trips/environment.yml at main · scibiome/trips · GitHub

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name: trips_12
channels:
  - bioconda
  - conda-forge
  - defaults
dependencies:
  - _libgcc_mutex=0.1=conda_forge
  - _openmp_mutex=4.5=2_gnu
  - bzip2=1.0.8=hd590300_5
  - ca-certificates=2023.11.17=hbcca054_0
  - cycler=0.12.1=pyhd8ed1ab_0
  - freetype=2.12.1=h267a509_2
  - icu=67.1=he1b5a44_0
  - kiwisolver=1.4.5=py38h7f3f72f_1
  - ld_impl_linux-64=2.40=h41732ed_0
  - libblas=3.9.0=20_linux64_openblas
  - libcblas=3.9.0=20_linux64_openblas
  - libffi=3.4.2=h7f98852_5
  - libgcc-ng=13.2.0=h807b86a_3
  - libgfortran-ng=13.2.0=h69a702a_3
  - libgfortran5=13.2.0=ha4646dd_3
  - libgomp=13.2.0=h807b86a_3
  - liblapack=3.9.0=20_linux64_openblas
  - libnsl=2.0.1=hd590300_0
  - libopenblas=0.3.25=pthreads_h413a1c8_0
  - libpng=1.6.39=h753d276_0
  - libsqlite=3.44.2=h2797004_0
  - libstdcxx-ng=13.2.0=h7e041cc_3
  - libuuid=2.38.1=h0b41bf4_0
  - libxcrypt=4.4.36=hd590300_1
  - libzlib=1.2.13=hd590300_5
  - matplotlib=3.2.2=1
  - matplotlib-base=3.2.2=py38h5d868c9_1
  - ncurses=6.4=h59595ed_2
  - openssl=3.2.0=hd590300_1
  - pip=23.3.2=pyhd8ed1ab_0
  - pyparsing=3.1.1=pyhd8ed1ab_0
  - python=3.8.18=hd12c33a_1_cpython
  - python-dateutil=2.8.2=pyhd8ed1ab_0
  - python-tzdata=2023.4=pyhd8ed1ab_0
  - python_abi=3.8=4_cp38
  - pytz=2023.3.post1=pyhd8ed1ab_0
  - readline=8.2=h8228510_1
  - setuptools=69.0.3=pyhd8ed1ab_0
  - six=1.16.0=pyh6c4a22f_0
  - tk=8.6.13=noxft_h4845f30_101
  - tornado=6.3.3=py38h01eb140_1
  - wheel=0.42.0=pyhd8ed1ab_0
  - xz=5.2.6=h166bdaf_0
  - pip:
    - biothings-client==0.3.1
    - certifi==2023.11.17
    - charset-normalizer==3.3.2
    - decorator==5.1.1
    - domino-python==0.1.1
    - idna==3.6
    - mygene==3.2.2
    - networkx==2.4
    - numpy==1.18.1
    - pandas==1.0.1
    - pcst-fast==1.0.7
    - pybind11==2.11.1
    - python-louvain==0.14
    - scipy==1.4.1
    - statsmodels==0.11.0
    - urllib3==2.1.0
prefix: /home/giga/anaconda3/envs/trips_12