Add GTDB accession as name entrypoint

Author: lmrodriguezr

app/controllers/application_controller.rb

@@ -13,7 +13,7 @@ class ApplicationController < ActionController::Base
     ],
     authors: [Author, %i[given family], {}],
     names: [
-      Name, %i[name corrigendum_from],
+      Name, %i[name corrigendum_from gtdb_accession],
       {
         # TODO
         # This is ready to work, but it could return too much "trash", so
@@ -90,7 +90,7 @@ def short_link
       name = Name.where(id: $2).first or not_found
       redirect_to(name_path(name, par))
     when /\A(n:)?([a-z_\. ]+)\z/i
-      name = Name.find_by_variants($2.gsub('_', ' ')) or not_found
+      name = Name.find_by_variants($2) or not_found
       redirect_to(name_path(name, par))
     when /\A(r:.+)\z/i
       list = Register.where(accession: $1).first or not_found

app/models/name.rb

@@ -143,8 +143,10 @@ class << self
     def find_variants(name)
       name = name.strip.downcase.gsub(/^candidatus /, '')
       vars = [name, "candidatus #{name}"]
+      vars += vars.map { |i| i.gsub(/_+/, ' ') }
       Name.where('LOWER(name) IN (?, ?)', *vars)
           .or(Name.where('LOWER(corrigendum_from) IN (?, ?)', *vars))
+          .or(Name.where('LOWER(gtdb_accession) IN (?, ?)', *vars))
           .or(Name.where(
             id: Pseudonym.where('LOWER(pseudonym) IN (?, ?)', *vars)
                          .pluck(:name_id)