP,P61073,CXCR4_HUMAN +cyclic AMP-dependent protein kinase,FPLX,000363,PKA +cyclic-AMP-dependent protein kinase,FPLX,000363,PKA +Cyclin A,FPLX,000131,Cyclin_A +cyclin A,FPLX,000131,Cyclin_A +Cyclin D,FPLX,000132,Cyclin_D +Cyclin D2,UP,P30279,CCND2_HUMAN +cyclin D2,UP,P30279,CCND2_HUMAN +cyclin dependent kinase inhibitors,FPLX,000094,CDKN +cyclin E,FPLX,000133,Cyclin_E +cyclin family,FPLX,000130,Cyclin +Cyclin,FPLX,000130,Cyclin +cyclin,FPLX,000130,Cyclin +Cyclin-A,FPLX,000131,Cyclin_A +cyclin-dependent kinase inhibitor,FPLX,000094,CDKN +cyclin-dependent protein kinase inhibitors,FPLX,000094,CDKN +cyclins,FPLX,000130,Cyclin +cyclophilin,FPLX,000134,Cyclophilin +cyclophilins,FPLX,000134,Cyclophilin +CYLD,UP,Q9NQC7,CYLD_HUMAN +cypermethrin,CHEBI,CHEBI:4042,cypermethrin +cypermethrin,PUBCHEM,2912, +cysteine rich secretory proteins,FPLX,000121,CRISP +cysteine-rich secretory proteins,FPLX,000121,CRISP +cytochrome bc1 complex,FPLX,000503,ETC_complex_III +Cytochrome c oxidase subunit 6a,FPLX,000115,COX6A +cytochrome c oxidase subunit VIII,FPLX,000119,COX8 +cytochrome c oxidase,FPLX,000113,COX +cytochrome C,UP,P99999,CYC_HUMAN +cytochrome c,UP,P99999,CYC_HUMAN +cytokine production,GO,GO:0001816,cytokine production +cytoplasmic dynein,FPLX,000135,Cytoplasmic_dynein +cytosolic phospholipase A(2),FPLX,000366,PLA2 +cytosolic phospholipase A2,FPLX,000366,PLA2 +cytosolic PLA2,FPLX,000366,PLA2 +DA,PUBCHEM,681, +DA,CHEBI,CHEBI:18243,dopamine +dabrafenib,PUBCHEM,44462760, +dabrafenib,CHEBI,CHEBI:75045,dabrafenib +DAG kinase,FPLX,000140,DGK +DAG,PUBCHEM,6026790, +DAG,CHEBI,CHEBI:85682,diacylglycerol 30:1 +damage,MESH,D004249,DNA Damage +Danusertib,PUBCHEM,11442891, +Danusertib,CHEMBL,CHEMBL402548, +Danusertib,CHEBI,CHEBI:94490,"N-[5-[(2R)-2-methoxy-1-oxo-2-phenylethyl]-4,6-dihydro-1H-pyrrolo[3,4-c]pyrazol-3-yl]-4-(4-methyl-1-piperazinyl)benzamide" +danusertib,PUBCHEM,11442891, +danusertib,CHEMBL,CHEMBL402548, +danusertib,CHEBI,CHEBI:94490,"N-[5-[(2R)-2-methoxy-1-oxo-2-phenylethyl]-4,6-dihydro-1H-pyrrolo[3,4-c]pyrazol-3-yl]-4-(4-methyl-1-piperazinyl)benzamide" +dapagliflozin,CHEBI,CHEBI:85078,dapagliflozin +dapagliflozin,PUBCHEM,9887712, +dasatinib,CHEBI,CHEBI:49375,dasatinib (anhydrous) +dasatinib,PUBCHEM,3062316, +DDR,GO,GO:0042769,"DNA damage response, detection of DNA damage" +death receptor,FPLX,000137,Death_receptor +death receptors,FPLX,000137,Death_receptor +death,GO,GO:0008219,cell death +death,MESH,D016923,Cell Death +delta-tubulin,HGNC,16811,TUBD1 +desmoglein,FPLX,000138,Desmoglein +desmogleins,FPLX,000138,Desmoglein +dexamethasone,PUBCHEM,5743, +dexamethasone,CHEBI,CHEBI:41879,dexamethasone +DGC,FPLX,000139,DGC +DGK,FPLX,000140,DGK +DHA,CHEBI,CHEBI:207229,dihydroartemisinin +DHA,PUBCHEM,6918483, +DHT,PUBCHEM,11302, +DHT,CHEBI,CHEBI:2150,5beta-dihydrotestosterone +diacyl glycerol kinase,FPLX,000140,DGK +diacylglycerol kinase,FPLX,000140,DGK +differentiation,GO,GO:0030154,cell differentiation +differentiation,MESH,D002454,Cell Differentiation +diosmetin,CHEBI,CHEBI:4630,diosmetin +diosmetin,PUBCHEM,5281612, +discoidin domain receptor family,FPLX,000136,DDR +discoidin domain receptors,FPLX,000136,DDR +discoidin domain-containing receptor,FPLX,000136,DDR +dishevelled,FPLX,000145,DVL +DNA polymerase delta,FPLX,000141,DNA_polymerase_delta +DNA polymerase δ,FPLX,000141,DNA_polymerase_delta +DNA repair,GO,GO:0006281,DNA repair +DNA repair,MESH,D004260,DNA Repair +DNA replication factor C complex,FPLX,000411,RFC +DNA replication factor C,FPLX,000411,RFC +DNA-PKcs,UP,P78527,PRKDC_HUMAN +DNA-Pkcs,UP,P78527,PRKDC_HUMAN +docetaxel,PUBCHEM,148124, +docetaxel,CHEBI,CHEBI:4672,docetaxel anhydrous +Dok1,UP,Q99704,DOK1_HUMAN +Dok2,UP,O60496,DOK2_HUMAN +dopamine receptor,FPLX,000143,DRD +dopamine receptors,FPLX,000143,DRD +dopamine,PUBCHEM,681, +dopamine,CHEBI,CHEBI:18243,dopamine +doxorubicin,CHEBI,CHEBI:28748,doxorubicin +doxorubicin,PUBCHEM,31703, +doxycycline,PUBCHEM,54671203, +doxycycline,CHEBI,CHEBI:50845,doxycycline +DP complex,FPLX,000464,TFDP +DR4,UP,O00220,TR10A_HUMAN +DR5,UP,O14763,TR10B_HUMAN +DSB,MESH,D053903,"DNA Breaks, Double-Stranded" +DUSP,FPLX,000144,DUSP +DUSP1,UP,P28562,DUS1_HUMAN +Dvl,FPLX,000145,DVL +dynamin family,FPLX,000142,DNM +dynamin,FPLX,000142,DNM +dystrophin glycoprotein complex,FPLX,000139,DGC +dystrophin glycoprotein,FPLX,000139,DGC +dystrophin-associated glycoprotein complex,FPLX,000139,DGC +dystrophin-glycoprotein complex,FPLX,000139,DGC +E-cadherin,UP,P12830,CADH1_HUMAN +E2 enzyme,FPLX,000489,UBE2 +E2 ubiquitin-conjugating enzyme,FPLX,000489,UBE2 +E2,FPLX,000489,UBE2 +E2,UP,P27958,POLG_HCVH +E2F,FPLX,000147,E2F +E2F-1,UP,Q01094,E2F1_HUMAN +E2F1,UP,Q01094,E2F1_HUMAN +E3 ubiquitin ligase,FPLX,000148,E3_Ub_ligase +E3,FPLX,000148,E3_Ub_ligase +E6,UP,P03126,VE6_HPV16 +E7,UP,P03129,VE7_HPV16 +early growth response proteins,FPLX,000151,EGR +EBNA3C,UP,I1YP21, +ECM,GO,GO:0031012,extracellular matrix +Ect2,UP,Q9H8V3,ECT2_HUMAN +EGCG,PUBCHEM,65064, +EGCG,CHEBI,CHEBI:4806,(-)-epigallocatechin 3-gallate +EGF receptor,UP,P00533,EGFR_HUMAN +EGF,UP,P01133,EGF_HUMAN +EGFR ligand,FPLX,000150,EGFR_ligand +EGFR ligands,FPLX,000150,EGFR_ligand +EGFR,UP,P00533,EGFR_HUMAN +EGFRvIII,UP,P00533,EGFR_HUMAN +EGR,FPLX,000151,EGR +eIF2alpha,UP,P05198,IF2A_HUMAN +EIF2B,FPLX,000152,EIF2B +eIF2B,FPLX,000152,EIF2B +eIF2α,UP,P05198,IF2A_HUMAN +eIF4A,FPLX,000153,EIF4A +eIF4E,UP,P06730,IF4E_HUMAN +eIF4G,FPLX,000155,EIF4G +elastase,FPLX,000156,ELA +Elk-1,UP,P19419,ELK1_HUMAN +Elk1,UP,P19419,ELK1_HUMAN +ELMO1,UP,Q92556,ELMO1_HUMAN +ELR (+) CXC chemokines,FPLX,000129,CXCL_ELR_positive +ELR (-) CXC chemokines,FPLX,000128,CXCL_ELR_negative +ELR-negative CXC chemokine,FPLX,000128,CXCL_ELR_negative +ELR-negative CXC family,FPLX,000128,CXCL_ELR_negative +ELR-positive CXC chemokine,FPLX,000129,CXCL_ELR_positive +ELR-positive CXC family,FPLX,000129,CXCL_ELR_positive +embelin,CHEBI,CHEBI:4778,embelin +embelin,PUBCHEM,3218, +emodin,PUBCHEM,3220, +emodin,CHEBI,CHEBI:42223,emodin +EMT,GO,GO:0001837,epithelial to mesenchymal transition +EMT,MESH,D058750,Epithelial-Mesenchymal Transition +endocytosis,GO,GO:0006897,endocytosis +endocytosis,MESH,D004705,Endocytosis +endothelin,FPLX,000149,EDN +endothelins,FPLX,000149,EDN +enolase,FPLX,000157,ENO +eNOS,UP,P29474,NOS3_HUMAN +Env,UP,U3LIR9, +Eph receptor,FPLX,000158,Ephrin_receptor +Eph receptors,FPLX,000158,Ephrin_receptor +EphA2,UP,P29317,EPHA2_HUMAN +EphB1,UP,P54762,EPHB1_HUMAN +ephrin receptor,FPLX,000158,Ephrin_receptor +epidermal growth factor receptor,UP,P00533,EGFR_HUMAN +epidermal growth factor,UP,P01133,EGF_HUMAN +Eps8,UP,Q12929,EPS8_HUMAN +epsilon-tubulin,HGNC,20775,TUBE1 +epsin,FPLX,000159,EPN +epsins,FPLX,000159,EPN +ER,FPLX,000162,ESR +ER,MESH,D004721,Endoplasmic Reticulum +ER,GO,GO:0005783,endoplasmic reticulum +ER,UP,P03372,ESR1_HUMAN +ERalpha,UP,P03372,ESR1_HUMAN +ErbB,FPLX,000160,ERBB +ERBB2,UP,P04626,ERBB2_HUMAN +ErbB2,UP,P04626,ERBB2_HUMAN +ErbB3,UP,P21860,ERBB3_HUMAN +ERK 1/2,FPLX,000161,ERK +ERK inhibitors,CHEBI,CHEBI:79091,EC 2.7.11.24 (mitogen-activated protein kinase) inhibitor +ERK MAPK,FPLX,000161,ERK +ERK mitogen-activated protein kinase,FPLX,000161,ERK +ERK,FPLX,000161,ERK +Erk,FPLX,000161,ERK +ERK-1/2,FPLX,000161,ERK +ERK1,UP,P27361,MK03_HUMAN +Erk1,UP,P27361,MK03_HUMAN +ERK1/2 MAPK,FPLX,000161,ERK +ERK1/2,FPLX,000161,ERK +Erk1/2,FPLX,000161,ERK +ERK2,UP,P28482,MK01_HUMAN +ERK5,UP,Q13164,MK07_HUMAN +ERKs,FPLX,000161,ERK +erlotinib,PUBCHEM,176870, +erlotinib,CHEBI,CHEBI:114785,erlotinib +ERα,UP,P03372,ESR1_HUMAN +ESR,FPLX,000162,ESR +estradiol,CHEBI,CHEBI:23965,estradiol +estradiol,PUBCHEM,9811784, +estrogen receptor,UP,P03372,ESR1_HUMAN +estrogen,CHEBI,CHEBI:50114,estrogen +ET-1,UP,P05305,EDN1_HUMAN +ethanol,PUBCHEM,702, +ethanol,CHEBI,CHEBI:16236,ethanol +ethanol,HMDB,HMDB00108, +etoposide,PUBCHEM,36462, +etoposide,CHEBI,CHEBI:4911,etoposide +ETS,FPLX,000163,ETS +ETS-1,UP,P14921,ETS1_HUMAN +Ets-1,UP,P14921,ETS1_HUMAN +ETS1,UP,P14921,ETS1_HUMAN +eukaryotic initiation factor 4E,UP,P06730,IF4E_HUMAN +eukaryotic initiation factor-4A,FPLX,000153,EIF4A +Everolimus,PUBCHEM,6442177, +Everolimus,CHEBI,CHEBI:68478,everolimus +everolimus,PUBCHEM,6442177, +everolimus,CHEBI,CHEBI:68478,everolimus +EXOC,FPLX,000164,EXOC +exocyst complex,FPLX,000164,EXOC +exocyst,FPLX,000164,EXOC +Exostosin glycosyltransferase family,FPLX,000165,EXT +exostosin glycosyltransferase family,FPLX,000165,EXT +EXT,FPLX,000165,EXT +Extracellular Signal Regulated Kinase,FPLX,000161,ERK +extracellular signal-regulated kinase,FPLX,000161,ERK +EZH2,UP,Q15910,EZH2_HUMAN +ezrin,UP,P15311,EZRI_HUMAN +F-actin,FPLX,000178,F_actin +FADD,UP,Q13158,FADD_HUMAN +FAK,UP,Q05397,FAK1_HUMAN +FAM83B,UP,Q5T0W9,FA83B_HUMAN +FANC proteins,FPLX,000166,FANC +FANC,FPLX,000166,FANC +FANCJ,UP,Q9BX63,FANCJ_HUMAN +farnesyltransferase,FPLX,000172,FNT +Fas,UP,P25445,TNR6_HUMAN +FasL,UP,P48023,TNFL6_HUMAN +FGF,FPLX,000167,FGF +FGF-2,UP,P09038,FGF2_HUMAN +FGF2,UP,P09038,FGF2_HUMAN +FGFR,FPLX,000168,FGFR +FGFR1,UP,P11362,FGFR1_HUMAN +FGFR2,UP,P21802,FGFR2_HUMAN +FGFR3,UP,P22607,FGFR3_HUMAN +FGFR4,UP,P22455,FGFR4_HUMAN +fibrinogen,FPLX,000169,Fibrinogen +fibronectin,UP,P02751,FINC_HUMAN +fisetin,CHEBI,CHEBI:42567,fisetin +fisetin,PUBCHEM,5281614, +Flip,UP,O15519,CFLAR_HUMAN +flotillin,FPLX,000170,FLOT +FLRT family,FPLX,000171,FLRT +Flrt family,FPLX,000171,FLRT +FLRT proteins,FPLX,000171,FLRT +FLT3,UP,P36888,FLT3_HUMAN +FN,UP,P02751,FINC_HUMAN +follicle-stimulating hormone,FPLX,000175,FSH +FOS,FPLX,000173,FOS_family +Fos,FPLX,000173,FOS_family +FOXM1,UP,Q08050,FOXM1_HUMAN +FOXO,FPLX,000174,FOXO +FoxO,FPLX,000174,FOXO +FOXO1,UP,Q12778,FOXO1_HUMAN +FoxO1,UP,Q12778,FOXO1_HUMAN +FOXO3,UP,O43524,FOXO3_HUMAN +FOXO3a,UP,O43524,FOXO3_HUMAN +FoxO3a,UP,O43524,FOXO3_HUMAN +FRK,UP,P42685,FRK_HUMAN +fructose-bisphosphate aldolase,FPLX,000025,ALDO +FSH,FPLX,000175,FSH +FTase,FPLX,000172,FNT +FTS,PUBCHEM,5469318, +Fucosyltransferase,FPLX,000176,FUT +Fucosyltransferases,FPLX,000176,FUT +fucosyltransferase,FPLX,000176,FUT +fucosyltransferases,FPLX,000176,FUT +FUT,FPLX,000176,FUT +Fyn,UP,P06241,FYN_HUMAN +Fz,FPLX,000177,FZD +FZD,FPLX,000177,FZD +G 1,GO,GO:0051318,G1 phase +G 1,MESH,D016193,G1 Phase +G 2,MESH,D016195,G2 Phase +G alphai,FPLX,000213,G_i_alpha +G alphaq,FPLX,000216,G_q_alpha +G alphaS,FPLX,000218,G_s_alpha +G protein beta,FPLX,000210,G_beta +G protein gamma subunit,FPLX,000211,G_gamma +G protein gamma,FPLX,000211,G_gamma +G protein Gs,FPLX,000217,G_s +G protein γ subunit,FPLX,000211,G_gamma +G protein β,FPLX,000210,G_beta +G protein γ,FPLX,000211,G_gamma +G protein(s),FPLX,000217,G_s +G protein,FPLX,000214,G_protein +G protein-coupled receptor kinases,FPLX,000192,GRK +G proteins,FPLX,000214,G_protein +G S protein,FPLX,000217,G_s +G αi,FPLX,000213,G_i_alpha +G αq,FPLX,000216,G_q_alpha +G αS,FPLX,000218,G_s_alpha +G(12),FPLX,000207,G_12 +G(q/11),FPLX,000215,G_q +G-alpha(s),FPLX,000218,G_s_alpha +G-AlphaS,FPLX,000218,G_s_alpha +G-protein alpha-12,FPLX,000208,G_12_alpha +G-Protein alpha-i,FPLX,000213,G_i_alpha +G-Protein alpha-q,FPLX,000216,G_q_alpha +G-Protein alpha-s,FPLX,000218,G_s_alpha +G-protein beta,FPLX,000210,G_beta +G-protein β,FPLX,000210,G_beta +G-protein α-12,FPLX,000208,G_12_alpha +G-Protein α-i,FPLX,000213,G_i_alpha +G-Protein α-q,FPLX,000216,G_q_alpha +G-Protein α-s,FPLX,000218,G_s_alpha +G-α(s),FPLX,000218,G_s_alpha +G-αS,FPLX,000218,G_s_alpha +G12 family,FPLX,000207,G_12 +G12 proteins,FPLX,000207,G_12 +G12,FPLX,000207,G_12 +GA,PUBCHEM,370, +GA,CHEBI,CHEBI:30778,gallic acid +Ga12,FPLX,000208,G_12_alpha +Gab1,UP,Q13480,GAB1_HUMAN +Gab2,UP,Q9UQC2,GAB2_HUMAN +GABA receptor,FPLX,000179,GABR +GABA receptors,FPLX,000179,GABR +GABA-A receptor,FPLX,000179,GABR +GALNT,FPLX,000180,GALNT +Galpha12,FPLX,000208,G_12_alpha +Galphai,FPLX,000213,G_i_alpha +Galphaq,FPLX,000216,G_q_alpha +GalphaS,FPLX,000218,G_s_alpha +gamma secretase,FPLX,000181,Gamma_secretase +Gamma tubulin,FPLX,000485,TUBG +gamma tubulin,FPLX,000485,TUBG +gamma-aminobutyric-acid A receptor,FPLX,000179,GABR +gamma-secretase,FPLX,000181,Gamma_secretase +gamma-tubulin,FPLX,000485,TUBG +GAP,FPLX,000182,GAP +Gas6 receptors,FPLX,000183,GAS6_receptor +gastrin,UP,P01350,GAST_HUMAN +GATA family,FPLX,000184,GATA +GATA,FPLX,000184,GATA +Gbeta,FPLX,000210,G_beta +GCNT,FPLX,000185,GCNT +GDF15,UP,Q99988,GDF15_HUMAN +GDP,HMDB,HMDB01201, +GDP,PUBCHEM,135398619, +GDP,CHEBI,CHEBI:17552,GDP +GEF,FPLX,000186,GEF +GEF-H1,UP,Q92974,ARHG2_HUMAN +gefitinib,PUBCHEM,123631, +gefitinib,CHEBI,CHEBI:49668,gefitinib +GEFs,FPLX,000186,GEF +general transcription factor II E,FPLX,000196,GTF2E +general transcription factor II F,FPLX,000197,GTF2F +genistein,CHEBI,CHEBI:28088,genistein +genistein,PUBCHEM,5280961, +Gi alpha subunit,FPLX,000213,G_i_alpha +Gi alpha,FPLX,000213,G_i_alpha +Gi protein,FPLX,000212,G_i +Gi α subunit,FPLX,000213,G_i_alpha +Gi α,FPLX,000213,G_i_alpha +Gi,FPLX,000212,G_i +GII PLA2,FPLX,000367,PLA2G2 +GIIPLA2,FPLX,000367,PLA2G2 +gIV-PLA(2),FPLX,000368,PLA2G4 +glucose transporter,FPLX,000434,SLC2A +glucose transporters,FPLX,000434,SLC2A +Glucose,HMDB,HMDB00122, +glucose,HMDB,HMDB00122, +GLUT,FPLX,000434,SLC2A +glutamate metabotropic receptors,FPLX,000193,GRM +glutathione peroxidase,FPLX,000190,GPX +glutathione S-transferase,FPLX,000195,GST +glutathione,PUBCHEM,124886, +glutathione,CHEBI,CHEBI:16856,glutathione +glutathione,HMDB,HMDB00125, +Glycogen phosphorylase,FPLX,000396,PYG +Glycogen phosphorylases,FPLX,000396,PYG +glycogen phosphorylase,FPLX,000396,PYG +glycogen phosphorylases,FPLX,000396,PYG +glycogen synthase,FPLX,000206,GYS +glycolysis,GO,GO:0006096,glycolytic process +glycolysis,MESH,D006019,Glycolysis +glycoprotein Ib-V-IX complex,FPLX,000188,GPIb_IX_V +Glycoprotein Ib-V-IX,FPLX,000188,GPIb_IX_V +Glycoprotein Ib/V/IX,FPLX,000188,GPIb_IX_V +glycosylphosphatidylinositol transamidase complex,FPLX,000189,GPIT +Glycosyltransferase family 2,FPLX,000199,GTF_family_2 +glycosyltransferase family 2,FPLX,000199,GTF_family_2 +Glycosyltransferase family 29,FPLX,000202,GTF_family_29 +glycosyltransferase family 29,FPLX,000202,GTF_family_29 +Glycosyltransferase family 6,FPLX,000200,GTF_family_6 +glycosyltransferase family 6,FPLX,000200,GTF_family_6 +Glycosyltransferase family 8,FPLX,000201,GTF_family_8 +glycosyltransferase family 8,FPLX,000201,GTF_family_8 +Glycosyltransferase family 90,FPLX,000203,GTF_family_90 +glycosyltransferase family 90,FPLX,000203,GTF_family_90 +gp120,UP,P04578,ENV_HV1H2 +gp47 phox,UP,P14598,NCF1_HUMAN +gp91 phox,UP,P04839,CY24B_HUMAN +GPCR kinases,FPLX,000192,GRK +GPCR,FPLX,000187,GPCR +GPCRs,FPLX,000187,GPCR +GPI transamidase complex,FPLX,000189,GPIT +GPIb-IX-V complex,FPLX,000188,GPIb_IX_V +GPIb-IX-V,FPLX,000188,GPIb_IX_V +GpIb-V-IX,FPLX,000188,GPIb_IX_V +GPIT complex,FPLX,000189,GPIT +GPIT,FPLX,000189,GPIT +Gq alpha subunit,FPLX,000216,G_q_alpha +Gq alpha,FPLX,000216,G_q_alpha +Gq α subunit,FPLX,000216,G_q_alpha +Gq α,FPLX,000216,G_q_alpha +Gq/11,FPLX,000215,G_q +GR,UP,P00390,GSHR_HUMAN +GRB2,UP,P62993,GRB2_HUMAN +Grb2,UP,P62993,GRB2_HUMAN +GRK,FPLX,000192,GRK +GRKs,FPLX,000192,GRK +group IV-PLA(2),FPLX,000368,PLA2G4 +GRP78,UP,P11021,BIP_HUMAN +Gs alpha subunit,FPLX,000218,G_s_alpha +Gs alpha,FPLX,000218,G_s_alpha +Gs family,FPLX,000217,G_s +Gs protein,FPLX,000217,G_s +Gs α subunit,FPLX,000218,G_s_alpha +Gs α,FPLX,000218,G_s_alpha +GSH,PUBCHEM,124886, +GSH,CHEBI,CHEBI:16856,glutathione +GSH,HMDB,HMDB00125, +GSK-3,FPLX,000194,GSK3 +GSK-3beta,UP,P49841,GSK3B_HUMAN +GSK-3β,UP,P49841,GSK3B_HUMAN +GSK3,FPLX,000194,GSK3 +GSK3beta,UP,P49841,GSK3B_HUMAN +GSK3β,UP,P49841,GSK3B_HUMAN +GST,FPLX,000195,GST +GSTs,FPLX,000195,GST +GTP,HMDB,HMDB01273, +GTP,CHEBI,CHEBI:15996,GTP +GTP,PUBCHEM,135398633, +GTPase,FPLX,000204,GTPase +GTPase-activating proteins,FPLX,000182,GAP +guanine,PUBCHEM,135398634, +guanine,CHEBI,CHEBI:16235,guanine +guanylate cyclase,FPLX,000205,GUCY +guanylyl cyclase,FPLX,000205,GUCY +G_alpha,FPLX,000209,G_alpha +G_α,FPLX,000209,G_alpha +Gβ,FPLX,000210,G_beta +Gα12,FPLX,000208,G_12_alpha +Gαi,FPLX,000213,G_i_alpha +Gαq,FPLX,000216,G_q_alpha +GαS,FPLX,000218,G_s_alpha +H-Ras,UP,P01112,RASH_HUMAN +H/R,MESH,D015687,Cell Hypoxia +H2AX,UP,P16104,H2AX_HUMAN +H2B,FPLX,000236,Histone_H2B +H3,FPLX,000237,Histone_H3 +h9-1-1 complex,FPLX,000001,9_1_1 +haem oxygenase,FPLX,000240,HMOX +hAxin,FPLX,000062,AXIN +HB-EGF,UP,Q99075,HBEGF_HUMAN +HBx,UP,Q157B2, +hCG,FPLX,000219,hCG +HDAC inhibitor,CHEBI,CHEBI:61115,EC 3.5.1.98 (histone deacetylase) inhibitor +HDAC,FPLX,000220,HDAC +HDAC1,UP,Q13547,HDAC1_HUMAN +HDAC2,UP,Q92769,HDAC2_HUMAN +HDAC3,UP,O15379,HDAC3_HUMAN +HDACi,CHEBI,CHEBI:61115,EC 3.5.1.98 (histone deacetylase) inhibitor +HDL,FPLX,000225,HDL +HDM2,UP,Q00987,MDM2_HUMAN +Heat Shock Protein 70,FPLX,000244,HSPA +heat shock protein family B,FPLX,000245,HSPB +Hedgehog family,FPLX,000226,Hedgehog +hedgehog protein,FPLX,000226,Hedgehog +hedgehog signaling proteins,FPLX,000226,Hedgehog +Hedgehog,FPLX,000226,Hedgehog +heme oxygenase,FPLX,000240,HMOX +hemoglobin,FPLX,000227,Hemoglobin +HER-2,UP,P04626,ERBB2_HUMAN +HER2 receptor,UP,P04626,ERBB2_HUMAN +HER2,UP,P04626,ERBB2_HUMAN +HER3,UP,P21860,ERBB3_HUMAN +Hes gene family,FPLX,000228,HES +Hes genes,FPLX,000228,HES +HES,FPLX,000228,HES +Hes,FPLX,000228,HES +HG,HMDB,HMDB00122, +HGF,UP,P14210,HGF_HUMAN +Hic-5,UP,O43294,TGFI1_HUMAN +HIF,FPLX,000229,HIF +HIF-1,FPLX,000230,HIF1 +HIF-1alpha protein,UP,Q16665,HIF1A_HUMAN +HIF-1alpha,UP,Q16665,HIF1A_HUMAN +HIF-1α protein,UP,Q16665,HIF1A_HUMAN +HIF-1α,UP,Q16665,HIF1A_HUMAN +HIF1alpha protein,UP,Q16665,HIF1A_HUMAN +HIF1alpha,UP,Q16665,HIF1A_HUMAN +HIF1α protein,UP,Q16665,HIF1A_HUMAN +HIF1α,UP,Q16665,HIF1A_HUMAN +HIFalpha,FPLX,000231,HIF_alpha +Hifalpha,FPLX,000231,HIF_alpha +HIFbeta,FPLX,000232,HIF_beta +Hifbeta,FPLX,000232,HIF_beta +HIFs,FPLX,000229,HIF +HIFα,FPLX,000231,HIF_alpha +Hifα,FPLX,000231,HIF_alpha +HIFβ,FPLX,000232,HIF_beta +Hifβ,FPLX,000232,HIF_beta +High-density lipoproteins,FPLX,000225,HDL +HIPK2,UP,Q9H2X6,HIPK2_HUMAN +Histone 2A,FPLX,000235,Histone_H2A +histone deacetylase,FPLX,000220,HDAC +histone deacetylases,FPLX,000220,HDAC +histone H1,FPLX,000234,Histone_H1 +Histone H2A,FPLX,000235,Histone_H2A +histone H2A,FPLX,000235,Histone_H2A +histone H2B,FPLX,000236,Histone_H2B +histone H3,FPLX,000237,Histone_H3 +histone H4,FPLX,000238,Histone_H4 +Histone,FPLX,000233,Histone +histone,FPLX,000233,Histone +histone-3,FPLX,000237,Histone_H3 +histones,FPLX,000233,Histone +HLA-DR,FPLX,000239,HLA_DR +HMGB1,UP,P09429,HMGB1_HUMAN +HO-1,UP,P09601,HMOX1_HUMAN +homeodomain iroquois proteins,FPLX,000265,IRX +HOTAIR,HGNC,33510,HOTAIR +HOTAIR,NONCODE,NONHSAT028507.2, +HOTAIR,LNCRNADB,HOTAIR, +HR,GO,GO:0000725,recombinational repair +HR,MESH,D059767,Recombinational DNA Repair +HRAS,UP,P01112,RASH_HUMAN +HRASV12,UP,P01112,RASH_HUMAN +HSF1,UP,Q00613,HSF1_HUMAN +HSP20,UP,O14558,HSPB6_HUMAN +HSP27,UP,P04792,HSPB1_HUMAN +HSP70,FPLX,000244,HSPA +Hsp70,FPLX,000244,HSPA +HSP90,FPLX,000241,HSP90 +Hsp90,FPLX,000241,HSP90 +HSP90A,FPLX,000242,HSP90A +HSP90AA,FPLX,000243,HSP90AA +HSPB proteins,FPLX,000245,HSPB +HSPB,FPLX,000245,HSPB +hTERT,UP,O14746,TERT_HUMAN +HuR,HGNC,3312,ELAVL1 +HuR,UP,Q15717,ELAV1_HUMAN +hydrogen peroxide,PUBCHEM,784, +hydrogen peroxide,CHEBI,CHEBI:16240,hydrogen peroxide +hypoxia-inducible factors,FPLX,000229,HIF +I/R,MESH,D011839,"Radiation, Ionizing" +ICAM-1,UP,P05362,ICAM1_HUMAN +IER3,UP,P46695,IEX1_HUMAN +IFI16,UP,Q16666,IF16_HUMAN +IFN,FPLX,000262,Interferon +IFN-a,FPLX,000246,IFNA +IFN-alpha,FPLX,000246,IFNA +IFN-beta,FPLX,000247,IFNB +IFN-beta,UP,P01574,IFNB_HUMAN +IFN-gamma,UP,P01579,IFNG_HUMAN +IFN-α,FPLX,000246,IFNA +IFN-β,FPLX,000247,IFNB +IFN-β,UP,P01574,IFNB_HUMAN +IFN-γ,UP,P01579,IFNG_HUMAN +IFNalpha,FPLX,000246,IFNA +IFNgamma,UP,P01579,IFNG_HUMAN +IFNGR,FPLX,000263,Interferon_gamma_receptor +IFNα,FPLX,000246,IFNA +IFNγ,UP,P01579,IFNG_HUMAN +IGF-1,UP,P05019,IGF1_HUMAN +IGF-1R,UP,P08069,IGF1R_HUMAN +IGF-1Rbeta,UP,P08069,IGF1R_HUMAN +IGF-1Rβ,UP,P08069,IGF1R_HUMAN +IGF-BP,FPLX,000248,IGFBP +IGF-I,UP,P05019,IGF1_HUMAN +IGF-IR,UP,P08069,IGF1R_HUMAN +IGF1,UP,P05019,IGF1_HUMAN +IGF1R,UP,P08069,IGF1R_HUMAN +IGFBP,FPLX,000248,IGFBP +IGFBPs,FPLX,000248,IGFBP +IkappaB kinase,FPLX,000251,IKK_family +IkappaB,FPLX,000249,IKB +IkappaB-alpha,HGNC,7797,NFKBIA +IkappaBalpha,UP,P25963,IKBA_HUMAN +IKK complex,FPLX,000250,IKK_complex +IKK,FPLX,000251,IKK_family +IKKalpha,UP,O15111,IKKA_HUMAN +IKKbeta,UP,O14920,IKKB_HUMAN +IKKβ,UP,O14920,IKKB_HUMAN +IKKα,UP,O15111,IKKA_HUMAN +IL-1,FPLX,000252,IL1 +IL-10,UP,P22301,IL10_HUMAN +IL-12,FPLX,000253,IL12 +IL-15 receptor,FPLX,000254,IL15R +IL-15R,FPLX,000254,IL15R +IL-17,UP,Q16552,IL17_HUMAN +IL-18,UP,Q14116,IL18_HUMAN +IL-1beta,UP,P01584,IL1B_HUMAN +IL-1β,UP,P01584,IL1B_HUMAN +IL-2 receptor,FPLX,000255,IL2R +IL-2,UP,P60568,IL2_HUMAN +IL-2R,FPLX,000255,IL2R +IL-4,UP,P05112,IL4_HUMAN +IL-6,UP,P05231,IL6_HUMAN +IL-8,UP,P10145,IL8_HUMAN +IL1 family,FPLX,000252,IL1 +IL12,FPLX,000253,IL12 +imatinib,PUBCHEM,5291, +imatinib,LINCS,10023-103, +imatinib,CHEBI,CHEBI:45783,imatinib +immune response,GO,GO:0006955,immune response +infiltration,MESH,D009361,Neoplasm Invasiveness +inflammation,GO,GO:0006954,inflammatory response +inflammation,MESH,D007249,Inflammation +inflammatory response,GO,GO:0006954,inflammatory response +inflammatory response,MESH,0007249, +inhibin A,FPLX,000257,Inhibin_A +inhibin B,FPLX,000258,Inhibin_B +Inhibin,FPLX,000256,Inhibin +inhibin,FPLX,000256,Inhibin +inhibin-A,FPLX,000257,Inhibin_A +inhibin-a,FPLX,000257,Inhibin_A +inhibin-B,FPLX,000258,Inhibin_B +inhibin-b,FPLX,000258,Inhibin_B +initiation factor 4E binding proteins,FPLX,000154,EIF4EBP +iNOS,UP,P35228,NOS2_HUMAN +insulin family,FPLX,000259,INS +Insulin receptor family,FPLX,000260,INSR +insulin receptor family,FPLX,000260,INSR +insulin receptor substrate,FPLX,000264,IRS +insulin receptor,UP,P06213,INSR_HUMAN +insulin receptor/insulin-like growth factor receptor family,FPLX,000260,INSR +Insulin,UP,P01308,INS_HUMAN +insulin,UP,P01308,INS_HUMAN +insulin-like growth factor binding proteins,FPLX,000248,IGFBP +integrin,FPLX,000261,Integrins +integrins,FPLX,000261,Integrins +Interferon beta,FPLX,000247,IFNB +interferon beta,FPLX,000247,IFNB +interferon gamma receptor,FPLX,000263,Interferon_gamma_receptor +interferon γ receptor,FPLX,000263,Interferon_gamma_receptor +Interferon β,FPLX,000247,IFNB +interferon β,FPLX,000247,IFNB +interferon,FPLX,000262,Interferon +interferon-gamma receptor,FPLX,000263,Interferon_gamma_receptor +interferon-γ receptor,FPLX,000263,Interferon_gamma_receptor +invasion,MESH,D009361,Neoplasm Invasiveness +invasiveness,MESH,D009361,Neoplasm Invasiveness +IQGAP1,UP,P46940,IQGA1_HUMAN +IR,MESH,D011839,"Radiation, Ionizing" +IR,UP,P06213,INSR_HUMAN +IRF3,UP,Q14653,IRF3_HUMAN +iron,PUBCHEM,23925, +iron,CHEBI,CHEBI:18248,iron atom +Iroquois family,FPLX,000265,IRX +Iroquois proteins,FPLX,000265,IRX +Iroquois-class homeodomain proteins,FPLX,000265,IRX +IRS family,FPLX,000264,IRS +IRS,FPLX,000264,IRS +IRS-1,UP,P35568,IRS1_HUMAN +IRS-2,UP,Q9Y4H2,IRS2_HUMAN +IRS1,UP,P35568,IRS1_HUMAN +IRS2,UP,Q9Y4H2,IRS2_HUMAN +isoflurane,PUBCHEM,3763, +isoflurane,CHEBI,CHEBI:6015,isoflurane +IκB kinase,FPLX,000251,IKK_family +IκB,FPLX,000249,IKB +IκB-α,HGNC,7797,NFKBIA +IκBα,UP,P25963,IKBA_HUMAN +JAK,FPLX,000266,JAK +Jak,FPLX,000266,JAK +JAK2,UP,O60674,JAK2_HUMAN +JAKs,FPLX,000266,JAK +JNK MAPK,FPLX,000267,JNK +JNK,FPLX,000267,JNK +JNK1,UP,P45983,MK08_HUMAN +JNK1/2,FPLX,000267,JNK +JNKs,FPLX,000267,JNK +JQ1,PUBCHEM,46907787, +JQ1,CHEBI,CHEBI:95080,LSM-6332 +JUN,FPLX,000268,JUN_family +K-Ras,UP,P01116,RASK_HUMAN +Kainate receptors,FPLX,000269,Kainate_family +kallikrein,FPLX,000271,KLK +kallikrein-related peptidases,FPLX,000271,KLK +KARs,FPLX,000269,Kainate_family +Keap1,UP,Q14145,KEAP1_HUMAN +kinetochore centromere binding factor 3,FPLX,000084,CBF3 +kinetochore complex,FPLX,000270,Kinetochore +kinetochore,FPLX,000270,Kinetochore +kinetochores,FPLX,000270,Kinetochore +KLF5,UP,Q13887,KLF5_HUMAN +Klf5,UP,Q13887,KLF5_HUMAN +KLKs,FPLX,000271,KLK +KRAS,UP,P01116,RASK_HUMAN +Kras,UP,P01116,RASK_HUMAN +KSR,FPLX,000272,KSR +LA,CHEBI,CHEBI:30314,(R)-lipoic acid +LA,PUBCHEM,6112, +lactate,PUBCHEM,91435, +lactate,CHEBI,CHEBI:24996,lactate +laminin 332 chains,FPLX,000274,Laminin_332 +laminin 332,FPLX,000274,Laminin_332 +laminin-332 chains,FPLX,000274,Laminin_332 +laminin-332,FPLX,000274,Laminin_332 +Laminin-5,FPLX,000274,Laminin_332 +laminin-5,FPLX,000274,Laminin_332 +lapatinib,PUBCHEM,208908, +lapatinib,CHEBI,CHEBI:49603,lapatinib +LAT,UP,O43561,LAT_HUMAN +LC3,FPLX,000280,MAP1LC3 +Lck,UP,P06239,LCK_HUMAN +LDH,FPLX,000275,LDH +lead,PUBCHEM,5352425, +lead,CHEBI,CHEBI:25016,lead atom +leptin,UP,P41159,LEP_HUMAN +LFA-1 (integrin),FPLX,000261,Integrins +LH,FPLX,000276,LH +LIF,UP,P15018,LIF_HUMAN +lipopolysaccharide,CHEBI,CHEBI:16412,lipopolysaccharide +lipopolysaccharide,MESH,D008070,Lipopolysaccharides +LKB1,UP,Q15831,STK11_HUMAN +LM-1,FPLX,000273,Laminin_111 +LMP1,UP,P03230,LMP1_EBVB9 +localization,GO,GO:0051179,localization +long-chain acyl-CoA synthetase,FPLX,000008,ACSL +LPA,UP,P08519,APOA_HUMAN +LPS,CHEBI,CHEBI:16412,lipopolysaccharide +LPS,MESH,D008070,Lipopolysaccharides +LRRK2,UP,Q5S007,LRRK2_HUMAN +Luteinizing hormone,FPLX,000276,LH +luteinizing hormone,FPLX,000276,LH +luteinizing-hormone,FPLX,000276,LH +luteolin,PUBCHEM,5280445, +luteolin,CHEBI,CHEBI:15864,luteolin +MA,PUBCHEM,10836, +MA,CHEBI,CHEBI:6809,methamphetamine +MA,PUBCHEM,73659, +MA,CHEBI,CHEBI:66682,maslinic acid +MA,UP,P04591,GAG_HV1H2 +MAC,FPLX,000278,MAC +MAC-1 (integrin),FPLX,000261,Integrins +Mad2,UP,Q13257,MD2L1_HUMAN +Maf subfamily,FPLX,000279,MAF +MAF,FPLX,000279,MAF +Maf,FPLX,000279,MAF +maf,FPLX,000279,MAF +MAF,UP,O75444,MAF_HUMAN +Maf,UP,O75444,MAF_HUMAN +maf,UP,O75444,MAF_HUMAN +mammalian target of rapamycin,UP,P42345,MTOR_HUMAN +mangiferin,CHEBI,CHEBI:6682,mangiferin +mangiferin,PUBCHEM,5281647, +MAP kinase,FPLX,000283,MAPK +MAP kinases,FPLX,000283,MAPK +MAP2K1,UP,Q02750,MP2K1_HUMAN +MAP2K2,UP,P36507,MP2K2_HUMAN +MAP3K,FPLX,000282,MAP3K +MAP3K2,UP,Q9Y2U5,M3K2_HUMAN +MAPK kinase kinase,FPLX,000282,MAP3K +MAPK kinase,FPLX,000281,MAP2K +MAPK p38,FPLX,000326,p38 +MAPK,FPLX,000161,ERK +MAPK1,UP,P28482,MK01_HUMAN +MAPK3,UP,P27361,MK03_HUMAN +MAPKK kinases,FPLX,000282,MAP3K +MAPKKK,FPLX,000282,MAP3K +MAPKs,FPLX,000283,MAPK +MAZ,UP,P56270,MAZ_HUMAN +Mcl-1,UP,Q07820,MCL1_HUMAN +MCM,FPLX,000284,MCM +MCP-1,UP,P0CW71, +MDM2,UP,Q00987,MDM2_HUMAN +Mdm2,UP,Q00987,MDM2_HUMAN +MDMX,UP,O15151,MDM4_HUMAN +Mdmx,UP,O15151,MDM4_HUMAN +MED14,UP,O60244,MED14_HUMAN +MED23,UP,Q9ULK4,MED23_HUMAN +MEF2 family,FPLX,000285,MEF2 +MEF2,FPLX,000285,MEF2 +MEF2C,UP,Q06413,MEF2C_HUMAN +MEK 1/2,FPLX,000286,MEK +MEK inhibitor,CHEBI,CHEBI:88286,EC 2.7.12.2 (mitogen-activated protein kinase kinase) inhibitor +MEK inhibitors,CHEBI,CHEBI:88286,EC 2.7.12.2 (mitogen-activated protein kinase kinase) inhibitor +MEK,FPLX,000286,MEK +MEK1,UP,Q02750,MP2K1_HUMAN +MEK1/2,FPLX,000286,MEK +melanin,PUBCHEM,6325610, +melanin,CHEBI,CHEBI:89634,Melanin +melatonin,CHEBI,CHEBI:16796,melatonin +melatonin,PUBCHEM,896, +membrane attack complex,FPLX,000278,MAC +membrane attack,FPLX,000278,MAC +MET,UP,P08581,MET_HUMAN +Met,UP,P08581,MET_HUMAN +metabolism,GO,GO:0008152,metabolic process +metabolism,MESH,D008660,Metabolism +metabotrophic glutamate receptor,FPLX,000193,GRM +metabotropic glutamate receptor,FPLX,000193,GRM +metastasis,MESH,D009362,Neoplasm Metastasis +Metformin,PUBCHEM,4091, +Metformin,CHEBI,CHEBI:6801,metformin +metformin,PUBCHEM,4091, +metformin,CHEBI,CHEBI:6801,metformin +Metallothionein,FPLX,000292,Metallothionein +metallothionein,FPLX,000292,Metallothionein +MG132,PUBCHEM,462382, +MG132,CHEBI,CHEBI:75142,N-benzyloxycarbonyl-L-leucyl-L-leucyl-L-leucinal +mGluRs,FPLX,000193,GRM +MIF,UP,P14174,MIF_HUMAN +mini-chromosome maintenance complex,FPLX,000284,MCM +minichromosome maintenance complex,FPLX,000284,MCM +minichromosome maintenance protein complex,FPLX,000284,MCM +miR-101,MESH,C534072,"MIRN101 microRNA, human" +miR-101,MIRBASE,MI0000103,hsa-mir-101-1 +miR-101,HGNC,31488,MIR101-1 +miR-145,MIRBASE,MI0000461,hsa-mir-145 +miR-145,HGNC,31532,MIR145 +miR-155,MIRBASE,MI0000681,hsa-mir-155 +miR-155,HGNC,31542,MIR155 +miR-21,MIRBASE,MI0000077,hsa-mir-21 +miR-21,HGNC,31586,MIR21 +miR-7,MIRBASE,MI0000263,hsa-mir-7-1 +miR-7,HGNC,31638,MIR7-1 +MITF,UP,O75030,MITF_HUMAN +mammalian mitochondrial ribosome,FPLX,000288,Mitochondrial_Ribosome +Mitochondrial ribosome,FPLX,000288,Mitochondrial_Ribosome +Mitochondrial Ribosome,FPLX,000288,Mitochondrial_Ribosome +mitochondrial ribosomes,FPLX,000288,Mitochondrial_Ribosome +Mitochondrial ribosomes,FPLX,000288,Mitochondrial_Ribosome +Mitochondrial Ribosomes,FPLX,000288,Mitochondrial_Ribosome +mitoribosome,FPLX,000288,Mitochondrial_Ribosome +Mitoribosome,FPLX,000288,Mitochondrial_Ribosome +55S mammalian mitochondrial ribosome,FPLX,000288,Mitochondrial_Ribosome +55S mitoribosome,FPLX,000288,Mitochondrial_Ribosome +55s mitoribosome,FPLX,000288,Mitochondrial_Ribosome +55S Mitoribosome,FPLX,000288,Mitochondrial_Ribosome +55s Mitoribosome,FPLX,000288,Mitochondrial_Ribosome +small mitoribosomal subunit,FPLX,000289,MRPS +Small Mitoribosomal Subunit,FPLX,000289,MRPS +small subunit of the mammalian mitochondrial ribosome,FPLX,000289,MRPS +mitochondrial ribosomal small subunit,FPLX,000289,MRPS +large mitoribosomal subunit,FPLX,000290,MRPL +Large Mitoribosomal Subunit,FPLX,000290,MRPL +large subunit of the mammalian mitochondrial ribosome,FPLX,000290,MRPL +MGAT,FPLX,000287,MGAT +mitochondrial ribosomal large subunit,FPLX,000290,MRPL +mitochondrial membrane potential,MESH,D053078,"Membrane Potential, Mitochondrial" +mitogen activated protein kinase,FPLX,000283,MAPK +mitogen activated protein kinases,FPLX,000283,MAPK +mitogen-activated protein kinase kinase,FPLX,000281,MAP2K +mitogen-activated protein kinase,FPLX,000283,MAPK +mitogen-activated protein kinases,FPLX,000283,MAPK +Miz1,UP,Q13105,ZBT17_HUMAN +MKK4,UP,P45985,MP2K4_HUMAN +MKP-1,UP,P28562,DUS1_HUMAN +MKP3,UP,Q16828,DUS6_HUMAN +MLC,FPLX,000296,MYL +MM,MESH,D009101,Multiple Myeloma +MMC,PUBCHEM,5746, +MMC,CHEBI,CHEBI:27504,mitomycin C +MMP,FPLX,000291,MMP +MMP-2,UP,P08253,MMP2_HUMAN +MMP-9,UP,P14780,MMP9_HUMAN +MMP9,UP,P14780,MMP9_HUMAN +MMPs,FPLX,000291,MMP +Mn,CHEBI,CHEBI:29035,manganese(2+) +Mn,PUBCHEM,27854, +MST1,UP,Q13043,STK4_HUMAN +MST2,UP,Q13188,STK3_HUMAN +MT,FPLX,000292,Metallothionein +mTOR inhibitor,CHEBI,CHEBI:68481,mTOR inhibitor +mTOR inhibitors,CHEBI,CHEBI:68481,mTOR inhibitor +mTOR,UP,P42345,MTOR_HUMAN +mTORC1,FPLX,000293,mTORC1 +mTORC2,FPLX,000294,mTORC2 +MTX,UP,Q13505,MTX1_HUMAN +Mu-A,PUBCHEM,375150, +MUC1,UP,P15941,MUC1_HUMAN +mutp53,UP,P04637,P53_HUMAN +MYC,UP,P01106,MYC_HUMAN +Myc,UP,P01106,MYC_HUMAN +MYCN,UP,P04198,MYCN_HUMAN +myosin alkali light chain proteins,FPLX,000297,MYL_alkali +myosin alkali light chain,FPLX,000297,MYL_alkali +myosin heavy chain genes,FPLX,000295,MYH +myosin heavy chain isoforms,FPLX,000295,MYH +myosin heavy chain protein,FPLX,000295,MYH +Myosin heavy chain,FPLX,000295,MYH +myosin heavy chain,FPLX,000295,MYH +Myosin heavy chains,FPLX,000295,MYH +myosin heavy chains,FPLX,000295,MYH +myosin light chain protein,FPLX,000296,MYL +myosin light chain,FPLX,000296,MYL +myosin light chains,FPLX,000296,MYL +MYPT1,UP,O14974,MYPT1_HUMAN +MYST family,FPLX,000300,MYST +MYST histone acetylase,FPLX,000300,MYST +MYST proteins,FPLX,000300,MYST +N-cadherin,UP,P19022,CADH2_HUMAN +N-myc downstream regulated gene family,FPLX,000307,NDRG +N-Myc,UP,P04198,MYCN_HUMAN +N-Ras,UP,P01111,RASN_HUMAN +Na+/K+-exchanging ATPase,FPLX,000303,Na_K_ATPase +Na+/K+ATPase,FPLX,000303,Na_K_ATPase +Na/K ATPase alpha,FPLX,000057,ATP1A +Na/K ATPase α,FPLX,000057,ATP1A +Na/K-ATPase,FPLX,000303,Na_K_ATPase +NAC,PUBCHEM,443227, +NAC,CHEBI,CHEBI:7421,NAC +nAChR,FPLX,000103,CHRN +NAD(P)H oxidase,FPLX,000302,NADPH_oxidase +NAD(P)H-oxidase,FPLX,000302,NADPH_oxidase +NADH dehydrogenase (ubiquinone),FPLX,000301,NADH_dehydrogenase +NADH dehydrogenase,FPLX,000301,NADH_dehydrogenase +NADPH oxidase,FPLX,000302,NADPH_oxidase +NADPH,PUBCHEM,5884, +NADPH,CHEBI,CHEBI:16474,NADPH +NADPH,HMDB,HMDB00221, +naked cuticle,FPLX,000315,NKD +NAP,UP,P80723,BASP1_HUMAN +Natriuretic Peptide,FPLX,000304,Natriuretic_peptide +Natriuretic peptide,FPLX,000304,Natriuretic_peptide +natriuretic peptide,FPLX,000304,Natriuretic_peptide +Natriuretic Peptides,FPLX,000304,Natriuretic_peptide +Natriuretic peptides,FPLX,000304,Natriuretic_peptide +natriuretic peptides,FPLX,000304,Natriuretic_peptide +NDR family,FPLX,000307,NDRG +NDR-family,FPLX,000307,NDRG +NDRG2,UP,Q9UN36,NDRG2_HUMAN +necroptosis,GO,GO:0070266,necroptotic process +necrosis,GO,GO:0070265,necrotic cell death +necrosis,MESH,D009336,Necrosis +Nef,UP,P03406,NEF_HV1BR +NEMO,UP,Q9Y6K9,NEMO_HUMAN +neovascularization,GO,GO:0001525,angiogenesis +neovascularization,MESH,D018919,"Neovascularization, Physiologic" +Net1,UP,Q7Z628,ARHG8_HUMAN +neuregulin family,FPLX,000318,NRG +Neuregulin,FPLX,000318,NRG +neuregulin,FPLX,000318,NRG +Neuregulins,FPLX,000318,NRG +neuregulins,FPLX,000318,NRG +Neurexins,FPLX,000308,Neurexins +NF-E2,FPLX,000310,NFE +NF-E2-related factor,FPLX,000310,NFE +NF-kappaB Class 1,FPLX,000312,NFkappaB_1 +NF-kappaB class 1,FPLX,000312,NFkappaB_1 +NF-kappaB Class 2,FPLX,000313,NFkappaB_2 +NF-kappaB class 2,FPLX,000313,NFkappaB_2 +NF-kappaB Class I,FPLX,000312,NFkappaB_1 +NF-kappaB class I,FPLX,000312,NFkappaB_1 +NF-kappaB Class II,FPLX,000313,NFkappaB_2 +NF-kappaB class II,FPLX,000313,NFkappaB_2 +NF-kappaB complexes,FPLX,000311,NFkappaB +NF-kappaB dimers,FPLX,000311,NFkappaB +NF-kappaB Factors,FPLX,000311,NFkappaB +NF-kappaB factors,FPLX,000311,NFkappaB +NF-kappaB genes,FPLX,000311,NFkappaB +NF-kappaB p50,HGNC,7794,NFKB1 +NF-kappaB p65,HGNC,9955,RELA +NF-kappaB p65,UP,Q04206,TF65_HUMAN +NF-kappaB subunits,FPLX,000311,NFkappaB +NF-kappaB TFs,FPLX,000311,NFkappaB +NF-kappaB,FPLX,000311,NFkappaB +NF-kappaB1,HGNC,7794,NFKB1 +NF-kappaB2,HGNC,7795,NFKB2 +NF-kappabeta,FPLX,000311,NFkappaB +NF-kappaBp50,HGNC,7794,NFKB1 +NF-kappaBp65,HGNC,9955,RELA +NF-kappaBs,FPLX,000311,NFkappaB +NF-kB,FPLX,000311,NFkappaB +NF-Y,FPLX,000314,NFY +NF-κB Class 1,FPLX,000312,NFkappaB_1 +NF-κB class 1,FPLX,000312,NFkappaB_1 +NF-κB Class 2,FPLX,000313,NFkappaB_2 +NF-κB class 2,FPLX,000313,NFkappaB_2 +NF-κB Class I,FPLX,000312,NFkappaB_1 +NF-κB class I,FPLX,000312,NFkappaB_1 +NF-κB Class II,FPLX,000313,NFkappaB_2 +NF-κB class II,FPLX,000313,NFkappaB_2 +NF-κB complexes,FPLX,000311,NFkappaB +NF-κB dimers,FPLX,000311,NFkappaB +NF-κB Factors,FPLX,000311,NFkappaB +NF-κB factors,FPLX,000311,NFkappaB +NF-κB genes,FPLX,000311,NFkappaB +NF-κB p50,HGNC,7794,NFKB1 +NF-κB p65,HGNC,9955,RELA +NF-κB p65,UP,Q04206,TF65_HUMAN +NF-κB subunits,FPLX,000311,NFkappaB +NF-κB TFs,FPLX,000311,NFkappaB +NF-κB,FPLX,000311,NFkappaB +NF-κB1,HGNC,7794,NFKB1 +NF-κB2,HGNC,7795,NFKB2 +NF-κBp50,HGNC,7794,NFKB1 +NF-κBp65,HGNC,9955,RELA +NF-κBs,FPLX,000311,NFkappaB +NF-κβ,FPLX,000311,NFkappaB +NFAT,FPLX,000309,NFAT +NFkappaB complexes,FPLX,000311,NFkappaB +NFkappaB p50,HGNC,7794,NFKB1 +NFkappaB p65,HGNC,9955,RELA +NFkappaB,FPLX,000311,NFkappaB +NFkappaBp65,HGNC,9955,RELA +NFY,FPLX,000314,NFY +NFκB complexes,FPLX,000311,NFkappaB +NFκB p50,HGNC,7794,NFKB1 +NFκB p65,HGNC,9955,RELA +NFκB,FPLX,000311,NFkappaB +NFκBp65,HGNC,9955,RELA +NGF,UP,P01138,NGF_HUMAN +nicotine class acetylcholine receptors,FPLX,000103,CHRN +nicotinic acetylcholine receptor,FPLX,000103,CHRN +nitric oxide,PUBCHEM,145068, +nitric oxide,CHEBI,CHEBI:16480,nitric oxide +nmMLCK,UP,Q15746-1,MYLK_HUMAN +nmMLCK1,UP,Q15746-1,MYLK_HUMAN +NO,HMDB,HMDB03378, +NO,CHEBI,CHEBI:16480,nitric oxide +NO,PUBCHEM,145068, +non-ELR-CXC chemokines,FPLX,000128,CXCL_ELR_negative +NOS,FPLX,000316,NOS +Notch,FPLX,000317,Notch +Notch1,UP,P46531,NOTC1_HUMAN +NOX1,UP,Q9Y5S8,NOX1_HUMAN +NOX2,UP,P04839,CY24B_HUMAN +NOX3,UP,Q9HBY0,NOX3_HUMAN +NOX4,UP,Q9NPH5,NOX4_HUMAN +Noxa,UP,Q13794,APR_HUMAN +NPM,UP,P06748,NPM_HUMAN +NRAS,UP,P01111,RASN_HUMAN +NRF2,UP,Q16236,NF2L2_HUMAN +Nrf2,UP,Q16236,NF2L2_HUMAN +NRG1,UP,Q02297,NRG1_HUMAN +NRG1-NRG2,FPLX,000319,NRG_1_2 +NRG1/2,FPLX,000319,NRG_1_2 +NRG3-NRG4,FPLX,000320,NRG_3_4 +NRG3/4,FPLX,000320,NRG_3_4 +NRGs,FPLX,000318,NRG +NRXN,FPLX,000308,Neurexins +NTF3,UP,P20783,NTF3_HUMAN +NTRK,FPLX,000321,NTRK +NTRKs,FPLX,000321,NTRK +Nuclear factor erythroid 2-related factor,FPLX,000310,NFE +nuclear factor Y,FPLX,000314,NFY +nuclear factor-Y,FPLX,000314,NFY +Nuclear Receptor Co-Repressor,FPLX,000306,NCOR +nuclear receptor co-repressor,FPLX,000306,NCOR +Nuclear receptor corepressor,FPLX,000306,NCOR +nuclear receptor corepressor,FPLX,000306,NCOR +Nutlin-3,PUBCHEM,16755649, +Nutlin-3,CHEBI,CHEBI:46742,Nutlin-3 +NVP-BEZ235,PUBCHEM,11977753, +NVP-BEZ235,LINCS,10232-101, +NVP-BEZ235,CHEBI,CHEBI:71952,dactolisib +NVP-LDE-225,PUBCHEM,24775005, +NVP-LDE-225,CHEBI,CHEBI:90863,sonidegib +OA,CHEBI,CHEBI:37659,oleanolic acid +OA,PUBCHEM,10494, +OA,CHEBI,CHEBI:44658,okadaic acid +OA,PUBCHEM,446512, +ofalpha(2)-adrenoceptor,FPLX,000020,ADRA2 +ofα(2)-adrenoceptor,FPLX,000020,ADRA2 +OPG,UP,O00300,TR11B_HUMAN +OPN,UP,P10451,OSTP_HUMAN +ov-serpins,FPLX,000431,SERPINB +oxaliplatin,CHEBI,CHEBI:31941,oxaliplatin +oxaliplatin,PUBCHEM,6857599, +oxygen,HMDB,HMDB01377, +oxygen,CHEBI,CHEBI:15379,dioxygen +oxygen,PUBCHEM,977, +P-REX1,UP,Q8TCU6,PREX1_HUMAN +p100,HGNC,7795,NFKB2 +p105,HGNC,7794,NFKB1 +p110,FPLX,000359,PI3K_p110 +p110alpha,UP,P42336,PK3CA_HUMAN +p110beta,UP,P42338,PK3CB_HUMAN +p110α,UP,P42336,PK3CA_HUMAN +p110β,UP,P42338,PK3CB_HUMAN +p120,UP,O60716,CTND1_HUMAN +p130,UP,P56945,BCAR1_HUMAN +p16,UP,P42771,CDN2A_HUMAN +p160/SRC,FPLX,000305,NCOA +p21 Cip1,UP,P38936,CDN1A_HUMAN +p21 WAF1,UP,P38936,CDN1A_HUMAN +p21,UP,P38936,CDN1A_HUMAN +p22 phox,UP,P13498,CY24A_HUMAN +p27 Kip1,UP,P46527,CDN1B_HUMAN +p27,UP,P46527,CDN1B_HUMAN +P2X purinoreceptor,FPLX,000324,P2RX +P2X purinoreceptors,FPLX,000324,P2RX +P2X receptor,FPLX,000324,P2RX +P2X receptors,FPLX,000324,P2RX +P2X,FPLX,000324,P2RX +P2Y receptor,FPLX,000325,P2RY +p300,UP,Q09472,EP300_HUMAN +P38 MAPK,FPLX,000326,p38 +p38 MAPK,FPLX,000326,p38 +p38 MAPKs,FPLX,000326,p38 +p38,FPLX,000326,p38 +p38-MAPK,FPLX,000326,p38 +p38MAPK,FPLX,000326,p38 +p40 phox,UP,Q15080,NCF4_HUMAN +p42,UP,P28482,MK01_HUMAN +p42,UP,Q9UQ80,PA2G4_HUMAN +p47 phox,UP,P14598,NCF1_HUMAN +p50,UP,P19838,NFKB1_HUMAN +p52,HGNC,7795,NFKB2 +P53 family,FPLX,000327,p53_family +p53 Family,FPLX,000327,p53_family +p53 family,FPLX,000327,p53_family +P53,UP,P04637,P53_HUMAN +p53,UP,P04637,P53_HUMAN +p53/p63/p73 family,FPLX,000327,p53_family +p62,UP,Q13501,SQSTM_HUMAN +p63,UP,Q9H3D4,P63_HUMAN +p65,UP,Q04206,TF65_HUMAN +p66Shc,UP,P29353-1,SHC1_HUMAN +p67 phox,UP,P19878,NCF2_HUMAN +p70 S6 kinase,FPLX,000328,P70S6K +p70,UP,P23443,KS6B1_HUMAN +P70RSK,FPLX,000328,P70S6K +p70RSK,FPLX,000328,P70S6K +p70S6 kinase,UP,P23443,KS6B1_HUMAN +P70S6K,FPLX,000328,P70S6K +p70S6K,UP,P23443,KS6B1_HUMAN +p73,UP,O15350,P73_HUMAN +p85,FPLX,000360,PI3K_p85 +p85alpha,UP,P27986,P85A_HUMAN +p85α,UP,P27986,P85A_HUMAN +p90RSK,FPLX,000329,P90RSK +PA,CHEBI,CHEBI:16337,phosphatidic acid +PA,PUBCHEM,8144759, +paeoniflorin,CHEBI,CHEBI:7889,paeoniflorin +paeoniflorin,PUBCHEM,442534, +PAI-1,UP,P05121,PAI1_HUMAN +PAK,FPLX,000330,PAK +Pak,FPLX,000330,PAK +PAK1,UP,Q13153,PAK1_HUMAN +Pak1,UP,Q13153,PAK1_HUMAN +Pak2,UP,Q13177,PAK2_HUMAN +PAK4,UP,O96013,PAK4_HUMAN +palmitate,PUBCHEM,985, +palmitate,CHEBI,CHEBI:15756,hexadecanoic acid +palmitate,HMDB,HMDB00220, +PAR3,UP,Q8TEW0,PARD3_HUMAN +Parkin,UP,O60260,PRKN_HUMAN +PARP genes,FPLX,000331,PARP +PARP,UP,P09874,PARP1_HUMAN +Parp,UP,P09874,PARP1_HUMAN +PARP-1,UP,P09874,PARP1_HUMAN +PARPs,FPLX,000331,PARP +Parvin,FPLX,000332,PARV +parvin,FPLX,000332,PARV +Parvins,FPLX,000332,PARV +parvins,FPLX,000332,PARV +PATCHED,FPLX,000333,Patched +Patched,FPLX,000333,Patched +paxillin,UP,P49023,PAXI_HUMAN +PBX,FPLX,000334,PBX +Pbx,FPLX,000334,PBX +pbx,FPLX,000334,PBX +PBXs,FPLX,000334,PBX +Pca,MESH,D011471,Prostatic Neoplasms +PCNA,UP,P12004,PCNA_HUMAN +PD,MESH,D010300,Parkinson Disease +PD98509,CHEBI,CHEBI:79091,EC 2.7.11.24 (mitogen-activated protein kinase) inhibitor +PDE 2,HGNC,8777,PDE2A +PDE 3,FPLX,000337,PDE3 +PDE,FPLX,000335,PDE +PDE1 family,FPLX,000336,PDE1 +PDE1,FPLX,000336,PDE1 +PDE3 family,FPLX,000337,PDE3 +PDE3,FPLX,000337,PDE3 +PDE4 family,FPLX,000338,PDE4 +PDE4 isoforms,FPLX,000338,PDE4 +PDE4,FPLX,000338,PDE4 +PDE5,HGNC,8784,PDE5A +PDE6 family,FPLX,000339,PDE6 +PDE6,FPLX,000339,PDE6 +PDE7,FPLX,000340,PDE7 +PDE8,FPLX,000341,PDE8 +PDEs,FPLX,000335,PDE +PDGF CC,FPLX,000350,PDGF_CC +PDGF DD,FPLX,000351,PDGF_DD +PDGF,FPLX,000342,PDGF +PDGF-AA,FPLX,000347,PDGF_AA +PDGF-aa,FPLX,000347,PDGF_AA +PDGF-AB,FPLX,000348,PDGF_AB +PDGF-ab,FPLX,000348,PDGF_AB +PDGF-BB,FPLX,000349,PDGF_BB +PDGF-bb,FPLX,000349,PDGF_BB +PDGF-CC,FPLX,000350,PDGF_CC +PDGF-cc,FPLX,000350,PDGF_CC +PDGF-DD,FPLX,000351,PDGF_DD +PDGF-dd,FPLX,000351,PDGF_DD +PDGFAA,FPLX,000347,PDGF_AA +PDGFAB,FPLX,000348,PDGF_AB +PDGFBB,FPLX,000349,PDGF_BB +PDGFR,FPLX,000343,PDGFR +PDGFR-AA,FPLX,000344,PDGFR_AA +PDGFR-AB,FPLX,000345,PDGFR_AB +PDGFR-alphaalpha,FPLX,000344,PDGFR_AA +PDGFR-alphabeta,FPLX,000345,PDGFR_AB +PDGFR-BB,FPLX,000346,PDGFR_BB +PDGFR-betabeta,FPLX,000346,PDGFR_BB +PDGFR-αα,FPLX,000344,PDGFR_AA +PDGFR-αβ,FPLX,000345,PDGFR_AB +PDGFR-ββ,FPLX,000346,PDGFR_BB +PDGFRalpha,UP,P16234,PGFRA_HUMAN +PDGFRalphaalpha,FPLX,000344,PDGFR_AA +PDGFRalphabeta,FPLX,000345,PDGFR_AB +PDGFRbeta,UP,P09619,PGFRB_HUMAN +PDGFRbetabeta,FPLX,000346,PDGFR_BB +PDGFRβ,UP,P09619,PGFRB_HUMAN +PDGFRα,UP,P16234,PGFRA_HUMAN +PDGFRαα,FPLX,000344,PDGFR_AA +PDGFRαβ,FPLX,000345,PDGFR_AB +PDGFRββ,FPLX,000346,PDGFR_BB +PDH,FPLX,000352,PDH +PDK,FPLX,000353,PDK +PDK,UP,O15530,PDPK1_HUMAN +PDK1,UP,O15530,PDPK1_HUMAN +PDKs,FPLX,000353,PDK +PDPK1,UP,O15530,PDPK1_HUMAN +PDT,MESH,D010778,Photochemotherapy +PEA-15,UP,Q15121,PEA15_HUMAN +PERK,UP,Q9NZJ5,E2AK3_HUMAN +Peroxiredoxin,FPLX,000388,PRDX +peroxiredoxin,FPLX,000388,PRDX +Peroxiredoxins,FPLX,000388,PRDX +peroxiredoxins,FPLX,000388,PRDX +Pertussis toxin,FPLX,000354,Pertussis_toxin +pertussis toxin,FPLX,000354,Pertussis_toxin +PF-3758309,PUBCHEM,25227462, +PF-3758309,CHEBI,CHEBI:93751,"N-[(1S)-2-(dimethylamino)-1-phenylethyl]-6,6-dimethyl-3-[(2-methyl-4-thieno[3,2-d]pyrimidinyl)amino]-1,4-dihydropyrrolo[3,4-c]pyrazole-5-carboxamide" +PGC-1alpha,UP,Q9UBK2,PRGC1_HUMAN +PGC-1α,UP,Q9UBK2,PRGC1_HUMAN +PGE 2,CHEBI,CHEBI:73965,prostaglandin E2-UM +PGE 2,PUBCHEM,161468, +PGE2,UP,P35408,PE2R4_HUMAN +phenformin,PUBCHEM,8249, +phenformin,CHEBI,CHEBI:8064,phenformin +PhK,FPLX,000356,PhK +phosphatase,FPLX,000357,Phosphatase +phosphatidylinositol 3-kinase,FPLX,000358,PI3K +phosphatidylinositol,CHEBI,CHEBI:28874,phosphatidylinositol +phosphatidylinositol,MESH,D010716,Phosphatidylinositols +phospho-ERK1/2,FPLX,000161,ERK +Phosphodiesterase 1,FPLX,000336,PDE1 +phosphodiesterase 1,FPLX,000336,PDE1 +Phosphodiesterase 2,HGNC,8777,PDE2A +phosphodiesterase 2,HGNC,8777,PDE2A +Phosphodiesterase 3,FPLX,000337,PDE3 +phosphodiesterase 3,FPLX,000337,PDE3 +Phosphodiesterase 4,FPLX,000338,PDE4 +phosphodiesterase 4,FPLX,000338,PDE4 +Phosphodiesterase 5,HGNC,8784,PDE5A +phosphodiesterase 5,HGNC,8784,PDE5A +Phosphodiesterase 6,FPLX,000339,PDE6 +phosphodiesterase 6,FPLX,000339,PDE6 +Phosphodiesterase 7,FPLX,000340,PDE7 +phosphodiesterase 7,FPLX,000340,PDE7 +Phosphodiesterase 8,FPLX,000341,PDE8 +phosphodiesterase 8,FPLX,000341,PDE8 +Phosphodiesterase,FPLX,000335,PDE +phosphodiesterase,FPLX,000335,PDE +Phosphodiesterase-1,FPLX,000336,PDE1 +phosphodiesterase-1,FPLX,000336,PDE1 +Phosphodiesterase-2,HGNC,8777,PDE2A +phosphodiesterase-2,HGNC,8777,PDE2A +Phosphodiesterase-3,FPLX,000337,PDE3 +phosphodiesterase-3,FPLX,000337,PDE3 +Phosphodiesterase-4,FPLX,000338,PDE4 +phosphodiesterase-4,FPLX,000338,PDE4 +Phosphodiesterase-5,HGNC,8784,PDE5A +phosphodiesterase-5,HGNC,8784,PDE5A +Phosphodiesterase-6,FPLX,000339,PDE6 +phosphodiesterase-6,FPLX,000339,PDE6 +Phosphodiesterase-7,FPLX,000340,PDE7 +phosphodiesterase-7,FPLX,000340,PDE7 +Phosphodiesterase-8,FPLX,000341,PDE8 +phosphodiesterase-8,FPLX,000341,PDE8 +Phosphodiesterases,FPLX,000335,PDE +phosphodiesterases,FPLX,000335,PDE +Phospholipase A2 Group IV,FPLX,000368,PLA2G4 +phospholipase A2 group-II,FPLX,000367,PLA2G2 +phospholipase A2 group-IV,FPLX,000368,PLA2G4 +phospholipase A2,FPLX,000366,PLA2 +Phospholipase C,FPLX,000369,PLC +phospholipase C,FPLX,000369,PLC +Phospholipase C-beta,FPLX,000370,PLCB +phospholipase C-beta,FPLX,000370,PLCB +Phospholipase C-delta,FPLX,000371,PLCD +phospholipase C-delta,FPLX,000371,PLCD +Phospholipase C-β,FPLX,000370,PLCB +phospholipase C-β,FPLX,000370,PLCB +Phospholipase C-δ,FPLX,000371,PLCD +phospholipase C-δ,FPLX,000371,PLCD +Phospholipase Cbeta,FPLX,000370,PLCB +phospholipase Cbeta,FPLX,000370,PLCB +Phospholipase Cdelta,FPLX,000371,PLCD +phospholipase Cdelta,FPLX,000371,PLCD +Phospholipase Cβ,FPLX,000370,PLCB +phospholipase Cβ,FPLX,000370,PLCB +Phospholipase Cδ,FPLX,000371,PLCD +phospholipase Cδ,FPLX,000371,PLCD +Phospholipase D,FPLX,000373,PLD +phospholipase D,FPLX,000373,PLD +Phospholipase-C,FPLX,000369,PLC +phospholipase-C,FPLX,000369,PLC +Phosphorylase kinase,FPLX,000356,PhK +phosphorylase kinase,FPLX,000356,PhK +PI 3-kinase,FPLX,000358,PI3K +PI 3-kinases,FPLX,000358,PI3K +PI,CHEBI,CHEBI:28874,phosphatidylinositol +PI,MESH,D010716,Phosphatidylinositols +PI3-kinase,FPLX,000358,PI3K +PI3K inhibitor,CHEBI,CHEBI:84801,EC 2.7.1.127 (inositol-trisphosphate 3-kinase) inhibitor +PI3K p110 subunit,FPLX,000359,PI3K_p110 +PI3K,FPLX,000358,PI3K +PI3Kinase,FPLX,000358,PI3K +PIK3C,FPLX,000359,PI3K_p110 +PIK3CA,UP,P42336,PK3CA_HUMAN +PIK3R,FPLX,000361,PIK3R_I +PIM,FPLX,000362,PIM +Pin1,UP,Q13526,PIN1_HUMAN +PIP,CHEBI,CHEBI:28765,phosphatidylinositol phosphate +PIP3,MESH,C060974,"phosphatidylinositol 3,4,5-triphosphate" +PIP3,CHEBI,CHEBI:60169,phosphatidylinositol trisphosphate +PK-A,FPLX,000363,PKA +PKA catalytic subunit,FPLX,000389,PRKAC +PKA catalytic subunits,FPLX,000389,PRKAC +PKA regulatory subunit,FPLX,000390,PRKAR +PKA regulatory subunits,FPLX,000390,PRKAR +PKA,FPLX,000363,PKA +PKB,FPLX,000023,AKT +PKB-Akt,FPLX,000023,AKT +PKB/Akt,FPLX,000023,AKT +PKC,FPLX,000364,PKC +PKCalpha,UP,P17252,KPCA_HUMAN +PKCdelta,UP,Q05655,KPCD_HUMAN +PKCepsilon,UP,Q02156,KPCE_HUMAN +PKCα,UP,P17252,KPCA_HUMAN +PKCε,UP,Q02156,KPCE_HUMAN +PKCδ,UP,Q05655,KPCD_HUMAN +PKG,FPLX,000391,PRKG +PKI,FPLX,000365,PKI +PKM2,UP,P14618,KPYM_HUMAN +PKR,UP,P19525,E2AK2_HUMAN +PLA2G2,FPLX,000367,PLA2G2 +PLA2g2,FPLX,000367,PLA2G2 +PLA2G4,FPLX,000368,PLA2G4 +PLB,UP,P26678,PPLA_HUMAN +PLC,FPLX,000369,PLC +PLC-gamma,FPLX,000372,PLCG +PLC-gamma1,UP,P19174,PLCG1_HUMAN +PLC-γ,FPLX,000372,PLCG +PLC-γ1,UP,P19174,PLCG1_HUMAN +PLCgamma1,UP,P19174,PLCG1_HUMAN +PLCγ1,UP,P19174,PLCG1_HUMAN +PLK1,UP,P53350,PLK1_HUMAN +Plk1,UP,P53350,PLK1_HUMAN +PLX,PUBCHEM,42611257, +PLX,CHEBI,CHEBI:63637,vemurafenib +PLX4032,PUBCHEM,42611257, +PLX4032,CHEBI,CHEBI:63637,vemurafenib +PML,UP,P29590,PML_HUMAN +Pol delta,FPLX,000141,DNA_polymerase_delta +pol delta,FPLX,000141,DNA_polymerase_delta +Pol I,FPLX,000416,RNApo_I +Pol δ,FPLX,000141,DNA_polymerase_delta +pol δ,FPLX,000141,DNA_polymerase_delta +Poly(ADP-ribose) polymerase,FPLX,000331,PARP +Poly(ADP-ribose) polymerases,FPLX,000331,PARP +polycomb Repressive Complex (PRC) 1,FPLX,000386,PRC1_complex +Polycomb Repressive Complex 1,FPLX,000386,PRC1_complex +Polycomb repressive complex 1,FPLX,000386,PRC1_complex +polycomb repressive complex 1,FPLX,000386,PRC1_complex +Polycomb Repressive Complex 2,FPLX,000387,PRC2_complex +Polycomb repressive complex 2,FPLX,000387,PRC2_complex +polycomb repressive complex 2,FPLX,000387,PRC2_complex +Polycomb repressive complex PRC1,FPLX,000386,PRC1_complex +Polycomb repressive complex PRC2,FPLX,000387,PRC2_complex +Polycomb Repressive Complexes 1,FPLX,000386,PRC1_complex +Polycomb Repressive Complexes 2,FPLX,000387,PRC2_complex +Polycomb-repressive complex 1,FPLX,000386,PRC1_complex +Polycomb-repressive complex 2,FPLX,000387,PRC2_complex +PP1 regulator,FPLX,000376,PPP1 +PP1,FPLX,000376,PPP1 +PP1C,FPLX,000377,PPP1C +PP1c,FPLX,000377,PPP1C +PP1R,FPLX,000378,PPP1R +PP1r,FPLX,000378,PPP1R +PP2 phosphatases,FPLX,000379,PPP2 +PP2,CHEBI,CHEBI:78331,PP2 +PP2,PUBCHEM,4878, +PP2,FPLX,000379,PPP2 +PP242,PUBCHEM,135565635, +PP242,CHEBI,CHEBI:90679,torkinib +PP2A catalytic C subunit,FPLX,000380,PPP2C +PP2A regulatory subunit A,FPLX,000381,PPP2R_A +PP2A regulatory subunit B,FPLX,000382,PPP2R_B +PP2A,FPLX,000379,PPP2 +PP2A-C,FPLX,000380,PPP2C +PP2Ac,FPLX,000380,PPP2C +PP2B catalytic subunit,FPLX,000384,PPP3C +PP2B,FPLX,000383,PPP3 +PPAR,FPLX,000375,PPAR +PPAR-gamma,UP,P37231,PPARG_HUMAN +PPAR-γ,UP,P37231,PPARG_HUMAN +PPARgamma,UP,P37231,PPARG_HUMAN +PPARγ,UP,P37231,PPARG_HUMAN +PPP1,FPLX,000376,PPP1 +PPP1C,FPLX,000377,PPP1C +PR,UP,P06401,PRGR_HUMAN +PRAS40,UP,Q96B36,AKTS1_HUMAN +pRB,UP,P06400,RB_HUMAN +pRb,UP,P06400,RB_HUMAN +PRC1,FPLX,000386,PRC1_complex +PRC1,UP,O43663,PRC1_HUMAN +PRC2,FPLX,000387,PRC2_complex +PRKAA,FPLX,000044,AMPK_alpha +PRKAB,FPLX,000045,AMPK_beta +PRKAG,FPLX,000046,AMPK_gamma +PRL-3,UP,O75365,TP4A3_HUMAN +Profilin,FPLX,000355,PFN +profilin,FPLX,000355,PFN +Profilins,FPLX,000355,PFN +profilins,FPLX,000355,PFN +progesterone,CHEBI,CHEBI:17026,progesterone +progesterone,PUBCHEM,5994, +Proliferation,GO,GO:0008283,cell population proliferation +Proliferation,MESH,D049109,Cell Proliferation +proliferation,GO,GO:0008283,cell population proliferation +proliferation,MESH,D049109,Cell Proliferation +Propionyl-CoA carboxylase,FPLX,000392,Propionyl_CoA_carboxylase +propionyl-CoA carboxylase,FPLX,000392,Propionyl_CoA_carboxylase +prostaglandin E receptor,FPLX,000395,PTGER +protease,FPLX,000393,Protease +proteasome endopeptidase,FPLX,000394,Proteasome +proteasome,FPLX,000394,Proteasome +protein farnesyltransferase,FPLX,000172,FNT +Protein kinase A catalytic subunit,FPLX,000389,PRKAC +protein kinase A catalytic subunit,FPLX,000389,PRKAC +Protein kinase A catalytic subunits,FPLX,000389,PRKAC +protein kinase A catalytic subunits,FPLX,000389,PRKAC +Protein kinase A regulatory subunit,FPLX,000390,PRKAR +protein kinase A regulatory subunit,FPLX,000390,PRKAR +Protein kinase A regulatory subunits,FPLX,000390,PRKAR +protein kinase A regulatory subunits,FPLX,000390,PRKAR +protein kinase A,FPLX,000363,PKA +protein kinase C,FPLX,000364,PKC +protein kinase G,FPLX,000391,PRKG +protein phosphatase 2,FPLX,000379,PPP2 +protein phosphatase 2B,FPLX,000383,PPP3 +proteolysis,GO,GO:0006508,proteolysis +proteolysis,MESH,D059748,Proteolysis +PTC,UP,P18502,PTC_DROME +Ptc,UP,P18502,PTC_DROME +ptc,UP,P18502,PTC_DROME +PTEN,UP,P60484,PTEN_HUMAN +Pten,UP,P60484,PTEN_HUMAN +PTP1B,UP,P18031,PTN1_HUMAN +PTX,FPLX,000354,Pertussis_toxin +PTX3,HGNC,9692,PTX3 +PTX3,UP,P26022,PTX3_HUMAN +PUMA,UP,Q96PG8,BBC3B_HUMAN +PYG,FPLX,000396,PYG +Pyk2,UP,Q14289,FAK2_HUMAN +pyruvate dehydrogenase (acetyl-transferring),FPLX,000352,PDH +Pyruvate dehydrogenase kinase,FPLX,000353,PDK +pyruvate dehydrogenase kinase,FPLX,000353,PDK +quercetin,CHEBI,CHEBI:16243,quercetin +quercetin,PUBCHEM,5280343, +RA,PUBCHEM,5538, +RA,CHEBI,CHEBI:26536,retinoic acid +RA,HMDB,HMDB06219, +Rab GTPase,FPLX,000397,RAB +Rab GTPases,FPLX,000397,RAB +rab GTPases,FPLX,000397,RAB +rab proteins,FPLX,000397,RAB +RAB,FPLX,000397,RAB +Rab,FPLX,000397,RAB +rab,FPLX,000397,RAB +Rabs,FPLX,000397,RAB +RAC,FPLX,000398,RAC +Rac,UP,P63000,RAC1_HUMAN +RAC1,UP,P63000,RAC1_HUMAN +Rac1,UP,P63000,RAC1_HUMAN +RAD51,UP,Q06609,RAD51_HUMAN +Rad51,UP,Q06609,RAD51_HUMAN +Rad52,UP,P43351,RAD52_HUMAN +RAF inhibitors,CHEBI,CHEBI:75047,B-Raf inhibitor +RAF,FPLX,000399,RAF +Raf,FPLX,000399,RAF +Raf-1,UP,P04049,RAF1_HUMAN +RAGE,UP,Q15109,RAGE_HUMAN +RAL family,FPLX,000400,RAL +Ral family,FPLX,000400,RAL +RAL guanine nucleotide dissociation stimulator like,FPLX,000413,RGL +Ral guanine nucleotide dissociation stimulator like,FPLX,000413,RGL +ral guanine nucleotide dissociation stimulator like,FPLX,000413,RGL +RAL isoforms,FPLX,000400,RAL +Ral isoforms,FPLX,000400,RAL +RAL proteins,FPLX,000400,RAL +Ral proteins,FPLX,000400,RAL +RAL,FPLX,000400,RAL +RAL,HGNC,9839,RALA +RalA,UP,P11233,RALA_HUMAN +RALGDS-like,FPLX,000413,RGL +RANKL,UP,O14788,TNF11_HUMAN +Rap guanine nucleotide exchange factor,FPLX,000402,RAPGEF +Rap guanine nucleotide exchange factors,FPLX,000402,RAPGEF +Rap1,FPLX,000401,RAP1 +Rapamycin,PUBCHEM,5284616, +Rapamycin,CHEBI,CHEBI:9168,sirolimus +rapamycin,PUBCHEM,5284616, +rapamycin,CHEBI,CHEBI:9168,sirolimus +RapGEFs,FPLX,000402,RAPGEF +Raptor,UP,Q8N122,RPTOR_HUMAN +raptor,UP,Q8N122,RPTOR_HUMAN +RAR,FPLX,000403,RAR +RAS association domain family,FPLX,000410,RASSF +Ras association domain family,FPLX,000410,RASSF +Ras GTPase,FPLX,000404,RAS +RAS,FPLX,000404,RAS +Ras,FPLX,000404,RAS +RAS-association domain family,FPLX,000410,RASSF +Ras-association domain family,FPLX,000410,RASSF +RASA,FPLX,000405,RASA +RASAL,FPLX,000406,RASAL +RasGAP,FPLX,000407,RasGAP +RasGAPs,FPLX,000407,RasGAP +RASGRF,FPLX,000408,RASGRF +RASGRP,FPLX,000409,RASGRP +RASSF family,FPLX,000410,RASSF +RASSF1A,UP,Q9NS23,RASF1_HUMAN +RB,UP,P06400,RB_HUMAN +Rb,UP,P06400,RB_HUMAN +RB1,UP,P06400,RB_HUMAN +Rb1,UP,P06400,RB_HUMAN +receptor tyrosine kinase-like orphan receptor,FPLX,000420,ROR +receptor tyrosine kinase-like orphan receptors,FPLX,000420,ROR +REDD1,UP,Q9NX09,DDIT4_HUMAN +regulatory A subunit of PP2A,FPLX,000381,PPP2R_A +regulatory B subunit of PP2A,FPLX,000382,PPP2R_B +regulatory family X,FPLX,000412,RFX +regulatory myosin light chain,FPLX,000298,MYL_regulatory +regulatory subunit of calcineurin,FPLX,000385,PPP3R +RelA,UP,Q04206,TF65_HUMAN +replication factor C,FPLX,000411,RFC +Replication protein A,FPLX,000421,RPA +replication protein A,FPLX,000421,RPA +RES,PUBCHEM,5281611, +Resveratrol,PUBCHEM,445154, +Resveratrol,CHEBI,CHEBI:27881,resveratrol +resveratrol,PUBCHEM,445154, +resveratrol,CHEBI,CHEBI:27881,resveratrol +RET,UP,P07949,RET_HUMAN +retinoblastoma protein,UP,P06400,RB_HUMAN +retinoic acid receptors,FPLX,000403,RAR +retinoid X receptors,FPLX,000424,RXR +retinoid-X receptor,FPLX,000424,RXR +RF-C,FPLX,000411,RFC +RF-X,FPLX,000412,RFX +RFC,FPLX,000411,RFC +RFX family,FPLX,000412,RFX +RFX proteins,FPLX,000412,RFX +RFX,FPLX,000412,RFX +Rheb,UP,Q15382,RHEB_HUMAN +Rho family,FPLX,000414,RHO +RHO,FPLX,000414,RHO +Rho,UP,P61586,RHOA_HUMAN +Rho-GDI,FPLX,000415,RhoGDI +RhoA,UP,P61586,RHOA_HUMAN +RhoB,UP,P62745,RHOB_HUMAN +RhoC,UP,P08134,RHOC_HUMAN +RHOGDI,FPLX,000415,RhoGDI +RhoGDI,FPLX,000415,RhoGDI +rhoGDI,FPLX,000415,RhoGDI +RhoGDIs,FPLX,000415,RhoGDI +ribosomal protein S6,UP,P62753,RS6_HUMAN +ribosomal protein S6,IP,IPR000529, +RICTOR,UP,Q6R327,RICTR_HUMAN +Rictor,UP,Q6R327,RICTR_HUMAN +RIG-I,UP,O95786,DDX58_HUMAN +RIP1,UP,Q13546,RIPK1_HUMAN +RKIP,UP,P30086,PEBP1_HUMAN +RNA polymerase 1,FPLX,000416,RNApo_I +RNA polymerase I,FPLX,000416,RNApo_I +RNA polymerase II,FPLX,000417,RNApo_II +RNAP II,FPLX,000417,RNApo_II +ROCK,FPLX,000419,ROCK +ROCK1,UP,Q13464,ROCK1_HUMAN +ROCK2,UP,O75116,ROCK2_HUMAN +ROR,FPLX,000420,ROR +RORs,FPLX,000420,ROR +ROS,MESH,D017382,Reactive Oxygen Species +ROS,UP,P08922,ROS1_HUMAN +rosiglitazone,CHEBI,CHEBI:50122,rosiglitazone +rosiglitazone,PUBCHEM,77999, +rottlerin,CHEBI,CHEBI:8899,rottlerin +rottlerin,PUBCHEM,5281847, +RPA,FPLX,000421,RPA +rPKA,FPLX,000390,PRKAR +RPS6KA,FPLX,000329,P90RSK +RSK,FPLX,000422,RSK +RSK2,UP,P51812,KS6A3_HUMAN +RTA,UP,O43251,RFOX2_HUMAN +RTKs,FPLX,000423,RTK +RUNX2,UP,Q13950,RUNX2_HUMAN +rutin,CHEBI,CHEBI:28527,rutin +rutin,PUBCHEM,5280805, +RXR,FPLX,000424,RXR +S100,FPLX,000425,S100 +S100A,FPLX,000426,S100A +S100a,FPLX,000426,S100A +S1P receptor,FPLX,000427,S1PR +S1PR,FPLX,000427,S1PR +S6,UP,P62753,RS6_HUMAN +S6,IP,IPR000529, +S6K,FPLX,000328,P70S6K +S6K1,UP,P23443,KS6B1_HUMAN +SAA,FPLX,000428,SAA +SAC,GO,GO:0033316,meiotic spindle assembly checkpoint +SAF-1,UP,P56270,MAZ_HUMAN +SAHA,PUBCHEM,5311, +SAHA,CHEBI,CHEBI:45716,vorinostat +SAHA,CHEMBL,CHEMBL98, +sarcoplasmic/endoplasmic reticulum calcium ATPase,FPLX,000430,SERCA +SB203580,PUBCHEM,176155, +SB203580,CHEBI,CHEBI:90705,SB 203580 +SCF,UP,P21583,SCF_HUMAN +senescence,GO,GO:0090398,cellular senescence +senescence,MESH,D016922,Cellular Senescence +SERCA,FPLX,000430,SERCA +SERCAs,FPLX,000430,SERCA +SFK,FPLX,000451,SRC +SFN,CHEBI,CHEBI:47807,sulforaphane +SFN,PUBCHEM,5350, +Shc family,FPLX,000432,SHC +SHC,FPLX,000432,SHC +Shc,FPLX,000432,SHC +shikonin,CHEBI,CHEBI:81068,Shikonin +shikonin,PUBCHEM,479503, +SHP-2,UP,Q06124,PTN11_HUMAN +SHP2,UP,Q06124,PTN11_HUMAN +Shp2,UP,Q06124,PTN11_HUMAN +Sialytransferase,FPLX,000202,GTF_family_29 +Sialytransferases,FPLX,000202,GTF_family_29 +sialytransferase,FPLX,000202,GTF_family_29 +sialytransferases,FPLX,000202,GTF_family_29 +signal transduction,GO,GO:0007165,signal transduction +signal transduction,MESH,D015398,Signal Transduction +simvastatin,CHEBI,CHEBI:9150,simvastatin +simvastatin,PUBCHEM,54454, +SIRT1,UP,Q96EB6,SIR1_HUMAN +Sirt1,UP,Q96EB6,SIR1_HUMAN +Skp2,UP,Q13309,SKP2_HUMAN +SLC2,FPLX,000434,SLC2A +slow myosin,FPLX,000299,MYL_slow +SLP-76,UP,Q13094,LCP2_HUMAN +SLRP,FPLX,000435,SLRP +SLRPs,FPLX,000435,SLRP +SLRR,FPLX,000435,SLRP +SLRRs,FPLX,000435,SLRP +SMAD 2/3,FPLX,000443,SMAD2_3 +SMAD,FPLX,000441,SMAD +Smad,FPLX,000441,SMAD +smad,FPLX,000441,SMAD +Smad2,UP,Q15796,SMAD2_HUMAN +smad2,UP,Q15796,SMAD2_HUMAN +SMAD2/3,FPLX,000443,SMAD2_3 +Smad2/3,FPLX,000443,SMAD2_3 +Smad3,UP,P84022,SMAD3_HUMAN +Smad4,UP,Q13485,SMAD4_HUMAN +small HSPs,FPLX,000245,HSPB +small leucine rich proteoglycan family,FPLX,000435,SLRP +small leucine rich proteoglycan,FPLX,000435,SLRP +small leucine rich proteoglycans,FPLX,000435,SLRP +small leucine-rich proteoglycan family,FPLX,000435,SLRP +small leucine-rich proteoglycan,FPLX,000435,SLRP +small leucine-rich proteoglycans,FPLX,000435,SLRP +SMC1,FPLX,000444,SMC1 +Smc1,FPLX,000444,SMC1 +SNAI family,FPLX,000446,SNAI +SNAI,FPLX,000446,SNAI +Snail,UP,O95863,SNAI1_HUMAN +SOD,FPLX,000447,SOD +Sorafenib,PUBCHEM,216239, +Sorafenib,CHEBI,CHEBI:50924,sorafenib +sorafenib,PUBCHEM,216239, +sorafenib,CHEBI,CHEBI:50924,sorafenib +SOS,FPLX,000448,SOS +Sos-1,UP,Q07889,SOS1_HUMAN +SOS1,UP,Q07889,SOS1_HUMAN +Sos1,UP,Q07889,SOS1_HUMAN +SOX2,UP,P48431,SOX2_HUMAN +Sp1,UP,P08047,SP1_HUMAN +SP600125,PUBCHEM,8515, +SP600125,CHEBI,CHEBI:90695,"anthra[1,9-cd]pyrazol-6(2H)-one" +SPC,CHEBI,CHEBI:17689,sphingosine-1-phosphocholine +SPC,PUBCHEM,9847290, +Sphingosine 1-phosphate receptor,FPLX,000427,S1PR +sphingosine-1-phosphate receptors,FPLX,000427,S1PR +SPRED,FPLX,000449,SPRED +SPRY,FPLX,000450,SPRY +SR Ca(2+)-ATPase,FPLX,000430,SERCA +Src family kinase,FPLX,000451,SRC +Src family,FPLX,000451,SRC +src kinases,FPLX,000451,SRC +SRC,UP,P12931,SRC_HUMAN +Src,UP,P12931,SRC_HUMAN +SRC-family kinases,FPLX,000451,SRC +Src-kinases,FPLX,000451,SRC +SREBF family,FPLX,000452,SREBF +SREBF,FPLX,000452,SREBF +SRF,UP,P11831,SRF_HUMAN +StAR,HGNC,11359,STAR +StAR,UP,P49675,STAR_HUMAN +STAT,FPLX,000453,STAT +STAT1,UP,P42224,STAT1_HUMAN +STAT3,UP,P40763,STAT3_HUMAN +Stat3,UP,P40763,STAT3_HUMAN +STAT5,FPLX,000454,STAT5 +Stat5,FPLX,000454,STAT5 +STATs,FPLX,000453,STAT +Staurosporine,PUBCHEM,44259, +Staurosporine,CHEBI,CHEBI:15738,staurosporine +staurosporine,PUBCHEM,44259, +staurosporine,CHEBI,CHEBI:15738,staurosporine +stearoyl-CoA 9-desaturase,FPLX,000429,SCD +Stearoyl-CoA desaturase,FPLX,000429,SCD +stearoyl-CoA desaturase,FPLX,000429,SCD +sterol regulatory element binding protein,FPLX,000452,SREBF +sterol regulatory element-binding factor,FPLX,000452,SREBF +STING,UP,Q86WV6,STING_HUMAN +STT3,FPLX,000455,STT3 +STZ,PUBCHEM,29327, +STZ,UP,Q11206,SIA4C_HUMAN +succinate dehydrogenase (ubiquinone),FPLX,000502,ETC_complex_II +succinate dehydrogenase,FPLX,000502,ETC_complex_II +Sulfonylurea Receptor,FPLX,000456,Sulfonylurea_receptor +sulfonylurea receptor,FPLX,000456,Sulfonylurea_receptor +sulfonylurea receptors,FPLX,000456,Sulfonylurea_receptor +sulforaphane,PUBCHEM,5350, +sulforaphane,CHEBI,CHEBI:47807,sulforaphane +superoxide,CHEBI,CHEBI:18421,superoxide +superoxide,PUBCHEM,5359597, +SUR,FPLX,000456,Sulfonylurea_receptor +Survivin,UP,O15392,BIRC5_HUMAN +survivin,UP,O15392,BIRC5_HUMAN +SWI and SNF complex,FPLX,000457,SWI_SNF +SWI/SNF complex,FPLX,000457,SWI_SNF +SWI/SNF,FPLX,000457,SWI_SNF +SWI/SNF-like,FPLX,000457,SWI_SNF +Syk,UP,P43405,KSYK_HUMAN +SYNJ2,UP,O15056,SYNJ2_HUMAN +T-cell factor (TCF)/lymphoid enhancer factor,FPLX,000460,TCF_LEF +TAK1,UP,O43318,M3K7_HUMAN +TAK165,PUBCHEM,6444692, +tamoxifen,PUBCHEM,2733526, +tamoxifen,CHEBI,CHEBI:41774,tamoxifen +TAP transporter,FPLX,000459,TAP +TAP,FPLX,000459,TAP +TAp73,UP,O15350,P73_HUMAN +TAS-116,PUBCHEM,67501411, +Tat,UP,P04608,TAT_HV1H2 +tau,UP,P10636,TAU_HUMAN +Tax,UP,P03409,TAX_HTL1A +TBK1,UP,Q9UHD2,TBK1_HUMAN +TCF,FPLX,000460,TCF_LEF +Tcf,FPLX,000460,TCF_LEF +Tcf/Lef,FPLX,000460,TCF_LEF +TCR,FPLX,000461,TCR +TDRG1,UP,Q3Y452,TDRG1_HUMAN +telomerase,UP,O14746,TERT_HUMAN +Temozolomide,CHEBI,CHEBI:72564,temozolomide +Temozolomide,PUBCHEM,5394, +temozolomide,CHEBI,CHEBI:72564,temozolomide +temozolomide,PUBCHEM,5394, +Tenascin,FPLX,000473,TN +tenascin,FPLX,000473,TN +TFDP,FPLX,000464,TFDP +TFIIE,FPLX,000196,GTF2E +TFIIF,FPLX,000197,GTF2F +TGF beta receptor,FPLX,000466,TGFBR +TGF beta,FPLX,000465,TGFB +TGF β receptor,FPLX,000466,TGFBR +TGF β,FPLX,000465,TGFB +TGF-alpha,UP,P01135,TGFA_HUMAN +TGF-b,FPLX,000465,TGFB +TGF-beta family,FPLX,000465,TGFB +TGF-beta receptor,FPLX,000466,TGFBR +TGF-beta receptors,FPLX,000466,TGFBR +TGF-beta,FPLX,000465,TGFB +TGF-beta1,UP,P01137,TGFB1_HUMAN +TGF-β receptor,FPLX,000466,TGFBR +TGF-β receptors,FPLX,000466,TGFBR +TGF-β,FPLX,000465,TGFB +TGF-α,UP,P01135,TGFA_HUMAN +TGF-β1,UP,P01137,TGFB1_HUMAN +TGFalpha,UP,P01135,TGFA_HUMAN +TGFB family,FPLX,000465,TGFB +TGFB,FPLX,000465,TGFB +TGFbeta,FPLX,000465,TGFB +TGFbeta1,UP,P01137,TGFB1_HUMAN +TGFBR family,FPLX,000466,TGFBR +TGFBR,FPLX,000466,TGFBR +TGFβ receptor,FPLX,000466,TGFBR +TGFβ receptors,FPLX,000466,TGFBR +TGFβ,FPLX,000465,TGFB +TGFα,UP,P01135,TGFA_HUMAN +TGFβ1,UP,P01137,TGFB1_HUMAN +thapsigargin,PUBCHEM,446378, +thapsigargin,CHEBI,CHEBI:9516,thapsigargin +Thioredoxin reductase,FPLX,000488,TXNRD +thioredoxin reductase,FPLX,000488,TXNRD +Thioredoxin,FPLX,000487,TXN +thioredoxin,FPLX,000487,TXN +Thioredoxin,UP,P10599,THIO_HUMAN +thioredoxin,UP,P10599,THIO_HUMAN +thioredoxins,FPLX,000487,TXN +thrombin,IP,IPR003966, +thrombin,UP,P00734,THRB_HUMAN +thrombin-anti-thrombin III complexes,FPLX,000469,Thrombin_antithrombin +thrombospondin protein,FPLX,000467,THBS +Thrombospondin,FPLX,000467,THBS +thrombospondin,FPLX,000467,THBS +Thrombospondins,FPLX,000467,THBS +thrombospondins,FPLX,000467,THBS +thyroid hormone receptor,FPLX,000468,THR +TIAM,FPLX,000470,TIAM +TIAM1,UP,Q13009,TIAM1_HUMAN +Tiam1,UP,Q13009,TIAM1_HUMAN +TIAM2,UP,Q8IVF5,TIAM2_HUMAN +Tiam2,UP,Q8IVF5,TIAM2_HUMAN +TIF-IB,FPLX,000471,TIF_IB +tipifarnib,PUBCHEM,159324, +tipifarnib,CHEBI,CHEBI:141969,tipifarnib +tissue kallikrein,FPLX,000271,KLK +tissue kallikreins,FPLX,000271,KLK +TLR,FPLX,000472,TLR +TLR2,UP,O60603,TLR2_HUMAN +TLR4,UP,O00206,TLR4_HUMAN +TMZ,CHEBI,CHEBI:72564,temozolomide +TMZ,PUBCHEM,5394, +TN-C,FPLX,000478,Troponin_C +TnC,FPLX,000478,Troponin_C +TNF,UP,P01375,TNFA_HUMAN +TNF-alpha,UP,P01375,TNFA_HUMAN +TNF-R superfamily,FPLX,000475,TNFRSF +TNF-receptor family,FPLX,000475,TNFRSF +TNF-α,UP,P01375,TNFA_HUMAN +TNFalpha,UP,P01375,TNFA_HUMAN +TNFR family,FPLX,000475,TNFRSF +TNFR subfamily,FPLX,000475,TNFRSF +TNFR superfamily members,FPLX,000475,TNFRSF +TNFR superfamily receptors,FPLX,000475,TNFRSF +TNFR superfamily,FPLX,000475,TNFRSF +TNFR,FPLX,000475,TNFRSF +TNFR1,UP,P19438,TNR1A_HUMAN +TNFα,UP,P01375,TNFA_HUMAN +topoisomerase II,FPLX,000476,TOP2 +TORC1,FPLX,000293,mTORC1 +TORC2,FPLX,000294,mTORC2 +TP53,UP,P04637,P53_HUMAN +TPA,PUBCHEM,27924, +TPA,CHEBI,CHEBI:37537,phorbol 13-acetate 12-myristate +Tpl2,HGNC,6860,MAP3K8 +TPNI,FPLX,000479,Troponin_I +TPNT,FPLX,000480,Troponin_T +TQ,PUBCHEM,10281, +TQ,CHEBI,CHEBI:113532,"2-methyl-5-propan-2-ylcyclohexa-2,5-diene-1,4-dione" +TRAF2,UP,Q12933,TRAF2_HUMAN +TRAF3,UP,Q13114,TRAF3_HUMAN +TRAF6,UP,Q9Y4K3,TRAF6_HUMAN +TRAIL,UP,P50591,TNF10_HUMAN +trametinib,CHEBI,CHEBI:75998,trametinib +trametinib,PUBCHEM,11707110, +Transcription factor AP-2,FPLX,000463,TFAP2 +transcription factor AP-2,FPLX,000463,TFAP2 +transcription factor DP,FPLX,000464,TFDP +transcription factor II E,FPLX,000196,GTF2E +transcription factor II F,FPLX,000197,GTF2F +transcription factor IIE,FPLX,000196,GTF2E +transcription factor IIF,FPLX,000197,GTF2F +transcription,GO,GO:0006351,"transcription, DNA-templated" +transcription,MESH,D014158,"Transcription, Genetic" +transcriptional cofactor complex CRSP,FPLX,000122,CRSP +transforming growth factor beta,FPLX,000465,TGFB +transforming growth factor β,FPLX,000465,TGFB +transforming growth factor-beta,FPLX,000465,TGFB +transforming growth factor-β,FPLX,000465,TGFB +translation,GO,GO:0006412,translation +translation,MESH,D014176,Protein Biosynthesis +transport,GO,GO:0006810,transport +trastuzumab,MESH,D000068878,Trastuzumab +trastuzumab,CHEMBL,1201585, +TRiC,FPLX,000085,CCT_complex +TRIM,UP,Q6PIZ9,TRAT1_HUMAN +Trk receptor,FPLX,000321,NTRK +trk receptor,FPLX,000321,NTRK +Trk receptors,FPLX,000321,NTRK +trk receptors,FPLX,000321,NTRK +TrkA,UP,P04629,NTRK1_HUMAN +TrkB,UP,Q16620,NTRK2_HUMAN +troponin C,FPLX,000478,Troponin_C +troponin complex,FPLX,000477,Troponin +troponin I,FPLX,000479,Troponin_I +troponin T,FPLX,000480,Troponin_T +troponin,FPLX,000477,Troponin +troponins,FPLX,000477,Troponin +trypsin,CHEBI,CHEBI:9765,Trypsin +Tryptase,FPLX,000481,Tryptase +tryptase,FPLX,000481,Tryptase +tryptases,FPLX,000481,Tryptase +TSA,PUBCHEM,444732, +TSA,CHEBI,CHEBI:46024,trichostatin A +TSC,FPLX,000482,TSC +TSC1,UP,Q92574,TSC1_HUMAN +TSC2,UP,P49815,TSC2_HUMAN +TUBA,FPLX,000483,TUBA +TUBB,FPLX,000484,TUBB +tuberin,UP,P49815,TSC2_HUMAN +tubulin alpha chain,FPLX,000483,TUBA +tubulin beta chain,FPLX,000484,TUBB +tubulin beta,FPLX,000484,TUBB +tubulin delta,HGNC,16811,TUBD1 +tubulin epsilon,HGNC,20775,TUBE1 +tubulin gamma,FPLX,000485,TUBG +tubulin α chain,FPLX,000483,TUBA +tubulin β chain,FPLX,000484,TUBB +tubulin β,FPLX,000484,TUBB +tubulin γ,FPLX,000485,TUBG +tubulin δ,HGNC,16811,TUBD1 +tubulin ε,HGNC,20775,TUBE1 +tubulin,FPLX,000486,Tubulin +tumor necrosis factor,UP,P01375,TNFA_HUMAN +tumorigenesis,MESH,D063646,Carcinogenesis +tunicamycin,CHEBI,CHEBI:29699,tunicamycin +tunicamycin,PUBCHEM,56927680, +type 2 phosphatidic acid phosphatase,FPLX,000374,PPAP2 +type 2 phosphatidic acid phosphatases,FPLX,000374,PPAP2 +type 4 cyclic nucleotide phosphodiesterase,FPLX,000338,PDE4 +Type I collagen,FPLX,000109,COL1 +type I collagen,FPLX,000109,COL1 +type II phosphatidic acid phosphatase,FPLX,000374,PPAP2 +type II phosphatidic acid phosphatases,FPLX,000374,PPAP2 +type V collagen,FPLX,000111,COL5 +type-V collagen,FPLX,000111,COL5 +U0126,PUBCHEM,3006531, +U0126,CHEBI,CHEBI:90693,U0126 +Ub,FPLX,000490,Ubiquitin +ub,FPLX,000490,Ubiquitin +UBE2,FPLX,000489,UBE2 +ubiquitin conjugating enzyme,FPLX,000489,UBE2 +Ubiquitin,FPLX,000490,Ubiquitin +ubiquitin,FPLX,000490,Ubiquitin +ubiquitin-conjugating enzymes,FPLX,000489,UBE2 +UGT,FPLX,000492,UGT +uPA,UP,P00749,UROK_HUMAN +uPAR,UP,Q03405,UPAR_HUMAN +vascular endothelial growth factor,FPLX,000495,VEGF +VAV family,FPLX,000494,VAV +Vav,FPLX,000494,VAV +Vav1,UP,P15498,VAV_HUMAN +VCAM-1,UP,P19320,VCAM1_HUMAN +VEGF receptor,FPLX,000496,VEGFR +VEGF receptors,FPLX,000496,VEGFR +VEGF,FPLX,000495,VEGF +VEGF-A,UP,P15692,VEGFA_HUMAN +VEGFR ligand,FPLX,000496,VEGFR +VEGFR,FPLX,000496,VEGFR +VEGFR-2,UP,P35968,VGFR2_HUMAN +VEGFR2,UP,P35968,VGFR2_HUMAN +VEGFRs,FPLX,000496,VEGFR +Vemurafenib,PUBCHEM,42611257, +Vemurafenib,CHEBI,CHEBI:63637,vemurafenib +vemurafenib,PUBCHEM,42611257, +vemurafenib,CHEBI,CHEBI:63637,vemurafenib +vitronectin receptor (integrin),FPLX,000261,Integrins +VLDL,CHEBI,CHEBI:39027,very-low-density lipoprotein +vorinostat,PUBCHEM,5311, +vorinostat,CHEBI,CHEBI:45716,vorinostat +VPA,PUBCHEM,3121, +VPA,CHEBI,CHEBI:39867,valproic acid +Vpr,UP,P05928,VPR_HV1BR +Vpu,UP,P05919,VPU_HV1H2 +WA,PUBCHEM,265237, +WA,CHEBI,CHEBI:69120,withaferin A +wild type c-Cbl,UP,P22681,CBL_HUMAN +WNT,FPLX,000497,Wnt +Wnt,FPLX,000497,Wnt +Wnt5a,UP,P41221,WNT5A_HUMAN +wogonin,PUBCHEM,5281703, +wogonin,CHEBI,CHEBI:10043,wogonin +XIAP,UP,P98170,XIAP_HUMAN +XYLT,FPLX,000185,GCNT +Xylosyltransferase,FPLX,000185,GCNT +Xylosyltransferases,FPLX,000185,GCNT +xylosyltransferase,FPLX,000185,GCNT +xylosyltransferases,FPLX,000185,GCNT +Y box binding protein,FPLX,000498,YBX +Y-box-binding protein,FPLX,000498,YBX +YAP,UP,P46937,YAP1_HUMAN +YAP1,UP,P46937,YAP1_HUMAN +YBX protein family,FPLX,000498,YBX +ZEB1,UP,P37275,ZEB1_HUMAN +Zeb1,UP,P37275,ZEB1_HUMAN +β adrenergic receptor kinase,FPLX,000022,ADRBK +α catenin,FPLX,000126,CTNNA +β interferons,FPLX,000247,IFNB +γ secretase,FPLX,000181,Gamma_secretase +α tubulin,FPLX,000483,TUBA +γ tubulin,FPLX,000485,TUBG +α(2)-adrenoceptors,FPLX,000020,ADRA2 +α(2)-ARs,FPLX,000020,ADRA2 +α-adrenergic receptor,FPLX,000019,ADRA +β-adrenergic receptor,FPLX,000021,ADRB +α-adrenoreceptor,FPLX,000019,ADRA +β-adrenoreceptor,FPLX,000021,ADRB +α-adrenoreceptors,FPLX,000019,ADRA +γ-aminobutyric-acid A receptor,FPLX,000179,GABR +α-catenin,FPLX,000126,CTNNA +β-catenin,UP,P35222,CTNB1_HUMAN +β-TrCP,UP,Q9Y297,FBW1A_HUMAN +γ-tubulin,FPLX,000485,TUBG +δ-tubulin,HGNC,16811,TUBD1 +ε-tubulin,HGNC,20775,TUBE1 +α1β1γ1,FPLX,000032,AMPK_A1B1G1 +α1β1γ2,FPLX,000033,AMPK_A1B1G2 +α1β1γ3,FPLX,000034,AMPK_A1B1G3 +α1β2γ1,FPLX,000035,AMPK_A1B2G1 +α1β2γ2,FPLX,000036,AMPK_A1B2G2 +α2-AR,FPLX,000020,ADRA2 +α2β1γ1,FPLX,000038,AMPK_A2B1G1 +α2β2γ1,FPLX,000041,AMPK_A2B2G1 +α2β2γ2,FPLX,000042,AMPK_A2B2G2 +α2β2γ3,FPLX,000043,AMPK_A2B2G3 +βAR,FPLX,000021,ADRB +βARK,FPLX,000022,ADRBK +receptor,GO,GO:0038023,signaling receptor activity +eGFR,MESH,D005919,Glomerular Filtration Rate +CDK1/2,FPLX,000093,CDK1_2 +cdk1/2,FPLX,000093,CDK1_2 +Cdk1/2,FPLX,000093,CDK1_2 +Chk1/2,FPLX,000098,CHEK +chromosomal instability,MESH,D043171,Chromosomal Instability +chromosomal instability,NCIT,C48195, +chromosomal instabiliy,MESH,D043171,Chromosomal Instability +chromosomal instabiliy,NCIT,C48195, +CIN,MESH,D043171,Chromosomal Instability +CIN,NCIT,C48195, +CycK,HGNC,1596,CCNK +CycK1,HGNC,1596,CCNK +dinaciclib,PUBCHEM,46926350, +dinaciclib,CHEMBL,CHEMBL2103840, +dinaciclib,CHEBI,CHEBI:95060,"2-[(2S)-1-[3-ethyl-7-[(1-oxido-3-pyridin-1-iumyl)methylamino]-5-pyrazolo[1,5-a]pyrimidinyl]-2-piperidinyl]ethanol" +Dinaciclib,PUBCHEM,46926350, +Dinaciclib,CHEMBL,CHEMBL2103840, +Dinaciclib,CHEBI,CHEBI:95060,"2-[(2S)-1-[3-ethyl-7-[(1-oxido-3-pyridin-1-iumyl)methylamino]-5-pyrazolo[1,5-a]pyrimidinyl]-2-piperidinyl]ethanol" +Ebp1,HGNC,8550,PA2G4 +EBP1,HGNC,8550,PA2G4 +erbB,FPLX,000160,ERBB +Fer-1,PUBCHEM,4068248, +HK2,HGNC,4923,HK2 +NLE,CHEBI,CHEBI:38473,azadirachtin +PD-1,UP,Q15116,PDCD1_HUMAN +PD-1,HGNC,8760,PDCD1 +Se,PUBCHEM,6326970, +Se,CHEBI,CHEBI:27568,selenium atom +THZ531,PUBCHEM,118025540, +THZ531,CHEBI,CHEBI:143122,THZ531 +Hh,FPLX,000226,Hedgehog +SIK,FPLX,000433,SIK +salt inducible kinase,FPLX,000433,SIK +Sik,UP,Q64434,PTK6_MOUSE +DYRK,FPLX,000146,DYRK +Augmin,FPLX,000061,Augmin +HAUS,FPLX,000061,Augmin +HAUS complex,FPLX,000061,Augmin +CRTC,FPLX,000123,CRTC diff --git a/famplex/resources/metadata.json b/famplex/resources/metadata.json new file mode 100644 index 000000000..8e1c57a8e --- /dev/null +++ b/famplex/resources/metadata.json @@ -0,0 +1,730 @@ +{ + "Time Exported": "Sun Jul 21 18:47:42 2019", + "Unlabelled Groundings": [ + { + "db": "CHEMBL", + "db_id": "1201577" + }, + { + "db": "CHEMBL", + "db_id": "1201585" + }, + { + "db": "CHEMBL", + "db_id": "CHEMBL2103840" + }, + { + "db": "CHEMBL", + "db_id": "CHEMBL402548" + }, + { + "db": "CHEMBL", + "db_id": "CHEMBL98" + }, + { + "db": "HMDB", + "db_id": "HMDB00045" + }, + { + "db": "HMDB", + "db_id": "HMDB00058" + }, + { + "db": "HMDB", + "db_id": "HMDB00108" + }, + { + "db": "HMDB", + "db_id": "HMDB00122" + }, + { + "db": "HMDB", + "db_id": "HMDB00125" + }, + { + "db": "HMDB", + "db_id": "HMDB00220" + }, + { + "db": "HMDB", + "db_id": "HMDB00221" + }, + { + "db": "HMDB", + "db_id": "HMDB00464" + }, + { + "db": "HMDB", + "db_id": "HMDB00538" + }, + { + "db": "HMDB", + "db_id": "HMDB01201" + }, + { + "db": "HMDB", + "db_id": "HMDB01273" + }, + { + "db": "HMDB", + "db_id": "HMDB01377" + }, + { + "db": "HMDB", + "db_id": "HMDB03378" + }, + { + "db": "HMDB", + "db_id": "HMDB06219" + }, + { + "db": "IP", + "db_id": "IPR000529" + }, + { + "db": "IP", + "db_id": "IPR003966" + }, + { + "db": "IP", + "db_id": "IPR015503" + }, + { + "db": "LINCS", + "db_id": "10023-103" + }, + { + "db": "LINCS", + "db_id": "10133-101" + }, + { + "db": "LINCS", + "db_id": "10232-101" + }, + { + "db": "LNCRNADB", + "db_id": "HOTAIR" + }, + { + "db": "MESH", + "db_id": "0007249" + }, + { + "db": "NCIT", + "db_id": "C16404" + }, + { + "db": "NCIT", + "db_id": "C26169" + }, + { + "db": "NCIT", + "db_id": "C48195" + }, + { + "db": "NONCODE", + "db_id": "NONHSAT028507.2" + }, + { + "db": "PUBCHEM", + "db_id": "10127622" + }, + { + "db": "PUBCHEM", + "db_id": "10184653" + }, + { + "db": "PUBCHEM", + "db_id": "10281" + }, + { + "db": "PUBCHEM", + "db_id": "10494" + }, + { + "db": "PUBCHEM", + "db_id": "10836" + }, + { + "db": "PUBCHEM", + "db_id": "11302" + }, + { + "db": "PUBCHEM", + "db_id": "11442891" + }, + { + "db": "PUBCHEM", + "db_id": "11707110" + }, + { + "db": "PUBCHEM", + "db_id": "118025540" + }, + { + "db": "PUBCHEM", + "db_id": "11977753" + }, + { + "db": "PUBCHEM", + "db_id": "123631" + }, + { + "db": "PUBCHEM", + "db_id": "124886" + }, + { + "db": "PUBCHEM", + "db_id": "135398619" + }, + { + "db": "PUBCHEM", + "db_id": "135398633" + }, + { + "db": "PUBCHEM", + "db_id": "135398634" + }, + { + "db": "PUBCHEM", + "db_id": "135565635" + }, + { + "db": "PUBCHEM", + "db_id": "145068" + }, + { + "db": "PUBCHEM", + "db_id": "148124" + }, + { + "db": "PUBCHEM", + "db_id": "1548943" + }, + { + "db": "PUBCHEM", + "db_id": "159324" + }, + { + "db": "PUBCHEM", + "db_id": "161468" + }, + { + "db": "PUBCHEM", + "db_id": "16755649" + }, + { + "db": "PUBCHEM", + "db_id": "176155" + }, + { + "db": "PUBCHEM", + "db_id": "176870" + 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+HGNC,3688,FGFR1,isa,FPLX,000168,FGFR +HGNC,3689,FGFR2,isa,FPLX,000168,FGFR +HGNC,3690,FGFR3,isa,FPLX,000168,FGFR +HGNC,3691,FGFR4,isa,FPLX,000168,FGFR +HGNC,3693,FGFRL1,isa,FPLX,000168,FGFR +HGNC,4616,GSK3A,isa,FPLX,000194,GSK3 +HGNC,4617,GSK3B,isa,FPLX,000194,GSK3 +HGNC,4852,HDAC1,isa,FPLX,000221,HDAC_I +HGNC,4853,HDAC2,isa,FPLX,000221,HDAC_I +HGNC,4854,HDAC3,isa,FPLX,000221,HDAC_I +HGNC,13315,HDAC8,isa,FPLX,000221,HDAC_I +HGNC,14063,HDAC4,isa,FPLX,000222,HDAC_II +HGNC,14068,HDAC5,isa,FPLX,000222,HDAC_II +HGNC,14067,HDAC7,isa,FPLX,000222,HDAC_II +HGNC,14065,HDAC9,isa,FPLX,000222,HDAC_II +HGNC,14064,HDAC6,isa,FPLX,000222,HDAC_II +HGNC,18128,HDAC10,isa,FPLX,000222,HDAC_II +HGNC,14929,SIRT1,isa,FPLX,000223,HDAC_III +HGNC,10886,SIRT2,isa,FPLX,000223,HDAC_III +HGNC,14931,SIRT3,isa,FPLX,000223,HDAC_III +HGNC,14932,SIRT4,isa,FPLX,000223,HDAC_III +HGNC,14933,SIRT5,isa,FPLX,000223,HDAC_III +HGNC,14934,SIRT6,isa,FPLX,000223,HDAC_III +HGNC,14935,SIRT7,isa,FPLX,000223,HDAC_III +HGNC,19086,HDAC11,isa,FPLX,000224,HDAC_IV +FPLX,000221,HDAC_I,isa,FPLX,000220,HDAC +FPLX,000222,HDAC_II,isa,FPLX,000220,HDAC +FPLX,000223,HDAC_III,isa,FPLX,000220,HDAC +FPLX,000224,HDAC_IV,isa,FPLX,000220,HDAC +HGNC,4910,HIF1A,partof,FPLX,000230,HIF1 +HGNC,700,ARNT,partof,FPLX,000230,HIF1 +HGNC,4910,HIF1A,isa,FPLX,000231,HIF_alpha +HGNC,3374,EPAS1,isa,FPLX,000231,HIF_alpha +HGNC,15825,HIF3A,isa,FPLX,000231,HIF_alpha +HGNC,700,ARNT,isa,FPLX,000232,HIF_beta +HGNC,16876,ARNT2,isa,FPLX,000232,HIF_beta +HGNC,701,ARNTL,isa,FPLX,000232,HIF_beta +FPLX,000231,HIF_alpha,partof,FPLX,000229,HIF +FPLX,000232,HIF_beta,partof,FPLX,000229,HIF +FPLX,000242,HSP90A,isa,FPLX,000241,HSP90 +FPLX,000243,HSP90AA,isa,FPLX,000242,HSP90A +HGNC,5253,HSP90AA1,isa,FPLX,000243,HSP90AA +HGNC,5258,HSP90AB1,isa,FPLX,000242,HSP90A +HGNC,12028,HSP90B1,isa,FPLX,000241,HSP90 +HGNC,16264,TRAP1,isa,FPLX,000241,HSP90 +FPLX,000234,Histone_H1,isa,FPLX,000233,Histone +FPLX,000235,Histone_H2A,isa,FPLX,000233,Histone +FPLX,000236,Histone_H2B,isa,FPLX,000233,Histone +FPLX,000237,Histone_H3,isa,FPLX,000233,Histone +FPLX,000238,Histone_H4,isa,FPLX,000233,Histone +HGNC,4714,H1F0,isa,FPLX,000234,Histone_H1 +HGNC,18463,H1FOO,isa,FPLX,000234,Histone_H1 +HGNC,4722,H1FX,isa,FPLX,000234,Histone_H1 +HGNC,4715,HIST1H1A,isa,FPLX,000234,Histone_H1 +HGNC,4719,HIST1H1B,isa,FPLX,000234,Histone_H1 +HGNC,4716,HIST1H1C,isa,FPLX,000234,Histone_H1 +HGNC,4717,HIST1H1D,isa,FPLX,000234,Histone_H1 +HGNC,4718,HIST1H1E,isa,FPLX,000234,Histone_H1 +HGNC,4720,HIST1H1T,isa,FPLX,000234,Histone_H1 +HGNC,24893,H1FNT,isa,FPLX,000234,Histone_H1 +UP,P0C0S8,H2A1_HUMAN,isa,FPLX,000235,Histone_H2A +HGNC,22516,H2AFB1,isa,FPLX,000235,Histone_H2A +UP,P0C5Y9,H2AB1_HUMAN,isa,FPLX,000235,Histone_H2A +HGNC,14456,H2AFJ,isa,FPLX,000235,Histone_H2A +HGNC,20664,H2AFV,isa,FPLX,000235,Histone_H2A +HGNC,4739,H2AFX,isa,FPLX,000235,Histone_H2A +HGNC,4740,H2AFY,isa,FPLX,000235,Histone_H2A +HGNC,14453,H2AFY2,isa,FPLX,000235,Histone_H2A +HGNC,4741,H2AFZ,isa,FPLX,000235,Histone_H2A +HGNC,18729,HIST1H2AA,isa,FPLX,000235,Histone_H2A +HGNC,4733,HIST1H2AC,isa,FPLX,000235,Histone_H2A +HGNC,4729,HIST1H2AD,isa,FPLX,000235,Histone_H2A +HGNC,13671,HIST1H2AH,isa,FPLX,000235,Histone_H2A +HGNC,4727,HIST1H2AJ,isa,FPLX,000235,Histone_H2A +HGNC,20508,HIST2H2AB,isa,FPLX,000235,Histone_H2A +HGNC,4738,HIST2H2AC,isa,FPLX,000235,Histone_H2A +HGNC,20507,HIST3H2A,isa,FPLX,000235,Histone_H2A +UP,P04908,H2A1B_HUMAN,isa,FPLX,000235,Histone_H2A +UP,Q6FI13,H2A2A_HUMAN,isa,FPLX,000235,Histone_H2A +UP,P62807,H2B1C_HUMAN,isa,FPLX,000236,Histone_H2B +HGNC,18730,HIST1H2BA,isa,FPLX,000236,Histone_H2B +HGNC,4751,HIST1H2BB,isa,FPLX,000236,Histone_H2B +HGNC,4747,HIST1H2BD,isa,FPLX,000236,Histone_H2B +HGNC,4755,HIST1H2BH,isa,FPLX,000236,Histone_H2B +HGNC,4761,HIST1H2BJ,isa,FPLX,000236,Histone_H2B +HGNC,13954,HIST1H2BK,isa,FPLX,000236,Histone_H2B +HGNC,4748,HIST1H2BL,isa,FPLX,000236,Histone_H2B +HGNC,4750,HIST1H2BM,isa,FPLX,000236,Histone_H2B +HGNC,4749,HIST1H2BN,isa,FPLX,000236,Histone_H2B +HGNC,4758,HIST1H2BO,isa,FPLX,000236,Histone_H2B +HGNC,20516,HIST2H2BC,isa,FPLX,000236,Histone_H2B +HGNC,20517,HIST2H2BD,isa,FPLX,000236,Histone_H2B +HGNC,4760,HIST2H2BE,isa,FPLX,000236,Histone_H2B +HGNC,24700,HIST2H2BF,isa,FPLX,000236,Histone_H2B +HGNC,20514,HIST3H2BB,isa,FPLX,000236,Histone_H2B +HGNC,4762,H2BFS,isa,FPLX,000236,Histone_H2B +HGNC,27867,H2BFM,isa,FPLX,000236,Histone_H2B +HGNC,27252,H2BFWT,isa,FPLX,000236,Histone_H2B +UP,P68431,H31_HUMAN,isa,FPLX,000237,Histone_H3 +UP,Q71DI3,H32_HUMAN,isa,FPLX,000237,Histone_H3 +HGNC,4778,HIST3H3,isa,FPLX,000237,Histone_H3 +UP,P84243,H33_HUMAN,isa,FPLX,000237,Histone_H3 +HGNC,33164,H3F3C,isa,FPLX,000237,Histone_H3 +UP,P62805,H4_HUMAN,isa,FPLX,000238,Histone_H4 +HGNC,4792,HIST1H4G,isa,FPLX,000238,Histone_H4 +HGNC,11362,STAT1,isa,FPLX,000453,STAT +HGNC,11363,STAT2,isa,FPLX,000453,STAT +HGNC,11364,STAT3,isa,FPLX,000453,STAT +HGNC,11365,STAT4,isa,FPLX,000453,STAT +HGNC,11366,STAT5A,isa,FPLX,000454,STAT5 +HGNC,11367,STAT5B,isa,FPLX,000454,STAT5 +HGNC,11368,STAT6,isa,FPLX,000453,STAT +FPLX,000454,STAT5,isa,FPLX,000453,STAT +HGNC,8799,PDGFA,isa,FPLX,000342,PDGF +HGNC,8800,PDGFB,isa,FPLX,000342,PDGF +HGNC,8801,PDGFC,isa,FPLX,000342,PDGF +HGNC,30620,PDGFD,isa,FPLX,000342,PDGF +HGNC,8799,PDGFA,partof,FPLX,000347,PDGF_AA +HGNC,8799,PDGFA,partof,FPLX,000348,PDGF_AB +HGNC,8800,PDGFB,partof,FPLX,000348,PDGF_AB +HGNC,8800,PDGFB,partof,FPLX,000349,PDGF_BB +HGNC,8801,PDGFC,partof,FPLX,000350,PDGF_CC +HGNC,30620,PDGFD,partof,FPLX,000351,PDGF_DD +HGNC,8803,PDGFRA,isa,FPLX,000343,PDGFR +HGNC,8804,PDGFRB,isa,FPLX,000343,PDGFR +HGNC,8803,PDGFRA,partof,FPLX,000344,PDGFR_AA +HGNC,8803,PDGFRA,partof,FPLX,000345,PDGFR_AB +HGNC,8804,PDGFRB,partof,FPLX,000345,PDGFR_AB +HGNC,8804,PDGFRB,partof,FPLX,000346,PDGFR_BB +HGNC,4389,GNAO1,isa,FPLX,000213,G_i_alpha +HGNC,4384,GNAI1,isa,FPLX,000213,G_i_alpha +HGNC,4385,GNAI2,isa,FPLX,000213,G_i_alpha +HGNC,4387,GNAI3,isa,FPLX,000213,G_i_alpha +HGNC,4393,GNAT1,isa,FPLX,000213,G_i_alpha +HGNC,4394,GNAT2,isa,FPLX,000213,G_i_alpha +HGNC,22800,GNAT3,isa,FPLX,000213,G_i_alpha +HGNC,4395,GNAZ,isa,FPLX,000213,G_i_alpha +HGNC,4392,GNAS,isa,FPLX,000218,G_s_alpha +HGNC,4388,GNAL,isa,FPLX,000218,G_s_alpha +HGNC,4390,GNAQ,isa,FPLX,000216,G_q_alpha +HGNC,4379,GNA11,isa,FPLX,000216,G_q_alpha +HGNC,4382,GNA14,isa,FPLX,000216,G_q_alpha +HGNC,4383,GNA15,isa,FPLX,000216,G_q_alpha +HGNC,4380,GNA12,isa,FPLX,000208,G_12_alpha +HGNC,4381,GNA13,isa,FPLX,000208,G_12_alpha +FPLX,000213,G_i_alpha,isa,FPLX,000209,G_alpha +FPLX,000218,G_s_alpha,isa,FPLX,000209,G_alpha +FPLX,000216,G_q_alpha,isa,FPLX,000209,G_alpha +FPLX,000208,G_12_alpha,isa,FPLX,000209,G_alpha +FPLX,000213,G_i_alpha,partof,FPLX,000212,G_i +FPLX,000218,G_s_alpha,partof,FPLX,000217,G_s +FPLX,000216,G_q_alpha,partof,FPLX,000215,G_q +FPLX,000208,G_12_alpha,partof,FPLX,000207,G_12 +FPLX,000212,G_i,isa,FPLX,000214,G_protein +FPLX,000217,G_s,isa,FPLX,000214,G_protein +FPLX,000215,G_q,isa,FPLX,000214,G_protein +FPLX,000207,G_12,isa,FPLX,000214,G_protein +HGNC,19989,ANAPC2,partof,FPLX,000050,APC_C +HGNC,14452,ANAPC11,partof,FPLX,000050,APC_C +HGNC,19988,ANAPC1,partof,FPLX,000050,APC_C +HGNC,1720,CDC16,partof,FPLX,000050,APC_C +HGNC,1728,CDC27,partof,FPLX,000050,APC_C +HGNC,1724,CDC23,partof,FPLX,000050,APC_C +HGNC,15713,ANAPC5,partof,FPLX,000050,APC_C +HGNC,24077,ANAPC10,partof,FPLX,000050,APC_C +HGNC,24531,ANAPC15,partof,FPLX,000050,APC_C +HGNC,24540,ANAPC13,partof,FPLX,000050,APC_C +HGNC,17839,CDC26,partof,FPLX,000050,APC_C +HGNC,26976,ANAPC16,partof,FPLX,000050,APC_C +HGNC,17380,ANAPC7,partof,FPLX,000050,APC_C +HGNC,19990,ANAPC4,partof,FPLX,000050,APC_C +HGNC,3236,EGFR,isa,FPLX,000160,ERBB +HGNC,3430,ERBB2,isa,FPLX,000160,ERBB +HGNC,3431,ERBB3,isa,FPLX,000160,ERBB +HGNC,3432,ERBB4,isa,FPLX,000160,ERBB +HGNC,3296,EIF4G1,isa,FPLX,000155,EIF4G +HGNC,3297,EIF4G2,isa,FPLX,000155,EIF4G +HGNC,3298,EIF4G3,isa,FPLX,000155,EIF4G +HGNC,7775,NFATC1,isa,FPLX,000309,NFAT +HGNC,7776,NFATC2,isa,FPLX,000309,NFAT +HGNC,7777,NFATC3,isa,FPLX,000309,NFAT +HGNC,7778,NFATC4,isa,FPLX,000309,NFAT +HGNC,7774,NFAT5,isa,FPLX,000309,NFAT +HGNC,4706,GYS1,isa,FPLX,000206,GYS +HGNC,4707,GYS2,isa,FPLX,000206,GYS +HGNC,20766,TUBA1A,isa,FPLX,000483,TUBA +HGNC,18809,TUBA1B,isa,FPLX,000483,TUBA +HGNC,20768,TUBA1C,isa,FPLX,000483,TUBA +HGNC,12408,TUBA3C,isa,FPLX,000483,TUBA +HGNC,24071,TUBA3D,isa,FPLX,000483,TUBA +HGNC,20765,TUBA3E,isa,FPLX,000483,TUBA +HGNC,12407,TUBA4A,isa,FPLX,000483,TUBA +HGNC,12410,TUBA8,isa,FPLX,000483,TUBA +HGNC,23534,TUBAL3,isa,FPLX,000483,TUBA +HGNC,20778,TUBB,isa,FPLX,000484,TUBB +HGNC,16257,TUBB1,isa,FPLX,000484,TUBB +HGNC,12412,TUBB2A,isa,FPLX,000484,TUBB +HGNC,30829,TUBB2B,isa,FPLX,000484,TUBB +HGNC,20772,TUBB3,isa,FPLX,000484,TUBB +HGNC,20774,TUBB4A,isa,FPLX,000484,TUBB +HGNC,20771,TUBB4B,isa,FPLX,000484,TUBB +HGNC,20776,TUBB6,isa,FPLX,000484,TUBB +HGNC,12417,TUBG1,isa,FPLX,000485,TUBG +HGNC,12419,TUBG2,isa,FPLX,000485,TUBG +FPLX,000483,TUBA,isa,FPLX,000486,Tubulin +FPLX,000484,TUBB,isa,FPLX,000486,Tubulin +FPLX,000485,TUBG,isa,FPLX,000486,Tubulin +HGNC,16811,TUBD1,isa,FPLX,000486,Tubulin +HGNC,20775,TUBE1,isa,FPLX,000486,Tubulin +HGNC,6190,JAK1,isa,FPLX,000266,JAK +HGNC,6192,JAK2,isa,FPLX,000266,JAK +HGNC,6193,JAK3,isa,FPLX,000266,JAK +HGNC,12440,TYK2,isa,FPLX,000266,JAK +HGNC,1706,CD8A,isa,FPLX,000090,CD8 +HGNC,1707,CD8B,isa,FPLX,000090,CD8 +HGNC,6535,LDHA,isa,FPLX,000275,LDH +HGNC,6541,LDHB,isa,FPLX,000275,LDH +HGNC,6544,LDHC,isa,FPLX,000275,LDH +HGNC,10430,RPS6KA1,isa,FPLX,000329,P90RSK +HGNC,10431,RPS6KA2,isa,FPLX,000329,P90RSK +HGNC,10432,RPS6KA3,isa,FPLX,000329,P90RSK +HGNC,10433,RPS6KA4,isa,FPLX,000329,P90RSK +HGNC,10434,RPS6KA5,isa,FPLX,000329,P90RSK +HGNC,10435,RPS6KA6,isa,FPLX,000329,P90RSK +HGNC,10436,RPS6KB1,isa,FPLX,000328,P70S6K +HGNC,10437,RPS6KB2,isa,FPLX,000328,P70S6K +FPLX,000329,P90RSK,isa,FPLX,000422,RSK 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+HGNC,11101,SMARCA5,partof,FPLX,000457,SWI_SNF +HGNC,11103,SMARCB1,partof,FPLX,000457,SWI_SNF +HGNC,11104,SMARCC1,partof,FPLX,000457,SWI_SNF +HGNC,11105,SMARCC2,partof,FPLX,000457,SWI_SNF +HGNC,11106,SMARCD1,partof,FPLX,000457,SWI_SNF +HGNC,11107,SMARCD2,partof,FPLX,000457,SWI_SNF +HGNC,11108,SMARCD3,partof,FPLX,000457,SWI_SNF +HGNC,11109,SMARCE1,partof,FPLX,000457,SWI_SNF +HGNC,24124,ACTL6A,partof,FPLX,000457,SWI_SNF +HGNC,160,ACTL6B,partof,FPLX,000457,SWI_SNF +HGNC,11099,HLTF,partof,FPLX,000457,SWI_SNF +HGNC,1067,BMP1,isa,FPLX,000067,BMP +HGNC,1069,BMP2,isa,FPLX,000067,BMP +HGNC,1070,BMP3,isa,FPLX,000067,BMP +HGNC,1071,BMP4,isa,FPLX,000067,BMP +HGNC,1072,BMP5,isa,FPLX,000067,BMP +HGNC,1073,BMP6,isa,FPLX,000067,BMP +HGNC,1074,BMP7,isa,FPLX,000067,BMP +HGNC,21650,BMP8A,isa,FPLX,000067,BMP +HGNC,1075,BMP8B,isa,FPLX,000067,BMP +HGNC,20869,BMP10,isa,FPLX,000067,BMP +HGNC,1068,BMP15,isa,FPLX,000067,BMP +HGNC,5969,IL12A,isa,FPLX,000253,IL12 +HGNC,5970,IL12B,isa,FPLX,000253,IL12 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+HGNC,89,ACADM,isa,FPLX,000004,ACAD +HGNC,90,ACADS,isa,FPLX,000004,ACAD +HGNC,92,ACADVL,isa,FPLX,000004,ACAD +HGNC,21597,ACAD10,isa,FPLX,000004,ACAD +HGNC,30211,ACAD11,isa,FPLX,000004,ACAD +HGNC,91,ACADSB,isa,FPLX,000004,ACAD +HGNC,4189,GCDH,isa,FPLX,000004,ACAD +HGNC,6186,IVD,isa,FPLX,000004,ACAD +HGNC,10996,SLC27A2,isa,FPLX,000006,Acetyl_CoA_synthetase +HGNC,3569,ACSL1,isa,FPLX,000006,Acetyl_CoA_synthetase +HGNC,3570,ACSL3,isa,FPLX,000006,Acetyl_CoA_synthetase +HGNC,3571,ACSL4,isa,FPLX,000006,Acetyl_CoA_synthetase +HGNC,16526,ACSL5,isa,FPLX,000006,Acetyl_CoA_synthetase +HGNC,16496,ACSL6,isa,FPLX,000006,Acetyl_CoA_synthetase +HGNC,119,ACOX1,isa,FPLX,000007,ACOX +HGNC,120,ACOX2,isa,FPLX,000007,ACOX +HGNC,121,ACOX3,isa,FPLX,000007,ACOX +HGNC,25621,ACOXL,isa,FPLX,000007,ACOX +HGNC,3569,ACSL1,isa,FPLX,000008,ACSL +HGNC,3570,ACSL3,isa,FPLX,000008,ACSL +HGNC,3571,ACSL4,isa,FPLX,000008,ACSL +HGNC,16526,ACSL5,isa,FPLX,000008,ACSL +HGNC,16496,ACSL6,isa,FPLX,000008,ACSL +HGNC,163,ACTN1,isa,FPLX,000014,ACTN +HGNC,164,ACTN2,isa,FPLX,000014,ACTN +HGNC,165,ACTN3,isa,FPLX,000014,ACTN +HGNC,166,ACTN4,isa,FPLX,000014,ACTN +HGNC,232,ADCY1,isa,FPLX,000017,ADCY +HGNC,233,ADCY2,isa,FPLX,000017,ADCY +HGNC,234,ADCY3,isa,FPLX,000017,ADCY +HGNC,235,ADCY4,isa,FPLX,000017,ADCY +HGNC,236,ADCY5,isa,FPLX,000017,ADCY +HGNC,237,ADCY6,isa,FPLX,000017,ADCY +HGNC,238,ADCY7,isa,FPLX,000017,ADCY +HGNC,239,ADCY8,isa,FPLX,000017,ADCY +HGNC,240,ADCY9,isa,FPLX,000017,ADCY +HGNC,21285,ADCY10,isa,FPLX,000017,ADCY +HGNC,249,ADH1A,isa,FPLX,000018,ADH +HGNC,250,ADH1B,isa,FPLX,000018,ADH +HGNC,251,ADH1C,isa,FPLX,000018,ADH +HGNC,252,ADH4,isa,FPLX,000018,ADH +HGNC,253,ADH5,isa,FPLX,000018,ADH +HGNC,255,ADH6,isa,FPLX,000018,ADH +HGNC,256,ADH7,isa,FPLX,000018,ADH +HGNC,16354,ADHFE1,isa,FPLX,000018,ADH +HGNC,277,ADRA1A,isa,FPLX,000019,ADRA +HGNC,278,ADRA1B,isa,FPLX,000019,ADRA +HGNC,280,ADRA1D,isa,FPLX,000019,ADRA +HGNC,281,ADRA2A,isa,FPLX,000019,ADRA +HGNC,282,ADRA2B,isa,FPLX,000019,ADRA +HGNC,283,ADRA2C,isa,FPLX,000019,ADRA +HGNC,281,ADRA2A,isa,FPLX,000020,ADRA2 +HGNC,282,ADRA2B,isa,FPLX,000020,ADRA2 +HGNC,283,ADRA2C,isa,FPLX,000020,ADRA2 +HGNC,285,ADRB1,isa,FPLX,000021,ADRB +HGNC,286,ADRB2,isa,FPLX,000021,ADRB +HGNC,288,ADRB3,isa,FPLX,000021,ADRB +HGNC,289,GRK2,isa,FPLX,000022,ADRBK +HGNC,290,GRK3,isa,FPLX,000022,ADRBK +HGNC,402,ALDH1A1,isa,FPLX,000024,ALDH +HGNC,15472,ALDH1A2,isa,FPLX,000024,ALDH +HGNC,409,ALDH1A3,isa,FPLX,000024,ALDH +HGNC,404,ALDH2,isa,FPLX,000024,ALDH +HGNC,405,ALDH3A1,isa,FPLX,000024,ALDH +HGNC,403,ALDH3A2,isa,FPLX,000024,ALDH +HGNC,410,ALDH3B1,isa,FPLX,000024,ALDH +HGNC,408,ALDH5A1,isa,FPLX,000024,ALDH +HGNC,877,ALDH7A1,isa,FPLX,000024,ALDH +HGNC,412,ALDH9A1,isa,FPLX,000024,ALDH +HGNC,414,ALDOA,isa,FPLX,000025,ALDO +HGNC,417,ALDOB,isa,FPLX,000025,ALDO +HGNC,418,ALDOC,isa,FPLX,000025,ALDO +HGNC,600,APOA1,isa,FPLX,000051,APOA +HGNC,601,APOA2,isa,FPLX,000051,APOA +HGNC,602,APOA4,isa,FPLX,000051,APOA +HGNC,17288,APOA5,isa,FPLX,000051,APOA +FPLX,000051,APOA,isa,FPLX,000052,Apolipoprotein +HGNC,613,APOE,isa,FPLX,000052,Apolipoprotein +HGNC,711,ARRB1,isa,FPLX,000055,ARRB +HGNC,712,ARRB2,isa,FPLX,000055,ARRB +HGNC,16489,ATG4A,isa,FPLX,000056,ATG4 +HGNC,20790,ATG4B,isa,FPLX,000056,ATG4 +HGNC,16040,ATG4C,isa,FPLX,000056,ATG4 +HGNC,20789,ATG4D,isa,FPLX,000056,ATG4 +HGNC,903,AXIN1,isa,FPLX,000062,AXIN +HGNC,904,AXIN2,isa,FPLX,000062,AXIN +HGNC,590,BIRC2,isa,FPLX,000066,BIRC +HGNC,591,BIRC3,isa,FPLX,000066,BIRC +HGNC,593,BIRC5,isa,FPLX,000066,BIRC +HGNC,13516,BIRC6,isa,FPLX,000066,BIRC +HGNC,13702,BIRC7,isa,FPLX,000066,BIRC +HGNC,14878,BIRC8,isa,FPLX,000066,BIRC +HGNC,7634,NAIP,isa,FPLX,000066,BIRC +HGNC,592,XIAP,isa,FPLX,000066,BIRC +HGNC,4214,GDF1,isa,FPLX,000067,BMP +HGNC,4217,GDF2,isa,FPLX,000067,BMP +HGNC,4218,GDF3,isa,FPLX,000067,BMP +HGNC,4220,GDF5,isa,FPLX,000067,BMP +HGNC,4221,GDF6,isa,FPLX,000067,BMP +HGNC,4222,GDF7,isa,FPLX,000067,BMP +FPLX,000069,BMP_receptor_type_I,isa,FPLX,000068,BMP_receptor +FPLX,000070,BMP_receptor_type_II,isa,FPLX,000068,BMP_receptor +HGNC,171,ACVR1,isa,FPLX,000069,BMP_receptor_type_I +HGNC,1076,BMPR1A,isa,FPLX,000069,BMP_receptor_type_I +HGNC,1077,BMPR1B,isa,FPLX,000069,BMP_receptor_type_I +HGNC,173,ACVR2A,isa,FPLX,000070,BMP_receptor_type_II +HGNC,174,ACVR2B,isa,FPLX,000070,BMP_receptor_type_II +HGNC,1078,BMPR2,isa,FPLX,000070,BMP_receptor_type_II +HGNC,1442,CALM1,isa,FPLX,000075,CALM +HGNC,1445,CALM2,isa,FPLX,000075,CALM +HGNC,1449,CALM3,isa,FPLX,000075,CALM +HGNC,1459,CAMK1,isa,FPLX,000076,CAMK +HGNC,19341,CAMK1D,isa,FPLX,000076,CAMK +HGNC,14585,CAMK1G,isa,FPLX,000076,CAMK +HGNC,1460,CAMK2A,isa,FPLX,000078,CAMK2_family +HGNC,1461,CAMK2B,isa,FPLX,000078,CAMK2_family +HGNC,1462,CAMK2D,isa,FPLX,000078,CAMK2_family +HGNC,1463,CAMK2G,isa,FPLX,000078,CAMK2_family +HGNC,1464,CAMK4,isa,FPLX,000076,CAMK +FPLX,000078,CAMK2_family,isa,FPLX,000076,CAMK +HGNC,1476,CAPN1,isa,FPLX,000079,CAPN +HGNC,1477,CAPN10,isa,FPLX,000079,CAPN +HGNC,1478,CAPN11,isa,FPLX,000079,CAPN +HGNC,13249,CAPN12,isa,FPLX,000079,CAPN +HGNC,16663,CAPN13,isa,FPLX,000079,CAPN +HGNC,16664,CAPN14,isa,FPLX,000079,CAPN +HGNC,1479,CAPN2,isa,FPLX,000079,CAPN +HGNC,1480,CAPN3,isa,FPLX,000079,CAPN +HGNC,1482,CAPN5,isa,FPLX,000079,CAPN +HGNC,1483,CAPN6,isa,FPLX,000079,CAPN +HGNC,1484,CAPN7,isa,FPLX,000079,CAPN +HGNC,1486,CAPN9,isa,FPLX,000079,CAPN +HGNC,11182,CAPN15,isa,FPLX,000079,CAPN +HGNC,1485,CAPN8,isa,FPLX,000079,CAPN +HGNC,1863,CES1,isa,FPLX,000080,Carboxylesterase +HGNC,1864,CES2,isa,FPLX,000080,Carboxylesterase +HGNC,1865,CES3,isa,FPLX,000080,Carboxylesterase +HGNC,26741,CES4A,isa,FPLX,000080,Carboxylesterase +HGNC,26459,CES5A,isa,FPLX,000080,Carboxylesterase +HGNC,1527,CAV1,isa,FPLX,000083,CAV +HGNC,1528,CAV2,isa,FPLX,000083,CAV +HGNC,1529,CAV3,isa,FPLX,000083,CAV +HGNC,3619,FCGR3A,isa,FPLX,000086,CD16 +HGNC,3620,FCGR3B,isa,FPLX,000086,CD16 +HGNC,3616,FCGR2A,isa,FPLX,000088,CD32 +HGNC,3618,FCGR2B,isa,FPLX,000088,CD32 +HGNC,15626,FCGR2C,isa,FPLX,000088,CD32 +HGNC,3613,FCGR1A,isa,FPLX,000089,CD64 +HGNC,3614,FCGR1B,isa,FPLX,000089,CD64 +HGNC,1725,CDC25A,isa,FPLX,000091,CDC25 +HGNC,1726,CDC25B,isa,FPLX,000091,CDC25 +HGNC,1727,CDC25C,isa,FPLX,000091,CDC25 +HGNC,1748,CDH1,isa,FPLX,000074,Cadherin +HGNC,1749,CDH10,isa,FPLX,000074,Cadherin +HGNC,1750,CDH11,isa,FPLX,000074,Cadherin +HGNC,1751,CDH12,isa,FPLX,000074,Cadherin +HGNC,1753,CDH13,isa,FPLX,000074,Cadherin +HGNC,1754,CDH15,isa,FPLX,000074,Cadherin +HGNC,1755,CDH16,isa,FPLX,000074,Cadherin +HGNC,1756,CDH17,isa,FPLX,000074,Cadherin +HGNC,1757,CDH18,isa,FPLX,000074,Cadherin +HGNC,1758,CDH19,isa,FPLX,000074,Cadherin +HGNC,1759,CDH2,isa,FPLX,000074,Cadherin +HGNC,1760,CDH20,isa,FPLX,000074,Cadherin +HGNC,13251,CDH22,isa,FPLX,000074,Cadherin +HGNC,14265,CDH24,isa,FPLX,000074,Cadherin +HGNC,1762,CDH3,isa,FPLX,000074,Cadherin +HGNC,1763,CDH4,isa,FPLX,000074,Cadherin +HGNC,1764,CDH5,isa,FPLX,000074,Cadherin +HGNC,1765,CDH6,isa,FPLX,000074,Cadherin +HGNC,1766,CDH7,isa,FPLX,000074,Cadherin +HGNC,1767,CDH8,isa,FPLX,000074,Cadherin +HGNC,1768,CDH9,isa,FPLX,000074,Cadherin +HGNC,1833,CEBPA,isa,FPLX,000097,CEBP +HGNC,1834,CEBPB,isa,FPLX,000097,CEBP +HGNC,1835,CEBPD,isa,FPLX,000097,CEBP +HGNC,1837,CEBPG,isa,FPLX,000097,CEBP +HGNC,1836,CEBPE,isa,FPLX,000097,CEBP +HGNC,1565,ACKR2,isa,FPLX,000100,Chemokine_receptor +HGNC,1602,CCR1,isa,FPLX,000100,Chemokine_receptor +HGNC,4474,CCR10,isa,FPLX,000100,Chemokine_receptor +HGNC,1603,CCR2,isa,FPLX,000100,Chemokine_receptor +HGNC,1604,CCR3,isa,FPLX,000100,Chemokine_receptor +HGNC,1605,CCR4,isa,FPLX,000100,Chemokine_receptor +HGNC,1606,CCR5,isa,FPLX,000100,Chemokine_receptor +HGNC,1607,CCR6,isa,FPLX,000100,Chemokine_receptor +HGNC,1608,CCR7,isa,FPLX,000100,Chemokine_receptor +HGNC,1609,CCR8,isa,FPLX,000100,Chemokine_receptor +HGNC,1610,CCR9,isa,FPLX,000100,Chemokine_receptor +HGNC,1611,ACKR4,isa,FPLX,000100,Chemokine_receptor +HGNC,1612,CCRL2,isa,FPLX,000100,Chemokine_receptor +HGNC,2558,CX3CR1,isa,FPLX,000100,Chemokine_receptor +HGNC,6026,CXCR1,isa,FPLX,000100,Chemokine_receptor +HGNC,6027,CXCR2,isa,FPLX,000100,Chemokine_receptor +HGNC,4540,CXCR3,isa,FPLX,000100,Chemokine_receptor +HGNC,2561,CXCR4,isa,FPLX,000100,Chemokine_receptor +HGNC,1060,CXCR5,isa,FPLX,000100,Chemokine_receptor +HGNC,16647,CXCR6,isa,FPLX,000100,Chemokine_receptor +HGNC,23692,ACKR3,isa,FPLX,000100,Chemokine_receptor +HGNC,1625,XCR1,isa,FPLX,000100,Chemokine_receptor +HGNC,108,ACHE,isa,FPLX,000101,Cholinesterase +HGNC,983,BCHE,isa,FPLX,000101,Cholinesterase +HGNC,1950,CHRM1,isa,FPLX,000102,CHRM +HGNC,1951,CHRM2,isa,FPLX,000102,CHRM +HGNC,1952,CHRM3,isa,FPLX,000102,CHRM +HGNC,1953,CHRM4,isa,FPLX,000102,CHRM +HGNC,1954,CHRM5,isa,FPLX,000102,CHRM +HGNC,2197,COL1A1,isa,FPLX,000109,COL1 +HGNC,2198,COL1A2,isa,FPLX,000109,COL1 +HGNC,2202,COL4A1,isa,FPLX,000110,COL4 +HGNC,2203,COL4A2,isa,FPLX,000110,COL4 +HGNC,2204,COL4A3,isa,FPLX,000110,COL4 +HGNC,2206,COL4A4,isa,FPLX,000110,COL4 +HGNC,2207,COL4A5,isa,FPLX,000110,COL4 +HGNC,2208,COL4A6,isa,FPLX,000110,COL4 +HGNC,2209,COL5A1,isa,FPLX,000111,COL5 +HGNC,2210,COL5A2,isa,FPLX,000111,COL5 +HGNC,14864,COL5A3,isa,FPLX,000111,COL5 +HGNC,2265,COX4I1,isa,FPLX,000114,COX4 +HGNC,16232,COX4I2,isa,FPLX,000114,COX4 +HGNC,2277,COX6A1,isa,FPLX,000115,COX6A +HGNC,2279,COX6A2,isa,FPLX,000115,COX6A +HGNC,2280,COX6B1,isa,FPLX,000116,COX6B +HGNC,24380,COX6B2,isa,FPLX,000116,COX6B +HGNC,2287,COX7A1,isa,FPLX,000117,COX7A +HGNC,2288,COX7A2,isa,FPLX,000117,COX7A +HGNC,2291,COX7B,isa,FPLX,000118,COX7B +HGNC,24381,COX7B2,isa,FPLX,000118,COX7B +HGNC,2294,COX8A,isa,FPLX,000119,COX8 +HGNC,24382,COX8C,isa,FPLX,000119,COX8 +HGNC,2267,COX5A,partof,FPLX,000113,COX +HGNC,2269,COX5B,partof,FPLX,000113,COX +FPLX,000114,COX4,partof,FPLX,000113,COX +FPLX,000115,COX6A,partof,FPLX,000113,COX +FPLX,000116,COX6B,partof,FPLX,000113,COX +FPLX,000117,COX7A,partof,FPLX,000113,COX +FPLX,000118,COX7B,partof,FPLX,000113,COX 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+HGNC,571,AP3S2,partof,FPLX,000016,Adaptor_protein_III +HGNC,537,ANXA2,partof,FPLX,000047,Annexin_II_heterotetramer +HGNC,10487,S100A10,partof,FPLX,000047,Annexin_II_heterotetramer +HGNC,703,ARPC1A,partof,FPLX,000054,Arp2_3_protein +HGNC,704,ARPC1B,partof,FPLX,000054,Arp2_3_protein +HGNC,705,ARPC2,partof,FPLX,000054,Arp2_3_protein +HGNC,706,ARPC3,partof,FPLX,000054,Arp2_3_protein +HGNC,707,ARPC4,partof,FPLX,000054,Arp2_3_protein +HGNC,708,ARPC5,partof,FPLX,000054,Arp2_3_protein +HGNC,23366,ARPC5L,partof,FPLX,000054,Arp2_3_protein +HGNC,986,BCKDHA,partof,FPLX,000064,BCKDC +HGNC,987,BCKDHB,partof,FPLX,000064,BCKDC +HGNC,2698,DBT,partof,FPLX,000064,BCKDC +HGNC,2898,DLD,partof,FPLX,000064,BCKDC +HGNC,1241,C1QA,partof,FPLX,000072,C1 +HGNC,1242,C1QB,partof,FPLX,000072,C1 +HGNC,1245,C1QC,partof,FPLX,000072,C1 +HGNC,1246,C1R,partof,FPLX,000072,C1 +HGNC,1247,C1S,partof,FPLX,000072,C1 +HGNC,1241,C1QA,partof,FPLX,000073,C1q +HGNC,1242,C1QB,partof,FPLX,000073,C1q +HGNC,1460,CAMK2A,partof,FPLX,000077,CAMK2_complex +HGNC,1461,CAMK2B,partof,FPLX,000077,CAMK2_complex +HGNC,1462,CAMK2D,partof,FPLX,000077,CAMK2_complex +HGNC,1463,CAMK2G,partof,FPLX,000077,CAMK2_complex +HGNC,10899,SKP1,partof,FPLX,000084,CBF3 +HGNC,1615,CCT2,partof,FPLX,000085,CCT_complex +HGNC,1616,CCT3,partof,FPLX,000085,CCT_complex +HGNC,1617,CCT4,partof,FPLX,000085,CCT_complex +HGNC,1618,CCT5,partof,FPLX,000085,CCT_complex +HGNC,1620,CCT6A,partof,FPLX,000085,CCT_complex +HGNC,1621,CCT6B,partof,FPLX,000085,CCT_complex +HGNC,1622,CCT7,partof,FPLX,000085,CCT_complex +HGNC,1623,CCT8,partof,FPLX,000085,CCT_complex +HGNC,11655,TCP1,partof,FPLX,000085,CCT_complex +HGNC,1677,CD247,partof,FPLX,000087,CD3 +HGNC,1673,CD3D,partof,FPLX,000087,CD3 +HGNC,1674,CD3E,partof,FPLX,000087,CD3 +HGNC,1675,CD3G,partof,FPLX,000087,CD3 +HGNC,1956,CHRNA2,partof,FPLX,000103,CHRN +HGNC,1957,CHRNA3,partof,FPLX,000103,CHRN +HGNC,1958,CHRNA4,partof,FPLX,000103,CHRN +HGNC,1959,CHRNA5,partof,FPLX,000103,CHRN +HGNC,15963,CHRNA6,partof,FPLX,000103,CHRN +HGNC,1960,CHRNA7,partof,FPLX,000103,CHRN +HGNC,1962,CHRNB2,partof,FPLX,000103,CHRN +HGNC,1963,CHRNB3,partof,FPLX,000103,CHRN +HGNC,1964,CHRNB4,partof,FPLX,000103,CHRN +HGNC,2090,CLTA,partof,FPLX,000105,Clathrin +HGNC,2091,CLTB,partof,FPLX,000105,Clathrin +HGNC,2092,CLTC,partof,FPLX,000105,Clathrin +HGNC,9811,RAD21,partof,FPLX,000108,Cohesin +HGNC,2468,SMC3,partof,FPLX,000108,Cohesin +HGNC,9234,MED1,partof,FPLX,000122,CRSP +HGNC,2370,MED14,partof,FPLX,000122,CRSP +HGNC,2375,MED17,partof,FPLX,000122,CRSP +HGNC,2372,MED23,partof,FPLX,000122,CRSP +HGNC,2376,MED26,partof,FPLX,000122,CRSP +HGNC,2377,MED27,partof,FPLX,000122,CRSP +HGNC,2378,MED7,partof,FPLX,000122,CRSP +HGNC,2961,DYNC1H1,partof,FPLX,000135,Cytoplasmic_dynein +HGNC,2963,DYNC1I1,partof,FPLX,000135,Cytoplasmic_dynein +HGNC,2964,DYNC1I2,partof,FPLX,000135,Cytoplasmic_dynein +HGNC,18745,DYNC1LI1,partof,FPLX,000135,Cytoplasmic_dynein +HGNC,2966,DYNC1LI2,partof,FPLX,000135,Cytoplasmic_dynein +HGNC,15476,DYNLL1,partof,FPLX,000135,Cytoplasmic_dynein +HGNC,15468,DYNLRB1,partof,FPLX,000135,Cytoplasmic_dynein +HGNC,15467,DYNLRB2,partof,FPLX,000135,Cytoplasmic_dynein +HGNC,9175,POLD1,partof,FPLX,000141,DNA_polymerase_delta +HGNC,9176,POLD2,partof,FPLX,000141,DNA_polymerase_delta +HGNC,20932,POLD3,partof,FPLX,000141,DNA_polymerase_delta +HGNC,14106,POLD4,partof,FPLX,000141,DNA_polymerase_delta +HGNC,2666,DAG1,partof,FPLX,000139,DGC +HGNC,2928,DMD,partof,FPLX,000139,DGC +HGNC,3057,DTNA,partof,FPLX,000139,DGC +HGNC,3058,DTNB,partof,FPLX,000139,DGC +HGNC,7872,NOS1,partof,FPLX,000139,DGC +HGNC,10805,SGCA,partof,FPLX,000139,DGC +HGNC,10806,SGCB,partof,FPLX,000139,DGC +HGNC,10807,SGCD,partof,FPLX,000139,DGC +HGNC,10808,SGCE,partof,FPLX,000139,DGC +HGNC,14075,SGCZ,partof,FPLX,000139,DGC +HGNC,11167,SNTA1,partof,FPLX,000139,DGC +HGNC,11168,SNTB1,partof,FPLX,000139,DGC +HGNC,13740,SNTG1,partof,FPLX,000139,DGC +HGNC,13741,SNTG2,partof,FPLX,000139,DGC +HGNC,11322,SSPN,partof,FPLX,000139,DGC +HGNC,12635,UTRN,partof,FPLX,000139,DGC +HGNC,3257,EIF2B1,partof,FPLX,000152,EIF2B +HGNC,3258,EIF2B2,partof,FPLX,000152,EIF2B +HGNC,3259,EIF2B3,partof,FPLX,000152,EIF2B +HGNC,3260,EIF2B4,partof,FPLX,000152,EIF2B +HGNC,3261,EIF2B5,partof,FPLX,000152,EIF2B +HGNC,3661,FGA,partof,FPLX,000169,Fibrinogen +HGNC,3662,FGB,partof,FPLX,000169,Fibrinogen +HGNC,3694,FGG,partof,FPLX,000169,Fibrinogen +HGNC,1885,CGA,partof,FPLX,000175,FSH +HGNC,3964,FSHB,partof,FPLX,000175,FSH +HGNC,29509,APH1A,partof,FPLX,000181,Gamma_secretase +HGNC,9508,PSEN1,partof,FPLX,000181,Gamma_secretase +HGNC,30100,PSENEN,partof,FPLX,000181,Gamma_secretase +HGNC,4446,GPAA1,partof,FPLX,000189,GPIT +HGNC,8965,PIGK,partof,FPLX,000189,GPIT +HGNC,14937,PIGS,partof,FPLX,000189,GPIT +HGNC,14938,PIGT,partof,FPLX,000189,GPIT +HGNC,15791,PIGU,partof,FPLX,000189,GPIT +HGNC,4650,GTF2E1,partof,FPLX,000196,GTF2E +HGNC,4651,GTF2E2,partof,FPLX,000196,GTF2E +HGNC,4652,GTF2F1,partof,FPLX,000197,GTF2F +HGNC,4653,GTF2F2,partof,FPLX,000197,GTF2F +HGNC,399,ALB,partof,FPLX,000225,HDL +HGNC,600,APOA1,partof,FPLX,000225,HDL +HGNC,601,APOA2,partof,FPLX,000225,HDL +HGNC,613,APOE,partof,FPLX,000225,HDL +HGNC,2095,CLU,partof,FPLX,000225,HDL +HGNC,4823,HBA1,partof,FPLX,000227,Hemoglobin +HGNC,4824,HBA2,partof,FPLX,000227,Hemoglobin +HGNC,4827,HBB,partof,FPLX,000227,Hemoglobin +HGNC,4829,HBD,partof,FPLX,000227,Hemoglobin +HGNC,4830,HBE1,partof,FPLX,000227,Hemoglobin +HGNC,4831,HBG1,partof,FPLX,000227,Hemoglobin +HGNC,4832,HBG2,partof,FPLX,000227,Hemoglobin +HGNC,4826,HBM,partof,FPLX,000227,Hemoglobin +HGNC,4833,HBQ1,partof,FPLX,000227,Hemoglobin +HGNC,4835,HBZ,partof,FPLX,000227,Hemoglobin +HGNC,4439,GP1BA,partof,FPLX,000188,GPIb_IX_V +HGNC,4440,GP1BB,partof,FPLX,000188,GPIb_IX_V +HGNC,4443,GP5,partof,FPLX,000188,GPIb_IX_V +HGNC,4444,GP9,partof,FPLX,000188,GPIb_IX_V +HGNC,1974,CHUK,partof,FPLX,000250,IKK_complex +HGNC,5960,IKBKB,partof,FPLX,000250,IKK_complex +HGNC,5961,IKBKG,partof,FPLX,000250,IKK_complex +HGNC,5439,IFNGR1,partof,FPLX,000263,Interferon_gamma_receptor +HGNC,5440,IFNGR2,partof,FPLX,000263,Interferon_gamma_receptor +HGNC,1148,BUB1,partof,FPLX,000270,Kinetochore +HGNC,1149,BUB1B,partof,FPLX,000270,Kinetochore +HGNC,1151,BUB3,partof,FPLX,000270,Kinetochore +HGNC,1854,CENPC,partof,FPLX,000270,Kinetochore +HGNC,1856,CENPE,partof,FPLX,000270,Kinetochore +HGNC,1857,CENPF,partof,FPLX,000270,Kinetochore +HGNC,17268,CENPH,partof,FPLX,000270,Kinetochore +HGNC,2712,DCTN2,partof,FPLX,000270,Kinetochore +HGNC,6391,KIF22,partof,FPLX,000270,Kinetochore +HGNC,6763,MAD2L1,partof,FPLX,000270,Kinetochore +HGNC,8574,PAFAH1B1,partof,FPLX,000270,Kinetochore +HGNC,9508,PSEN1,partof,FPLX,000270,Kinetochore +HGNC,9509,PSEN2,partof,FPLX,000270,Kinetochore +HGNC,11111,SMC1A,partof,FPLX,000270,Kinetochore +HGNC,16987,SUGT1,partof,FPLX,000270,Kinetochore +HGNC,11124,SUMO3,partof,FPLX,000270,Kinetochore +HGNC,13194,ZW10,partof,FPLX,000270,Kinetochore +HGNC,6481,LAMA1,partof,FPLX,000273,Laminin_111 +HGNC,6486,LAMB1,partof,FPLX,000273,Laminin_111 +HGNC,6492,LAMC1,partof,FPLX,000273,Laminin_111 +HGNC,6483,LAMA3,partof,FPLX,000274,Laminin_332 +HGNC,6490,LAMB3,partof,FPLX,000274,Laminin_332 +HGNC,6493,LAMC2,partof,FPLX,000274,Laminin_332 +HGNC,1885,CGA,partof,FPLX,000276,LH +HGNC,6584,LHB,partof,FPLX,000276,LH +HGNC,1331,C5,partof,FPLX,000278,MAC +HGNC,1339,C6,partof,FPLX,000278,MAC +HGNC,1346,C7,partof,FPLX,000278,MAC +HGNC,1352,C8A,partof,FPLX,000278,MAC +HGNC,1353,C8B,partof,FPLX,000278,MAC +HGNC,1354,C8G,partof,FPLX,000278,MAC +HGNC,1358,C9,partof,FPLX,000278,MAC +HGNC,799,ATP1A1,isa,FPLX,000057,ATP1A +HGNC,800,ATP1A2,isa,FPLX,000057,ATP1A +HGNC,801,ATP1A3,isa,FPLX,000057,ATP1A +HGNC,14073,ATP1A4,isa,FPLX,000057,ATP1A +HGNC,804,ATP1B1,isa,FPLX,000058,ATP1B +HGNC,805,ATP1B2,isa,FPLX,000058,ATP1B +HGNC,806,ATP1B3,isa,FPLX,000058,ATP1B +HGNC,808,ATP1B4,isa,FPLX,000058,ATP1B +FPLX,000057,ATP1A,partof,FPLX,000303,Na_K_ATPase +FPLX,000058,ATP1B,partof,FPLX,000303,Na_K_ATPase +HGNC,7455,MT-ND1,partof,FPLX,000301,NADH_dehydrogenase +HGNC,7456,MT-ND2,partof,FPLX,000301,NADH_dehydrogenase +HGNC,7458,MT-ND3,partof,FPLX,000301,NADH_dehydrogenase +HGNC,7459,MT-ND4,partof,FPLX,000301,NADH_dehydrogenase +HGNC,7460,MT-ND4L,partof,FPLX,000301,NADH_dehydrogenase +HGNC,7461,MT-ND5,partof,FPLX,000301,NADH_dehydrogenase +HGNC,7462,MT-ND6,partof,FPLX,000301,NADH_dehydrogenase +HGNC,2577,CYBA,partof,FPLX,000302,NADPH_oxidase +HGNC,2578,CYBB,partof,FPLX,000302,NADPH_oxidase +HGNC,3062,DUOX1,partof,FPLX,000302,NADPH_oxidase +HGNC,13273,DUOX2,partof,FPLX,000302,NADPH_oxidase +HGNC,7660,NCF1,partof,FPLX,000302,NADPH_oxidase +HGNC,7661,NCF2,partof,FPLX,000302,NADPH_oxidase +HGNC,7662,NCF4,partof,FPLX,000302,NADPH_oxidase +HGNC,7889,NOX1,partof,FPLX,000302,NADPH_oxidase +HGNC,7890,NOX3,partof,FPLX,000302,NADPH_oxidase +HGNC,7891,NOX4,partof,FPLX,000302,NADPH_oxidase +HGNC,14874,NOX5,partof,FPLX,000302,NADPH_oxidase +HGNC,9801,RAC1,partof,FPLX,000302,NADPH_oxidase +HGNC,7804,NFYA,partof,FPLX,000314,NFY +HGNC,7805,NFYB,partof,FPLX,000314,NFY +HGNC,7806,NFYC,partof,FPLX,000314,NFY +HGNC,1442,CALM1,partof,FPLX,000356,PhK +HGNC,8925,PHKA1,partof,FPLX,000356,PhK +HGNC,8926,PHKA2,partof,FPLX,000356,PhK +HGNC,8927,PHKB,partof,FPLX,000356,PhK +HGNC,8930,PHKG1,partof,FPLX,000356,PhK +HGNC,8931,PHKG2,partof,FPLX,000356,PhK +HGNC,1066,BMI1,partof,FPLX,000386,PRC1_complex +HGNC,1552,CBX2,partof,FPLX,000386,PRC1_complex +HGNC,1554,CBX4,partof,FPLX,000386,PRC1_complex +HGNC,15962,CBX8,partof,FPLX,000386,PRC1_complex +HGNC,12929,PCGF2,partof,FPLX,000386,PRC1_complex +HGNC,3182,PHC1,partof,FPLX,000386,PRC1_complex +HGNC,3183,PHC2,partof,FPLX,000386,PRC1_complex +HGNC,15682,PHC3,partof,FPLX,000386,PRC1_complex +HGNC,8919,PHF1,partof,FPLX,000386,PRC1_complex +HGNC,10018,RING1,partof,FPLX,000386,PRC1_complex +HGNC,10061,RNF2,partof,FPLX,000386,PRC1_complex +HGNC,19003,SCMH1,partof,FPLX,000386,PRC1_complex +HGNC,12856,YY1,partof,FPLX,000386,PRC1_complex +HGNC,12918,ZNF134,partof,FPLX,000386,PRC1_complex +HGNC,3188,EED,partof,FPLX,000387,PRC2_complex +HGNC,3526,EZH1,partof,FPLX,000387,PRC2_complex +HGNC,3527,EZH2,partof,FPLX,000387,PRC2_complex +HGNC,17101,SUZ12,partof,FPLX,000387,PRC2_complex +HGNC,8653,PCCA,partof,FPLX,000392,Propionyl_CoA_carboxylase +HGNC,8654,PCCB,partof,FPLX,000392,Propionyl_CoA_carboxylase +HGNC,9530,PSMA1,partof,FPLX,000394,Proteasome +HGNC,9531,PSMA2,partof,FPLX,000394,Proteasome +HGNC,9532,PSMA3,partof,FPLX,000394,Proteasome +HGNC,9533,PSMA4,partof,FPLX,000394,Proteasome +HGNC,9534,PSMA5,partof,FPLX,000394,Proteasome +HGNC,9535,PSMA6,partof,FPLX,000394,Proteasome +HGNC,9536,PSMA7,partof,FPLX,000394,Proteasome +HGNC,22985,PSMA8,partof,FPLX,000394,Proteasome +HGNC,9537,PSMB1,partof,FPLX,000394,Proteasome +HGNC,9538,PSMB10,partof,FPLX,000394,Proteasome +HGNC,9539,PSMB2,partof,FPLX,000394,Proteasome +HGNC,9540,PSMB3,partof,FPLX,000394,Proteasome +HGNC,9541,PSMB4,partof,FPLX,000394,Proteasome +HGNC,9542,PSMB5,partof,FPLX,000394,Proteasome +HGNC,9543,PSMB6,partof,FPLX,000394,Proteasome +HGNC,9544,PSMB7,partof,FPLX,000394,Proteasome +HGNC,9545,PSMB8,partof,FPLX,000394,Proteasome +HGNC,9546,PSMB9,partof,FPLX,000394,Proteasome +HGNC,9547,PSMC1,partof,FPLX,000394,Proteasome +HGNC,9548,PSMC2,partof,FPLX,000394,Proteasome +HGNC,9549,PSMC3,partof,FPLX,000394,Proteasome +HGNC,9551,PSMC4,partof,FPLX,000394,Proteasome +HGNC,9552,PSMC5,partof,FPLX,000394,Proteasome +HGNC,9553,PSMC6,partof,FPLX,000394,Proteasome +HGNC,9554,PSMD1,partof,FPLX,000394,Proteasome +HGNC,9555,PSMD10,partof,FPLX,000394,Proteasome +HGNC,9556,PSMD11,partof,FPLX,000394,Proteasome +HGNC,9557,PSMD12,partof,FPLX,000394,Proteasome +HGNC,9558,PSMD13,partof,FPLX,000394,Proteasome +HGNC,16889,PSMD14,partof,FPLX,000394,Proteasome +HGNC,9559,PSMD2,partof,FPLX,000394,Proteasome +HGNC,9560,PSMD3,partof,FPLX,000394,Proteasome +HGNC,9561,PSMD4,partof,FPLX,000394,Proteasome +HGNC,9563,PSMD5,partof,FPLX,000394,Proteasome +HGNC,9564,PSMD6,partof,FPLX,000394,Proteasome +HGNC,9565,PSMD7,partof,FPLX,000394,Proteasome +HGNC,9566,PSMD8,partof,FPLX,000394,Proteasome +HGNC,9567,PSMD9,partof,FPLX,000394,Proteasome +HGNC,9568,PSME1,partof,FPLX,000394,Proteasome +HGNC,9569,PSME2,partof,FPLX,000394,Proteasome +HGNC,9570,PSME3,partof,FPLX,000394,Proteasome +HGNC,9571,PSMF1,partof,FPLX,000394,Proteasome +HGNC,10845,SEM1,partof,FPLX,000394,Proteasome +HGNC,12628,USP5,partof,FPLX,000394,Proteasome +HGNC,2896,DLAT,partof,FPLX,000352,PDH +HGNC,2898,DLD,partof,FPLX,000352,PDH +HGNC,8806,PDHA1,partof,FPLX,000352,PDH +HGNC,8807,PDHA2,partof,FPLX,000352,PDH +HGNC,8808,PDHB,partof,FPLX,000352,PDH +HGNC,21350,PDHX,partof,FPLX,000352,PDH +HGNC,9969,RFC1,partof,FPLX,000411,RFC +HGNC,9970,RFC2,partof,FPLX,000411,RFC +HGNC,9971,RFC3,partof,FPLX,000411,RFC +HGNC,9972,RFC4,partof,FPLX,000411,RFC +HGNC,9973,RFC5,partof,FPLX,000411,RFC +HGNC,17264,POLR1A,partof,FPLX,000416,RNApo_I +HGNC,20454,POLR1B,partof,FPLX,000416,RNApo_I +HGNC,20194,POLR1C,partof,FPLX,000416,RNApo_I +HGNC,20422,POLR1D,partof,FPLX,000416,RNApo_I +HGNC,9187,POLR2A,partof,FPLX,000417,RNApo_II +HGNC,9188,POLR2B,partof,FPLX,000417,RNApo_II +HGNC,9189,POLR2C,partof,FPLX,000417,RNApo_II +HGNC,9191,POLR2D,partof,FPLX,000417,RNApo_II +HGNC,9192,POLR2E,partof,FPLX,000417,RNApo_II +HGNC,9193,POLR2F,partof,FPLX,000417,RNApo_II +HGNC,9194,POLR2G,partof,FPLX,000417,RNApo_II +HGNC,9195,POLR2H,partof,FPLX,000417,RNApo_II +HGNC,9196,POLR2I,partof,FPLX,000417,RNApo_II +HGNC,9197,POLR2J,partof,FPLX,000417,RNApo_II +HGNC,23208,POLR2J2,partof,FPLX,000417,RNApo_II +HGNC,9198,POLR2K,partof,FPLX,000417,RNApo_II +HGNC,9199,POLR2L,partof,FPLX,000417,RNApo_II +HGNC,3535,F2,partof,FPLX,000469,Thrombin_antithrombin +HGNC,775,SERPINC1,partof,FPLX,000469,Thrombin_antithrombin +HGNC,11532,TAF1A,partof,FPLX,000471,TIF_IB +HGNC,11533,TAF1B,partof,FPLX,000471,TIF_IB +HGNC,11534,TAF1C,partof,FPLX,000471,TIF_IB +HGNC,11588,TBP,partof,FPLX,000471,TIF_IB +HGNC,18752,MAPKAP1,partof,FPLX,000294,mTORC2 +HGNC,3942,MTOR,partof,FPLX,000294,mTORC2 +HGNC,28611,RICTOR,partof,FPLX,000294,mTORC2 +HGNC,24825,MLST8,partof,FPLX,000294,mTORC2 +HGNC,3942,MTOR,partof,FPLX,000293,mTORC1 +HGNC,30287,RPTOR,partof,FPLX,000293,mTORC1 +HGNC,11998,TP53,isa,FPLX,000327,p53_family +HGNC,15979,TP63,isa,FPLX,000327,p53_family +HGNC,12003,TP73,isa,FPLX,000327,p53_family +HGNC,9585,PTCH1,isa,FPLX,000333,Patched +HGNC,9586,PTCH2,isa,FPLX,000333,Patched +HGNC,11943,TNNC1,isa,FPLX,000478,Troponin_C +HGNC,11944,TNNC2,isa,FPLX,000478,Troponin_C +HGNC,11945,TNNI1,isa,FPLX,000479,Troponin_I +HGNC,11946,TNNI2,isa,FPLX,000479,Troponin_I +HGNC,11947,TNNI3,isa,FPLX,000479,Troponin_I +HGNC,11948,TNNT1,isa,FPLX,000480,Troponin_T +HGNC,11949,TNNT2,isa,FPLX,000480,Troponin_T +HGNC,11950,TNNT3,isa,FPLX,000480,Troponin_T +FPLX,000478,Troponin_C,partof,FPLX,000477,Troponin 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+HGNC,6009,IL2RB,partof,FPLX,000254,IL15R +HGNC,6010,IL2RG,partof,FPLX,000254,IL15R +HGNC,14275,MRPL1,partof,FPLX,000290,MRPL +HGNC,14056,MRPL2,partof,FPLX,000290,MRPL +HGNC,10379,MRPL3,partof,FPLX,000290,MRPL +HGNC,14276,MRPL4,partof,FPLX,000290,MRPL +HGNC,14277,MRPL9,partof,FPLX,000290,MRPL +HGNC,14055,MRPL10,partof,FPLX,000290,MRPL +HGNC,14042,MRPL11,partof,FPLX,000290,MRPL +HGNC,10378,MRPL12,partof,FPLX,000290,MRPL +HGNC,14278,MRPL13,partof,FPLX,000290,MRPL +HGNC,14279,MRPL14,partof,FPLX,000290,MRPL +HGNC,14054,MRPL15,partof,FPLX,000290,MRPL +HGNC,14476,MRPL16,partof,FPLX,000290,MRPL +HGNC,14053,MRPL17,partof,FPLX,000290,MRPL +HGNC,14477,MRPL18,partof,FPLX,000290,MRPL +HGNC,14052,MRPL19,partof,FPLX,000290,MRPL +HGNC,14478,MRPL20,partof,FPLX,000290,MRPL +HGNC,14479,MRPL21,partof,FPLX,000290,MRPL +HGNC,14480,MRPL22,partof,FPLX,000290,MRPL +HGNC,10322,MRPL23,partof,FPLX,000290,MRPL +HGNC,14037,MRPL24,partof,FPLX,000290,MRPL +HGNC,14483,MRPL27,partof,FPLX,000290,MRPL 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+HGNC,16684,MRPL53,partof,FPLX,000290,MRPL +HGNC,16685,MRPL54,partof,FPLX,000290,MRPL +HGNC,16686,MRPL55,partof,FPLX,000290,MRPL +HGNC,14514,MRPL57,partof,FPLX,000290,MRPL +HGNC,14495,MRPS2,partof,FPLX,000289,MRPS +HGNC,14498,MRPS5,partof,FPLX,000289,MRPS +HGNC,14051,MRPS6,partof,FPLX,000289,MRPS +HGNC,14499,MRPS7,partof,FPLX,000289,MRPS +HGNC,14501,MRPS9,partof,FPLX,000289,MRPS +HGNC,14502,MRPS10,partof,FPLX,000289,MRPS +HGNC,14050,MRPS11,partof,FPLX,000289,MRPS +HGNC,10380,MRPS12,partof,FPLX,000289,MRPS +HGNC,14049,MRPS14,partof,FPLX,000289,MRPS +HGNC,14504,MRPS15,partof,FPLX,000289,MRPS +HGNC,14048,MRPS16,partof,FPLX,000289,MRPS +HGNC,14047,MRPS17,partof,FPLX,000289,MRPS +HGNC,14515,MRPS18A,partof,FPLX,000289,MRPS +HGNC,14516,MRPS18B,partof,FPLX,000289,MRPS +HGNC,16633,MRPS18C,partof,FPLX,000289,MRPS +HGNC,14046,MRPS21,partof,FPLX,000289,MRPS +HGNC,14508,MRPS22,partof,FPLX,000289,MRPS +HGNC,14509,MRPS23,partof,FPLX,000289,MRPS +HGNC,14510,MRPS24,partof,FPLX,000289,MRPS +HGNC,14511,MRPS25,partof,FPLX,000289,MRPS +HGNC,14045,MRPS26,partof,FPLX,000289,MRPS +HGNC,14512,MRPS27,partof,FPLX,000289,MRPS +HGNC,14513,MRPS28,partof,FPLX,000289,MRPS +HGNC,2673,DAP3,partof,FPLX,000289,MRPS +HGNC,8769,MRPS30,partof,FPLX,000289,MRPS +HGNC,16632,MRPS31,partof,FPLX,000289,MRPS +HGNC,16634,MRPS33,partof,FPLX,000289,MRPS +HGNC,16618,MRPS34,partof,FPLX,000289,MRPS +HGNC,16635,MRPS35,partof,FPLX,000289,MRPS +HGNC,16631,MRPS36,partof,FPLX,000289,MRPS +FPLX,000289,MRPS,partof,FPLX,000288,Mitochondrial_Ribosome +FPLX,000290,MRPL,partof,FPLX,000288,Mitochondrial_Ribosome +HGNC,7939,NPPA,isa,FPLX,000304,Natriuretic_peptide +HGNC,7940,NPPB,isa,FPLX,000304,Natriuretic_peptide +HGNC,7941,NPPC,isa,FPLX,000304,Natriuretic_peptide +HGNC,7455,MT-ND1,partof,FPLX,000499,ETC_complex_I_core +HGNC,7456,MT-ND2,partof,FPLX,000499,ETC_complex_I_core +HGNC,7458,MT-ND3,partof,FPLX,000499,ETC_complex_I_core +HGNC,7459,MT-ND4,partof,FPLX,000499,ETC_complex_I_core +HGNC,7460,MT-ND4L,partof,FPLX,000499,ETC_complex_I_core +HGNC,7461,MT-ND5,partof,FPLX,000499,ETC_complex_I_core +HGNC,7462,MT-ND6,partof,FPLX,000499,ETC_complex_I_core +HGNC,7707,NDUFS1,partof,FPLX,000499,ETC_complex_I_core +HGNC,7708,NDUFS2,partof,FPLX,000499,ETC_complex_I_core +HGNC,7710,NDUFS3,partof,FPLX,000499,ETC_complex_I_core +HGNC,7714,NDUFS7,partof,FPLX,000499,ETC_complex_I_core +HGNC,7715,NDUFS8,partof,FPLX,000499,ETC_complex_I_core +HGNC,7716,NDUFV1,partof,FPLX,000499,ETC_complex_I_core +HGNC,7717,NDUFV2,partof,FPLX,000499,ETC_complex_I_core +HGNC,7694,NDUFAB1,partof,FPLX,000500,ETC_complex_I_supernumerary +HGNC,7683,NDUFA1,partof,FPLX,000500,ETC_complex_I_supernumerary +HGNC,7685,NDUFA2,partof,FPLX,000500,ETC_complex_I_supernumerary +HGNC,7686,NDUFA3,partof,FPLX,000500,ETC_complex_I_supernumerary +HGNC,7688,NDUFA5,partof,FPLX,000500,ETC_complex_I_supernumerary +HGNC,7690,NDUFA6,partof,FPLX,000500,ETC_complex_I_supernumerary +HGNC,7691,NDUFA7,partof,FPLX,000500,ETC_complex_I_supernumerary +HGNC,7692,NDUFA8,partof,FPLX,000500,ETC_complex_I_supernumerary +HGNC,7693,NDUFA9,partof,FPLX,000500,ETC_complex_I_supernumerary +HGNC,7684,NDUFA10,partof,FPLX,000500,ETC_complex_I_supernumerary +HGNC,20371,NDUFA11,partof,FPLX,000500,ETC_complex_I_supernumerary +HGNC,23987,NDUFA12,partof,FPLX,000500,ETC_complex_I_supernumerary +HGNC,17194,NDUFA13,partof,FPLX,000500,ETC_complex_I_supernumerary +HGNC,7695,NDUFB1,partof,FPLX,000500,ETC_complex_I_supernumerary +HGNC,7697,NDUFB2,partof,FPLX,000500,ETC_complex_I_supernumerary +HGNC,7698,NDUFB3,partof,FPLX,000500,ETC_complex_I_supernumerary +HGNC,7699,NDUFB4,partof,FPLX,000500,ETC_complex_I_supernumerary +HGNC,7700,NDUFB5,partof,FPLX,000500,ETC_complex_I_supernumerary +HGNC,7701,NDUFB6,partof,FPLX,000500,ETC_complex_I_supernumerary +HGNC,7702,NDUFB7,partof,FPLX,000500,ETC_complex_I_supernumerary +HGNC,7703,NDUFB8,partof,FPLX,000500,ETC_complex_I_supernumerary +HGNC,7704,NDUFB9,partof,FPLX,000500,ETC_complex_I_supernumerary +HGNC,7696,NDUFB10,partof,FPLX,000500,ETC_complex_I_supernumerary +HGNC,20372,NDUFB11,partof,FPLX,000500,ETC_complex_I_supernumerary +HGNC,7705,NDUFC1,partof,FPLX,000500,ETC_complex_I_supernumerary +HGNC,7706,NDUFC2,partof,FPLX,000500,ETC_complex_I_supernumerary +HGNC,7711,NDUFS4,partof,FPLX,000500,ETC_complex_I_supernumerary +HGNC,7712,NDUFS5,partof,FPLX,000500,ETC_complex_I_supernumerary +HGNC,7713,NDUFS6,partof,FPLX,000500,ETC_complex_I_supernumerary +HGNC,7719,NDUFV3,partof,FPLX,000500,ETC_complex_I_supernumerary +FPLX,000499,ETC_complex_I_core,partof,FPLX,000501,ETC_complex_I +FPLX,000500,ETC_complex_I_supernumerary,partof,FPLX,000501,ETC_complex_I +HGNC,10680,SDHA,partof,FPLX,000502,ETC_complex_II +HGNC,10681,SDHB,partof,FPLX,000502,ETC_complex_II +HGNC,10682,SDHC,partof,FPLX,000502,ETC_complex_II +HGNC,10683,SDHD,partof,FPLX,000502,ETC_complex_II +HGNC,2579,CYC1,partof,FPLX,000503,ETC_complex_III +HGNC,7427,MT-CYB,partof,FPLX,000503,ETC_complex_III +HGNC,12582,UQCRB,partof,FPLX,000503,ETC_complex_III +HGNC,12585,UQCRC1,partof,FPLX,000503,ETC_complex_III +HGNC,12586,UQCRC2,partof,FPLX,000503,ETC_complex_III +HGNC,12587,UQCRFS1,partof,FPLX,000503,ETC_complex_III +HGNC,12590,UQCRH,partof,FPLX,000503,ETC_complex_III +HGNC,29594,UQCRQ,partof,FPLX,000503,ETC_complex_III +HGNC,30863,UQCR10,partof,FPLX,000503,ETC_complex_III +HGNC,30862,UQCR11,partof,FPLX,000503,ETC_complex_III +HGNC,2265,COX4I1,partof,FPLX,000504,ETC_complex_IV +HGNC,16232,COX4I2,partof,FPLX,000504,ETC_complex_IV +HGNC,2267,COX5A,partof,FPLX,000504,ETC_complex_IV +HGNC,2269,COX5B,partof,FPLX,000504,ETC_complex_IV +HGNC,2277,COX6A1,partof,FPLX,000504,ETC_complex_IV +HGNC,2279,COX6A2,partof,FPLX,000504,ETC_complex_IV +HGNC,2280,COX6B1,partof,FPLX,000504,ETC_complex_IV +HGNC,24380,COX6B2,partof,FPLX,000504,ETC_complex_IV +HGNC,2285,COX6C,partof,FPLX,000504,ETC_complex_IV +HGNC,2287,COX7A1,partof,FPLX,000504,ETC_complex_IV +HGNC,2288,COX7A2,partof,FPLX,000504,ETC_complex_IV +HGNC,2291,COX7B,partof,FPLX,000504,ETC_complex_IV +HGNC,24381,COX7B2,partof,FPLX,000504,ETC_complex_IV +HGNC,2292,COX7C,partof,FPLX,000504,ETC_complex_IV +HGNC,2294,COX8A,partof,FPLX,000504,ETC_complex_IV +HGNC,24382,COX8C,partof,FPLX,000504,ETC_complex_IV +HGNC,7419,MT-CO1,partof,FPLX,000504,ETC_complex_IV +HGNC,7421,MT-CO2,partof,FPLX,000504,ETC_complex_IV +HGNC,7422,MT-CO3,partof,FPLX,000504,ETC_complex_IV +HGNC,823,ATP5F1A,partof,FPLX,000060,ATP_synthase +HGNC,830,ATP5F1B,partof,FPLX,000060,ATP_synthase +HGNC,833,ATP5F1C,partof,FPLX,000060,ATP_synthase +HGNC,837,ATP5F1D,partof,FPLX,000060,ATP_synthase +HGNC,838,ATP5F1E,partof,FPLX,000060,ATP_synthase +HGNC,30889,ATP5MD,partof,FPLX,000060,ATP_synthase +HGNC,846,ATP5ME,partof,FPLX,000060,ATP_synthase +HGNC,848,ATP5MF,partof,FPLX,000060,ATP_synthase +HGNC,14247,ATP5MG,partof,FPLX,000060,ATP_synthase +HGNC,1188,ATP5MPL,partof,FPLX,000060,ATP_synthase +HGNC,7414,MT-ATP6,partof,FPLX,000060,ATP_synthase +HGNC,7415,MT-ATP8,partof,FPLX,000060,ATP_synthase +HGNC,840,ATP5PB,partof,FPLX,000060,ATP_synthase +HGNC,845,ATP5PD,partof,FPLX,000060,ATP_synthase +HGNC,847,ATP5PF,partof,FPLX,000060,ATP_synthase +HGNC,850,ATP5PO,partof,FPLX,000060,ATP_synthase +HGNC,871,ATP5IF1,partof,FPLX,000060,ATP_synthase +HGNC,841,ATP5MC1,isa,FPLX,000059,ATP5G +HGNC,842,ATP5MC2,isa,FPLX,000059,ATP5G +HGNC,843,ATP5MC3,isa,FPLX,000059,ATP5G +FPLX,000059,ATP5G,partof,FPLX,000060,ATP_synthase +HGNC,7393,MT1A,isa,FPLX,000292,Metallothionein +HGNC,7394,MT1B,isa,FPLX,000292,Metallothionein +HGNC,7395,MT1CP,isa,FPLX,000292,Metallothionein +HGNC,7396,MT1DP,isa,FPLX,000292,Metallothionein +HGNC,7397,MT1E,isa,FPLX,000292,Metallothionein +HGNC,7398,MT1F,isa,FPLX,000292,Metallothionein +HGNC,7399,MT1G,isa,FPLX,000292,Metallothionein +HGNC,7400,MT1H,isa,FPLX,000292,Metallothionein +HGNC,31864,MT1HL1,isa,FPLX,000292,Metallothionein +HGNC,7401,MT1IP,isa,FPLX,000292,Metallothionein +HGNC,7402,MT1JP,isa,FPLX,000292,Metallothionein +HGNC,7404,MT1L,isa,FPLX,000292,Metallothionein +HGNC,14296,MT1M,isa,FPLX,000292,Metallothionein +HGNC,23681,MT1P1,isa,FPLX,000292,Metallothionein +HGNC,16120,MT1P3,isa,FPLX,000292,Metallothionein +HGNC,7405,MT1X,isa,FPLX,000292,Metallothionein +HGNC,7406,MT2A,isa,FPLX,000292,Metallothionein +HGNC,7408,MT3,isa,FPLX,000292,Metallothionein +HGNC,18705,MT4,isa,FPLX,000292,Metallothionein +HGNC,660,TRIM23,isa,FPLX,000053,ARF_GTPase_family +HGNC,652,ARF1,isa,FPLX,000053,ARF_GTPase_family +HGNC,654,ARF3,isa,FPLX,000053,ARF_GTPase_family +HGNC,655,ARF4,isa,FPLX,000053,ARF_GTPase_family +HGNC,658,ARF5,isa,FPLX,000053,ARF_GTPase_family +HGNC,659,ARF6,isa,FPLX,000053,ARF_GTPase_family +HGNC,692,ARL1,isa,FPLX,000053,ARF_GTPase_family +HGNC,693,ARL2,isa,FPLX,000053,ARF_GTPase_family +HGNC,694,ARL3,isa,FPLX,000053,ARF_GTPase_family +HGNC,695,ARL4A,isa,FPLX,000053,ARF_GTPase_family +HGNC,698,ARL4C,isa,FPLX,000053,ARF_GTPase_family +HGNC,656,ARL4D,isa,FPLX,000053,ARF_GTPase_family +HGNC,696,ARL5A,isa,FPLX,000053,ARF_GTPase_family +HGNC,23052,ARL5B,isa,FPLX,000053,ARF_GTPase_family +HGNC,31111,ARL5C,isa,FPLX,000053,ARF_GTPase_family +HGNC,13210,ARL6,isa,FPLX,000053,ARF_GTPase_family +HGNC,25192,ARL8A,isa,FPLX,000053,ARF_GTPase_family +HGNC,25564,ARL8B,isa,FPLX,000053,ARF_GTPase_family +HGNC,23592,ARL9,isa,FPLX,000053,ARF_GTPase_family +HGNC,22042,ARL10,isa,FPLX,000053,ARF_GTPase_family +HGNC,24046,ARL11,isa,FPLX,000053,ARF_GTPase_family +HGNC,31709,ARL13A,isa,FPLX,000053,ARF_GTPase_family +HGNC,25419,ARL13B,isa,FPLX,000053,ARF_GTPase_family +HGNC,22974,ARL14,isa,FPLX,000053,ARF_GTPase_family +HGNC,25945,ARL15,isa,FPLX,000053,ARF_GTPase_family +HGNC,27902,ARL16,isa,FPLX,000053,ARF_GTPase_family +HGNC,24096,ARL17A,isa,FPLX,000053,ARF_GTPase_family +HGNC,32387,ARL17B,isa,FPLX,000053,ARF_GTPase_family +HGNC,662,ARFRP1,isa,FPLX,000053,ARF_GTPase_family +HGNC,10534,SAR1A,isa,FPLX,000053,ARF_GTPase_family +HGNC,10535,SAR1B,isa,FPLX,000053,ARF_GTPase_family +FPLX,000002,A4GALT_family,isa,FPLX,000198,Glycosyltransferase +FPLX,000026,ALG10,isa,FPLX,000198,Glycosyltransferase +FPLX,000027,ALG1_family,isa,FPLX,000198,Glycosyltransferase +FPLX,000028,ALG3_family,isa,FPLX,000198,Glycosyltransferase +FPLX,000029,ALG6_family,isa,FPLX,000198,Glycosyltransferase +FPLX,000030,ALG13_family,isa,FPLX,000198,Glycosyltransferase +FPLX,000063,B3GAT,isa,FPLX,000198,Glycosyltransferase +FPLX,000065,Beta_3_4_GTF,isa,FPLX,000198,Glycosyltransferase +FPLX,000112,COLGALT,isa,FPLX,000198,Glycosyltransferase +FPLX,000165,EXT,isa,FPLX,000198,Glycosyltransferase +FPLX,000176,FUT,isa,FPLX,000198,Glycosyltransferase +FPLX,000180,GALNT,isa,FPLX,000198,Glycosyltransferase +FPLX,000185,GCNT,isa,FPLX,000198,Glycosyltransferase +FPLX,000199,GTF_family_2,isa,FPLX,000198,Glycosyltransferase +FPLX,000200,GTF_family_6,isa,FPLX,000198,Glycosyltransferase +FPLX,000201,GTF_family_8,isa,FPLX,000198,Glycosyltransferase +FPLX,000202,GTF_family_29,isa,FPLX,000198,Glycosyltransferase +FPLX,000203,GTF_family_90,isa,FPLX,000198,Glycosyltransferase +FPLX,000287,MGAT,isa,FPLX,000198,Glycosyltransferase +FPLX,000322,OGT_family,isa,FPLX,000198,Glycosyltransferase +FPLX,000396,PYG,isa,FPLX,000198,Glycosyltransferase +FPLX,000455,STT3,isa,FPLX,000198,Glycosyltransferase +FPLX,000491,UGCG,isa,FPLX,000198,Glycosyltransferase +FPLX,000492,UGT,isa,FPLX,000198,Glycosyltransferase +FPLX,000493,UGGT,isa,FPLX,000198,Glycosyltransferase +HGNC,23162,ALG10,isa,FPLX,000026,ALG10 +HGNC,31088,ALG10B,isa,FPLX,000026,ALG10 +HGNC,23157,ALG6,isa,FPLX,000029,ALG6_family +HGNC,23161,ALG8,isa,FPLX,000029,ALG6_family +HGNC,18149,A4GALT,isa,FPLX,000002,A4GALT_family +HGNC,17968,A4GNT,isa,FPLX,000002,A4GALT_family +HGNC,921,B3GAT1,isa,FPLX,000063,B3GAT +HGNC,922,B3GAT2,isa,FPLX,000063,B3GAT +HGNC,923,B3GAT3,isa,FPLX,000063,B3GAT +HGNC,918,B3GALNT1,isa,FPLX,000065,Beta_3_4_GTF +HGNC,28596,B3GALNT2,isa,FPLX,000065,Beta_3_4_GTF +HGNC,20207,B3GLCT,isa,FPLX,000065,Beta_3_4_GTF +HGNC,916,B3GALT1,isa,FPLX,000065,Beta_3_4_GTF +HGNC,917,B3GALT2,isa,FPLX,000065,Beta_3_4_GTF +HGNC,919,B3GALT4,isa,FPLX,000065,Beta_3_4_GTF +HGNC,920,B3GALT5,isa,FPLX,000065,Beta_3_4_GTF +HGNC,17978,B3GALT6,isa,FPLX,000065,Beta_3_4_GTF +HGNC,15629,B3GNT2,isa,FPLX,000065,Beta_3_4_GTF +HGNC,13528,B3GNT3,isa,FPLX,000065,Beta_3_4_GTF +HGNC,15683,B3GNT4,isa,FPLX,000065,Beta_3_4_GTF +HGNC,15684,B3GNT5,isa,FPLX,000065,Beta_3_4_GTF +HGNC,24141,B3GNT6,isa,FPLX,000065,Beta_3_4_GTF +HGNC,18811,B3GNT7,isa,FPLX,000065,Beta_3_4_GTF +HGNC,24139,B3GNT8,isa,FPLX,000065,Beta_3_4_GTF +HGNC,28714,B3GNT9,isa,FPLX,000065,Beta_3_4_GTF +HGNC,24291,CHPF,isa,FPLX,000065,Beta_3_4_GTF +HGNC,29270,CHPF2,isa,FPLX,000065,Beta_3_4_GTF +HGNC,17198,CHSY1,isa,FPLX,000065,Beta_3_4_GTF +HGNC,24293,CHSY3,isa,FPLX,000065,Beta_3_4_GTF +HGNC,24337,C1GALT1,isa,FPLX,000065,Beta_3_4_GTF +HGNC,6560,LFNG,isa,FPLX,000065,Beta_3_4_GTF +HGNC,7038,MFNG,isa,FPLX,000065,Beta_3_4_GTF +HGNC,9974,RFNG,isa,FPLX,000065,Beta_3_4_GTF +HGNC,4117,B4GALNT1,isa,FPLX,000065,Beta_3_4_GTF +HGNC,24136,B4GALNT2,isa,FPLX,000065,Beta_3_4_GTF +HGNC,24137,B4GALNT3,isa,FPLX,000065,Beta_3_4_GTF +HGNC,26315,B4GALNT4,isa,FPLX,000065,Beta_3_4_GTF +HGNC,924,B4GALT1,isa,FPLX,000065,Beta_3_4_GTF +HGNC,925,B4GALT2,isa,FPLX,000065,Beta_3_4_GTF +HGNC,926,B4GALT3,isa,FPLX,000065,Beta_3_4_GTF +HGNC,927,B4GALT4,isa,FPLX,000065,Beta_3_4_GTF +HGNC,928,B4GALT5,isa,FPLX,000065,Beta_3_4_GTF +HGNC,929,B4GALT6,isa,FPLX,000065,Beta_3_4_GTF +HGNC,930,B4GALT7,isa,FPLX,000065,Beta_3_4_GTF +HGNC,24290,CSGALNACT1,isa,FPLX,000065,Beta_3_4_GTF +HGNC,24292,CSGALNACT2,isa,FPLX,000065,Beta_3_4_GTF +HGNC,26182,COLGALT1,isa,FPLX,000112,COLGALT +HGNC,16790,COLGALT2,isa,FPLX,000112,COLGALT +HGNC,23056,ALG3,isa,FPLX,000028,ALG3_family +HGNC,15672,ALG9,isa,FPLX,000028,ALG3_family +HGNC,19358,ALG12,isa,FPLX,000028,ALG3_family +HGNC,8959,PIGB,isa,FPLX,000028,ALG3_family +HGNC,18858,PIGM,isa,FPLX,000028,ALG3_family +HGNC,26031,PIGV,isa,FPLX,000028,ALG3_family +HGNC,30596,PIGZ,isa,FPLX,000028,ALG3_family +HGNC,9202,POMT1,isa,FPLX,000028,ALG3_family +HGNC,19743,POMT2,isa,FPLX,000028,ALG3_family +HGNC,3515,EXTL1,isa,FPLX,000165,EXT +HGNC,3516,EXTL2,isa,FPLX,000165,EXT +HGNC,3518,EXTL3,isa,FPLX,000165,EXT +HGNC,3512,EXT1,isa,FPLX,000165,EXT +HGNC,3513,EXT2,isa,FPLX,000165,EXT +HGNC,4012,FUT1,isa,FPLX,000176,FUT +HGNC,4013,FUT2,isa,FPLX,000176,FUT +HGNC,4014,FUT3,isa,FPLX,000176,FUT +HGNC,4015,FUT4,isa,FPLX,000176,FUT +HGNC,4016,FUT5,isa,FPLX,000176,FUT +HGNC,4017,FUT6,isa,FPLX,000176,FUT +HGNC,4018,FUT7,isa,FPLX,000176,FUT +HGNC,4019,FUT8,isa,FPLX,000176,FUT +HGNC,4020,FUT9,isa,FPLX,000176,FUT +HGNC,19234,FUT10,isa,FPLX,000176,FUT +HGNC,19233,FUT11,isa,FPLX,000176,FUT +HGNC,14988,POFUT1,isa,FPLX,000176,FUT +HGNC,14683,POFUT2,isa,FPLX,000176,FUT +HGNC,4203,GCNT1,isa,FPLX,000185,GCNT +HGNC,4204,GCNT2,isa,FPLX,000185,GCNT +HGNC,4205,GCNT3,isa,FPLX,000185,GCNT +HGNC,17973,GCNT4,isa,FPLX,000185,GCNT +HGNC,16099,GCNT7,isa,FPLX,000185,GCNT +HGNC,15516,XYLT1,isa,FPLX,000185,GCNT +HGNC,15517,XYLT2,isa,FPLX,000185,GCNT +HGNC,9723,PYGB,isa,FPLX,000396,PYG +HGNC,9725,PYGL,isa,FPLX,000396,PYG +HGNC,9726,PYGM,isa,FPLX,000396,PYG +HGNC,20266,ALG5,isa,FPLX,000199,GTF_family_2 +HGNC,21727,B3GNTL1,isa,FPLX,000199,GTF_family_2 +HGNC,3005,DPM1,isa,FPLX,000199,GTF_family_2 +HGNC,4818,HAS1,isa,FPLX,000199,GTF_family_2 +HGNC,4819,HAS2,isa,FPLX,000199,GTF_family_2 +HGNC,4820,HAS3,isa,FPLX,000199,GTF_family_2 +HGNC,79,ABO,isa,FPLX,000200,GTF_family_6 +HGNC,30005,A3GALT2,isa,FPLX,000200,GTF_family_6 +HGNC,20460,GBGT1,isa,FPLX,000200,GTF_family_6 +HGNC,23671,GLT6D1,isa,FPLX,000200,GTF_family_6 +HGNC,24870,GLT8D1,isa,FPLX,000201,GTF_family_8 +HGNC,24890,GLT8D2,isa,FPLX,000201,GTF_family_8 +HGNC,27482,GXYLT1,isa,FPLX,000201,GTF_family_8 +HGNC,33383,GXYLT2,isa,FPLX,000201,GTF_family_8 +HGNC,4699,GYG1,isa,FPLX,000201,GTF_family_8 +HGNC,4700,GYG2,isa,FPLX,000201,GTF_family_8 +HGNC,6511,LARGE1,isa,FPLX,000201,GTF_family_8 +HGNC,16522,LARGE2,isa,FPLX,000201,GTF_family_8 +HGNC,13530,RXYLT1,isa,FPLX,000201,GTF_family_8 +HGNC,26639,XXYLT1,isa,FPLX,000201,GTF_family_8 +HGNC,19350,POGLUT2,isa,FPLX,000203,GTF_family_90 +HGNC,28496,POGLUT3,isa,FPLX,000203,GTF_family_90 +HGNC,22954,POGLUT1,isa,FPLX,000203,GTF_family_90 +HGNC,18294,ALG1,isa,FPLX,000027,ALG1_family +HGNC,33721,ALG1L,isa,FPLX,000027,ALG1_family +HGNC,37258,ALG1L2,isa,FPLX,000027,ALG1_family +HGNC,23159,ALG2,isa,FPLX,000027,ALG1_family +HGNC,32456,ALG11,isa,FPLX,000027,ALG1_family +HGNC,26483,GLT1D1,isa,FPLX,000027,ALG1_family +HGNC,20887,GTDC1,isa,FPLX,000027,ALG1_family +HGNC,4706,GYS1,isa,FPLX,000027,ALG1_family +HGNC,4707,GYS2,isa,FPLX,000027,ALG1_family +HGNC,8957,PIGA,isa,FPLX,000027,ALG1_family +HGNC,7044,MGAT1,isa,FPLX,000287,MGAT +HGNC,7045,MGAT2,isa,FPLX,000287,MGAT +HGNC,7046,MGAT3,isa,FPLX,000287,MGAT +HGNC,7047,MGAT4A,isa,FPLX,000287,MGAT +HGNC,7048,MGAT4B,isa,FPLX,000287,MGAT +HGNC,30871,MGAT4C,isa,FPLX,000287,MGAT +HGNC,43619,MGAT4D,isa,FPLX,000287,MGAT +HGNC,7049,MGAT5,isa,FPLX,000287,MGAT +HGNC,24140,MGAT5B,isa,FPLX,000287,MGAT +HGNC,28526,EOGT,isa,FPLX,000322,OGT_family +HGNC,8127,OGT,isa,FPLX,000322,OGT_family +HGNC,19139,POMGNT1,isa,FPLX,000322,OGT_family +HGNC,25902,POMGNT2,isa,FPLX,000322,OGT_family +HGNC,21725,GALNTL5,isa,FPLX,000180,GALNT +HGNC,33844,GALNTL6,isa,FPLX,000180,GALNT +HGNC,4123,GALNT1,isa,FPLX,000180,GALNT +HGNC,4124,GALNT2,isa,FPLX,000180,GALNT +HGNC,4125,GALNT3,isa,FPLX,000180,GALNT +HGNC,4126,GALNT4,isa,FPLX,000180,GALNT +HGNC,4127,GALNT5,isa,FPLX,000180,GALNT +HGNC,4128,GALNT6,isa,FPLX,000180,GALNT +HGNC,4129,GALNT7,isa,FPLX,000180,GALNT +HGNC,4130,GALNT8,isa,FPLX,000180,GALNT +HGNC,4131,GALNT9,isa,FPLX,000180,GALNT +HGNC,19873,GALNT10,isa,FPLX,000180,GALNT +HGNC,19875,GALNT11,isa,FPLX,000180,GALNT +HGNC,19877,GALNT12,isa,FPLX,000180,GALNT +HGNC,23242,GALNT13,isa,FPLX,000180,GALNT +HGNC,22946,GALNT14,isa,FPLX,000180,GALNT +HGNC,21531,GALNT15,isa,FPLX,000180,GALNT +HGNC,23233,GALNT16,isa,FPLX,000180,GALNT +HGNC,30488,GALNT18,isa,FPLX,000180,GALNT +HGNC,16347,GALNT17,isa,FPLX,000180,GALNT +HGNC,10862,ST3GAL1,isa,FPLX,000202,GTF_family_29 +HGNC,10863,ST3GAL2,isa,FPLX,000202,GTF_family_29 +HGNC,10866,ST3GAL3,isa,FPLX,000202,GTF_family_29 +HGNC,10864,ST3GAL4,isa,FPLX,000202,GTF_family_29 +HGNC,10872,ST3GAL5,isa,FPLX,000202,GTF_family_29 +HGNC,18080,ST3GAL6,isa,FPLX,000202,GTF_family_29 +HGNC,23614,ST6GALNAC1,isa,FPLX,000202,GTF_family_29 +HGNC,10867,ST6GALNAC2,isa,FPLX,000202,GTF_family_29 +HGNC,19343,ST6GALNAC3,isa,FPLX,000202,GTF_family_29 +HGNC,17846,ST6GALNAC4,isa,FPLX,000202,GTF_family_29 +HGNC,19342,ST6GALNAC5,isa,FPLX,000202,GTF_family_29 +HGNC,23364,ST6GALNAC6,isa,FPLX,000202,GTF_family_29 +HGNC,10860,ST6GAL1,isa,FPLX,000202,GTF_family_29 +HGNC,10861,ST6GAL2,isa,FPLX,000202,GTF_family_29 +HGNC,10869,ST8SIA1,isa,FPLX,000202,GTF_family_29 +HGNC,10870,ST8SIA2,isa,FPLX,000202,GTF_family_29 +HGNC,14269,ST8SIA3,isa,FPLX,000202,GTF_family_29 +HGNC,10871,ST8SIA4,isa,FPLX,000202,GTF_family_29 +HGNC,17827,ST8SIA5,isa,FPLX,000202,GTF_family_29 +HGNC,23317,ST8SIA6,isa,FPLX,000202,GTF_family_29 +HGNC,6172,STT3A,isa,FPLX,000455,STT3 +HGNC,30611,STT3B,isa,FPLX,000455,STT3 +HGNC,12524,UGCG,isa,FPLX,000491,UGCG +HGNC,15663,UGGT1,isa,FPLX,000493,UGGT +HGNC,15664,UGGT2,isa,FPLX,000493,UGGT +HGNC,12529,UGT1A,isa,FPLX,000492,UGT +HGNC,12530,UGT1A1,isa,FPLX,000492,UGT +HGNC,12534,UGT1A2P,isa,FPLX,000492,UGT +HGNC,12535,UGT1A3,isa,FPLX,000492,UGT +HGNC,12536,UGT1A4,isa,FPLX,000492,UGT +HGNC,12537,UGT1A5,isa,FPLX,000492,UGT +HGNC,12538,UGT1A6,isa,FPLX,000492,UGT +HGNC,12539,UGT1A7,isa,FPLX,000492,UGT +HGNC,12540,UGT1A8,isa,FPLX,000492,UGT +HGNC,12541,UGT1A9,isa,FPLX,000492,UGT +HGNC,12531,UGT1A10,isa,FPLX,000492,UGT +HGNC,12532,UGT1A11P,isa,FPLX,000492,UGT +HGNC,12533,UGT1A12P,isa,FPLX,000492,UGT +HGNC,32191,UGT1A13P,isa,FPLX,000492,UGT +HGNC,12542,UGT2A1,isa,FPLX,000492,UGT +HGNC,28183,UGT2A2,isa,FPLX,000492,UGT +HGNC,28528,UGT2A3,isa,FPLX,000492,UGT +HGNC,12553,UGT2B4,isa,FPLX,000492,UGT +HGNC,12554,UGT2B7,isa,FPLX,000492,UGT +HGNC,12544,UGT2B10,isa,FPLX,000492,UGT +HGNC,12545,UGT2B11,isa,FPLX,000492,UGT +HGNC,12546,UGT2B15,isa,FPLX,000492,UGT +HGNC,12547,UGT2B17,isa,FPLX,000492,UGT +HGNC,12548,UGT2B24P,isa,FPLX,000492,UGT +HGNC,12549,UGT2B25P,isa,FPLX,000492,UGT +HGNC,12550,UGT2B26P,isa,FPLX,000492,UGT +HGNC,12551,UGT2B27P,isa,FPLX,000492,UGT +HGNC,13479,UGT2B28,isa,FPLX,000492,UGT +HGNC,12552,UGT2B29P,isa,FPLX,000492,UGT +HGNC,26625,UGT3A1,isa,FPLX,000492,UGT +HGNC,27266,UGT3A2,isa,FPLX,000492,UGT +HGNC,12555,UGT8,isa,FPLX,000492,UGT +HGNC,30881,ALG13,isa,FPLX,000030,ALG13_family +HGNC,28287,ALG14,isa,FPLX,000030,ALG13_family +HGNC,9855,RAP1A,isa,FPLX,000401,RAP1 +HGNC,9857,RAP1B,isa,FPLX,000401,RAP1 +HGNC,11142,SIK1,isa,FPLX,000433,SIK +HGNC,21680,SIK2,isa,FPLX,000433,SIK +HGNC,29165,SIK3,isa,FPLX,000433,SIK +HGNC,3091,DYRK1A,isa,FPLX,000146,DYRK +HGNC,3092,DYRK1B,isa,FPLX,000146,DYRK +HGNC,3093,DYRK2,isa,FPLX,000146,DYRK +HGNC,3094,DYRK3,isa,FPLX,000146,DYRK +HGNC,3095,DYRK4,isa,FPLX,000146,DYRK +HGNC,25174,HAUS1,partof,FPLX,000061,Augmin +HGNC,25530,HAUS2,partof,FPLX,000061,Augmin +HGNC,28719,HAUS3,partof,FPLX,000061,Augmin +HGNC,20163,HAUS4,partof,FPLX,000061,Augmin +HGNC,29130,HAUS5,partof,FPLX,000061,Augmin +HGNC,25948,HAUS6,partof,FPLX,000061,Augmin +HGNC,32979,HAUS7,partof,FPLX,000061,Augmin +HGNC,30532,HAUS8,partof,FPLX,000061,Augmin +HGNC,16062,CRTC1,isa,FPLX,000123,CRTC +HGNC,27301,CRTC2,isa,FPLX,000123,CRTC +HGNC,26148,CRTC3,isa,FPLX,000123,CRTC diff --git a/grounding_map.csv b/grounding_map.csv index 5e87c69f4..ecc3bed05 100644 --- a/grounding_map.csv +++ b/grounding_map.csv @@ -529,8 +529,9 @@ cell adhesion,GO,GO:0007155,MESH,D002448,, cell cycle,GO,GO:0007049,MESH,D002453,, cell death,GO,GO:0008219,MESH,D016923,, cell growth,GO,GO:0016049,MESH,D048708,, -cell migration,GO,GO:0016477,MESH,D002465,, +cell migration,GO,GO:0016477,MESH,D002465,NCIT,C26169 cell motility,GO,GO:0016477,MESH,D002465,, +cell motility,NCIT,C16404,GO,GO:0048870,, cell proliferation,GO,GO:0008283,MESH,D049109,, cell survival,MESH,D002470,,,, cell viability,MESH,D002470,,,, @@ -1732,7 +1733,6 @@ PBXs,FPLX,PBX,,,, Pca,MESH,D011471,,,, PCNA,UP,P12004,,,, PD,MESH,D010300,,,, -PD-1,HGNC,PDCD1,,,, PD98509,CHEBI,CHEBI:79091,,,, PDE 2,HGNC,PDE2A,,,, PDE 3,FPLX,PDE3,,,, @@ -2549,8 +2549,6 @@ eGFR,MESH,D005919,,,, CDK1/2,FPLX,CDK1_2,,,, cdk1/2,FPLX,CDK1_2,,,, Cdk1/2,FPLX,CDK1_2,,,, -cell migration,MESH,D002465,NCIT,C26169,GO,GO:0016477 -cell motility,MESH,D002465,NCIT,C16404,GO,GO:0048870 Chk1/2,FPLX,CHEK,,,, chromosomal instability,MESH,D043171,NCIT,C48195,, chromosomal instabiliy,MESH,D043171,NCIT,C48195,, diff --git a/import/bel_grounding_map.py b/import/bel_grounding_map.py index ba97de918..6083d2d87 100644 --- a/import/bel_grounding_map.py +++ b/import/bel_grounding_map.py @@ -1,6 +1,7 @@ -from common import * +from common import load_entity_list, load_equivalences, load_grounding_map -if __name__ == '__main__': + +def main(): equivalences = load_equivalences('../equivalences.csv') has_bel_mapping = set() for source_db, source_id, be_id in equivalences: @@ -40,3 +41,7 @@ bel_to_lookup = sorted(bel_counts.items(), key=lambda x: x[1], reverse=True) bel_to_lookup = [b for b in bel_to_lookup if b[1] > 0] + + +if __name__ == '__main__': + main() diff --git a/import/common.py b/import/common.py index 273ef29b4..e0ce6e0cd 100644 --- a/import/common.py +++ b/import/common.py @@ -1,13 +1,11 @@ -import re -import sys import csv -from indra.statements import Agent +import sys + from indra.databases import hgnc_client -from indra.databases import uniprot_client -from indra.tools.expand_families import Expander from indra.preassembler.hierarchy_manager import hierarchies +from indra.statements import Agent +from indra.tools.expand_families import Expander -import common def read_csv(fh, delimiter, quotechar): if sys.version_info.major < 3: @@ -63,7 +61,7 @@ def load_entity_list(filename): def get_child_map(): """Get dictionary mapping FPLX IDs to Uniprot IDs of all children.""" - entities = common.load_entity_list('../entities.csv') + entities = load_entity_list('../entities.csv') be_agents = [Agent(be_id, db_refs={'FPLX': be_id}) for be_id in entities] diff --git a/import/greek_letter_mappings.py b/import/greek_letter_mappings.py index 4c29d9e03..817d2dcdd 100644 --- a/import/greek_letter_mappings.py +++ b/import/greek_letter_mappings.py @@ -4,15 +4,17 @@ character, and add en entry to the grounding map for each of these if they aren't already in there""" -import os import csv +import os + from indra.resources.greek_alphabet import greek_alphabet # These are the characters that are spelled out and we want to map chars_to_map = ['alpha', 'beta', 'gamma', 'delta', 'epsilon', 'kappa', 'theta'] greek_reverse = {v: k for k, v in greek_alphabet.items()} -if __name__ == '__main__': + +def main(): path_this = os.path.dirname(os.path.abspath(__file__)) gm_file = os.path.join(path_this, os.pardir, 'grounding_map.csv') new_rows = [] @@ -53,3 +55,5 @@ csvwriter.writerow(row) +if __name__ == '__main__': + main() diff --git a/import/interpro_mappings.py b/import/interpro_mappings.py index 3e32c0f67..a2ed9d8a2 100644 --- a/import/interpro_mappings.py +++ b/import/interpro_mappings.py @@ -1,19 +1,19 @@ import json +import os from collections import defaultdict -from indra.statements import Agent -from indra.databases import hgnc_client -from indra.tools.expand_families import Expander -from indra.preassembler.hierarchy_manager import hierarchies + +from common import get_child_map, jaccard_index, read_csv from indra.databases import uniprot_client -import common def get_ip_families_for_be(be_up_ids, cache_file=None): - if cache_file is not None: + if cache_file is not None and os.path.exists(cache_file): with open(cache_file, 'rt') as f: ipfs = [line.strip() for line in f.readlines()] return ipfs + # If not cached, read from file + ip_families_for_be = set() with open('protein2ipr.dat', 'rt') as f: counter = 0 while True: @@ -29,9 +29,14 @@ def get_ip_families_for_be(be_up_ids, cache_file=None): ip_families_for_be.add(ip_id) counter += 1 + return ip_families_for_be + -def get_ip_family_members(ip_families_for_be, ip_datafile='protein2ipr.dat', - cache_file=None): +def get_ip_family_members( + ip_families_for_be, + ip_datafile='protein2ipr.dat', + cache_file=None, +): # Check if Interpro info is cached if cache_file is not None: with open(cache_file, 'rt') as f: @@ -51,8 +56,10 @@ def get_ip_family_members(ip_families_for_be, ip_datafile='protein2ipr.dat', if ip_id in ip_families_for_be and uniprot_client.is_human(up_id): ip_fam_info = ip_family_members.get(ip_id) if ip_fam_info is None: - ip_family_members[ip_id] = {'name': ip_name, - 'members': [up_id]} + ip_family_members[ip_id] = { + 'name': ip_name, + 'members': [up_id] + } else: ip_fam_info['members'].append(up_id) counter += 1 @@ -63,7 +70,7 @@ def get_ip_family_members(ip_families_for_be, ip_datafile='protein2ipr.dat', def load_uniprot(filename): with open(filename, 'rt') as f: - entries = common.read_csv(f, delimiter='\t', quotechar='"') + entries = read_csv(f, delimiter='\t', quotechar='"') up_ids = [row[0] for row in entries[1:]] return up_ids @@ -85,31 +92,44 @@ def get_mappings(be_child_map, ip_family_members, uniprot_ids, # Skip empty sets if not ip_set: continue - jacc = common.jaccard_index(be_set, ip_set) + jacc = jaccard_index(be_set, ip_set) if jacc >= jaccard_cutoff: - mapping = {'id': ip_id, 'name': ip_name, - 'members': list(ip_set), 'jaccardIndex': jacc, - 'equivalence': 'IP,%s,%s' % (ip_id, be_id)} + mapping = { + 'id': ip_id, 'name': ip_name, + 'members': list(ip_set), 'jaccardIndex': jacc, + 'equivalence': 'IP,%s,%s' % (ip_id, be_id) + } mappings[be_id].append(mapping) if be_id in mappings: mappings[be_id].sort(key=lambda d: d['jaccardIndex'], reverse=True) return mappings -if __name__ == '__main__': - be_child_map = common.get_child_map() +def main(): + be_child_map = get_child_map() be_up_ids = [up_id for child_list in be_child_map.values() - for up_id in child_list] + for up_id in child_list] - ip_families_for_be = get_ip_families_for_be(be_up_ids, - cache_file='ip_families_for_be.txt') - ip_family_members = get_ip_family_members(ip_families_for_be, - cache_file='ip_family_members.json') + ip_families_for_be = get_ip_families_for_be( + be_up_ids, + cache_file='ip_families_for_be.txt', + ) + ip_family_members = get_ip_family_members( + ip_families_for_be, + cache_file='ip_family_members.json', + ) up_ids = load_uniprot('uniprot_reviewed_human.tsv') - mappings = get_mappings(be_child_map, ip_family_members, up_ids, - jaccard_cutoff=1) + mappings = get_mappings( + be_child_map, + ip_family_members, + up_ids, + jaccard_cutoff=1, + ) for be_id, map_list in mappings.items(): for map_info in map_list: ip_id = map_info['id'] print("IP,%s,%s" % (ip_id, be_id)) + +if __name__ == '__main__': + main() diff --git a/import/reactome_mappings.py b/import/reactome_mappings.py index 770368c44..569c588a6 100644 --- a/import/reactome_mappings.py +++ b/import/reactome_mappings.py @@ -1,23 +1,24 @@ -import csv import json -import requests -from functools import lru_cache +import os from collections import defaultdict +from functools import lru_cache + +import requests -import common +from common import get_child_map, jaccard_index @lru_cache(10000) def rx_id_from_up_id(up_id): """Get the Reactome Stable ID for a given Uniprot ID.""" react_search_url = 'http://www.reactome.org/ContentService/search/query' - params = {'query': up_id, 'cluster': 'true', 'species':'Homo sapiens'} + params = {'query': up_id, 'cluster': 'true', 'species': 'Homo sapiens'} headers = {'Accept': 'application/json'} res = requests.get(react_search_url, headers=headers, params=params) if not res.status_code == 200: return None - json = res.json() - results = json.get('results') + res_json = res.json() + results = res_json.get('results') if not results: print('No results for %s' % up_id) return None @@ -53,16 +54,16 @@ def up_id_from_rx_id(reactome_id): @lru_cache(10000) def get_participants(reactome_id): - """Get Uniprot IDs of members of a Reactome DefinedSet or CandidateSet.""" + """Get UniProt IDs of members of a Reactome DefinedSet or CandidateSet.""" react_url = 'http://www.reactome.org/ContentService/data/event/' \ + reactome_id + '/participatingReferenceEntities' headers = {'Accept': 'application/json'} res = requests.get(react_url, headers=headers) if not res.status_code == 200: return [] - json = res.json() + res_json = res.json() up_ids = [] - for res in json: + for res in res_json: if not res.get('databaseName') == 'UniProt': continue up_id = res.get('identifier') @@ -73,16 +74,16 @@ def get_participants(reactome_id): @lru_cache(10000) def get_subunits(complex_id): - """Get Uniprot IDs of subunits of a Reactome Complex.""" + """Get UniProt IDs of subunits of a Reactome Complex.""" react_url = 'http://www.reactome.org/ContentService/data/complex/' \ + complex_id + '/subunits' headers = {'Accept': 'application/json'} res = requests.get(react_url, headers=headers) if not res.status_code == 200: return [] - json = res.json() + res_json = res.json() up_ids = [] - for subunit in json: + for subunit in res_json: subunit_rx_id = subunit.get('stId') if not subunit_rx_id: continue @@ -94,20 +95,19 @@ def get_subunits(complex_id): @lru_cache(10000) def _get_parents(stable_id): - """Recursively get all parents of a Reactome ID.""" + """Get all parents of a Reactome ID recursively.""" react_data_url = 'http://www.reactome.org/ContentService/data/entity/' + \ stable_id + '/componentOf' headers = {'Accept': 'application/json'} res = requests.get(react_data_url, headers=headers) if not res.status_code == 200: return [] - json = res.json() + res_json = res.json() names = [] stable_ids = [] schema_classes = [] - for parent_group in json: - if not parent_group.get('type') in \ - ['hasComponent', 'hasMember', 'hasCandidate']: + for parent_group in res_json: + if not parent_group.get('type') in ['hasComponent', 'hasMember', 'hasCandidate']: continue names += parent_group.get('names') stable_ids += parent_group.get('stIds') @@ -121,10 +121,10 @@ def _get_parents(stable_id): @lru_cache(10000) def get_all_parents(up_id): - """Get all parents for all Reactome IDs linked to a Uniprot ID.""" + """Get all parents for all Reactome IDs linked to a UniProt ID.""" linked_stable_ids = rx_id_from_up_id(up_id) if linked_stable_ids is None: - return ([], []) + return [], [] parents = [] for ls_id in linked_stable_ids: parents += _get_parents(ls_id) @@ -133,22 +133,22 @@ def get_all_parents(up_id): return sets, complexes -def get_rx_family_members(up_ids, cache_file=None): - """Get dictionary mapping Reactome sets/complexes to member Uniprot IDs.""" +def get_rx_family_members(fplx_id_to_children, cache_file=None): + """Get dictionary mapping Reactome sets/complexes to member UniProt IDs.""" # Check to see if we're loading from a cache - if cache_file is not None: + if cache_file is not None and os.path.exists(cache_file): with open(cache_file, 'rt') as f: rx_family_members = json.load(f) return rx_family_members # Not cached, get members from the Reactome web service rx_family_members = {} - for be_id, children_up_ids in be_child_map.items(): - print("Getting family info for %s" % be_id) + for fplx_id, up_ids in fplx_id_to_children.items(): + print("Getting family info for FPLX:%s" % fplx_id) # For every child, get all parents in Reactome rx_sets = set([]) rx_complexes = set([]) - for up_id in children_up_ids: + for up_id in up_ids: sets, complexes = get_all_parents(up_id) rx_sets = rx_sets.union(sets) rx_complexes = rx_complexes.union(complexes) @@ -169,8 +169,10 @@ def get_rx_family_members(up_ids, cache_file=None): (rx_type, name, rx_id)) continue # Save info in dict - rx_family_members[rx_id] = {'name': name, 'type': rx_type, - 'members': list(rx_members)} + rx_family_members[rx_id] = { + 'name': name, 'type': rx_type, + 'members': list(rx_members) + } # Save to JSON with open('rx_family_members.json', 'wt') as f: json.dump(rx_family_members, f, indent=2) @@ -178,13 +180,14 @@ def get_rx_family_members(up_ids, cache_file=None): return rx_family_members -def get_mappings(be_child_map, rx_family_members, jaccard_cutoff=1.): +def get_mappings(fplx_id_to_children, rx_family_members, jaccard_cutoff=1.): """Find matches between FPLX and Reactome families/complexes.""" mappings = defaultdict(list) - for be_id, be_children in be_child_map.items(): + + for fplx_id, up_ids in fplx_id_to_children.items(): # Skip empty sets - be_set = set(be_children) - if not be_set: + up_ids = set(up_ids) + if not up_ids: continue for rx_id, rx_info in rx_family_members.items(): rx_name = rx_info['name'] @@ -193,24 +196,32 @@ def get_mappings(be_child_map, rx_family_members, jaccard_cutoff=1.): # Skip empty sets if not rx_set: continue - jacc = common.jaccard_index(be_set, rx_set) + jacc = jaccard_index(up_ids, rx_set) if jacc >= jaccard_cutoff: - mapping = {'reactomeId': rx_id, 'reactomeType': rx_type, - 'reactomeName': rx_name, - 'reactomeMembers': list(rx_set), - 'jaccardIndex': jacc} - mappings[be_id].append(mapping) - if be_id in mappings: - mappings[be_id].sort(key=lambda d: d['jaccardIndex'], reverse=True) - return mappings + mappings[fplx_id].append({ + 'reactomeId': rx_id, + 'reactomeType': rx_type, + 'reactomeName': rx_name, + 'reactomeMembers': list(rx_set), + 'jaccardIndex': jacc, + }) + + if fplx_id in mappings: + mappings[fplx_id].sort(key=lambda d: d['jaccardIndex'], reverse=True) + + return dict(mappings) + + +def main(): + fplx_child_map = get_child_map() + rx_family_members = get_rx_family_members( + fplx_child_map, + cache_file='rx_family_members.json', + ) + mappings = get_mappings(fplx_child_map, rx_family_members, jaccard_cutoff=1.) + with open('reactome_mappings.json', 'wt') as f: + json.dump(mappings, f, indent=2) if __name__ == '__main__': - be_child_map = common.get_child_map() - be_up_ids = [up_id for child_list in be_child_map.values() - for up_id in child_list] - rx_family_members = get_rx_family_members(be_up_ids, - cache_file='rx_family_members.json') - mappings = get_mappings(be_child_map, rx_family_members, jaccard_cutoff=1.) - with open('reactome_mappings.json', 'wt') as f: - json.dump(mappings, f, indent=2) + main() diff --git a/import/signor_mappings.py b/import/signor_mappings.py index 3856d29e3..133faa3d6 100644 --- a/import/signor_mappings.py +++ b/import/signor_mappings.py @@ -1,14 +1,16 @@ """Propose mappings between FamPlex and Signor families based on members.""" + import csv -from collections import namedtuple, defaultdict -import common +from collections import defaultdict + +from common import get_child_map, jaccard_index def get_signor_pf_map(pf_filename): signor_pf = {} with open(pf_filename, 'rt') as f: csvreader = csv.reader(f, delimiter=';') - next(csvreader) # Skip header row + next(csvreader) # Skip header row for row in csvreader: pf_id, pf_name, pf_member_list = row up_ids = [s.strip() for s in pf_member_list.split(',')] @@ -29,26 +31,31 @@ def get_mappings(fplx_child_map, signor_pf_map, jaccard_cutoff=1.): fplx_set = set(fplx_children) if not fplx_set: continue - jacc = common.jaccard_index(fplx_set, signor_set) + jacc = jaccard_index(fplx_set, signor_set) if jacc >= jaccard_cutoff: - mapping = {'signorId': signor_id, - 'signorName': signor_name, - 'signorMembers': list(signor_set), - 'fplxId': fplx_id, - 'fplxMembers': list(fplx_set), - 'eqEntry': 'SIGNOR,%s,%s' % (signor_id, fplx_id), - 'jaccardIndex': jacc} - mappings[signor_id].append(mapping) + mappings[signor_id].append({ + 'signorId': signor_id, + 'signorName': signor_name, + 'signorMembers': list(signor_set), + 'fplxId': fplx_id, + 'fplxMembers': list(fplx_set), + 'eqEntry': 'SIGNOR,%s,%s' % (signor_id, fplx_id), + 'jaccardIndex': jacc, + }) + if signor_id in mappings: - mappings[signor_id].sort(key=lambda d: d['jaccardIndex'], - reverse=True) - return mappings + mappings[signor_id].sort(key=lambda d: d['jaccardIndex'], reverse=True) + return dict(mappings) -if __name__ == '__main__': - fplx_child_map = common.get_child_map() + +def main(): + fplx_child_map = get_child_map() signor_pf_map = get_signor_pf_map('SIGNOR_PF.csv') mappings = get_mappings(fplx_child_map, signor_pf_map, jaccard_cutoff=1.) for k, v in mappings.items(): print(v[0]['eqEntry']) + +if __name__ == '__main__': + main()